· Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003...

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Supplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure 3. CLUSTAL O(1.2.1) multiple sequence alignment GRMZM2G426242 ------------------------------------------------------------ GRMZM5G854655 ------------------------------------------------------------ GRMZM2G179063 ------------------------------------------------------------ GRMZM2G035755 ------------------------------------------------------------ GRMZM5G888620 ------------------------------------------------------------ GRMZM2G113653 ------------------------------------------------------------ GRMZM2G178209 ------------------------------------------------------------ GRMZM2G325014 ------------------------------------------------------------ GRMZM2G325023 ------------------------------------------------------------ GRMZM2G067361 ------------------------------------------------------------ GRMZM2G148277 ------------------------------------------------------------ GRMZM2G403740 ------------------------------------------------------------ GRMZM2G008935 ------------------------------------------------------------ GRMZM2G151332 ------------------------------------------------------------ GRMZM2G479038 ------------------------------------------------------------ GRMZM2G338465 ------------------------------------------------------------ GRMZM2G458776 ------------------------------------------------------------ GRMZM2G056335 ------------------------------------------------------------ GRMZM2G007012 ------------------------------------------------------------ GRMZM2G389944 ------------------------------------------------------------ GRMZM2G067424 ------------------------------------------------------------ GRMZM2G074395 ------------------------------------------------------------ GRMZM2G037545 ------------------------------------------------------------ GRMZM2G082037 ------------------------------------------------------------ GRMZM2G042865 ------------------------------------------------------------ GRMZM2G051474 ------------------------------------------------------------ GRMZM2G372068 ------------------------------------------------------------ GRMZM2G085854 ------------------------------------------------------------ GRMZM2G426415 ------------------------------------------------------------ GRMZM2G156026 ------------------------------------------------------------ GRMZM2G007795 ------------------------------------------------------------ GRMZM2G455075 ------------------------------------------------------------ GRMZM2G039129 MEVARQLYGRVT-----GEAVY-------------------VAEPVSAPARRGSPTK-GC GRMZM2G113794 MDHHAMCYGSKRISLSPGQKPKLPQ-------------T--SSLIVAAPAQKQRTEQ-GT GRMZM2G095261 ------------------------------------------------------------ GRMZM2G063550 ------------------------------------------------------------ GRMZM2G415973 ------------------------------------------------------------ GRMZM2G395508 ------------------------------------------------------------ GRMZM2G324466 ------------------------------------------------------------ GRMZM2G131928 ------------------------------------------------------------ GRMZM2G155911 ------------------------------------------------------------ GRMZM2G095807 ------------------------------------------------------------ GRMZM2G096412 ------------------------------------------------------------ GRMZM2G060993 ------------------------------------------------------------ GRMZM2G449019 ------------------------------------------------------------ GRMZM2G043295 ------------------------------------------------------------ GRMZM2G381025 ------------------------------------------MLFINANGQT--EL---- GRMZM2G122072 ------------------------------------------------------------ GRMZM2G051683 ------------------------------------------------------------ GRMZM2G010987 ------------------------------------------------------------

Transcript of · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003...

Page 1: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

Supplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003

Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure 3.

CLUSTAL O(1.2.1) multiple sequence alignment

GRMZM2G426242 ------------------------------------------------------------GRMZM5G854655 ------------------------------------------------------------GRMZM2G179063 ------------------------------------------------------------GRMZM2G035755 ------------------------------------------------------------GRMZM5G888620 ------------------------------------------------------------GRMZM2G113653 ------------------------------------------------------------GRMZM2G178209 ------------------------------------------------------------GRMZM2G325014 ------------------------------------------------------------GRMZM2G325023 ------------------------------------------------------------GRMZM2G067361 ------------------------------------------------------------GRMZM2G148277 ------------------------------------------------------------GRMZM2G403740 ------------------------------------------------------------GRMZM2G008935 ------------------------------------------------------------GRMZM2G151332 ------------------------------------------------------------GRMZM2G479038 ------------------------------------------------------------GRMZM2G338465 ------------------------------------------------------------GRMZM2G458776 ------------------------------------------------------------GRMZM2G056335 ------------------------------------------------------------GRMZM2G007012 ------------------------------------------------------------GRMZM2G389944 ------------------------------------------------------------GRMZM2G067424 ------------------------------------------------------------GRMZM2G074395 ------------------------------------------------------------GRMZM2G037545 ------------------------------------------------------------GRMZM2G082037 ------------------------------------------------------------GRMZM2G042865 ------------------------------------------------------------GRMZM2G051474 ------------------------------------------------------------GRMZM2G372068 ------------------------------------------------------------GRMZM2G085854 ------------------------------------------------------------GRMZM2G426415 ------------------------------------------------------------GRMZM2G156026 ------------------------------------------------------------GRMZM2G007795 ------------------------------------------------------------GRMZM2G455075 ------------------------------------------------------------GRMZM2G039129 MEVARQLYGRVT-----GEAVY-------------------VAEPVSAPARRGSPTK-GCGRMZM2G113794 MDHHAMCYGSKRISLSPGQKPKLPQ-------------T--SSLIVAAPAQKQRTEQ-GTGRMZM2G095261 ------------------------------------------------------------GRMZM2G063550 ------------------------------------------------------------GRMZM2G415973 ------------------------------------------------------------GRMZM2G395508 ------------------------------------------------------------GRMZM2G324466 ------------------------------------------------------------GRMZM2G131928 ------------------------------------------------------------GRMZM2G155911 ------------------------------------------------------------GRMZM2G095807 ------------------------------------------------------------GRMZM2G096412 ------------------------------------------------------------GRMZM2G060993 ------------------------------------------------------------GRMZM2G449019 ------------------------------------------------------------GRMZM2G043295 ------------------------------------------------------------GRMZM2G381025 ------------------------------------------MLFINANGQT--EL----GRMZM2G122072 ------------------------------------------------------------GRMZM2G051683 ------------------------------------------------------------GRMZM2G010987 ------------------------------------------------------------GRMZM2G130119 ------------------------------------------------------------GRMZM2G105991 ------------------------------------------------------------GRMZM2G058314 ------------------------------------------------------------AC206788.3_FGP015 ------------------------------------------------------------GRMZM2G036409 ------------------------------------------------------------GRMZM2G111344 ------------------------------------------------------------GRMZM2G163519 ------------------------------------------------------------GRMZM2G174192 ------------------------------------------------------------GRMZM2G061321 -----------------------------------------------------MSRS---GRMZM2G135722 ------------------------------------------------------------GRMZM2G061289 ------------------------------------------------------------GRMZM2G180283 ------------------------------------------------------------

Page 2: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

GRMZM2G066067 ------------------------------------------------------------GRMZM2G022266 ------------------------------------------------------------GRMZM2G162755 ------------------------------------------------------------GRMZM2G383404 ------------------------------------------------------------GRMZM2G162783 ------------------------------------------------------------GRMZM2G099740 ------------------------------------------------------------GRMZM2G154558 ------------------------------------------------------------GRMZM2G082249 ------------------------------------------------------------GRMZM2G159404 ------------------------------------------------------------GRMZM2G086925 ------------------------------------------------------------GRMZM2G075387 ------------------------------------------------------------GRMZM2G120016 ------------------------------------------------------------GRMZM2G168474 ------------------------------------------------------------GRMZM2G110511 ------------------------------------------------------------GRMZM2G160523 ------------------------------------------------------------GRMZM2G301148 ------------------------------------------------------------AC234524.1_FGP005 ------------------------------------------------------------GRMZM2G416045 ------------------------------------------------------------GRMZM2G343426 ------------------------------------------------------------GRMZM2G091176 -----------MLDLAEDPAPRTSSPSHLCAIRPPSPAAELPLLCLREPPRERESRSVAAGRMZM2G175910 ------------------------------------------------------------GRMZM2G006565 ------------------------------------------------------------GRMZM2G306328 ------------------------------------------------------------GRMZM2G085054 ------------------------------------------------------------GRMZM2G161335 ------------------------------------------------------------GRMZM5G815665 ----------------------------------------MDCVCIEA------------GRMZM2G097030 ------------------------------------------------------------GRMZM2G463996 ------------------------------------------------------------GRMZM2G156127 ------------------------------------------------------------GRMZM5G892627 ------------------------------------------------------------GRMZM2G173926 ------------------------------------------------------------GRMZM2G047910 ------------------------------------------------------------GRMZM2G117878 ------------------------------------------------------------GRMZM2G022242 ------------------------------------------------------------GRMZM2G165390 ------------------------------------------------------------GRMZM2G319965 ------------------------------------------------------------GRMZM5G832805 ------------------------------------------------------------GRMZM5G896260 ------------------------------------------------------------GRMZM2G106443 ------------------------------------------------------------GRMZM2G475884 ------------------------------------------------------------GRMZM2G344993 ------------------------------------------------------------GRMZM2G316030 ------------------------------------------------------------GRMZM2G363554 ------------------------------------------------------------GRMZM2G457929 ------------------------------------------------------------GRMZM2G050748 ------------------------------------------------------------GRMZM2G304712 ------------------------------------------------------------GRMZM2G417945 ------------------------------------------------------------GRMZM2G022101 ------------------------------------------------------------GRMZM2G055446 ------------------------------------------------------------GRMZM2G073244 ------------------------------------------------------------GRMZM2G024131 ------------------------------------------------------------AC199541.4_FGP007 ------------------------------------------------------------AC199541.4_FGP001 ------------------------------------------------------------AC199541.4_FGP004 ------------------------------------------------------------AC199541.4_FGP002 ------------------------------------------------------------GRMZM2G334336 ------------------------------------------------------------GRMZM2G095280 ------------------------------------------------------------GRMZM2G035282 ------------------------------------------------------------GRMZM2G063042 ------------------------------------------------------------GRMZM2G171548 ------------------------------------------------------------GRMZM2G022212 ------------------------------------------------------------GRMZM2G078465 ------------------------------------------------------------GRMZM2G110816 ------------------------------------------------------------GRMZM2G159918 ------------------------------------------------------------GRMZM2G021786 ------------------------------------------------------------GRMZM2G432291 ------------------------------------------------------------GRMZM2G098892 ------------------------------------------------------------GRMZM2G098890 ------------------------------------------------------------GRMZM2G328224 ------------------------------------------------------------GRMZM2G031138 ------------------------------------------------------------GRMZM2G030821 ------------------------------------------------------------

Page 3: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

GRMZM2G130256 ------------------------------------------------------------GRMZM2G363545 ------------------------------------------------------------GRMZM2G128504 ------------------------------------------------------------GRMZM2G046994 ------------------------------------------------------------GRMZM2G004858 ------------------------------------------------------------GRMZM2G073376 ------------------------------------------------------------GRMZM2G440902 ------------------------------------------------------------GRMZM2G173315 ------------------------------------------------------------GRMZM2G337048 ------------------------------------------------------------GRMZM5G834303 ------------------------------------------------------------GRMZM2G083130 ------------------------------------------------------------GRMZM2G476049 ------------------------------------------------------------GRMZM2G049798 ------------------------------------------------------------GRMZM2G118657 ------------------------------------------------------------GRMZM2G169628 ------------------------------------------------------------GRMZM2G470524 ------------------------------------------------------------GRMZM2G089241 ------------------------------------------------------------GRMZM2G373124 ------------------------------------------------------------GRMZM2G083935 ------------------------------------------------------------GRMZM2G041699 ------------------------------------------------------------GRMZM2G132706 ------------------------------------------------------------GRMZM2G009125 ------------------------------------------------------------GRMZM5G870067 ------------------------------------------------------------

GRMZM2G426242 ------------------------------------------------------------GRMZM5G854655 ------------------------------------------------------------GRMZM2G179063 ------------------------------------------------------------GRMZM2G035755 ------------------------------------------------------------GRMZM5G888620 ------------------------------------------------------------GRMZM2G113653 ------------------------------------MPIS-------AM---RP------GRMZM2G178209 ------------------------------------MAAAAASAT--QA---AL------GRMZM2G325014 ------------------------------------------------------------GRMZM2G325023 ------------------------------------MSAG--------------------GRMZM2G067361 ------------------------------------MA--IEDVA--N-----G------GRMZM2G148277 ------------------------------------------------------------GRMZM2G403740 ------------------------------------MGSQGQAAT--N-----G------GRMZM2G008935 ------------------------------------MAPT-------------D------GRMZM2G151332 ------------------------------------------------------------GRMZM2G479038 ------------------------------------------------------------GRMZM2G338465 ------------------------------------------------------------GRMZM2G458776 ------------------------------------------------------------GRMZM2G056335 ------------------------------------------------------------GRMZM2G007012 ------------------------------------------------------------GRMZM2G389944 ------------------------------------------------------------GRMZM2G067424 ------------------------------------------------M---SQ------GRMZM2G074395 ------------------------------------------------M---AA------GRMZM2G037545 ------------------------------------MQIL---DR--TS---RQ------GRMZM2G082037 ------------------------------------------------------------GRMZM2G042865 ------------------------------------------------------------GRMZM2G051474 -----------------------------------------------MGPAC--------GRMZM2G372068 ------------------------------------------------------------GRMZM2G085854 ------------------------------------MENAN-------ASSC--------GRMZM2G426415 ---------------------------MDN---GGSNGSAT-------ASAC--------GRMZM2G156026 ------------------------------------MASLAT-----STPAA--------GRMZM2G007795 ------------------------------------------------------------GRMZM2G455075 ------------------------------------------------------------GRMZM2G039129 L--GA---------M--------RLV-A---GPRRKGDQVVC-----LGFDMRNT-----GRMZM2G113794 L--NRNIENRFGVKIR--VVYCSPAL-T---YQSRSNDELAC-----IITSLATSLTHPVGRMZM2G095261 ------------------------------------------------------------GRMZM2G063550 ------------------------------------------------------------GRMZM2G415973 ------------------------------------------------------------GRMZM2G395508 ------------------------------------------------------------GRMZM2G324466 ------------------------------------------------------------GRMZM2G131928 ------------------------------------------------------------GRMZM2G155911 ------------------------------------------------------------GRMZM2G095807 ------------------------------------------------------------GRMZM2G096412 ------------------------------------------------------------GRMZM2G060993 ------------------------------------------------------------GRMZM2G449019 ------------------------------------------------------------GRMZM2G043295 ------------------------------------------------------------

Page 4: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

GRMZM2G381025 ------------------PGACHRSR-KSQGQSRFPNPNQSC-----ATARCA-------GRMZM2G122072 ------------------------------------------------------------GRMZM2G051683 -----------------------------------------------------MGGE---GRMZM2G010987 --------------------------------------------------------M---GRMZM2G130119 ------------------------------------------------------------GRMZM2G105991 ------------------------------------------------------------GRMZM2G058314 ------------------------------------------------------------AC206788.3_FGP015 ------------------------------------------------------------GRMZM2G036409 ------------------------------------------------------------GRMZM2G111344 -------------------------------MAAPYVHTYAC-----LVFHCAIGIP---GRMZM2G163519 ------------------------------------------------------------GRMZM2G174192 ------------------------------------------------------------GRMZM2G061321 --------------LRTNKTAIISSV--SFKQLFFLLLDS---KP--IPFT--E------GRMZM2G135722 ------------------------------------------------------------GRMZM2G061289 ------------------------------------------------------------GRMZM2G180283 ------------------------------------------------------------GRMZM2G066067 ------------------------------------------------------------GRMZM2G022266 ------------------------------------------------------------GRMZM2G162755 -----------------------------------MAPP----PA--M------------GRMZM2G383404 ------------------------------------MAP----PA--T------------GRMZM2G162783 ------------------------------------------------------------GRMZM2G099740 ------------------------------------MSS----PA--P------------GRMZM2G154558 ------------------------------------------------------------GRMZM2G082249 ------------------------------------------------------------GRMZM2G159404 ------------------------------------------------------------GRMZM2G086925 ------------------------------------------------------------GRMZM2G075387 ------------------------------------------------------------GRMZM2G120016 ----------------------------------------MEPAN--RGTA--C------GRMZM2G168474 ------------------------------------------------------------GRMZM2G110511 ------------------------------------------------------------GRMZM2G160523 ------------------------------------------------------------GRMZM2G301148 ------------------------------------------------MAT--H------AC234524.1_FGP005 ------------------------------------MATSTTTNG--AGAT--A------GRMZM2G416045 ------------------------------------------------------------GRMZM2G343426 ------------------------------------------------------------GRMZM2G091176 VRTLGSIDWVSGVRQRSREPAVVSTGEVVIGARGDFMPESELR----RGFR--C------GRMZM2G175910 ------------------------------------------------------------GRMZM2G006565 ------------------------------------MASSAPAPA--STLP--C------GRMZM2G306328 ------------------------------------MASSAPAPA--STLP--C------GRMZM2G085054 ------------------------------------------------------------GRMZM2G161335 ------------------------------------------------------------GRMZM5G815665 -----------------HTFLQIPSLSVDL----ALQQPRSIGKSRWAM-----------GRMZM2G097030 ------------------------------------------------M-----------GRMZM2G463996 ------------------------------------MATAAVP----AS-----------GRMZM2G156127 -----------------------------------------MG----SI-----------GRMZM5G892627 -----------------------------------------MG----SV-----------GRMZM2G173926 ----------------------------------------MAG----AQ-----------GRMZM2G047910 ----------------------------------------MAG----AQ-----------GRMZM2G117878 ------------------------------------------------M-----------GRMZM2G022242 ------------------------------------------------------------GRMZM2G165390 ------------------------------------------------------------GRMZM2G319965 ------------------------------------MAPLAND-E--------D------GRMZM5G832805 ----------------------------------------MAG-E--------E------GRMZM5G896260 ------------------------------------------------------------GRMZM2G106443 ---------------------------------------MADK-Q--------E------GRMZM2G475884 ---------------------------------------MVSS-P--------D------GRMZM2G344993 ------------------------------------------------------------GRMZM2G316030 ------------------------------------------------------------GRMZM2G363554 ------------------------------------MPAMVE--E--------G------GRMZM2G457929 ------------------------------------MPAMVVE-E--------D------GRMZM2G050748 ------------------------------------------------------------GRMZM2G304712 ---------------------------------------MGEE-AAAAT-----------GRMZM2G417945 ---------------------------------------MGEE-EGAPT-----------GRMZM2G022101 ------------------------------------------------------------GRMZM2G055446 ------------------------------------------------------------GRMZM2G073244 ---------------------------------------MSQE----ST-----------GRMZM2G024131 ------------------------------------------------------------AC199541.4_FGP007 ---------------------------------------ME------SS-SAAT------AC199541.4_FGP001 -----------------------------------------------------M------AC199541.4_FGP004 -----------------------------------------------------M------AC199541.4_FGP002 -----------------------------------------------------M------

Page 5: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

GRMZM2G334336 ---------------------------------------MGCT-TTSATS--SS------GRMZM2G095280 ---------------------------------------MGST-STSATS--SS------GRMZM2G035282 ---------------------------------------MGST-S-----ATGT------GRMZM2G063042 ---------------------------------------MGGK-KIPSTTSCSP------GRMZM2G171548 ---------------------------------------MGMD-S--------Y------GRMZM2G022212 ------------------------------------------------------------GRMZM2G078465 ------------------------------------------------------------GRMZM2G110816 ------------------------------------------------------------GRMZM2G159918 ------------------------------------------------M-----------GRMZM2G021786 ------------------------------------------------M-----------GRMZM2G432291 ------------------------------------------------M-----------GRMZM2G098892 ------------------------------------------------------------GRMZM2G098890 ------------------------------------------------------------GRMZM2G328224 ------------------------------------------------------------GRMZM2G031138 ------------------------------------------------------------GRMZM2G030821 ------------------------------------------------------------GRMZM2G130256 ------------------------------------------------------------GRMZM2G363545 ------------------------------------------------------------GRMZM2G128504 ------------------------------------------------------------GRMZM2G046994 ------------------------------------------------------------GRMZM2G004858 ------------------------------------------------------------GRMZM2G073376 ------------------------------------------------------------GRMZM2G440902 ------------------------------------------------------------GRMZM2G173315 ---------------------------------------MGQE---EAV-----------GRMZM2G337048 ---------------------------------------MAQG-----------------GRMZM5G834303 ------------------------------------------------------------GRMZM2G083130 ------------------------------------------------------------GRMZM2G476049 ------------------------------------------------------------GRMZM2G049798 ------------------------------------------------------------GRMZM2G118657 ------------------------------------------------------------GRMZM2G169628 ---------------------------------------------M--------------GRMZM2G470524 ----------------------------------------MQG-KT--------------GRMZM2G089241 ---------------------------------------------MDST-----------GRMZM2G373124 ---------------------------------------------MGSV-----------GRMZM2G083935 ---------------------------------------------MGSL-----------GRMZM2G041699 ---------------------------------------------MGSL-----------GRMZM2G132706 -----------------MLVYTAQARSNSI----PSLVPGGQR-RQADM-----------GRMZM2G009125 ------------------------------------------------M-----------GRMZM5G870067 ------------------------------------------------M-----------

GRMZM2G426242 ----METAAAPTLAPHVLVVPFP-A-QGHALPLLDFAGLLAARGL-----------RLTVGRMZM5G854655 ------MEATLCPKPHFVVIPWP-A-TSHMIPIVDIGCLLAAHGA-----------AVTIGRMZM2G179063 -------MERATADPHFLLLPWQ-GAISHIIPMTDIGRLLASHGA-----------AVTIGRMZM2G035755 --------MDRAAKPHFALIPFT-GTISHVIPMADLGCLLAAHGA-----------EVTIGRMZM5G888620 -----MAIKDEPQPLHILFFPFL-A-PGHLIPIADMAALFAARGV-----------RCTIGRMZM2G113653 -SPSSVASSGDTAAPRMYFIPFP-T-PGHALPMSDLARLFASRGA-----------DTTLGRMZM2G178209 -ALAHDLEDASERKAHFVLVPLM-A-QGHTIPMTDMACLLARHGA-----------RVSFGRMZM2G325014 -------------MPHFVLVPML-A-AGHAGPMLDMARALASRGA-----------LVTFGRMZM2G325023 ---SAAAVPGTNSAAHFVLVPMM-A-AGHTGPMLDMARTLSGRGA-----------LVTFGRMZM2G067361 -RPTA-NGSGCDVKAHFVFIPLM-F-QGHLIPAVDTALLLATHGA-----------LASIGRMZM2G148277 ------------------------------------------------------------GRMZM2G403740 -RGDDTGGGRTQQAAHFVFVPLM-A-QGHLIPAVDTALLLSTHGA-----------VCTVGRMZM2G008935 -ESAADTPAPPPPPPHFVIVPLV-A-QGHTIPMVDLALLLAERGA-----------RASLGRMZM2G151332 --------------------------------MVDLALLLAERGA-----------RASLGRMZM2G479038 -----------MAGLHFVLVPLL-A-QGHIIPMVDLARLLAGRGA-----------RVSVGRMZM2G338465 -----------MAGLHFLLVPLV-A-QGHIIPMVDLARLLAGRGA-----------RVTVGRMZM2G458776 -MTATANTTAMAAELHFVLVPVM-A-QGHLLPMLDLARLIAGHGA-----------RVTVGRMZM2G056335 ----------MSTAPHFVLVPLL-A-QGHMIPTMDLARLIASQGA-----------RVTVGRMZM2G007012 ---------MAEAAPHFVLVPML-A-QGHLLPMLDLARVLASHGA-----------RATVGRMZM2G389944 ---------MAAAAPHFVLVPML-A-QGHLLPMLDLARLIASHGA-----------RATVGRMZM2G067424 ---SEPERSHADSPLHLVFVPFL-E-RSHFAPLAAKAASSAAAGA-----------EHEVGRMZM2G074395 -AVDTAAVAGATGRLRVFFLPSF-I-RGHLIPQTDMACRVAAARPA--------EVEATVGRMZM2G037545 -QEMATETAMPRKKMRILLMPFF-A-TSHIAPFTDLAFHLVAARPD--------DVEATVGRMZM2G082037 -----MASAKQSKKTRILVIPFF-A-SSHIGPHTDFAVRLAAARPG--------VVEPTVGRMZM2G042865 -----MASAKQSKKMRILLIPFF-A-TSHIGPYIDFAVRLAAARPG--------AVEPTVGRMZM2G051474 ---------KTAARPRVLLLCSP-C-MGHLIPFAELARRLVADH-GL---------STTLGRMZM2G372068 ---------MKAGPPHVAMLATP-G-MGHLIPLAELAKRLAARR-GA---------TATLGRMZM2G085854 ----RNGDGTQTPPPHVAMLATP-G-MGHLIPLAELAKRLAQRH-GV---------TSTLGRMZM2G426415 ----CN--GKINRGPHVAMLATP-G-MGHLIPLAELAKRLASRH-GA---------TATLGRMZM2G156026 ----AAGPRPRPDRPHVVLVPSP-G-VGHLMPMAELARRLVSHH-AL---------AATL

Page 6: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

GRMZM2G007795 -------MEKLPSQQQVVLLASP-G-AGHLIPMVELAQRLAADH-GF---------AVTLGRMZM2G455075 -----------MPSPTIVLLPMW-A-TGHFSSMLEAGKRLLFCS-AGR----TAAYSLTVGRMZM2G039129 ------VCSSNGCYPTIVLVHVW-G-IGHFVPMLE-------------------------GRMZM2G113794 SCRTRNVDPAMAATPTIVLVPVW-G-IGHFVPMLEVGKRLLARS-AL-------PLTVTVGRMZM2G095261 -----------MATPALVLLPEW-G-SGHLMSMLESCKRVLLSS-SG-----GKAFSITLGRMZM2G063550 --------MAATAYPTVVLIPLC-V-PGHLASMIEAGKRLLGRS-RC-------PMSLTVGRMZM2G415973 -----------MAAPTVVLIPFC-V-TGHLTSMLQAGKRMLMSG-GG-----DLAMSLTVGRMZM2G395508 -----------MASLNVLLLPEP-G-SGHLMSLIEAGKRLLGHG-AGGGDGLGREFTVTVGRMZM2G324466 -----------MATPTVVLLPVW-G-AGHLMPMLEAGKRLLGSV-GG-----GRALSVTVGRMZM2G131928 -----------MATPTVVLLPVW-G-AGHLMPMLEAGKRLLGSV-GG-----GRALSVTVGRMZM2G155911 -----------MAAPTVVLLPVW-G-AGHLMSMLDAGKRLLT---RG-----GRALSLTVGRMZM2G095807 ------------MKKTVVLYPGL-A-VSHFMPMMQLADVLLEEG-Y----------AVVVGRMZM2G096412 ------------MEKTVVLYPGL-S-VSHFVPMMQLADMFLEEG-Y----------AVAVGRMZM2G060993 ---------MQAIKKTIVLYPGL-F-VSHFVPMMQLADVLLEEG-Y----------AVAVGRMZM2G449019 ------------MKQSVVLYPSA-G-TGHVVPMAELAKVFINHG-F----------DVTMGRMZM2G043295 ----------MKQQQTVILYPSP-G-VGHIVPMVQLAKVFLRHG-C----------DVTMGRMZM2G381025 ---RASEMDDVSVKQIAVLYPVG-G-VGHVGPMTQLAKVFLHHG-Y----------DVTMGRMZM2G122072 ----MDDVVPATAKQTVVLYPGG-G-AGHVAPMTQLAKVFVRHG-Y----------DVTMGRMZM2G051683 -ME-ATAAETGLAQRPVVLYPSP-G-MGHLVSMIELGKLLGARG-L----------PVTIGRMZM2G010987 -EA-AAAAETGLAQKPVVLYPSP-G-MGHLVSMIELGKILGARG-L----------SVIIGRMZM2G130119 ------------MGSVVVLYSWM-V-RGHLHPMVQLADRLAGHG-V----------PITMGRMZM2G105991 -----------MEKTTVVLYPGA-G-VGHLAPMLELAKALLRHA-GD-------QVDVAIGRMZM2G058314 -------MAEPSPHPTVVLHACL-G-VGHLIPMVELAKLLLRRD-L----------AVIIAC206788.3_FGP015 --------MVTGKKRTFVLYPSL-G-VGHLIPMVELAKHLLRHG-H----------GALIGRMZM2G036409 ----------MTQEKTVVLYPSL-G-VGHLNPMAQLAKAILRHG-SV---------AVTIGRMZM2G111344 -TSRTACLKAVMAHKTVILYPSL-G-VGHLNPMVELAKVFLRRG-M----------AVVMGRMZM2G163519 ------MAQAEREHLSVVMFPWL-A-HGHITPYLELARRLTS--ED----GGDVDVTVHLGRMZM2G174192 ------MAQMEREHLSVVMFPWL-A-HGHVTPYLELARRLTS--AN----DADIDVTVHLGRMZM2G061321 -LSPSAMGDANGGSMHVVMLPWL-A-FGHILPFTELAKRIAR--QG---------HRVTLGRMZM2G135722 ------MDARSSSSMHVVMLPWL-A-FGHILPFTELAKRIAR--QG---------HRVTLGRMZM2G061289 --------MDARSSMHVVMLPWL-A-FGHILPFTELAKRIAR--QG---------HRVTLGRMZM2G180283 ------MAAADSSPLHIVIFPWL-A-FGHLIPGLEFAERLAE--HG---------QRVSFGRMZM2G066067 ----MDAASSSAAPLRLVIFPWL-G-FGHLLPYLELAERLAL--RG---------HRVSFGRMZM2G022266 --MDAATGNCSSSPLRIVICPWL-A-FGHMLPCLELAERLAS--RG---------HRVSFGRMZM2G162755 -QSPGELNDGAYDAPHILFIPSA-G-IGHLTPVFRVIAGF-S-SRG---------IDVSVGRMZM2G383404 -NSPGEVDSGG--RPHVMFIPSA-G-MGHLIPFFRFIAAL-A-GQS---------VDISVGRMZM2G162783 --MAANGGDHTSARPHVVLLPSA-G-MGHLVPFARLAVALSE-GHG---------CNVSVGRMZM2G099740 -SSPSRSSHGSRSSPRIVLFPSA-G-MGHLVPFTRLAVALSA-GHG---------CDISLGRMZM2G154558 -------MVGTEHPVHVVLFPFM-A-QGHVAPFRFLAELVRRARPD---------ASITIGRMZM2G082249 -----MAAVEAKRSPHFVLFPFL-A-HGHVPVFLRLAGLLRALRPG---------LEVTLGRMZM2G159404 -------MAAAAAAKHVVLFPFP-G-QGHLSAFMSLAGLLHSALPD---------AAITFGRMZM2G086925 ---------MPMESVAVVAVPFP-A-QGHLNALLHLSLQLAA--RG---------VPVHYGRMZM2G075387 ---------MDPAAVAIVTVPFP-A-QGHLNQLLHLSLLLAS--RG---------LPVHFGRMZM2G120016 -PLRSEMSM-ESVAVAVVAVPFP-A-QGHLNGMLHLSLLLAS--RG---------LSVHYGRMZM2G168474 ------MAVDTMESVAVVAVPFP-A-QGHLNQLLHLSLLLAS--RG---------LSVHYGRMZM2G110511 ------MAVDTMESVAVVAVPFP-A-QGHLNQLLHLSLLLAS--RG---------LSVHYGRMZM2G160523 ----MEAAPTPEPGPHVLVIPFP-A-QGHALPLIDFVALLAA--RG---------LRLTVGRMZM2G301148 -TPQPQDLASNGGDPHVLLVPYP-A-QGHMLPLLDLATLLAE--RG---------LAVTVAC234524.1_FGP005 -ANHGANGAPAAGRDHVVIFPFM-A-KGHTLPLVHFATALSVHHKS---------LSVTLGRMZM2G416045 ------------------------------------------------------------GRMZM2G343426 ------------------------------------------------------------GRMZM2G091176 -APRADYFAAVAGRDHVVIFPFM-A-KGHMLPLLHFATALSAQHGR---------LRVTLGRMZM2G175910 ----MTTSPVPSQADHVAIFPLM-A-KGHTMPLLDLACVLRG-RGL---------AAVTFGRMZM2G006565 ----SGAHDAQAELPHIVIFPFM-L-KSHTIPLTDLAHQLRR-RQM---------ATVTFGRMZM2G306328 ----SEAHDAQAQLPHVVIFPFM-A-KSHTIPLADLAHLLRR-RQM---------ATVTFGRMZM2G085054 --------MAASCGGRVVVFPFP-F-QGHFNPVMRLARALHARG-----------VGITVGRMZM2G161335 ---MASSRTGAGAGGRVVVFPFP-F-QGHFNPVMRLARALHARG-----------LAITVGRMZM5G815665 --A-GQ----EHRCRRIVLFPLP-F-QGHISPMLQLAELLHARG-----------LAVTVGRMZM2G097030 --A-GD-DGRAPSGLRVVMFPFP-F-WSHINQMLQLGKLLRARG-----------LGVTMGRMZM2G463996 --RTGSGGVVRRRRRRVLMFPLP-F-QGHLNPMLQLAGALHARG-G---------LDITVGRMZM2G156127 --GGHTTTATADRRRRVLFFPLP-Y-QGHINPMFQLAGLLHLRG-----------FSVTVGRMZM5G892627 --GQ----TATGHRRRVLFFSLP-Y-QGHINPMFQLAGLLHARG-----------FAVTVGRMZM2G173926 --EAGDAPGHQPCARRVLVFPLP-F-QGHIDPMLHLAGVLHARG-----------LAVTVGRMZM2G047910 --EAGDAPGHQPCARRVLVFPLP-F-QGHIDPMLHLAGVLHARG-----------LAVTVGRMZM2G117878 --AEGDGPT-PARGARVVLFPLP-S-QGHLSPMLHLASALHARG-----------LAVTVGRMZM2G022242 ---------MGSPLPHVAVVAFP-F-TSHAPKVLMVARALATAA-----------PSATFGRMZM2G165390 ---MAPADGESSPPPHVAVVAFP-F-SSHAAVLLSIARALAAAA-A--------PSGATLGRMZM2G319965 -HKI----YGEGCGSHFLVVAYS-I-QGHVNPARTLAHRLAQTS-G---------CTATLGRMZM5G832805 -HQQ----HSSHYGHHFLVVAYG-M-QGHVNPARALAHRLAKLS-DV---VGGCPILATLGRMZM5G896260 ------------------------------------------------------------GRMZM2G106443 -HQQ----QPHGHGHHFLVVAYG-M-QSHVNPGRALAHRLARLS-C----IDGRPILATL

Page 7: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

GRMZM2G475884 -SVPARSRPMATIQDHFLFVTDP-M-QSHINPARRLAVRVAAAM-P--------NARVTFGRMZM2G344993 ----------MSPRPHFLVLTFP-F-QGHIAPALRLARQLLAAA-P--------DALVTFGRMZM2G316030 ------MAAKHYQQHHFLIVTYP-A-QGHITPARHLARRLGSVC-R--------GARVTIGRMZM2G363554 -L-V----RRAAPEPHFLVVTFP-A-QGHINPARHLARRLLR-A-T--------GARVTVGRMZM2G457929 -L-IRGAAPEPEPEPHLLVVTFP-A-QGHINPARHLARRLLR-A-T--------GARVTVGRMZM2G050748 -----MAEEVTPHNIHILLICYP-S-QGHINPMLRLAKRIAA-K-G---------ILVTCGRMZM2G304712 ---ATATVAAGNAPPHLLLVCFP-G-QGHVNPMVRLAKRIAA-K-G---------PLVTFGRMZM2G417945 -----VAAAAESAPPHLLLICFP-G-QGHVNPMLRLAKRIAA-K-G---------LLVTFGRMZM2G022101 ---------MSSQPPHVLLVSFP-L-QGHVNPLLRLGARLAA-K-G---------LLVTFGRMZM2G055446 ---------MSSRVPHVLLVSAP-L-QGHVNPLLVLGRHLAS-R-G---------LLVTFGRMZM2G073244 ---PACHAVVAPPPPHVLLVSAP-F-QGHVNPLLALGQRLAS-M-G---------LLVTFGRMZM2G024131 ------------MAPHVLVVPFP-G-QGHMNPMVQFAKRLAS-K-G---------VATTLAC199541.4_FGP007 -TMTGSSSGREHGGVHVLLVPLP-A-QGHMNPMIQFGRRLAY-H-G---------LIPTLAC199541.4_FGP001 -DDGAATTIVQGGDAHVLLLPFPGM-QGHANPMLQLGRRLAF-H-G---------LRPTLAC199541.4_FGP004 -DDGAATTIVQGGDAHVLLLPFPGM-QGHANPMLQLGRRLAF-H-G---------LRPTLAC199541.4_FGP002 -DDGAATTIVQGGDAHVLLLPFPGM-QGHANPMLQLGRRLAF-H-G---------LRPTLGRMZM2G334336 ------SSAASGGGAHVLLPPYPGA-QGHTNPLLQFGRRLAY-H-G---------FRPTLGRMZM2G095280 -SSSAASGPGGGGGAHVLLLPYPGA-QGHTNPLLQFGRRLAY-H-G---------FRPTLGRMZM2G035282 -TSSSSSAAHGGGAAHVLLLPYPGA-QGHTNPLLQFGRCLAY-H-G---------LRPTLGRMZM2G063042 -LPSTDSDHRGISDGHVLLLPYPGA-QGHTNPLLQFGRRLAY-H-G---------LHPTLGRMZM2G171548 -AGENEPKVGSGVGSHVLLLPYP-S-QGHVHPMLQFGKRLAY-Y-G---------LRPTLGRMZM2G022212 -----MAERVSQHIVHVLLLPNP-T-QGHINPILEFGKRLAAHR-G---------VQCTLGRMZM2G078465 ------MARPSDQSVHVLLLPFP-T-QGHINPLLQFGKRLAGRA-G---------VRCTLGRMZM2G110816 ---------MAAELTQIVVVPFP-A-QGHVTPMLHLARAIVDRGHG--------SISATVGRMZM2G159918 -G-----VESTQAKRAMVFVPFP-A-QGHITPMIYLARALAVR--G--------GITATVGRMZM2G021786 -GAE------AVAYPAVLLVPFP-A-QGHITPMLQLAGVLAAHG-----------VAPTVGRMZM2G432291 -GAKAEHVAVCPAAATVVLVPFP-A-QGHISPMLRLARALAERG-----------VAAIVGRMZM2G098892 -------MAAAPHRPRVMMLPFA-A-QGHVMPLMELSHRLVEH--G---------FEVVFGRMZM2G098890 -------MAAAPPRPRVMVLPFP-A-QGHVMPLMELSHRLVDH--G---------FEVDFGRMZM2G328224 ---------MVMAAPRVLVLPYP-A-QGHVIPMMELSHCLIEH--G---------VKVTFGRMZM2G031138 ----------MAPKAHVLVLPMP-C-QGHVTPLMELSHLLVDQ--G---------FEVTFGRMZM2G030821 -------MGTPTAAPHVMVLPFP-A-QGHVTPLMELSHRLVDR--G---------FQVTFGRMZM2G130256 ----------MASSTHALFIPYP-A-QGHVLPLLELAYRFADH--G---------FAVTFGRMZM2G363545 ----MGADAARTPAPHALLLPYP-A-QGHVIPFMELADRLLDR--G---------FAVTFGRMZM2G128504 ---------MAPPSPHALVIPYP-A-QGHVIPLLELAHALVDR--G---------FTVTFGRMZM2G046994 ----------MAPPPHALVIPYP-A-QGHVIPLLELAHALVDR--G---------FTVTFGRMZM2G004858 -------MATAAAARHVVAVPYP-G-RGHVNPMLVVCRLLAAAD-A--------ALSVTVGRMZM2G073376 --MAAAAGGTGGCGCHIVAVPFP-G-RGHVNAMMNLSRLLAAR--G---------AAVTFGRMZM2G440902 ------MGSTAAAPCHIVAVPYP-G-RGHVNAMLNLCRLLAARD-G---------VTITIGRMZM2G173315 -AANGTGTGVGRGRPHAVVMPYP-L-QGHVIPAVHLALRLAER--G---------FAVTFGRMZM2G337048 -AAGVVDTRRHGGKPHAVVVAYP-L-QGHVIPVVHLALRLAAR--G---------FAVTFGRMZM5G834303 --------MAAAAAAHVLVFPAP-A-QGHLNSFLHFSTGLLRA--G---------LHVTFGRMZM2G083130 -----MPSTTAQQKPHVVLVPFP-A-HGHIAPHVQLARALRAR--G---------VHATLGRMZM2G476049 ------------------------------------------------------------GRMZM2G049798 -----------MARPHVVVVPYP-C-SGNINPALQIARLLHRH--G---------VYVTFGRMZM2G118657 ----------MERRAHAMLFPFP-C-PGHINPTLKLADLLHAR--G---------VHVTFGRMZM2G169628 ------SSGKAQRRPHAVLIPQP-A-QGHVTPMLHLAKALHAR--G---------FRVTYGRMZM2G470524 ------SMMGSNARPHAVLIPYP-A-QGHVTPLLQLAKVLHSR--G---------FFVTYGRMZM2G089241 -EPEVAAATVEMMPPHVVCVPYP-A-QGHVTPMLKLAKLLHAR--G---------FHVTMGRMZM2G373124 -PPAEGDRRQPQQQPHVVMIPYP-A-QGHVTPMLQLAKLLHTR--G---------FHVTFGRMZM2G083935 -PPVDGQRR----PPHVVMIPYP-A-QGHITPMLQFAKLLHTR--G---------FHVTFGRMZM2G041699 -G---SAAQQQPQQPHAVCLPYP-A-QGHITPMLNVAKLLHAR--G---------FHVTFGRMZM2G132706 -S---AATLPPGQEPHAVCVPFP-A-QGHITPMLKLAKILHAR--G---------FRVTFGRMZM2G009125 -G---SIVADADRRPHAVCVPFP-A-QGHVTPMLKLAKVLHSR--G---------FHITFGRMZM5G870067 -G---SVAADAAGKPHAVLVPFP-A-QGHVTPMLKLAKILHCR--G---------FHVTF

GRMZM2G426242 V--TSP-ANLPLLSPFLAAHPG-----------------------AVTPLTLPFPS--S-GRMZM5G854655 I--TTP-SSSQLVQSRVDRAG-------------------Q-GSAGVTVTAIPFPG--AEGRMZM2G179063 I--TTP-ANALLVQSRVEDLAA-----------ALHRPHGHGAAGTITVTAIPFPA--AEGRMZM2G035755 I--TTP-VNAAIAQSRVD------------------RAQSHGATTTITVTAVPFPA--ADGRMZM5G888620 L--TTP-VNAQLIRSAVDRAND-----------AS---RGTEGALAIDIAVVPF----PDGRMZM2G113653 V--LTR-GNAARLGGPVARAAA--------------------TGLRIRIVALTLPA--EAGRMZM2G178209 V--TTP-LNASRIAGLIDHAAA--------------------AGLAIRFVRLRFPA--AEGRMZM2G325014 V--TTP-LNLLRLGRA---PGD--------------------GELPIRFLPLRFPC--TEGRMZM2G325023 V--TTP-LNLPRLGRA---PSD--------------------GALPIRFLPLRFPC--AEGRMZM2G067361 V--VTP-SNTGRIRPTVDFARK--------------------SGLAVRLVELPLDL--AAGRMZM2G148277 ------------------------------------------------------------GRMZM2G403740 V--GTP-ASAARVRPTIESARQ--------------------SGLPVRLLEFPLDY--AGGRMZM2G008935 V--TTP-LNGARLRGVAEQAAR--------------------AKLPLEIVELPFPT--DVGRMZM2G151332 V--TTP-LNGARLRGVAEQAAR--------------------AKLPLEIVELPFPT--DV

Page 8: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

GRMZM2G479038 V--TTP-VNAARNGAVVESARR--------------------AGLDVELAEVAFPG--PGGRMZM2G338465 V--TTP-VNAARNRAVVESARR--------------------AGLDVEVAEIAFPG--PGGRMZM2G458776 V--LTP-VNAARSRPFLEHAAR--------------------AGLAVEFVEFAFPG--PAGRMZM2G056335 V--LTP-VNAARHRAVLEHDTR--------------------AGLAIDFAELAFPG--PAGRMZM2G007012 V--LTP-VNAARNRDFLEQAAG--------------------AGLTINFAELAFPG--PAGRMZM2G389944 V--LTP-INAARNRAFLEQAAR--------------------AGLTINFAELAFPG--PAGRMZM2G067424 A--ATT-TAAIVTTAHFAA----------------------LAPASVPVHAAPLRC--P-GRMZM2G074395 V--VTP-ANAALIAPTVARAA--------------------AAGHAVRVLCYPFPD--V-GRMZM2G037545 A--VTP-ANALVVQSALARRGA-------------------SHLATVKVATYPFPS--V-GRMZM2G082037 A--VTP-ANVTVVRSALERHGP-------------------AASGTVKIVTYPFPC--V-GRMZM2G042865 A--VTP-ANVAVVRSALERHGP-------------------AASGTVRIVTYPFPR--V-GRMZM2G051474 L-FASA-TSPPSE--QYLAV-----------------A--AAVPDAVDLIALPAPP----GRMZM2G372068 ITFASA-ASATQR-----AF-----------------L--ASLPPSVAARALPPVD----GRMZM2G085854 ITFAST-ASATQR-----AF-----------------L--ASMPPAVASMALPPVD----GRMZM2G426415 ITFAST-ASPTQR-----AF-----------------L--ASLPPAVSSLSLPPVD----GRMZM2G156026 VTFNLS-GDPDAK--SAAVL-----------------S--SLRAANVSTATLPAVP----GRMZM2G007795 VTIPGM-SNPATE----AVV-----------------L--SSLPSYVLTAVLPAVP----GRMZM2G455075 LVTPPP-MAASSE-ASSSQQ----------AH-----CEMMATVDGIVFHHLPAIE----GRMZM2G039129 ----------------------------------------EASGLAIRFHHLPAVE----GRMZM2G113794 LVMPLP-AEAKRA-SEITEH----------IR----QQ--EASGLAIRFHHLPAVE----GRMZM2G095261 LVMRPP-TA-EAT-SEVEAH----------VR----RE--AACGLDIRFHRLPAVE----GRMZM2G063550 LITQMT-MSANLM-SDVDDI----------MR----RE--ADSGLDIRFVHLPAVE----GRMZM2G415973 LLAPLP-MA------RFAHI----------VE----REATSGSGFDIRFHRLPDVE----GRMZM2G395508 LVVRPP-TP-ESA-AEVGAH----------VR----RVAES-GIAGVRFHHLPAVE----GRMZM2G324466 LVMRPP-TE-HEA-RGLESV----------IR----RAEEAAAGLDVRFHRLPGVE----GRMZM2G131928 LVMRPP-TE-HEA-RGLESV----------IR----RAEEAAAGLDVRFHRLPGVE----GRMZM2G155911 LVMRAP-TE-QLA-ADLDAH----------IR----RE--EASGLDVRFVRLPAVQ----GRMZM2G095807 ALIDVT-NERNTT---FAAA----------ID----RAMASSSKLAATFHTLPRIR----GRMZM2G096412 ALIDLT-LDQDAA---LADA----------VD----RVA--SAKPSVAFHRLLRIQ----GRMZM2G060993 ALIDLT-MDQDVT---LAAA----------VD----RVA--SAKPSVTIHRLPRIQ----GRMZM2G449019 VVVPEF-----------SSQ----------FK----RVA--AANPSISFHVLPPVS----GRMZM2G043295 VIAEPA-ASSPDF---RIVD----------LD----RVA--ASNPAITFHVLPPVP----GRMZM2G381025 VLIEPP-IKSTDS---GAGF----------IE----RVA--ASNPSITFHVLPPTP----GRMZM2G122072 VLLEPP-IKSNAS---GASF----------VE----SFA--ASNPSITFHLLPPIP----GRMZM2G051683 VVVEPP-FNT----GATAPF----------LA----GVS--AANPSISFHRLPKVE----GRMZM2G010987 VVVEPP-FNT----GATAPF----------LA----GVS--AANPSISFHRLPKVE----GRMZM2G130119 AIADVP-SSS-----ESHDT----------VA----RLS--ATYPSVSFHLLQAAT----GRMZM2G105991 VVVEPP-VYAD----GFAAT----------VA----RAK--ASNASVACHVLPPPA----GRMZM2G058314 AVPTPP-SSTADFFASSASA----------VA----TLE--AANPAVSFHHLPPPD----AC206788.3_FGP015 AVVNPP-DTD----AVSAAA----------VE----RLA--AANPAIAFRLLPVPA----GRMZM2G036409 AVVDPP-EKH----AVLAAA----------LA----RLA--AVSPSITVHLLPIPP----GRMZM2G111344 AIVDSP-DKD----SVSAEA----------LA----RLA--AANPDIAFRHLPVPS----GRMZM2G163519 V--STP-VNLSAIA---RQ-----------------------QTPRIRFVELHLPA---AGRMZM2G174192 V--STP-VNLSAIA---RH-----------------------QTPRIRFAELHLPA---AGRMZM2G061321 F--STP-RNTRRLIRIPPE-----------------------LAGHIRVVDIALPR---VGRMZM2G135722 F--STP-RNTRRLIRIPPE-----------------------LAGNIRVVDITLPR---VGRMZM2G061289 F--STP-RNTRRLIRIPPE-----------------------LAEHIRVVDIALPR---VGRMZM2G180283 V--STQ-GILRRLRPVAPA-----------------------LASLIDLVALPFPR---IGRMZM2G066067 V--STP-GNVARLPPLRPA-----------------------AAPRVDIVALPLPR---VGRMZM2G022266 V--STP-RNLARLPPRRH---------------------------DVHLVPLPLPR---VGRMZM2G162755 V--TVL-PTVSAAETDYFNGL------------------FA-DYPAVRRVDMHL------GRMZM2G383404 V--TVL-PTVSAAEEDYFTSL------------------FA-ALPRVRRVDLHL------GRMZM2G162783 A--AVQ-PTVSSAESRLLDAL------------------FVAAAPAVRRLDFRL------GRMZM2G099740 V--TAL-PTVSSAESRHIAAL------------------YA-AFPAIRQLDLRF------GRMZM2G154558 V--ATP-WVSESLRATL------------------------A-ASNVDVHALPF--NPADGRMZM2G082249 V--STP-RLLGSLTLPP------------------------A-SPPVRLHALPF--VPADGRMZM2G159404 V--STP-RNVASLQTSAWS----------------------N-APFLGFHALPF--TPADGRMZM2G086925 A--APM-EHVRQARSRVQG----------------------WGDDTLCRVHFHELSVSAYGRMZM2G075387 A--APE-PHLREARARLHG----------------------WGPDPA-AVCFRALDVPAHGRMZM2G120016 A--APG-PHVRQARARVHG----------------------WGDDAHRRIEFHELEVPAYGRMZM2G168474 A--APP-PHVRQARARVHG----------------------WDPRALGSIRFHDLDVPPYGRMZM2G110511 A--APP-PHVRQARARVHG----------------------WDPRALGSIHFHDLDVPAYGRMZM2G160523 V--TTP-ANLQLLSSLLAA----------------------HP-TAVRAATFPFPS----GRMZM2G301148 A--VTS-GNAALLAPLLRA----------------------CP-SAAVLALPFPPS----AC234524.1_FGP005 L--TTP-ANRAFAASRLP--------------------------SSVRLVELPFPS----GRMZM2G416045 --------------------------------------------MSVGLVALLFSS----GRMZM2G343426 ------------------------------------------------------------GRMZM2G091176 V--TTP-GNVAFARSRLP--------------------------ASVGLVALPFPS----GRMZM2G175910 V--TTP-GNAAFVRAALRQ----------------------GGAGDAAVLELAYPAS---GRMZM2G006565 L--TTP-GNAAFVRAALAG------------------------ADSVAIVELPFADNLTKGRMZM2G306328 V--TTP-GNAAFVRAALAG------------------------ADSVAIVELPFADNLTK

Page 9: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

GRMZM2G085054 F--HTAGARA---------------------------PDPADYPADYRFVPVPV------GRMZM2G161335 F--HSG---A---------------------------LDPADYPADYRFVPVTV------GRMZM5G815665 L--HTG-FNA---------------------------PDATRHP-ELTFVPIHE------GRMZM2G097030 L--HTD-FNA---------------------------PDPALHP-DITFVSIRE------GRMZM2G463996 F--HAT-FNA---------------------------PDPARHPPGYRFVPVGD------GRMZM2G156127 F--HTD-FNA---------------------------PDKSRHP-AYDFVPVPV------GRMZM5G892627 F--HTH-FNA---------------------------PDASQHP-AYDFVPVQF------GRMZM2G173926 L--HTR-FNA---------------------------LDPARHP-EFQFVAVPD------GRMZM2G047910 L--HTR-FNA---------------------------LDPARHP-EFQFVAVPD------GRMZM2G117878 L--HTA-YNA---------------------------PDPAHHP-GLAFVAVPD------GRMZM2G022242 SFISTT-DSLARLPTG-----------------------AGAAPSNLRFVEAPS------GRMZM2G165390 SFLSTA-SSLAQLRKASSAS------------------AGHGLPGNLRFVEVPD------GRMZM2G319965 S--VPL-SCHRRMFPSSSDDDGE--------------ATTIISDGLISYLPFSD------GRMZM5G832805 S--VHV-AAHRRMFPAQLDPDAA-----------GEEDEEEASDGVISYVPHSD------GRMZM5G896260 ------------------------------------------------------------GRMZM2G106443 S--VPV-AAQRRLFPSPT----------------TMVDKEACSDGVISYVPHSD------GRMZM2G475884 S--TAV-SGHRHMFPHLTSP------------------DGEVVQGVVSYIPYSD------GRMZM2G344993 S--TTE-VAHRRMFPAKPNDG----------------AKDSDEDGRLEFLPFSD------GRMZM2G316030 C--APL-SAFRKMFPGAAGVTVT-------------EEECGDGDAKVKYVAYSD------GRMZM2G363554 C--TAV-SALRKMFPGAEADA----------------EEGHRDGAGVRYVPYSD------GRMZM2G457929 S--TAV-SALRKMFPGEQAG-----------------AEGHRDAAGVWYVPYSD------GRMZM2G050748 S--SSS-VVRDDLAAASGVSA-------------------GGDGVPFGAGRLRF------GRMZM2G304712 S--SLS-SIGAKLTASAGVSA-------------------GGDGVPVGRGRVRF------GRMZM2G417945 S--SIS-RVGAMLAASVGVSA-------------------GGDGVPVGRGRVRF------GRMZM2G022101 T--TFR-HAGIRALR----ED-------------------GACVAAAGRGRLRF------GRMZM2G055446 S--TAP-HGGLKFGHGDG------------------------STVDFGRGTIRF------GRMZM2G073244 T--TAV-HTGLRFKHQQHGED-------------------GAAVDAVGRGAMRF------GRMZM2G024131 V--TTR-FIQRTADV---------------------------DAHPAMVEAISD------AC199541.4_FGP007 V--TTR-YVMSTSPA---------------------------AGVPFPLLAISD------AC199541.4_FGP001 V--VSR-HVLSTTSTS--------------------------RSCPIPVAAISD------AC199541.4_FGP004 V--VSR-HVLSTTSTS--------------------------RSCPIPVAAISD------AC199541.4_FGP002 V--VSR-HVLSTTSTS--------------------------RSCPIPVAAISD------GRMZM2G334336 V--TSR-YVLSTTPP---------------------------PGEPFRVAAISD------GRMZM2G095280 V--TSR-YVLSTTPP---------------------------PGEPFRVAAISD------GRMZM2G035282 V--TSR-YVLSTTPP---------------------------PGEPFRVAAISD------GRMZM2G063042 V--TTR-YVLSTTPP---------------------------PGEPFRVANISD------GRMZM2G171548 A--VTR-FILATCAPGD---------------------------AGVRLAAVSD------GRMZM2G022212 A--VTR-FVLSKSGQSS-------------------------AGGAVHIAPISD------GRMZM2G078465 A--ATR-FVVSSTKP---------------------------TPSSVHVAVISD------GRMZM2G110816 A--VPD-FIHRRMGQYSA--------------------------AGVALVSIPC------GRMZM2G159918 A--VPD-FVHHRMGRLTED----------------------ACGAELALVPIPS------GRMZM2G021786 A--LPD-FIHRRIVAACGGG---------------------GV-VGVTLASIPS------GRMZM2G432291 A--VPD-FVYRRLVSACGQV---------------------RTRVEVELASMHS------GRMZM2G098892 V--NTD-FNHARILATMAG---------------------ATPAGGIHLVSFPD------GRMZM2G098890 V--NTD-FNHARIVTALAAGG---------------GETRAAAHAGIHLVSFPD------GRMZM2G328224 V--NTE-VNHRLILGALAT--------------------GDKELGGVDMVSIPD------GRMZM2G031138 V--NTD-VDRAAVVAALEAS-----------------GGVAALGGGIHLASIPD------GRMZM2G030821 V--STE-PVHALVLDAMRSSSPGP------------AGDGSAQLNGIRLASVPD------GRMZM2G130256 V--NTD-HIHGQLVAASPDLVAGQ------------GG-AQPEPGQVHFVSVSD------GRMZM2G363545 V--NTE-FNHRRVVVAAGGGRA--------------------PDGRLRLVGVAD------GRMZM2G128504 A--NSE-FNHRRVVAAAMPESE--------------SP-TLLGRRGIRLVAVPD------GRMZM2G046994 A--NSE-FNHRRVVAAAAM-SE--------------SS-TLL-GRGVRLVAVPD------GRMZM2G004858 V--VTE-EWHALLAAAG--------------------V-PGTLPDRVRLATIPN------GRMZM2G073376 V--VTE-EWLGLIRSSS--------------------AAAAAEPAGIRIRTIPN------GRMZM2G440902 I--VTE-EWLSLLGAPA--------------------AL-PDLGLRVRFEAIPN------GRMZM2G173315 I--NTE-SVHHQIGA-------GGDIFAGVRARG---GGTTTEELDVRYELVSD------GRMZM2G337048 V--STE-AVHDQTARALGVDPDGYDPFAAARARAQEEGPPPPPLGDVSYALVSD------GRMZM5G834303 L--HTD-HNLRRLGTAA--------------------AEATVASPRLRFLSVPD------GRMZM2G083130 V--HTE-LYHRRLLRTKQQQATGG-------------DDALDPDEGFSVEVIPD------GRMZM2G476049 ------------------------------------------------------------GRMZM2G049798 V--NTE-HNHRRVQATE------G-------------AGAVRGGEGFRFEAIPD------GRMZM2G118657 V--NTE-HNHERLRRER------R--------------------RGFRFEAVPD------GRMZM2G169628 V--NSE-YNHRRLLRSR------G-------------QDSLAGTDGFHFEAVPD------GRMZM2G470524 V--NSE-YNHRRLLRSR------G-------------ADSLAGLDDFRFETIPD------GRMZM2G089241 V--NTE-FNHRRLLQSR------G-------------PEAIDGITRFRYAAIPD------GRMZM2G373124 V--NNE-FNHRRHLRAR------G-------------PGALHGAPGFRFTAIDD------GRMZM2G083935 V--NNE-FNHRRHLRAR------G-------------PNALDGTDGFRFTAIDD------GRMZM2G041699 V--NTE-YNQARLVRTR------G-------------AAAVAGLPGFRFATIPD------GRMZM2G132706 V--NTE-YNHRRLVRAR------G-------------AAAVAGLTGFRFATIPD------GRMZM2G009125 V--NSE-FNHRRLLRSR------G-------------ASALDGLPDFRFAAIPE------GRMZM5G870067 V--NSE-YNRRRLLRSR------G-------------ADALDGLPGFRFATIPD------

Page 10: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

GRMZM2G426242 SSIPPGVESTRGC------P-PEYFPVF-IHA---LTALREPVRAWARSRSP-------SGRMZM5G854655 AGLPDGCERTDHI------PSPDLVPNF-FVA---TARFGEAVARHCRRLPTA-----TAGRMZM2G179063 AGLPEGSERLDLL------RSPADVPRF-FHA---NRLFGEAVARYFRGEA-------LPGRMZM2G035755 AGLPEGCERMDLL------RSQAEVPRF-FVA---NKGFGEAVSRHCLGEA-------L-GRMZM5G888620 VGLPPGVECAPAL------NTMDDREKF-FHG---AQLLREPFDRFLAEN----------GRMZM2G113653 AGLAGGHESADDL------PNRELAGPF-AVA---VDLLAPLFADLLRRQ----------GRMZM2G178209 FGLPEGCENADML------QSRDLFKNF-MDA---CAALREPLAAYLREQ----------GRMZM2G325014 AGLPEGCESADAL------PGIDFLRNF-HDA---CAMLRAPLVAHLRE-----------GRMZM2G325023 AGLPEGCESLDAL------PGLGLLRNF-NDA---CAMLRGPLVALLRDRE--------GGRMZM2G067361 EGLPDGADDVDKV------P-PDLWTNY-FRA---LARLREPLERHLRER----------GRMZM2G148277 ------------------------MSSY-YRG---MALLCAPIESYLRAN----------GRMZM2G403740 AGLPEGADNMDNV------P-PEHARRY-FDA---VALLRAPIEAHLRAH----------GRMZM2G008935 DGLPPGIENMDQV------TDNGHFVPL-FDA---LQKLAGPLEAYLRAQ----------GRMZM2G151332 DGLPPGIENMDQV------TDNGHFVPL-FDA---LQKLAGPLEAYLRAQ----------GRMZM2G479038 LGLPEGMENVDMV------VEKEHFMPF-FQA---TWKMDAPLEEYLRSL----------GRMZM2G338465 HGLPEGLENMDLL------TRREHFLPF-FQA---AWKMDAPLEEYVRSL----------GRMZM2G458776 LGLPQGCESIDMV------TDLSLFVPF-YEA---MWLLAAPLEAYLRSL----------GRMZM2G056335 VGLPEGCESFDML------ADISLFATF-YEA---LWMLPEPLEAYLRSL----------GRMZM2G007012 LGLAAGCKRVDML------QDLSLIVPF-YDA---VWLLAEPLEAYLLSL----------GRMZM2G389944 LGLAAGCERVDML------DDISLIIPF-YDA---VWLLAEPLEAYLRSL----------GRMZM2G067424 GG----YEDFSLL------PDDASAAPT-FFA-AAEAALAPALTAAIRAHHH------GGGRMZM2G074395 -GLGEGVECLATA-------TARDAWRV-YRA---MEVVQPSHESLLR------------GRMZM2G037545 DGLPPGVENHSKV------KAAADAWRI-DAVATDEKLMRPGQESLIR------------GRMZM2G082037 DGLAPGVENLST--------AGADAWRI-NAAAIDEALSRPAQEALLR------------GRMZM2G042865 DGLAPGVENLST--------AGDDAWRI-DAAAIDEALSRPAQEALLR------------GRMZM2G051474 ----PD-----AL-----PPA-TAARERAELA---VASNVPRVREIARELG---------GRMZM2G372068 ----LS-----DL-----PRD-AAIETLMTAE---CARSLPAIAAVLAELG---------GRMZM2G085854 ----MS-----DL-----PRD-AAIETLMSEE---CVRAVPALTEALLSLKQR-----PTGRMZM2G426415 ----LS-----DL-----PRA-AAIETRMSEE---CARSVPALTAVLAGLR-------RSGRMZM2G156026 ----LD-----DL-----PDD-ASIETVLFEV---IGRSIPHLRAFLRDVG-------STGRMZM2G007795 ----LD-----DL-----PSD-IGFGALVFEF---VRRSLPNLRALMEDAS-------R-GRMZM2G455075 ----HRT------------DLAHP-----SEY---IRLYAPQVKEAIAGLAAP-----V-GRMZM2G039129 ----PPT------------DHSGI-EEYISRY---VQLYSPHVKAVVASLTCP-----V-GRMZM2G113794 ----PPT------------DHSGI-EEYISRY---VQLYSPHVKAAVAGLTCP-----V-GRMZM2G095261 ----APT------------DAVGV-EEFIARY---IGLHAPHVRDAVAAMACP-----V-GRMZM2G063550 ----LPT------------VHHGL-EDFMMRF---IQLHATHVKEAVSGMSSP-----V-GRMZM2G415973 ----LPA------------F-SGP-EDMISSF---IQLQASNTKAAIAGLASP-----V-GRMZM2G395508 ----PPA------------DCAGNLQEFKSRY---LELHRPHVEAAARELG-------A-GRMZM2G324466 ----APA------------GCAGP-VEFISRV---VELHAPHVRAAVAGLACP-----V-GRMZM2G131928 ----APA------------GCAGP-VEFISRV---VELHAPHVRAAVAGLACP-----V-GRMZM2G155911 ----PPT------------DFHGI-EEFISRL---VQLHAPHVRAAISSLASP-----V-GRMZM2G095807 ----DP----PTV-----TND-VNLLLGYFEI---IRRYNEHLRELLRSIPRQ-------GRMZM2G096412 ----NP----PTV-----TDD-GEPFLWYFQI---LKRYNDRLREFLCSLPPR-------GRMZM2G060993 ----NP----PAI-----TDCGGDGLLWYFKT---VKRYNDPLREFLCSLQQQ-----QPGRMZM2G449019 ----PPP---ADV-----AGSGKHPLLSMLKT---LRRYNEELERFLCSVTSR-----Q-GRMZM2G043295 ------Y---ADL-----AVPGKHHFLLTLQV---LRRYNGELERFLRSV-PR-----E-GRMZM2G381025 ------A---PDV-----ASSTKHPFLLILEL---MRQYNDKLESFLRSI-PR-----E-GRMZM2G122072 ------P---PDL-----ASSTKHPFLVVLEL---LGQYNDKLESFLRTI-PR-----E-GRMZM2G051683 ----RLP-----------LVSTKHQEALTFEV---IRVSNPHLREFLAAATPA-----V-GRMZM2G010987 ----RLP-----------PVKTKHQEALTFEV---TRVSNPHLREFLAAASPA-----V-GRMZM2G130119 ----ARS---GDE-----ADPDADPFITLIAD---LRATNPALLAFVR-SLPS-----V-GRMZM2G105991 ----SDG-----------GAEPDDPLTRLLRF---LRATNAPLRDFLRALSAS-----R-GRMZM2G058314 ----YPV-----------P--DPDPFLRMLDA---LRLTVPSLTAFLR-SLPS-----V-AC206788.3_FGP015 ----SPD-----------A--GADWVKRDLDT---LRLANPVLRDFLLRSQPA-----A-GRMZM2G036409 ----CAT-----------SKQHSHPIMPILDA---LRAANPALRAFLAARVPA-----V-GRMZM2G111344 ----RGT-----------ERCSTNPVMRAIDV---LRAANPALLGFLR-ALPA-----V-GRMZM2G163519 LDLPPALHTT-------KHLPARLMPAL-KRA---CDLAAPRFGALLDE-----------GRMZM2G174192 PDLPPELHTT-------KHLPARLMPAL-KRA---CDLAAPRFGALLDE-----------GRMZM2G061321 ERLPEDCEAS-------IDLPSDDLRPY-LRV-----AYDTAFADKLSAILKE------PGRMZM2G135722 ERLPEDSEAS-------IDLPSDDLRPY-LRV-----AYDAAFADKLSAILQE------PGRMZM2G061289 ERLPEDAEAS-------IDLPSDDLRPH-LHV-----AYDAAFAGKLSEILQE------PGRMZM2G180283 DGLPDGAEAT-------SDLPPGTAELH-VQA---MDRLAPAFSAFLGAACAD------GGRMZM2G066067 DGLPDGAEST-------NSVPHDKFELL-FKA---FDGLAAPFAEFLGGCCAD------EGRMZM2G022266 EGLPDGVEST-------NDVPPDKRDLH-WKA---FDGLAVPFAEFLAAACAD------EGRMZM2G162755 --LPLDA----------SEFT--REDPF-FLR---WEALRRSVH-LLRPIITN------AGRMZM2G383404 --LPFDA----------SKLPSNDRDPF-VLR---WEALRRSAH-LLGPLIAG------AGRMZM2G162783 --APFDE----------SEFP--GADPF-FLR---FEATRRSAP-LLGPLLDA------AGRMZM2G099740 --APFDA-S--------SEFP--GADPF-YLR---YEALRRCAPSLLGPLLAG------AGRMZM2G154558 HGLPADAHNS-------ASIGPDQLGSL-FAA---SESLGPAFCRFVAGLRA-------T

Page 11: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

GRMZM2G082249 HGLPPGADSL-------ADVQIHQFITF-FTA---SESLRPAFEKFV------------SGRMZM2G159404 HGLPPDCESS-------DAVQPGAIAFL-LVA---FESLEAAFDDYLNTAISA-----AAGRMZM2G086925 ASPPPDP-AA------ESAFPSHLVPMW-EAF---TTDAPAPLAALLGGISA--------GRMZM2G075387 DSPSPDP-S--------SPFPAHMLPLF-EGF---CTGARASLAALLAELAA--------GRMZM2G120016 ATPPPDP-VA------PSPFPTHLIPMS-EAF---LAGARAPVASLIGRVSA--------GRMZM2G168474 DSPAPDL-AA------PSPFPNHLMPMF-EAF---AAAARAPLAALLQRLST--------GRMZM2G110511 DSPAPDL-AA------PSPFPNHLMPMF-EAF---AAAARAPLAALLQRLST--------GRMZM2G160523 --HPSLPPGL-EN---TKGCSPVQFPAF-VHA---LAELRGPILAWVKAQPD--------GRMZM2G301148 --SPLLPPGSGEN---TKDLPRHLFRPF-MAS---LAALGPPLLAWCHAQSR--------AC234524.1_FGP005 --LPPLPAGVEST---DALPSMSLFPTF-LRA---TALLREPFAQFLTSLPS--------GRMZM2G416045 --FSPLPEGIEST---DALPCPSLHLTF-MEA---MGLLRGPFTEFLASLPS--------GRMZM2G343426 --------------------------MF-MQA---TGLLRGPFAEFMASLPS--------GRMZM2G091176 --FPPLPEGVEST---DALPCPSLHLTF-MQA---TGLLRGPFAEFLASLPS--------GRMZM2G175910 -SAPAGGEGA------EGVASAASFAAF-AEA---TSALRPRFQEALAALRP--------GRMZM2G006565 PGAPPRRECV------ETLDLMSSLHAF-VES---VSLLRPQFEEALAALRP--------GRMZM2G306328 PGAPPLPECV------ESLDLMSSFPAF-VES---VSLLRPRFEKTLAALRP--------GRMZM2G085054 -EVA------PELM------ASEDIAAIVTAL---NAACEAPFRDRLSALLSAADGEAGEGRMZM2G161335 -EAD------PKLL------ASEDIAAIVTTL---NASCDAPFRARLSALLA------AEGRMZM5G815665 -SS-------FPDEV---TSLGTDIVTQLLAL---NAACEAPFREALASLL--------RGRMZM2G097030 -SL-------PAEVV-----ANPDMVEQMMQL---NAVCEAPFQAALAGELL-ARGTTTGGRMZM2G463996 -GVPS-----ADLVP---SGVDADIPGALLRI---NRRLREPFRDCLRQALALPEDDGDEGRMZM2G156127 -RGCL-----PKGSS---DAL-QVTVERILAV---NRACEAPFR----ERLA-SLLA--RGRMZM5G892627 -DGT------PADSA---DTV-RVTVEHVLAV---NRACEAPFR----ERLA-ALLE--EGRMZM2G173926 -GT-------PADVA----AM-GRIIDIILAM---NAAMEASPAVG--EALRASAVAGQDGRMZM2G047910 -GT-------PADVA----AM-GRIIDIILAM---NAAMEASPAVG--EALRASAVAGQDGRMZM2G117878 -VI-------PEAVA----AT-TNGIAKILAL---NAAMEASGHVR--GALA-SLLAEEAGRMZM2G022242 -GGGD------GP----GIPSWRRMELFLDAA---EDGGLRQALE-TARAAA--G----GGRMZM2G165390 -GAPA-----AEE----TVPVPRQMQLFMEAA---EAGGVKAWLE-AARAAA--G----GGRMZM2G319965 -GKDD-----GS--W---PVDSEDR----ARR---RDANFRTLSAVVSRLAS--G----GGRMZM5G832805 -SFDD-----GS--L---PRTPEDW----ARR---RRASRESLSAMLARFAG--G----GGRMZM5G896260 ------------------------------------------------------------GRMZM2G106443 -GFDD-----GAS-A---PKTAEDW----ARR---RRATAASLSAVVARFAA--A----GGRMZM2G475884 -GFDG-----GFN-P---E--AHGVGAYRERA---RQVGSETLASIVARLAR--R----GGRMZM2G344993 -GTEA-----GYV-R---SADLGSFNAYMASF---HAAGARSAAEIVDALAA--R----GGRMZM2G316030 -GYDG-----GFD-I---A--VDSYARYMEQA---RMAGSRSLAGVLRRLRD--D----GGRMZM2G363554 -GYDD-----GFD-G---A--VHDATRYMDQV---KVVGSRTLGDVLARLRG--A----GGRMZM2G457929 -GYDD-----GFD-R---D--AHDATHYMEQI---KLVGAATLGAVLDRLHG--V----GGRMZM2G050748 -DFLD-----DPF-----DGTLLDLEDFLRHL---ETAGRLALADLLRRQAE--A----GGRMZM2G304712 -EFMD-----DED-----PGP--DLDDLMRHI---AKDGPPALAELLGRQAR--A----GGRMZM2G417945 -EFMD-----DED-----PGP--DLDDLLRHL---AKDGPPAFAELLERQAD--A----GGRMZM2G022101 -DYLR-----DDG-CGPRSPVPGDPSDMLRHV---ADAGPSALAGLLRRQAD--A----GGRMZM2G055446 -EHLK-----GGALWASDDPRYHDAMDVLRHL---EETAPPVLAELIRGQSE--A----GGRMZM2G073244 -EHLR-----GGEVWAPDDPRYHVADDVGRNL---DAVASVALSELIRRQAD--A----GGRMZM2G024131 -GHDE-----GGF-----ASAAGVAE-YLEKQ---AAAASASLASLVEARAS--S----AAC199541.4_FGP007 -GFDE-----GGM-----ASCSDPVE-CCRRL---EAVGSETLARAIDAEAR--A----GAC199541.4_FGP001 -GFDD-----GGI-----SSCPDTAE-YVRRM---EAAGSETLAGLLDAEAR--A----GAC199541.4_FGP004 -GFDD-----GGI-----SSCPDTAE-YVRRM---EAAGSETLAELLDAEAR--A----GAC199541.4_FGP002 -GFDD-----GGI-----SSCPDTAE-YVRRM---EAAGSETLAELLDAEAR--A----GGRMZM2G334336 -GFDG-----GGA-----AACPDIAE-YYRQL---EAVGSETLAELIQTEAA--E----GGRMZM2G095280 -GFDG-----GGA-----AACPDIAE-YYRQL---EAVGSETLAELIRTEAA--E----GGRMZM2G035282 -GFDD-----GGA-----AACPDLDV-YWRQL---EAVGSETLAELIRSEAA--D----GGRMZM2G063042 -GFDD-----CGA-----AACPDLSE-YWRQL---QAIGSVTLAELIRSEAS--E----GGRMZM2G171548 -GFDR-----GGF-----GECGDVAA-YLSRL---EAAGSETLGELLEDEAA--R----GGRMZM2G022212 -GCDR-----GGY-----GEAGGIEA-CTARL---ESAGSATVGELLRSKAE--R----GGRMZM2G078465 -GCDE-----GGP-----AEVGGMGARYFERL---ESAGSETLDELLRSESA--L----GGRMZM2G110816 -GVA------DED----GSDEPPGPAMFLHAM---EHRMPAQLEGMLQSARR--G---VGGRMZM2G159918 -GVP------D-D----GRGEPPGFATIVHAM---EHHMPAHLERIVMGAGH--G-----GRMZM2G021786 -GIDIVQQDAAAG----DDDDTPGFRDIVHSM---EHHMPLHLERMLTSPR---------GRMZM2G432291 -GV-------PDD----GVGEPPGFAGFARAM---EHHMPTSLEAMLTAQR---------GRMZM2G098892 -GMDP-----DG--------DRTDIGKVLDGL---PAAMLGGLEETIRS-----------GRMZM2G098890 -GMGP-----DG--------DRADIVRLAQGL---PAAMLGRLEELARA-----------GRMZM2G328224 -GLGT-----GE--------DRKDLGRLTDSF---SKVMPGELEKLITSIN-----ADGRGRMZM2G031138 -GLAD-----DE--------DRKDISKLVDAY---TRHMPGYLERLLADME-----AAGRGRMZM2G030821 -GLAD-----GA--------DRRDLSRFLDAL---SLCVPGHVERLIRE-----------GRMZM2G130256 -GFPA-----DG--------DRNDLGTLTSAL---MCSLPAAVERM-------------VGRMZM2G363545 -GMGD-----GE--------DRDNFVRLNACM---KEAMPLRLDALLDADD--------EGRMZM2G128504 -GMGP-----GE--------DRNDIVRLTLLT---AEHMAPRVEDLIRRSRD--G-DGGAGRMZM2G046994 -GMEP-----GE--------DRNNLVRLTLLM---AEHMAPRVEDLIRRSSD----DGGAGRMZM2G004858 -VIPS-----ER-------VRGADFAGFVEAV---HIKMVAPVERLLDRLSL--------GRMZM2G073376 -VIPS-----EH-------GRAANHSGFLDAV---ATEMEAPFDRLLDGLEG--------GRMZM2G440902 -VIPS-----EH-------GRANDMVGFMEAV---YTKMASPFEQLLDRLAP--------

Page 12: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

GRMZM2G173315 -GFPL-----GFD-------RSLNHDQFMEGV---LHVLPAHVEDLLRRRVV--V-----GRMZM2G337048 -GLPV-----GFD-------RSLNHDDFMGAL---FHALPAHVEQLLR-RVV--V-----GRMZM5G834303 -GLPD-----DD------PRTVDGLPELMESL---RTKASASYRALLASLRA--G---GGGRMZM2G083130 -GLSL-----ED--------PPRTLRAYHEAM---ERNCLEPFKALLRDLLL--P---PTGRMZM2G476049 ------------------------------------------------------------GRMZM2G049798 -GLSE-----AE------RGKQDYGRSLAVST---STRCAAPLRDLIARLNG------TPGRMZM2G118657 -GLAD-----ED------RVAPDRTVRLYLSL---RRSCGPPLAELARRL----------GRMZM2G169628 -GLPQ-----SD-----NDDVTQDIAALCLST---TAHSAAPFRDLLARLNA------MPGRMZM2G470524 -GLPP-----SGS----DDDVTQDIPALCESL---SRSGAAPFRDLLARLNG------MPGRMZM2G089241 -GLPP-----SD------ANATQDVPALCYST---MTACLPHLLSLLRKLNS--DDPSSSGRMZM2G373124 -GLPP-----SD------ADATQDVPKLCYST---MTTCLPRFRDLIVRTNA--E-AEAEGRMZM2G083935 -GLPL-----FE------ADATQDIPALCHST---LTTCLPRFKDLIARINA--E-AEAEGRMZM2G041699 -GLPP-----SE-----DDDVTQDIPSLCKST---TETCLGPFRRLLADLS---------GRMZM2G132706 -GLPE-----SD------ADATQDPATISYAT---KHNCPPHLRNLLAGLD---------GRMZM2G009125 -GLPP-----SD------ADATQDVPSLCRAT---MENCLPHFRSLLAELN---S---SPGRMZM5G870067 -GLPP-----SD------TDATQDVPSLCRST---EETCLPHFRALLQCLNA--S---SP

GRMZM2G426242 DDGPIVAVVADFFC-GWA-QPLARD-LG-----AA-GIVFSPSGVLGAAVPH--SLFRRLGRMZM5G854655 AHPRPSCVVAGMCH-TWA-HGVARE-LG-----AP-CFIFHGFCAFALLCCE--YLNTHRGRMZM2G179063 PRRRPSCVVAGMCH-AWA-LGLARE-LR-----AP-CYIFHGFGAFALLCVE--YLYKHRGRMZM2G035755 --RRPSCVVSGACQ-TWT-LGLARQ-LE-----VP-CYVFHGFGAFALLCIE--HLYRHRGRMZM5G888620 ---RPDAAVTDSFF-DWS-ADAAAE-HG-----RV-YAAQQ-------------------GRMZM2G113653 ---PADAIVFDGVL-PWA-ATAAPE-LG-----IP-RYAFTGTGCFALSVQR--ALLLHSGRMZM2G178209 -EQPPSCVVSDMSH-WWT-GDIARE-FG-----VP-RLTFNGFCGFASLARY--IMVRDNGRMZM2G325014 AHPPASGLVSDTCH-PWT-GAVARE-LG-----VP-RLGLETFCAFSSFCMR--QMSIHSGRMZM2G325023 DAPPASCVVSDACH-PWT-GGVARE-LG-----VP-RFSFDGFCAFSSLCMR--QMNLHRGRMZM2G067361 -APYPTCVVADFCH-PWA-RELAAS-LQ-----VP-RLCFFSMCAFCLLCQH--NVERFHGRMZM2G148277 -APYPTCVVSDFVH-PWT-KELAAN-LG-----VP-RLTFFSMCAFGLLCQR--NLERFNGRMZM2G403740 ARPYPTCLVADFCH-PWT-TVLAAN-LG-----VP-RLSFFSMCAFCLLCQH--NVERFGGRMZM2G008935 -APRPSCIVSDWCN-PCA-AGAARS-LG-----IH-RLFFHGPPCFYSLCDL--NATDHGGRMZM2G151332 -APRPSCIVSDWCN-PWA-AGAARS-LG-----IR-RLFFHGPPCFYSLCDL--NATDHGGRMZM2G479038 -PRRPDCVVADSCN-PWA-ARVCAR-HG-----IP-RLVLHCPSAYFLLATH--CLSTHGGRMZM2G338465 -PRRPDCLIADSCN-PWT-AEVCAR-HG-----IP-RLVLHCPSTYFLLAMH--SLSKHGGRMZM2G458776 -PRRPDCLVADTLG-PWT-AGVARR-LG-----VP-RLVLHGPSAFFLLAVH--NLARHGGRMZM2G056335 -PRLPDCLLCDSCS-SWT-ATVARR-LG-----VL-RLVVHFPSAFYILAAH--SLAKHGGRMZM2G007012 -PRMPDCLVSDSFM-AWT-ASVARR-HG-----IL-RFVVHFSPASYVLAAH--ILETRGGRMZM2G389944 -PRLPDCLVSDSCM-PWT-ASVTRR-HG-----IL-RFVVHFPSAFYILAAH--ILEKRGGRMZM2G067424 GGGRPVAVVSDAVL-YWA-PRVARD-CG-----VP-HVTFHTIGAFAAAAMV--ALHLYRGRMZM2G074395 -DHRPDAIVADVPF-WWT-TGVAAE-LG-----VP-RLTFHPVGIFALLAMN--SLFTIRGRMZM2G037545 -EHAPDLVITDIHF-WWN-VDVATD-IG-----AP-CVTFHAMGTFPTLAMF--NLS--RGRMZM2G082037 -EQSPDAVVTDFHF-FWN-SIIAAE-LG-----LP-CVVFSVIGPFSGLIMH--LLS--GGRMZM2G042865 -ERSPDAVVSDYHF-FWT-SSIAAE-LG-----LP-CVVFSVIAPFSGLVMR--ILA--GGRMZM2G051474 AAAPLVALVVDMVGA-AAARDVAAE-LG-----VP-FYAFFTSPWMTLSLLL--RLPEIDGRMZM2G372068 ETARLVAFVVDQFGM-EA-FNAAGV--------RAARCLFMPMNLHALSLVL--HLPELAGRMZM2G085854 TTGRLVAFVTDLFGA-DA-FDAARA-AG-----VQRRYLFFPTNLTALTLML--HLPELDGRMZM2G426415 TAGRLAAFVADLFGA-DS-LDAARA-AG-----VRRRCIFFPSNLHVLTLIL--HLPDLDGRMZM2G156026 AGAPLAALVPDFFAT-AA-LPLASE-LG-----VP-AYIFFPSNLSALSVMR--SAVELHGRMZM2G007795 --GSVTALVCDFFGT-SA-LPLAAE-LG-----VQ-GYVFLPNSFAMISIMR--HLAGLHGRMZM2G455075 -----AAVVVDFFGT-PL-LDVAHD-LA-----VP-AYVYFASTGAMLALML--RLPGIQGRMZM2G039129 -----AGVVVDIFCT-VL-FDAAYQ-LS-----VP-AYVYLITSAAMCALLL--RSPALDGRMZM2G113794 -----AGVVVDIFCT-AL-FDAAHQ-LG-----VP-AYVYLITSAAMCALLL--RSPTLDGRMZM2G095261 -----AALVLDLFAA-PL-VDVARG-LG-----VP-SYVFMSSTGAMLALML--HLPVLHGRMZM2G063550 -----AAVVVDYFCT-TL-FDVARE-LA-----LP-AYAYMPSGASMVALML--RLPALDGRMZM2G415973 -----AAVVMDYFCT-TL-FDVARE-LA-----LP-VYVYFTSPASMLALML--RLPTLDGRMZM2G395508 -----AALVVDFFAT-AV-LDVARG-LA-----VP-AYVYFTSTAALLALTL--RLPALAGRMZM2G324466 -----AALLLDLFCT-PL-LDVARD-LVAPAVPPP-AYVYFTCSAAALSFFL--RLPAMCGRMZM2G131928 -----AALLLDLFCT-PL-LDVARD-LVAPAVPPP-AYVYFTCSAAALSFFL--RLPAMCGRMZM2G155911 -----AAVVMDFFCT-AL-LDVTRE-LA-----VP-AYVYFTASAGMLAFFL--RLPSLHGRMZM2G095807 ---SVHAVVVDSLSN-AA-LDVAAE-LG-----VP-AYSFFASNASALAVCL--QLPWARGRMZM2G096412 ---SVHAVIVDALSV-DA-LDVTKE-LG-----LP-AYTFCAANASALAVFL--QLPWIRGRMZM2G060993 ARSVVHAVILDGPSA-DA-LDVTKE-LG-----IP-AYTFYATNASAVAVFL--QLPWTHGRMZM2G449019 ---HLHSLVIDMFCV-DA-IGVAAR-LG-----VP-AYTFAPSSASALAVLT--QVPTLLGRMZM2G043295 ---RLHSLVVGMFCT-DA-VDVGAK-LG-----VP-VYTFFASAAATLAVVA--QLPALLGRMZM2G381025 ---RLHSLVIDLFCT-HA-IDVATR-LG-----VP-VFKFFASGAGTLAIFT--QLPALLGRMZM2G122072 ---RLHSLVIDMFCT-DA-IDVAAK-VG-----VP-VYTFFAANAGALAVLT--QTVALLGRMZM2G051683 -------LVVDFFCS-IA-LDVAEE-LR-----VP-AYFFFTSGAEVLAFFL--HLPALHGRMZM2G010987 -------LVVDFFCS-IA-LDVAEE-LR-----VP-AYFFFTSGAEVLAFFL--HLPAIHGRMZM2G130119 -----KALVIDFFCG-CA-LDAAAE-VG-----LP-AYLFFTSGASPLSVYL--HIPVMRGRMZM2G105991 ---RVQAIVLDMFCA-GA-LDVAAD-LG-----LP-AYFHFASGAAGLAYFL--GLPAMRGRMZM2G058314 -----AGLVLDLFCG-DA-LDAAAS-AG-----IP-AYFYYTSCAGDLAAFL--HLPHYF

Page 13: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

AC206788.3_FGP015 ---DADALILDMFCV-DA-LDVAAE-LG-----VP-AYFFFASAAGDLAMFL--NLPYLYGRMZM2G036409 -----AALVVDMFCT-DA-LDVAAE-LA-----IP-AHFFYPSAAGDLAVYL--QVPDLCGRMZM2G111344 -----DALVLDMFCT-DA-LDVAAE-LG-----VP-AYIFFSSALGDLAVML--HLPYYYGRMZM2G163519 --LRPDLLLFDFLYP-WA-PLEAAS-RG-----VP-AVHLSTCSAAATSFM----V----GRMZM2G174192 --IRPDLLLFDFLYP-WA-PLEAAA-RG-----VP-AAHLSTFSAAATSFV----V----GRMZM2G061321 GPERPDWVLIDYAAY-WA-PAAAAK-HG-----VP-CAFLSLFGAATLSFY----G----GRMZM2G135722 VPERPDWVVIDYAAY-WA-PAAAAR-HG-----VP-CAFLSLFGAAALSFY----G----GRMZM2G061289 YPGKPDWVVIDYAAH-WA-PAAAAR-HG-----VP-CAFLSLFSAAVVVFY----G----GRMZM2G180283 SDRKVDWVLLDNFHA-SM-ADVASE-HK-----VP-CILNMPYSAATTEDF----G----GRMZM2G066067 G-RRPDWVVLDSFHY-WA-ATAAVE-HK-----VP-CAMLLPSAACLAVGR----E----GRMZM2G022266 A-TRPDWVLADTFSH-WA-AAVALE-HK-----VP-SAMLLPSAAMIASCW----H----GRMZM2G162755 AP-RITAIITDITLTSCV-IPIAKE-LD-----VP-CHVLFPTAATMLSLNA--YYPVYLGRMZM2G383404 AP-RVSAVITDVTLTSHV-IPIAKE-LG-----VQ-CHVLFPSSATMLSLLA--YTPVHIGRMZM2G162783 E---ASALVTDIVLASVA-LPVARE-RG-----VP-CYVLFTSSAAMLSLCA--YFPAYLGRMZM2G099740 G---ASALVVDMALASVA-IPVARE-LH-----VP-CFVFFTASATMLSFKA--YFPTYLGRMZM2G154558 DPAAHVHIMADMFLG-WT-VGVARDDAG-----VS-HSIVFTCGSYGAAVY----FSLWNGRMZM2G082249 GIGSPVCIVADAFFG-WT-AEVARA-RG-----AS-HAVFLPGGAFGNAVF----FSVWEGRMZM2G159404 GGGHDVCVVSDPFTA-WT-VTAARR-RG-----CA-HAFFASCGAYGSAVV----HSLWSGRMZM2G086925 SCR-RFVVLYDIANG-FA-AEEAA---R-----LP-NGEGFGLVCTAV-SC----IVGRTGRMZM2G075387 SHR-RVVVLYDRMAA-FA-AAEAA---R-----LP-NAEALGVHCLAA-SY----NVGWAGRMZM2G120016 RHR-RVVVLYDRLSS-FA-APEAA---R-----IP-NGEAFCLQCVAA-CF----DAAWTGRMZM2G168474 SYR-RVAVVFDRLNP-FA-ATEAA---R-----LA-NADAFGLQCVAI-SY----NVGWLGRMZM2G110511 SYR-RVAVVFDRLNP-FA-ATEAA---R-----LA-NADAFGLQCVAI-SY----TVGWLGRMZM2G160523 ---PVVAVVADFFCG-WA-QPLARE-IG-----AA-GIVFSPSGVLGTAVP----HSTFRGRMZM2G301148 HGRRVTAVVSDFFTG-WT-QPLARD-LR-----VP-HVTFSPSSALHLAMS----HALWRAC234524.1_FGP005 ---PPLALVSDFFLG-FT-HRVATA-TG-----VR-RVVFHGMSCFSMAIC----KALVTGRMZM2G416045 ---LPLALVSDFFLR-FT-RRVAAN-AD-----VH-RIVFNSMSCFASVIC----KALAAGRMZM2G343426 ---PSLVLVSDLFLG-FT-RRVAAD-AG-----IR-RFVFNGMSCFASAIC----NALATGRMZM2G091176 ---PPLALVSDFFLG-FT-RRVAAD-AG-----VR-RIVFNGMSCFASAIC----KALAAGRMZM2G175910 ---PASLLVADGFLY-WA-HASAAA-LG-----VP-SVSFLGTSAVAHVVR----EACVRGRMZM2G006565 ---PASAVVADAFLY-WA-HTAAAA-RG-----VP-TLSFFGMNMFAHFTR----EVFVRGRMZM2G306328 ---PASAVVADAFLY-WA-HEAAGA-RG-----VP-TLAFFGTSVFAHVTR----EVLLRGRMZM2G085054 AGGRVRCVLTDVSW-DAV-LSAARG-LG-----VP-ALGVMTASAATFRVYM--AYRTLVGRMZM2G161335 GRDSVRCVFTDVSW-NAV-LTASSD-LG-----VP-ALGMMTASAASLRDYM--AYRTLIGRMZM5G815665 GGQDVACAVVDGQC-YSA-LRAAHR-LG-----VP-ALVLRTDSAATFSSML--AYPRLRGRMZM2G097030 GPREVACVVVDGQW-YKM-LGAATR-VA-----VP-ALVLRADGAATLLSML--ATPRLRGRMZM2G463996 GGAPPACLVVDSNL-RGM-QLVAEE-LG-----VP-TLVLRTGAAACLVAYL--AFPALCGRMZM2G156127 --EDVACLVADAHL-LTL-LDVARG-LG-----VP-TLVLRTGSAACLRMFA--AFPALCGRMZM5G892627 EEEEVACLVADAHL-LTL-MDVARG-LG-----VP-TLALRTGSAACFRWFM--AFPMLCGRMZM2G173926 GRPRASCLFVDANL-LAV-HRAARA-LG-----LP-TLVLRTGSAACLGCFL--AYPMLHGRMZM2G047910 GRPRASCLFVDANL-LAV-HRAARA-LG-----LP-TLVLRTGSAACLGCFL--AYPMLHGRMZM2G117878 GGQRLACLIFDSTL-FAA-QKAAAG-LG-----LP-TLVLHTGSAAGFRLFRSDTYNMLHGRMZM2G022242 --AAVTCVVGDAFM-SMA-----AD-AG-----VPWVAVWTGGPCALLAHV--------IGRMZM2G165390 --ARVTCVVGDAFV-WPA-ADAAAS-AG-----APWVPVWTAASCALLAHV--------RGRMZM2G319965 SRPPVTCVVCTLSM-PMV-REVARA-HG-----LP-LAVYWIQPATVLATYY--HYFHGHGRMZM5G832805 --RPVTCVVCTLLV-PAA-VDAATR-HG-----VP-FAVYWIQPATVLAAAY--HYFHGYGRMZM5G896260 -----------MVS-PPA-LDVARE-HA-----IP-LAVFWLQPATVLALCY--HYFHGHGRMZM2G106443 --TPVTCIVVTMVG-PAM-VDVARD-HG-----IP-FAVYWIQPAAVLAAEY--HYFHSYGRMZM2G475884 --HPVTRVVYTALV-GWV-PAVVRA-GG-----VP-AALYWVKPATVFAVYY--HCFHGHGRMZM2G344993 --RPVSRVVYTLLL-PWA-ADVARD-RG-----IP-SALYWIQPVSVFAIYH--HYFHSHGRMZM2G316030 --RPVTCAVYTLLL-PWV-AGVARD-HG-----VAATAVFWIQPATALTAYY--HYFRGHGRMZM2G363554 --RPATLVVYTLLL-SWV-ADVARA-HA-----VP-AALYWIQPATVLAVYL--HFFRATGRMZM2G457929 --RPVTLVVYTLLL-SWV-ADVARA-RS-----VP-AALYWIQPATVLAVYL--HFFRATGRMZM2G050748 --RPVSCVIGNPFL-PWV-TDVAAD-AG-----IP-SAVLWVQSCAVFSVYY--HFVHGLGRMZM2G304712 --RPVACVVVNPFM-PWA-VDVAAD-AG-----IP-SAVLWVQSCAVFSLYY--HHVHGLGRMZM2G417945 --RPVACVVVNPFM-PWA-VDVAAD-AG-----IP-SAVLWVQSCAVFSLYY--HHVHGLGRMZM2G022101 --RPVACVVNNPFV-PWA-LDVAGA-AG-----IP-CATLWIQSCAVLSLYY--HFYRCPGRMZM2G055446 --RAVSCVVANAFA-PWA-SRVASG-MG-----VP-HAMLWTESCAVLSLFY--HYFHSLGRMZM2G073244 --RPVTCVVANVFA-PWA-LRAAGA-MG-----VP-GAMLWTQSCTVMSLYY--HYFQSLGRMZM2G024131 --DAFTCVVYDSYE-DWV-LPVARR-MG-----LP-AVPFSTQSCAVSAVYY--HFSQGRAC199541.4_FGP007 --RAPAVMVYDPHM-PWA-QRVASA-AG-----VP-TAVFLPQSCAVDLIYG--EAWAGRAC199541.4_FGP001 --RPVRVLVYDSHL-PWA-RRVARA-AG-----VA-AAAFMTQMCAVGLVYG--EAWAGRAC199541.4_FGP004 --RSVRVLVYDSHL-PWA-RRVARA-AG-----VA-AAAFMTQMCAVGLVYG--EAWAGRAC199541.4_FGP002 --RSVRVLVYDSHL-PWA-RRVARA-AG-----VA-AAAFMTQMCAVGLVYG--EAWAGRGRMZM2G334336 --RPVRVVVYDPHL-PWA-RWVAQA-AG-----VA-AAAFLSQPCSVDVIYG--EVWAGRGRMZM2G095280 --RPVRVVVYDPHL-PWA-RWVAQA-AG-----VP-AVAFLSQPCSVDVIYG--EVWAGRGRMZM2G035282 --RPVRVLVYDPHL-PWA-RRVAQA-AG-----LA-AAAFLSQPCAVDVVYG--EVWAGRGRMZM2G063042 --RPVRVLVYDPFL-PWS-RRVAQE-AG-----VA-AVAFLSQSCAVDVVYG--EVLSGRGRMZM2G171548 --RPVRAVVYDAFL-PWA-QGVARR-HG-----AR-AAAFFTQPCAVNVAYG--HVWRRRGRMZM2G022212 --RPVRALVYDAFL-PWA-QRVGRR-HG-----AA-CAAFFTQPCAVDVAYG--HAWAGRGRMZM2G078465 --RPVHVVVYDAFA-PWA-QRVARR-RG-----AA-CAAFLTQTCAVDIVYA--HAWAGR

Page 14: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

GRMZM2G110816 AGRRVSCLVVDLLA-SWA-IPVAAR-FG-----LP-VVGFWVGMVATYRTVA--VIPELIGRMZM2G159918 -RVPCSCLVVDVLA-SWA-VSVAAR-CD-----VP-AVGFWPVMFASYRIVA--AIPALVGRMZM2G021786 -RPPVACVVVDVLA-SWA-VPVAAR-CG-----VP-AAGFWPAMLACYRVVA--AIPELLGRMZM2G432291 -GRGVACLVADVLA-SWA-IPVATR-CG-----VS-AVGFWPAMLATYRVVA--AIPELVGRMZM2G098892 --RDIRWVVADVSM-SFA-LELVHT-VG-----VR-VALFSTYSAATFALRM--QLPRMLGRMZM2G098890 --QRTRWVVADVSM-NWV-LDLAGT-VG-----VR-VALFSTYSATVFALRT--LIPKMIGRMZM2G328224 EREKVSWLIADVNM-AWA-FPVAKK-HG-----LR-TAGFCPSSAAMFAMRI--RIPEMIGRMZM2G031138 --PRAKWLVADTNM-GWS-FEVAKK-LG-----IR-VVSFWPAATACLAFML--KIPKLIGRMZM2G030821 --TKVEWLVGDVNM-GVC-FQAARK-LG-----VR-VAAVFPASAACLGTLF--KVPQLIGRMZM2G130256 ENGQFCCVVVDYGL-TWV-LGIAKK-AG-----MR-TATHWPSCAAVMAAGL--DLPVLIGRMZM2G363545 RLGRVTCVVVDVGM-SWA-LDAVKR-RG-----LP-AAALWPASAAVLAVLF--GAKKLIGRMZM2G128504 EGGPITCVVADYNVGAWA-LDVARR-TG-----VR-SAAIWPASAAVLASLL--SIDKLIGRMZM2G046994 EGGPITCVVADYNVGAWA-LDVARR-TG-----VR-SAAIWPASAAVLASLL--SIDKLVGRMZM2G004858 -ERKPDAIVADTFL-AWG-VGVGSA-RG-----IP-VCSLWTQPATFFLALW--HLDRWPGRMZM2G073376 --PPPAALVADAYV-PWV-VGVGNR-RG-----VP-VWSLFPMSAAFFFAYY--HFDRLPGRMZM2G440902 --PAPAAIVADMFV-PWT-VGVGER-RG-----VP-VCIMCPISATMFAVQY--NFHLLPGRMZM2G173315 -DPATTCLVVDTFF-VWP-ATLARK-LG-----VP-YVSFWTEPALIFNLYY--HMDLLTGRMZM2G337048 -EPRATFLVADTFF-VWP-ATLARR-LG-----IA-YVSFWTEPALIFNLYY--HIDLLTGRMZM5G834303 GFPPVTCVVADGIM-PFV-VDVAEE-LG-----VP-AISFRTVSACAVLAYL--SVPKLIGRMZM2G083130 GVPPVSCVVADTPM-PFA-AVAARE-VG-----VP-DVQFFTASACGLMGYL--QFQELLGRMZM2G476049 ------------------------------------------------------------GRMZM2G049798 GVPPVTCVLPTMLM-SFA-LGVARE-LG-----IP-TMSFWTASAASLMTHM--RLRELQGRMZM2G118657 -VPPVTCVVLSGLV-SFA-LSAAEE-VG-----VP-AFVLWGTSACGFVGTL--RLRELRGRMZM2G169628 GSPPVSCVIADGVM-SFA-QRVAEE-MG-----IL-ALVFWTTSACGFMGYL--HFAELIGRMZM2G470524 GRPPVTCVVLDNFM-SFA-QRVASE-MG-----IL-AVVFCTMSACGFMGYL--HFKELMGRMZM2G089241 GAPPVTCLVVDGVM-SFA-YDAAKE-IG-----VP-CAALWTASACGLVGYR--HYQQLVGRMZM2G373124 GRPAVTCVVADSIM-SFG-LRAARE-LG-----LR-CATFWTASACGFIGYY--YYRHLVGRMZM2G083935 GQPTVTCVVGDSTM-TFA-LRAARE-LG-----LR-CATLWTASACGFIGYF--HYRHLVGRMZM2G041699 -DPPVTCVVSDVVM-GFS-IDATKE-LG-----LP-YVQLWTASTISFLGYR--HYHLLKGRMZM2G132706 ---GVTCVVADNLM-SFS-LDAARE-AG-----VP-CALFWTASACGYMGYR--NFRLLIGRMZM2G009125 DVPPVTCVVGDDVM-SFT-LEAARE-VG-----VP-CALFWTASACGYLGYR--YYRDLMGRMZM5G870067 DVPPVTCVVGDDIM-GFT-LDAARE-IG-----VP-CALFWTASTCGYMGYR--YYRTLI

GRMZM2G426242 VRRPAA-----------------------------------------AEESSVVTFP-A-GRMZM5G854655 PHEAVG-----------------------------------------S-PDELFDLP-A-GRMZM2G179063 PHEAVS-----------------------------------------S-ADELFSIP-A-GRMZM2G035755 PQEAAA-----------------------------------------LADDELFDVP-A-GRMZM5G888620 PRGGRP-----------------------------------------RRPDALVLLP-G-GRMZM2G113653 PQNGVA------------------------------------------SDTEPFLVP-G-GRMZM2G178209 LLEHVE------------------------------------------DENELVSFP-G-GRMZM2G325014 VFEGIS------------------------------------------DHKRPVRVP-G-GRMZM2G325023 IFEGVD------------------------------------------DDTRPVRVP-A-GRMZM2G067361 AYDGVA------------------------------------------DDHELVVVP-G-GRMZM2G148277 AYDGVQ------------------------------------------GSDEPVVVP-G-GRMZM2G403740 AYRGVA------------------------------------------HDDEPVVVP-G-GRMZM2G008935 LRELAAAAAAA---------------------------------DVDD-GQERFVVP-G-GRMZM2G151332 LRELAAGAAAA---------------------------------DVDDGGQERFVVP-G-GRMZM2G479038 VYGRVA------------------------------------------HELEPFEVP-G-GRMZM2G338465 VHDRVA------------------------------------------DELETFEVP-D-GRMZM2G458776 TYDRAA------------------------------------------GDMEPFEVP-D-GRMZM2G056335 AYDRAA------------------------------------------DDFEPLEVPAE-GRMZM2G007012 VYDRAA------------------------------------------DDFEPFEVP-E-GRMZM2G389944 LYDRADDD----------------------------------------DDFEPFEVP-E-GRMZM2G067424 PEVHTD----------------------------------------------RFAVP-G-GRMZM2G074395 PDIIGR----A---------------------------------SS-DAAGTVLSVP-G-GRMZM2G037545 AA--------G---------------------------------AV-DAAGGVVTLP-G-GRMZM2G082037 AAVVGD----G---------------------------------GS-ESESREVAVP-G-GRMZM2G042865 AVVSG---------------------------------------------SRDVTVP-G-GRMZM2G051474 --AARAGEHRD-----------------------------A---------AEPIRLP-G-GRMZM2G372068 --ASVPGEFRD-----------------------------L---------AEPVRLP-G-GRMZM2G085854 --ASIPGEFRD-----------------------------L---------AEPLRLP-G-GRMZM2G426415 --AAVPGAFRD-----------------------------M---------PEPLRLP-G-GRMZM2G156026 D-GAGAGEYRD-----------------------------L---------PDPLPLP-G-GRMZM2G007795 GDAAAPGEYRD-----------------------------L---------PDLLPLP-AGGRMZM2G455075 EEL--ASRLRE-----------------------------E---------GGVVDVP-G-GRMZM2G039129 EEVVIEVEFEQ-----------------------------M---------EGDVDVL-G-GRMZM2G113794 EEVAVEVEFEQ-----------------------------M---------EGGVDVP-G-GRMZM2G095261 ESVP-AVDFDE-----------------------------M---------EGDVPLP-G-GRMZM2G063550 GEV--SGDFEA-----------------------------M---------EGTVDLP-G-GRMZM2G415973 REV--AGDFGE-----------------------------A---------ETAFNVP-G-

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GRMZM2G395508 ETV--AADFET-----------------------------F---------EGTVDVP-G-GRMZM2G324466 DEV--AGEFGD-----------------------------M---------DGAADIP-G-GRMZM2G131928 DEV--AGEFGD-----------------------------M---------DGAADIP-G-GRMZM2G155911 EEV--TVQFEE-----------------------------M---------EGAVDVP-G-GRMZM2G095807 AEGQ-PPSFKE-----------------------------L--------GDATVNFH-G-GRMZM2G096412 AEGQ-P-SFKE-----------------------------L--------GDAPVNFS-G-GRMZM2G060993 AEGQ-P-SFKE-----------------------------L--------GDTPLSIS-G-GRMZM2G449019 ASSQ-R-GLKE-----------------------------L--------GDTPLEFL-G-GRMZM2G043295 SGRR-A-GLKE-----------------------------L--------GDTPLQFL-G-GRMZM2G381025 AGRL-T-GLKE-----------------------------L--------GDKPLQFL-G-GRMZM2G122072 DGRQ-T-GLKE-----------------------------L--------GDTPIEFL-G-GRMZM2G051683 ERA--TASFQD-----------------------------M--------GEEPVQVP-G-GRMZM2G010987 ERT--AASFQD-----------------------------M--------GKELVHVP-G-GRMZM2G130119 PDV----SFGD-----------------------------M--------GRSLLHFP-G-GRMZM2G105991 ASV--GTSFAE-----------------------------LG-------GSTVLSFP-G-GRMZM2G058314 ATTEGGPSFKD-----------------------------M--------GKALLHFP-G-AC206788.3_FGP015 PTL--P-SFRD-----------------------------M--------GEAPVRCP-G-GRMZM2G036409 RAA--PSPLRD-----------------------------M--------GKAALNFA-G-GRMZM2G111344 PTA--PSSFKD-----------------------------T--------PETVLHFP-G-GRMZM2G163519 HWFGSA-RAGR---------------------------------AF--------------GRMZM2G174192 HCLGRGRREGC---------------------------------AF--------------GRMZM2G061321 PPEGLMGRGKY---------------------------------ARTKP-EDLTVVP-D-GRMZM2G135722 PPEGLMGRGKY---------------------------------ARTKP-EDLTVVP-D-GRMZM2G061289 PAEGLMGRGRY---------------------------------ARVKP-EQLTVVP-D-GRMZM2G180283 ------------------------------------------------------------GRMZM2G066067 RQSSS-------------------------------------------------------GRMZM2G022266 RPPSHAEQPRS---------------------------------AV---------FE-E-GRMZM2G162755 EKLKGGPEPGVIG-------------------------------DAVDI-PGVFRVP-R-GRMZM2G383404 DKKA---EQGSDI-------------------------------GDVDI-PGVCRIP-Q-GRMZM2G162783 DAHAAAGSVGVGV-------------------------------GNVDI-PGVFRIP-K-GRMZM2G099740 DDVG----AGHGV-------------------------------GDVDV-PGVYRIP-S-GRMZM2G154558 SVPLGAFSAGS---------------------------------T-----DDAFVLP-Q-GRMZM2G082249 HLPHALT-------------------------------------A-----ADEFPLP-D-GRMZM2G159404 HLPVRPD---P---------------------------------A-----TGRVHLP-E-GRMZM2G086925 DAGSRLVRERG---------------------------------LDFFP-V---------GRMZM2G075387 DPGHALLRRHG---------------------------------LVFHP-P---------GRMZM2G120016 DAGQRLLRKHG---------------------------------LDAPH-P---------GRMZM2G168474 DPGHRLLSDYG---------------------------------LQFLP-P---------GRMZM2G110511 DPGHRLLSDYG---------------------------------LQFLP-P---------GRMZM2G160523 RLVRRPAECDG---------------------------------DDEFS-VSFPAIP-G-GRMZM2G301148 SPPT-----RH---------------------------------LDDEA-VTFPEVP-G-AC234524.1_FGP005 RPPAVAS--------------------------------------V-DL-GAPFHVH-G-GRMZM2G416045 SPPAS----------------------------------------F-EP-ETMIQVP-N-GRMZM2G343426 SPPTS----------------------------------------F-DP-GTMIQVL-G-GRMZM2G091176 SPPTS----------------------------------------F-EP-GTMIQVP-G-GRMZM2G175910 DRPGAGADVGA---------------------------------SA-GA-TTCYTVP-E-GRMZM2G006565 DNPASVLTRGT----------------------------------P-DP-DAVFTVP-E-GRMZM2G306328 DNPASVLTRGT----------------------------------P----DAVFTVP-E-GRMZM2G085054 DKGYLPVRGESV----------------------------------------QVDFV-G-GRMZM2G161335 DKGYLPVKEER----------------------------------------KEDPVP-E-GRMZM5G815665 DAGFVPVKEER----------------------------------------LDEPVP-D-GRMZM2G097030 ADGYLPIKEER----------------------------------------LDEVVP-G-GRMZM2G463996 DKGLLPPTSKDKSQ-------------------------------------LDIPLD-G-GRMZM2G156127 DKGYQPAQESQ----------------------------------------LETPVT-E-GRMZM5G892627 DKGYLSSHVAESQE-------------------------------------PDMLVT-E-GRMZM2G173926 EKGYLPPQESQ----------------------------------------LCTPVP-E-GRMZM2G047910 EKGYLPPQESQ----------------------------------------LCTPVP-E-GRMZM2G117878 DRGYLPATESN----------------------------------------LHMPVK-E-GRMZM2G022242 GDTIRKDIGDHAA------------------------------SR--ADEPLAS-YP-G-GRMZM2G165390 TDALREDVGDQAA------------------------------NR--VDEPLIS-HP-G-GRMZM2G319965 DALLRLLG-LDDG------------------------------GGRGHGQHEVT-LP-G-GRMZM5G832805 GETVA----------------------------------------AADPAHEVS-LP-G-GRMZM5G896260 GASVAA--------------------------------------HAADPAHEVR-VP-G-GRMZM2G106443 DDDH-------------------------------------------ARAREVS-LP-G-GRMZM2G475884 GALLDSCA----G------------------------------DADADPNATVR-LP-G-GRMZM2G344993 AGVV--------A------------------------------DHLHDPSFVVE-MP-G-GRMZM2G316030 RDAV--VA----A------------------------------AASGDPCAEVG-LP-G-GRMZM2G363554 GGVDA-AV----A------------------------------AAGGDPWAGVR-FP-G-GRMZM2G457929 DGVDR-AI----A------------------------------AAGGDPWASVR-FP-G-GRMZM2G050748 AEFPREDD-LEAR--------------------------------F-------M-LP-G-GRMZM2G304712 VEFPPEDD-LDAR--------------------------------F-------T-LP-G-

Page 16: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

GRMZM2G417945 VEFPPEDD-LDAR--------------------------------F-------T-LP-G-GRMZM2G022101 EGFPTEADTAAPV--------------------------------A-------V-VP-G-GRMZM2G055446 ADFPSREAGPGAM--------------------------------V-------A-VP-G-GRMZM2G073244 AAFPSKEAGPDAP--------------------------------V-------D-VP-G-GRMZM2G024131 LAVPPGAAADGSD------------------------------GGAGAAALSEA-FL-G-AC199541.4_FGP007 APL--PMADGGAL------------------------------RRR-------R----V-AC199541.4_FGP001 VALPL--ADGA--------------------------------ALR-------G----R-AC199541.4_FGP004 VALPL--ADGA--------------------------------ALR-------G----K-AC199541.4_FGP002 VALPL--ADGA--------------------------------ALR-------G----K-GRMZM2G334336 LPLPLPVVDGKEL------------------------------FAR-------G----L-GRMZM2G095280 LP--LPVVDGKEL------------------------------FAR-------G----L-GRMZM2G035282 LP--LPVVDGKEL------------------------------FAR-------G----L-GRMZM2G063042 LP--LPVVNGKEL------------------------------FAR-------G----L-GRMZM2G171548 LRVPVDGV-------------------------------------L-------R-LP-G-GRMZM2G022212 VE-PPLPLGEEQL--------------------------------E-------P-LP-G-GRMZM2G078465 VPVPPLPLRPEEA------------------------------RGL-------A-LA-G-GRMZM2G110816 AKGFVSESGTLLPADG--T----------KNIG------D------------LNILP-A-GRMZM2G159918 SKAFISASGAPLPPPS--T----------NGVD------DEDQ-ANKHQNIGDPILP-S-GRMZM2G021786 EKGLISESGTPISSSS--T----------DSDE-----------QDARTVRGLHILP-A-GRMZM2G432291 DKGLISDYGIPISTKR--L----------DIGE------EGKVNGDHRTSDSLHVLP-A-GRMZM2G098892 EDGILDETG------------------------------------NVRRNERVQLDS-K-GRMZM2G098890 EDGIIDESA------------------------------------DVRRNEKIKLSP-N-GRMZM2G328224 SDGVLDERG------------------------------------WPKRRGAFQLAP-A-GRMZM2G031138 QDGLLDDKG------------------------------------LPVRQETFQLAP-G-GRMZM2G030821 EEGYFCDKGLR-SKCIDLAATLKLTHLSVQQIN----------AGFPKRHGLFELAP-G-GRMZM2G130256 ADGMLDKDGLP----------------------------------TGK----QIPPV-G-GRMZM2G363545 RDGVIDDDGAP----------------------------------VKQENHSFRLAE-S-GRMZM2G128504 QDKIIDPQDGS----------------------------------A-LSQGTFQLSP-D-GRMZM2G046994 QDKIIDPQDGS----------------------------------A-LAQGTFQLSV-D-GRMZM2G004858 PVDGHQGEEG--LSC-----------------------------RSL----DQYLPF-P-GRMZM2G073376 AWLTNSEHAPESGETIGNS--------------D----------QRL----GHYIAG-Q-GRMZM2G440902 PAAAGGGASPGTSSCATRTNIVLLWHVNISANSSRALYADITGSCFV----ENYIPG---GRMZM2G173315 KHGHFKCKDPRKD-------------------------------------TITYI-P-G-GRMZM2G337048 QNGHFRCNEPRKD-------------------------------------TITYI-P-G-GRMZM5G834303 ALGELPFPE----------------------------------GGDLDA-PIRGV-P-G-GRMZM2G083130 AREVIPLRP---TY--------------------------ET-DGSLDA-PLDWV-P-G-GRMZM2G476049 ------------------------------------------------------------GRMZM2G049798 ERGYVPLKD--ESF--------------------------LT-NGYLETTVIDWI-P-G-GRMZM2G118657 QRGYTPLND--ESY--------------------------LT-NGYLDT-PIDWI-A-G-GRMZM2G169628 RRGYVPLKD--ESD--------------------------LT-NGYLDT-AIDWI-P-G-GRMZM2G470524 DRGYVPLKD--ESY--------------------------LT-NGYLDT-VLDWV-P-G-GRMZM2G089241 QWGLVPFRD--EAQ--------------------------LADDAYLDT-VVRGT-R-G-GRMZM2G373124 ARGIVPLKN--EAQ--------------------------LT-DGYLDT-VVDWI-P-C-GRMZM2G083935 ERGMVPLKN--EEQ--------------------------LT-DGYLDT-IVDWI-P-G-GRMZM2G041699 SRGLAPLKSAGVEQ--------------------------LT-NGFLDT-AVEDV-P-G-GRMZM2G132706 DRGIIPLKD--EEQ--------------------------LT-NGFMDT-PVDWA-P-G-GRMZM2G009125 EKGIFPLKD--AEQ--------------------------LT-NGFLDT-PTDWA-L-G-GRMZM5G870067 DKGIFPLKE---EH--------------------------LT-NGFLDT-PVEFAPP-G-

GRMZM2G426242 IP-GE-P--VYQWREVSM--LYRWFVEGGEEDEQAREPVRRNF-LWNV---------EESGRMZM5G854655 LP--P-FEFRFARRQLPI--HFQPSSS-I------PEDRHREL-REFE---------LAVGRMZM2G179063 LP--A-FDCRVSRAQLPQ--HFAPSTS-M------GGGTLQEI-REFD---------VAVGRMZM2G035755 LP-PP-FRLRLSRRQLPP--HFMPTTS-V------AGKALQGI-RDFD---------VAAGRMZM5G888620 LP-RR-V--ELRRSQMME--PKKR---PE------RWAFFQRM-NAAD---------QRSGRMZM2G113653 LP-DA-V--RLTRSRLAEATL----PGAH------SREFLSRM-FDAE---------RVTGRMZM2G178209 FP-TP-L--ELTKARCPG--SVSV---PG------LDQIRKKM-YEEE---------MRSGRMZM2G325014 FP-IH-V--EMSRARSPE--NFSG---FG-------KVFADEV-MAEN---------ARAGRMZM2G325023 FP-ID-V--EISRARSPG--NFTG---PG------MKEFGEEI-MAES---------ARAGRMZM2G067361 LE-KR-V--EVSRAQAPG--FFRG--MPG------FEKFADDV-EQVL---------TEAGRMZM2G148277 LE-KR-F--VVTRAQAPGGSFFRGIPVPW------WEEFADYV-ERAQ---------AEAGRMZM2G403740 LE-RR-V--LVTRAQASG--FFRE--VPG------WEDFADYV-ERAR---------AEAGRMZM2G008935 MP-VH-V--EVTKATAPG--FFNS--P-G------WEALRGEC-VEAM---------RAAGRMZM2G151332 MP-VH-V--EVTKATAPG--FFNS--P-G------WEAVRGEC-VEAM---------RAAGRMZM2G479038 FP-VR-A--AGNVATFRG--FFQW--P-G------MESYERDV-AEAE---------ATAGRMZM2G338465 FP-VP-A--LANRATFRG--FFQW--P-G------AEGFQRDV-AEAE---------ATAGRMZM2G458776 FP-VH-V--VVNRATSLG--FFQW--P-G------MEKFRRET-LEAE---------ATAGRMZM2G056335 FP-VR-A--VVNRATSLG--LLQW--T-G------FERFRRDT-LDAE---------ATAGRMZM2G007012 FP-VR-A--VVNRATAQG--VFQW--PAG------MERFRRDT-LDAE---------ATAGRMZM2G389944 FP-VR-A--VVSRATAQG--LFQW--PAG------MERFRRDT-LDAE---------ATAGRMZM2G067424 GFPRP-V--TIHRAQVNE----------------EALAHLPLF-RAAE---------AQS

Page 17: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

GRMZM2G074395 LPGKE-I--TIPVSELPT--FLVQDDHL------S--KAWQRM-RACQ---------LTGGRMZM2G037545 FPPPE-I--QVPTTELPE--MLRRQETA------DDRATGNAV-HAAH---------RRCGRMZM2G082037 LPEPE-I--RIPVSELPE--FLRRPAK--------GQGTLNPC-NAAM---------ARCGRMZM2G042865 LPGPE-I--RIPVSELPE--FLRRPAK--------DQGTFSPC-NAAQ---------ARCGRMZM2G051474 C-----V--PIHAHELPT--SMLADRSS-SAYAGFLSMA-KGV--------------AGVGRMZM2G372068 C-----V--PIPGPDIIS--P-LQDRSN-PSYAVMVNLA-VRC--------------REAGRMZM2G085854 C-----V--PLPGTETMK--P-LQDKSN-PSYRWMVHHG-AKF--------------REAGRMZM2G426415 C-----V--PVPGPDVLM--P-LQDKAD-PCYRWMVHHG-AKY--------------RDAGRMZM2G156026 G-----V--SLRREDLPS--G-FRDSKE-STYAQLIDAG-RQY--------------RTAGRMZM2G007795 G-----L--VLHHADLPE--G-FQDRKD-PVYAYHVEEA-RRY--------------GRAGRMZM2G455075 M-----P--PVPVASMPS--PD-----V-NDYTWFAYYG-RRF--------------LETGRMZM2G039129 L-----P--PVPASCLPT--GLDN-RKI-PTYRWFLYNG-RRY--------------MEAGRMZM2G113794 L-----P--PVPASCLPT--GLEN-RKI-PTYRWFLYNG-RRY--------------MEAGRMZM2G095261 L-----P--PVPPDSMPC--PVAD-KRS-PNYACFVRLG-DRF--------------MDAGRMZM2G063550 M-----P--PVPARLMPS--PLMR-KD--PNFAWLVYHG-KRF--------------MEAGRMZM2G415973 M-----P--PVPAAFLPN--AVMK-RD--SGYTWSMYHA-NRF--------------MEAGRMZM2G395508 L-----P--PVPAASVPG--FLGR-KDS-PNFTWFVYHG-RRF--------------MDAGRMZM2G324466 L-----P--PVPPLALPT--PIMR-REL-PECKWYAYHG-RRF--------------ADAGRMZM2G131928 L-----P--PVPPLALPT--PIMR-REL-PECKWYAYHG-RRF--------------ADAGRMZM2G155911 L-----P--PVPPSSLPV--PVMD-KNH-PNYTWFMYHG-RRF--------------AEAGRMZM2G095807 V-----P--PMPASHLIP--EVLEDPGT-EIYKAMMNSL-SKN--------------LEAGRMZM2G096412 V-----P--PIPASHLVR--QMLD-PES-EIYTAMMNAMRRGA--------------EDPGRMZM2G060993 V-----P--PMPASYLMP--PMLDDPAS-ETYKTMMRVS-RRN--------------PEPGRMZM2G449019 V-----P--PVPASHLNA--ELLERPE-EELCSTVASVF-RRG--------------MDTGRMZM2G043295 V-----P--PFPASHLVR--ELLEHPDDDELCKTMVDVW-KRC--------------TDGGRMZM2G381025 V-----P--PMPASHLAT--SLLESPE-DELCRTSMEIL-ERN--------------AGTGRMZM2G122072 V-----P--PIPASHIIR--EMLEDAE-DEVRTAMAKIW-KRD--------------TDTGRMZM2G051683 I-----P--PFPATHAIL--PVME-RDD-AAYDGFVKGC-ADL--------------CRSGRMZM2G010987 I-----P--SFPATHCIL--PTME-RDD-VAYDGFLKGC-TDL--------------CRSGRMZM2G130119 V-----H--PVPASDLPE--VLLLGPRN-EQYRATIGLF-EQL--------------PRAGRMZM2G105991 V-----P--PLTVADLPQ--GVLN--DS-EACRVIMGAA-ARM--------------PDAGRMZM2G058314 V-----P--PIPASDMPH--TVLD-RAA-RTCASRIVHY-GRV--------------PEAAC206788.3_FGP015 M-----P--PVRAMDMPL--TVQD-RDS-DRTKVRMYQF-RRI--------------PEGGRMZM2G036409 V-----P--AVRALDMPD--TMHD-WES-DVGSVRLRQL-ARM--------------PEAGRMZM2G111344 V-----P--PIRALDMGA--TMQD-RDS-DVAKARLSQC-ARM--------------LEAGRMZM2G163519 --PFQ-G--VGLGGAEEE--AKYT-------SL--LLREHPDG-LVPERDRLLLSLARSSGRMZM2G174192 --PFR-G--VGFGSAEEE--AKYM-------AQYILREELPDA-LVPERNRLLLSLARSSGRMZM2G061321 YVPFPTT--VAHRSFEAR----EL-------FKPGL--VPDDS-GVSEGHRFGVSIG-ESGRMZM2G135722 YVPFPTT--VAYRGLEAR----EF-------FTPVL--APDES-GVSEGYRFGKCIE-QSGRMZM2G061289 YVPFPTT--VAYRGLEAR----ES-------FTLVL--APDES-GMSDGYRFGKCIA-ESGRMZM2G180283 --------------------------------------IPDPS-VLPMFRPFVETFK-RCGRMZM2G066067 --GKPAA--AP--RYESE----QN-------KQYSA--KDGAS-GVSIAERYFLTRE-RCGRMZM2G022266 PAERPAG--VL--PYEWD----KR-------AHFFG--PQRAS-GMSTAQRCFLTLQ-RCGRMZM2G162755 S---A-----------LP--PALL----DV-NKLFTKQFIDNG-R---------AIV-KAGRMZM2G383404 S---C-----------LP--QVLL----HL-DKLFTKQFIANG-R---------EII-NAGRMZM2G162783 S---S-----------VP--QALH----DP-DHLFTQQFVANG-R---------CLV-ACGRMZM2G099740 S---S-----------VP--QALH----DP-DNIFTRQFVANG-R---------ALA-TAGRMZM2G154558 F---PQI--SVRRSQLSD--QLAA--A-DGK-DTRSTFIRKQI-A---------FFS-RAGRMZM2G082249 F---PDV--VLHRTQIPR--FILS--A-TGA-DPWTAFFRRVI-A---------SCR-KTGRMZM2G159404 Y---PEV--VIHRSQLSK--NASA--P-PAVSNCAAGFYGRQI-P---------LGY-ETGRMZM2G086925 -------------------------------NSFVTEEFLATV-GKRA--RWAQSIP-CSGRMZM2G075387 -------------------------------DACATPEFVALA-RQMG--QER-RRA-PGGRMZM2G120016 -------------------------------GACMPREFVEYI-VRTQ--EDS-RSP-AFGRMZM2G168474 -------------------------------DACMSREFVDLV-FRME--EEE-QGA-PVGRMZM2G110511 -------------------------------DDCMSREFVDLV-FRME--EEE-QGA-PVGRMZM2G160523 E---PSY--QWRELLMM-----YRNY--------MAGALDEQV-GASVRQNFMWNLH-DSGRMZM2G301148 S---PTF--PWRHLSGL-----FRQY--------AAGD---EV-SEAIRQLFLWNLG-SDAC234524.1_FGP005 M---PEH--VAITADEVP--DVVVKFA-DMKD-PVTRFFIDEV-G--------FSDV-LSGRMZM2G416045 M---PVH--AAVRAEEVP--NGVTKRA-DPDN-PFMRFFMDEI-G--------DS-V-RSGRMZM2G343426 M---PEH--VAVRAEEVP--DGVTKRV-DPDN-PFMRLFMDEI-G--------DSDV-RSGRMZM2G091176 M---PEH--VAVRAEEVP--DGVTKRA-DPDN-PFTRFFMDEI-G--------DSDV-RSGRMZM2G175910 F---PHL--QFSLRDLV------PPPP-------QMIHLDAKM-A--------AAVA-ASGRMZM2G006565 F---PDV--RLALADIP------FPFN-DPATTGPTREMDAKI-G--------HAIA-SSGRMZM2G306328 F---PDV--QLALADLA------FPFN-DPATTGPTREMDAKI-G--------HAIA-SSGRMZM2G085054 G-----G--EVRVRLDLP-------TC-----LYIMVWIGCVN-RS-N------------GRMZM2G161335 L-----P--PYLVKDLLR--V-DTSDL-----EEFAELLARTV-TA-AR---------RAGRMZM5G815665 L-----E--RLRARDLIR--V-DGSDT-----DALCGFIARVA-DA-VR--------ASAGRMZM2G097030 L-----E--PLRVRDLIR--V-DGSDD-----ETVLRFITRNA-EA-VR--------ASSGRMZM2G463996 L-----T--PLRLRDMVF--S-PTTTH-----ANMTECLKCLV-DA-TR---------SCGRMZM2G156127 L-----P--PYRVRDLPS--T-TSACH-----GVISEVISRLV-TA-VT---------TSGRMZM5G892627 L-----P--PYRVRDMPS--A-SGATL-----GLMRDLISRAV-TA-VN---------AS

Page 18: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

GRMZM2G173926 L-----P--PLRVKDLIY--S-KHSDH-----ELMRKVLARGS-ET-VR---------DCGRMZM2G047910 L-----P--PLRVKDLIY--S-KHSDH-----ELMRKVLARGS-ET-VR---------DCGRMZM2G117878 L-----P--PLQVRDLFD--PSKLPNK-----EIVQKILGRAT-ES-TT---------NSGRMZM2G022242 L---G----MYRVRDLPF--GDAGAGG--DMYRVMTTLLGRVA-ER-V--------PRAAGRMZM2G165390 L---A----SYRVRDLPD--GVV--SG--DFNYVINLLVHRMG-QC-L--------PRSAGRMZM2G319965 L---H-R--PLRARDMPT--FLSEEKSQDGLSKMVLQSLRELF-QK-MDQEQ----EENKGRMZM5G832805 L---R-R--PLRVRDFPS--YLVDTTGS-PLARSVVGMFRELF-ES-VD--------RWRGRMZM5G896260 L---R-R--PLRMRCLPS--FLTDTSGS-DRATALTDVFRELF-EF-LD--------RWRGRMZM2G106443 L---R-R--PLPVRDFPS--FLVDTTGS-VLAKVITEMFRELF-ES-MD--------RWRGRMZM2G475884 L-----P--PLKADALPS--FASMASPGSRN-YLTLDMLRDIF-LA-LDE--------HGGRMZM2G344993 L-----A--PQPVGDLPS--FLTDSTDPSNMFHSVFTTIRDLI-ET-LDKES------PRGRMZM2G316030 L-----P--PLRVRDLPS--FLAVTSE-DDPFAFVLPEFGELV-DA-LERDD--GSSEHPGRMZM2G363554 L-----P--PLRVRDLPS--FIVSTSE-DDPYAFVADAFRELV-GR-LDGGE------DSGRMZM2G457929 L-----P--PLRVRDLPS--FIVSTPE-NDPYAFVADAFRELV-ET-L-GRE------DKGRMZM2G050748 L---P----TLSVADVPS--FLH-ASH---PYKVLGDTIQDQF-RN-M---G------KAGRMZM2G304712 L---P----EMSVADVPS--FLL-PSN---PYKLLVDAIIAQF-HN-I---H------RAGRMZM2G417945 L---P----EMSVADVPS--FLL-PSN---PYKLLVDAIIAQF-HT-I---D------RAGRMZM2G022101 L---P----TLAADELPL--MVR-PEH---AGNLWGQTLRAQL-AG-FRKNN------TVGRMZM2G055446 L---P----PLAAGDLPA--LIH-A-P---EEIMWRQVLIADL-RS-LR--E------TVGRMZM2G073244 L---P----TLAAGDLPA--LIH-E-P---EENIWRQALLSDF-RS-LR--E------TVGRMZM2G024131 L---P----EMERSELPS--FVF-DHG---PYPTIAMQAIKQF-AH-A---G------KDAC199541.4_FGP007 I---S-V--DLGAEDLPP--FVV-APE---IYAQYLKVSIGQF-EF-L---D------AAAC199541.4_FGP001 L---A-V--ELGPDDVPP--FVA-APE---WYPAFTESALSQF-DG-L---E------HAAC199541.4_FGP004 L---A-V--ELGPDDVPP--FVA-APE---WYPAFTESALSQF-DG-L---E------HAAC199541.4_FGP002 L---A-V--ELGPDDVPP--FVA-APE---WYPAFTESALSQF-DG-L---E------HAGRMZM2G334336 L---D-V--DLGRDDVPP--FAA-RPD---WCPVFLRATVRQF-EG-L---E------DAGRMZM2G095280 L---G-V--DLGPDDVPP--FAA-RPD---WCPVFLRATVRQF-EG-L---E------DAGRMZM2G035282 L---G-V--ELGPDDVPP--FAA-KPD---WCPVFLRASLRQF-EG-L---E------DAGRMZM2G063042 L---G-V--ELGPDDVPP--FVA-KPD---WCPLFLRASLQQF-EG-L---E------DAGRMZM2G171548 L---P----ALDPDGLPS--FLKVGTG---LYPAYFEMVVRQF-QG-L---E------QAGRMZM2G022212 L---P-G--GLRPCDLPT--FLT-DKD----DRAYLDLLVSQF-VD-L---D------TAGRMZM2G078465 L---S-T--QLEVDDMPT--FLG-DTR---FPPCFRELLMNQF-LG-L---D------TAGRMZM2G110816 K-----L--KLRFKDLPW--LLDSALP----QKSRISFWLQAL-DR-A---------KSLGRMZM2G159918 K-----L--QLSTKDLPW--LVGGAAS----QQSRFAFWKRTV-DR-A---------KRLGRMZM2G021786 Q-----V--ELRVEELPW--LVGDSAT----RRSRFAFWLQTL-HR-A---------RGLGRMZM2G432291 Q-----L--GLSTAELPW--LVGDAAS----QKTRFTFWLQTM-ER-A---------KSFGRMZM2G098892 M-----P--AIDASKLPW--TSLGKSP--ESRRAMIQSTLTT--NPTL---------SLAGRMZM2G098890 M-----P--VIDAADLPW--SKFDGSP--EIRRIMVKGIVKS--NPTL---------ARAGRMZM2G328224 M-----P--AIDTSEFSW--NRAADAK---GKPIIFQLILRNN-AA-T---------HLAGRMZM2G031138 M-----P--PLHSSQLSW--NNAGEPE---GQHIIFELVTRNN-KLND---------ELAGRMZM2G030821 M-----P--PMCPSQMPW--SIDGDVA---GQEVAYQLVTRNT-QAAR---------VHAGRMZM2G130256 D-----L--PMNLAPLAW--NAAGTEE---AQKQIFRCLNNILKALGQ---------DIVGRMZM2G363545 M-----P--PMDAVFLAW--NYMGNRD---VERMVFHYLTTTAW-AAV---------AKAGRMZM2G128504 M-----P--VMQTSHLAW--NCIGNHD---GQEALFRYLRAG-V-RAV---------EECGRMZM2G046994 M-----P--VMQTSQLAW--NCIGNHD---GQEALFRYLVGG-I-RAV---------DKCGRMZM2G004858 A---L-A--PVKCSDMKT--LRSMVLP--------MKR-LAQV-FSNL---------RKAGRMZM2G073376 A---S-S--SIRLSDLEP--LIHNKRT--------VKH-ILTT-ISSI---------RNAGRMZM2G440902 ----T-K--SIRFADLAP--THTDALL--------LDK-ILEA-HSSV---------KKAGRMZM2G173315 V-----A--SIEPSELMS--YLQDTDT----TSVVHRIIFRAF-DE-A---------RRAGRMZM2G337048 V-----A--AIEPSELMS--YLQETDT----TSIVHRIIFKAF-DE-A---------RGAGRMZM5G834303 M---E-S--FLRRRDLPI--QFRQLTS--TYEEPLVAAVVAAT-VHSC---------CKAGRMZM2G083130 M-----K--AVRLRDLPT--FCHTTDA----DDWLVHFHVHQM-KT-A---------AASGRMZM2G476049 ----------MRLIDFPS--FIRTTDP----DDAVLALVLRSM-ECHR---------TVPGRMZM2G049798 V-----P--PIRLGDFSS--FLRTTDP----DDFGLRFNESEA-NS-C---------AKAGRMZM2G118657 M-----P--TLRLGDISS--FVRTLDP----QCFALRVEEDEA-NS-C---------ARAGRMZM2G169628 M-----P--DIRLKDIPS--FIRTTDR----DDVMLNFDGGEA-QN-A---------RRAGRMZM2G470524 M-----R--GIRLRDMPS--FIRTTDP----DEFMVHFDSGEA-QN-A---------RRAGRMZM2G089241 M---C-D--GMRLRDFPS--FIRTTDR----GDIMLNFFIHEA-GR-L---------SLPGRMZM2G373124 A---P-K--DLQLRDFPS--FVRTTDP----DDIMLNFFIHEV-EA-M---------SQAGRMZM2G083935 A---P-K--DLRLRDFPS--FVRTTDP----NDVMLNFFIHET-EG-M---------SQAGRMZM2G041699 ----L-R--NMRFRDFPS--FIRSTDP----DEYMVGYVLQET-GR-T---------AGAGRMZM2G132706 M---S-K--HMRLKDFPT--FLRTTDP----NDVLMTFQLQEV-ER-S---------EYAGRMZM2G009125 M---S-K--HTRLKDFPS--FVRSTDP----DEFMFHFALKVT-EQ-I---------VGAGRMZM5G870067 M---S-K--HMRLKDFPS--FMRSTDP----DEFMVHYAVRVT-DH-T---------AGA

GRMZM2G426242 -WGFVFNTLRALEGRYLEQPLEDLG--------FR---RMWAVGPVAPDADA-------AGRMZM5G854655 -DGIVVNSFEELEHGSVSRLAAATG--------KA----VLSVGPVSLCGAAAPPSL--LGRMZM2G179063 -DGVVVNSFEELEHGSCELLAAATG--------KT----VVAVGPVSLCHQHP---M--TGRMZM2G035755 -DGFVVHTFEELESGSTALLAEATG--------KK----VIAVGPVSLCCAPS---L--DGRMZM5G888620 -YGEVFNSFHELEPDFMEHYTTTLG--------RR----AWLVGPVALASKDV-------

Page 19: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

GRMZM2G113653 -AGWVVNSFADLEQRYIEHYEKDTG--------KP----VFAVGPVCLVNGD-GDDALERGRMZM2G178209 -SGVVINSFQELEALYIESFEQVTG--------KK----VWTVGPMCLCNQD----SNTMGRMZM2G325014 -DGLVVNSFAELEPLFVDAYEAALG--------KK----IWAVGPLFLQRNM----P--LGRMZM2G325023 -DGLVVNSFAEMEPMFVDAYEAALG--------KK----VWTIGPLFLAPTM----P--LGRMZM2G067361 -DGIVTNSFVEMEPEYVAGYQEARA--------MK----VWTVGPVSLFHQRAATLAS--GRMZM2G148277 -DGIIINTFLELEAEYVAGFAAARD--------LK----VWTVGPVSMYHMSRTTLASTLGRMZM2G403740 -DGVVMNTFEEMEPEYVAGYAAARG--------MK----VWTVGPVSLYHQRAGTLAA--GRMZM2G008935 -DGAVVNTFVGLEGQFVSCYEAALG--------KP----VWTLGPLCLRNR----DADTMGRMZM2G151332 -DGAVVNTFVGLEGQFVSCYEAALG--------KP----VWTLGPLCLRER----DADAMGRMZM2G479038 -DGLLINTFRGLEGVFVDGYAAALG--------RKTTTTCWAVGPTCASSSG-GLDAGATGRMZM2G338465 -DGLLLNTFRDIEGVFVDRYAAALG--------RK----TWAIGPMCA--SG-GLDADARGRMZM2G458776 -DGLLVNTCSALEGAFVEGYAAELG--------RK----VWAVGPLCLIDT--D--ADTMGRMZM2G056335 -DGILFNTCAALEGAFVERFAAELG--------KR----IWAVGPVCLVDS--NA-ARATGRMZM2G007012 -DGILFNTCAALEGAFVERFASEVG--------KK----IWAVGPLFLLGS--GSDAGGMGRMZM2G389944 -DGILFNTCAALEGAFVERLASELG--------KK----IWVVGPLCLLSS--DSDAGAMGRMZM2G067424 -CAVVFNSVAALDADFAAYYRSQLP--------G-TPKEVFLVGPTVSPSPL------AVGRMZM2G074395 -FGVIVNTFADLEQPYCEEFS--RV--------E--ARRAYFVGPLGKPSRS------TMGRMZM2G037545 -FGLAVNTFFDLEHGHCETFV--GN--------G-YVKRAYFVGPLSLSPSPS---SPVAGRMZM2G082037 -LGVAYNTFAGLEQEYREASM--RV--------A-SLKRSYFVGPVSLPLPP--------GRMZM2G042865 -LGVAYNTFAGMEQEYREANV--RA--------K-SLKRCYFVGPVSLPLPA--------GRMZM2G051474 -DGVLVNTFRELEPAVG---------GD-----GRLQLPVYPVGPLVWTRPAGVD-----GRMZM2G372068 AAAILVNSFDAVEPEAAEALRHPAE---------PGWPPVYPVGPLILQSESGGT-----GRMZM2G085854 -TAILVNSFDAVEPGPAEVLRQPEPGRP-----P-----VRTIGPLVRAEDGGGS-----GRMZM2G426415 -HAILVNSFDAVEPGPAKVLRQPESGGP-----SRRWPAVYPIGPLIHAD-GGRK-----GRMZM2G156026 -AGILANAFYEMDPATVEEFKKAAEQ--------GRFPPAYPVGPFVRSSSDEGS-----GRMZM2G007795 -NGFLVNSFEELEVVMVETFKRDAED--------GAFPPVYPVGPFVRSSSSEEA-----GRMZM2G455075 -RGIIANTAAELEPGVLASIAGGRCTP------GGRAPTVYPIGPVLSPKPRV-VV----GRMZM2G039129 -TGIIVNTIVEVEPRVLAAIADGRCTH------GVPAPPVYSIGPPL-------------GRMZM2G113794 -AGIIVNTIAEAEPRVLAAIADGRCTR------GVPAPPVYSIGPVIPSTPPA-E-----GRMZM2G095261 -TGVIANTADELEPGPLAAVARGRCVP------GRPAPPVYPIGPVLSLGGR--------GRMZM2G063550 -DGVIVNTVAELEPSILAAIADGLCVP------RRRAPAVYPIGPVLPLKPPS-AP----GRMZM2G415973 -AGIIINTVAELEPEALAAVADGRCMP------GRRAPTIYPIGPVIAFDPPA-------GRMZM2G395508 -DGIVVNTVAELEPGLLAAIAGGRCVP------GRPAPPLYPIGPVLNLGAGG-G-----GRMZM2G324466 -DGILVNTAAELEPGVLSAIARRG-AG------CPAAPALYPVGPVVSFAPPT-------GRMZM2G131928 -DGILVNTAAELEPGVLSAIARRG-AG------CPAAPALYPVGPVVSFAPPT-------GRMZM2G155911 -DGIIVNTAAELEQSVLAAIADGRCTP------GVRAPTVYPIGPVISFSPPP-TN----GRMZM2G095807 -GGILVNTFASLEARAVAALKDPHFLAES----RLRMPPVYCVGPLVEKAAETK------GRMZM2G096412 -DGILVNTFASLEARAVGALRDPQLVPPSSG-RARRTPPVYCVGPLVAGAGA--------GRMZM2G060993 -EGILVNTFASLEGRVLRALRDPLFLPIGDD-GCRRMPPVYCVGPLVVGAGDGDGV----GRMZM2G449019 -RGVLVNTFQALETRALQALGDPRCVPG-----KAALPPIYCVGPLVGNSARDPP-----GRMZM2G043295 -SGVLVNTFESLESPAVQALRDPRCVPG-----R-VLPPVYCVGPLIGGDGGTRAA----GRMZM2G381025 -HGVLVNTFESLEQRALQALRDPLCVPG-----Q-ALPPVYPIGPLVGTGTGRQE-----GRMZM2G122072 -RGVLINTFYSLEAQALQAFSDPLCVPG-----K-VLPPVYPIGPLVGKGGSGTD-----GRMZM2G051683 -QGVLVNTFRLLEQRAVETVAAGHCTPP-----GLPTPPIYCIGPLIKSEEV--------GRMZM2G010987 -QGIMVNTFRSLEQRAVETVAAGHCTPP-----GLPTPPIYCIGPLIKSEEV--------GRMZM2G130119 -KGILANTFEWLEPRAVRAIEQGSPR-P-----GEPVPRLFCVGPLVGEERG--------GRMZM2G105991 -RGILINSFESLEPRAMRALRDGLCV-P-----GRATPPVYCVGPMVSPGGD--------GRMZM2G058314 -RGLLINTYEWLEARAVGALRDGVCV-P-----GRPTPPVYPIGPIIVRGQE-AA-----AC206788.3_FGP015 -RGVLVNSFAWLEPRALRALGDGVCV-P-----GRPTPRVFCVGPLVNDGSS-TA-----GRMZM2G036409 -AGILVNSFEWLESRALEALRGGHCL-P-----GRSTPKIYCVGPLVDGGGSGTE-----GRMZM2G111344 -RGILVNSFDWLEARALEALSRGLCT-P-----GRSAPPVHCIGPLVLAGNKG-------GRMZM2G163519 -GFVAIKTCADIERPYMGYLSEL-----L-----GG-KEMVPIGPLLVDGSD--------GRMZM2G174192 -AFVAVKTCADVERPYMDYLSEL-----V-----GGNKEMVPVGPLLVDADAAAAA----GRMZM2G061321 -QIVGIRSRTELESEWLQVLGKL-----Y-----K--KPVIPIGLFPPP-PTQD------GRMZM2G135722 -QLVGIRSSAEFEPEWLQVVSGL-----Y-----Q--KPVIPVGLFPPPPPTQD------GRMZM2G061289 -QLVGIRSSAEFEPEWLQVVGGL-----Y-----Q--KPVIPVGLFPPP-PTQD------GRMZM2G180283 -KVIAARSSFELEPESLPLMTKI-----L-----G--KPVIPVGLLPPAPAGGN------GRMZM2G066067 -TIMAIRSSHEWEPEFLPLVAPL-----V-----G--KPVLPLGLLPPSPDGGR------GRMZM2G022266 -RLLAMRSCPEWEPENFTVAAAL-----L-----G--KPLVPLGLLPPSPNGGR------GRMZM2G162755 -DGVLVNTFDAVEPAPLAALRGG-----K---IVPGYPPVYTIGPLKSHAT---KA----GRMZM2G383404 -DGFLVNTFDALEPVALAALRDG-----K---VVPGFPPVYAIGPLMSQQNSVDEG----GRMZM2G162783 -DGILVNTFDAFEPDAVTALRQG-----S-ITVSGGFPPVFTVGPMLPVRFQ--------GRMZM2G099740 -DGLLVNAFHAMEPEAVEALQGR-----F---VLSVLPPVFAVGPLMPVNDLRETG----GRMZM2G154558 -DALIVNTAENLEPKGLTMLQQW------------FNVPAYPVGPLLRTTVAASSS----GRMZM2G082249 -DALLVNTVRELEPSGLDMLRRS------------FGVQPWPIGPVLAEPTAPSSD----GRMZM2G159404 -GAVLVNTVEEFEPTGLDMLRRT------------LKIPVWPIGPLVRAANLPVSP----GRMZM2G086925 -VGILANTCRALEGEFIDIFAQQ-----L----AAAGKNLFVVPLNPLLLPDARSP----GRMZM2G075387 -AGMVVNTCRALEGDFLDALRGI-----P----SSDGPRLFAVGPLSPVLPLPG------GRMZM2G120016 -AGVVANTCRAIESEFIDVVAGD-----P----ENRGKRVFAVGPMNPLLNVTA------GRMZM2G168474 -AGLVMNTCRALEGEFLDVVAAQ-----P----PFQGQRFFAVGPLNPLLLDADAP----GRMZM2G110511 -AGLVMNTCRALEGEFLDAVAAQ-----P----PFQGQRFFAVGPLNPLLLDADAR----

Page 20: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

GRMZM2G160523 -WGFVFNSFRALEGRYLEQP--L-----E----DLGFKRAWAVGPVAPEADAAVAR----GRMZM2G301148 --CFVANTFAALEADCVTRP--L-----P----DLASKRVFAVGPLSDA-SASADR----AC234524.1_FGP005 -WGVLVNSVAALDEDYVASLESF-----Y----LHPGSRAWVSGPLFLAAGDVSEL----GRMZM2G416045 -WGVLSNSLDVLDAAYVSALELF-----Y-----EAGARAWLVGPLFMAAGDMLNG----GRMZM2G343426 -WGVLNNSLDTLDAAYVSALESF-----Y-----EAGARAWLVGSLFMAVGDMPDS----GRMZM2G091176 -WGVLSNSLDALDAAYVSALESF-----Y-----ETGARAWLVGPLFMAAGDMPDG----GRMZM2G175910 -RGLIINTFRQLEGRYIEH---W-----N----QHIGPRVWPIGPLCLARQSYSPG----GRMZM2G006565 -HGLIVNTFDAMEGRYIQH---W-----N----RHIGPRAWPVGPLCLARTAEAAW----GRMZM2G306328 -HGLIVNTFDAMEGRYIQH---W-----N----RNIGPRAWPVGPLCLARTAEAAW----GRMZM2G085054 ----------QIRGAQGRRGR--------------RATPVPREGPAAARDVRPGG-----GRMZM2G161335 -SGLIFNTFPLIETDTLAEIHKA------------LSVPVFAVAPLNKLVPTATA-----GRMZM5G815665 -SGVVINTFERMEASELAKIQRE---------L--S-RPAFAVGPLHLLSQAPAE-----GRMZM2G097030 -SGVVLNTFEGIEGAALAKIRRE---------L--SGRPVFAVGPLHLASPDPAA-----GRMZM2G463996 -SGVIFNTFRDLEDSDLQRIANG---------V--VGVPIYPVGPLHKISPC--------GRMZM2G156127 -SGLILNTMDALECGELASLRRD------------FGVPVFDIGPLHMLSPA--------GRMZM5G892627 -SGLIINTFDALETDELASLRRG------------LAVPVFDIGPLHVHSPA--------GRMZM2G173926 -SGVVINTAEALEAAELGRLRDE---------LVHLPV-VLAAGPLHKLSSSR-------GRMZM2G047910 -SGVVINTAEALEAAELGRLRDE---------LVHLPV-VLAAGPLHKLSSSR-------GRMZM2G117878 -SGAILNTFEALESRELEMIRDE---------LADRGIPPFAVGPLHKLTAAPSN-----GRMZM2G022242 -TAVALNAFPGLFPEDVSAALA------------DALPNCLPMGPYHLLPGAAAA-----GRMZM2G165390 -AAVALNTFPGLDPPDVTAALA------------EILPNCVPFGPYHLLLAEDDA-----GRMZM2G319965 -PVVLVNTFGELEDVALRAVHPY----------MDVF----AVGPAVPVPGVLGGS----GRMZM5G832805 -PKVLVNTFDELEAGVLSEMKRH----------LDVF----AVGPMVAGAGG--GS----GRMZM5G896260 -PTVLVNTFDELEPDALAEVRRH----------LDVV----AVGPMVG------------GRMZM2G106443 -PKVLVNTLEELEAGVLAGMRRH----------LDLV----AVGPMLG------------GRMZM2G475884 -PTVLVDTFDALEPEALRAVPR-----------FNLI----AVGPVVVDE----------GRMZM2G344993 -STVLVNTCRELEVGALAAVGAH----------HDVL----PVGPVLPS-----------GRMZM2G316030 -TYVLANTCDAMEPDALASLRPH----------VDVF----PVGPVLSFLHEA-------GRMZM2G363554 -PSVLANTFDAVEPEAVASLREH---------GVDVV----PVGPVLSFLDDD-------GRMZM2G457929 -PSVLANTFDAVEPEAAASLREA---------GVDVV----PVGPVVSFLDDA-------GRMZM2G050748 -SWVFVNSFAELERDVIAALPSV----------RPRPPQLIPVGPLVELGDQD-------GRMZM2G304712 -SWVLANSFTELEPDVAAALPGV----------TPRPPELIPVGPLIEVGGG--------GRMZM2G417945 -SWVLVNSFTELEPDVAAALPGV----------TPRPPELIPVGPLIEVDEQHDG-----GRMZM2G022101 -AWVLVNTFEGLERPVVEALRSH----------APVT--P--VGPLLDHDHDHD------GRMZM2G055446 -TWVLLNTFDELERPTIEALRPH----------LPVI--P--VGPLCSGTESHGS-----GRMZM2G073244 -SWVLVNTADELEHAAIEALRPH----------LPVL--PLPVGPLLDME-KISA-----GRMZM2G024131 -DWVLFNSFEELETEVLAGLTKY----------LKAR----AIGPCVPLPTAGRT-----AC199541.4_FGP007 -ADVFVNSFRDLEPLEAEYMEST----------WRAK----TVGPALPSFYLDDG-----AC199541.4_FGP001 -DDVLVNSFRDLEPMEADYLEST----------WRAK----TVGPTLPSFYLDDG-----AC199541.4_FGP004 -DDVLVNSFRDLEPMEADYLEST----------WRAK----TVGPTLPSFYLDDG-----AC199541.4_FGP002 -DDVLVNSFRDLEPMEADYLEST----------WRAK----TVGPTLPSFYLDDG-----GRMZM2G334336 -DDVLVNSFRDIEPKEADYMSLT----------WRAK----TIGPTLPSLYLDDD-----GRMZM2G095280 -DDVLVNSFRDIEPTEADYMSLT----------WRAK----TIGPTLPSFYLDDD-----GRMZM2G035282 -DDVLVNSFHEIEPK-ADYMALT----------WHAK----TIGPTLPSFYLDDD-----GRMZM2G063042 -DDVLVNSFHDIEPKEADYMALT----------WRAK----TIGPTLPSFYLDDD-----GRMZM2G171548 -DDVLVNSFYELEPEEAEYMASA----------WRGK----TIGPTVPASYIGDD-----GRMZM2G022212 -DHVLVNSFYELQPQESDYMAST----------WRAK----TVGPAVPSAYL-DN-----GRMZM2G078465 -DHVLVNSFYDLEPQEADYLAST----------WRAK----MVGPTVPSAFL-DN-----GRMZM2G110816 -RCILVNSISKEGGAGGDSPDDQQ-QYDYEYLPQDQQQIMLHVGPLLFN-----------GRMZM2G159918 -PAILVNSFPGEGAGDSDRYD-----------P-PPGQRILHVGPLFNVNVSLAAG----GRMZM2G021786 -RWVLVNSFPAEAGCPAAAAAAAGDEDEDDGAHRQQGPRVIPVGAAL-LPA----G----GRMZM2G432291 -RSILVNTFPVEATAADAGTVS-----------QQRVLQVLQVGPLLSLPP----K----GRMZM2G098892 -ETIVCNTFQEVESVALARL----------------PVPAVAIGPLEAPKSVS-------GRMZM2G098890 -DTIVCNTFHAIESEVLALL----------------PTAALAVGPLEAPRSTS-------GRMZM2G328224 -ETIVCNSIQELEPGALALV----------------PD-VFPVGPLSSD-----------GRMZM2G031138 -EMVVSNSFYEAEAGAFKLF----------------PG-ILPIGPLSADGAFR-------GRMZM2G030821 -EVIVCNSFRDAEAAALELF----------------PS-ILPIGPLFADEELM-------GRMZM2G130256 -DVLLCNTVKELEEGILSQH----------------PS-IVPIGPLPTGLREG-------GRMZM2G363545 -DVVLCNTFEDLEPDIFGAHSPA---------A---AS-ILPIGPLRTCQRRT-------GRMZM2G128504 -DFILCNSFHDAEPATFARF----------------PR-IVPVGPLLTGERRRRGS----GRMZM2G046994 -DFVLCNSFHGAEPATFARF----------------PR-IVPVGPLLTGERRGSGS----GRMZM2G004858 -QCVLFTSFYELETGAIDGTSQV---------V---PCPIYAVGPSIPYMPLEGD-----GRMZM2G073376 -QSLLFTTMYELEASVIDSLRSV---------L---SCPVYPIGPCVPYMMLEDH-----GRMZM2G440902 -QCIVFTTFQELESDAIGAMR-----------Q---NCPVYAVGPCVPFMALQEH-----GRMZM2G173315 -DYVLCNTVEELEPSTIAALRAD--------------RPFYAVGPIFPA-----------GRMZM2G337048 -DYVLCNTVEELEPSTIAALRAY--------------RPFYAVGPILPA-----------GRMZM5G834303 -RALIVNTTTSLERSSLGHLTQE---------M----RDVFAVGPLHAMSP---------GRMZM2G083130 -KAVVLNTLYDMEKDVVDALAPH---------L----PPIYTVGPLASVVKASLPA----GRMZM2G476049 -SAVIFHTLEEMESQVMSALSAI---------L----PPAYAIGPLPLLLSGAGGG----GRMZM2G049798 -GALILNTFDGLEADVLAALRAE---------Y----PRVYTVGPLGLLLRQDDDR----GRMZM2G118657 -RGVILNTFEDLEHDVLAALRDE---------F----PRVYTIGPLAAAAA---------

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GRMZM2G169628 -RGVILNTYDALEQDVVDALRRE---------F----PRVYTVGPLAAFANAAA------GRMZM2G470524 -QGIIVNTFDALEQDVVGALRGV---------F----PRVYTIGPLLTFARDMV------GRMZM2G089241 -DAIMINTFDDLEGSTLDAVRAT---------L----PPVYTVGPLLLHTRRAVTV----GRMZM2G373124 -SAVVINTFDDLDATLLHAMAKL---------L---SRPIYTVGPLLLTVRNNVPA----GRMZM2G083935 -SAVVINTFDELDATLLAAMAKL---------L----PPIYTVGPLQLTVRNNVQA----GRMZM2G041699 -SAVILNTFDELEGEAVAAMRSL---------G--LARKVYTLGPLPLLAREDPPT----GRMZM2G132706 -SAVIVNSFDELERPALDAMRAT---------I----PAVYTIGPLASVTEQVVPR----GRMZM2G009125 -DAVILNTFDELEQEALDAMRA----------MIPSSASIHTIGPLAFLAEEIVPR----GRMZM5G870067 -DAVLLNTLDELEQEALDAMRAA---------VIPPAASINTIGPLALLAEQIVPR----

GRMZM2G426242 GARGG----------E--TAVA-----------AASLGAWLDP----FPE--G-SVVYVSGRMZM5G854655 DSRAN----------S---------------DDARLCMAWLDA----KRA--D-SVLYVSGRMZM2G179063 MTDDG----------G---------------GGDRRVLEWLDT----KET--K-SVVYVSGRMZM2G035755 PRLVS----------N---------------DDARRCMAWLDA----KAP--K-SVVYVSGRMZM5G888620 ATRGA----------NNGLS-----------RDAGACQQWLDA----KPE--G-SVVYVSGRMZM2G113653 GRGGD----------S-STA-----------AEAARVLRWLNT----KPA--R-SVVYVCGRMZM2G178209 AARGN----------K--ASMD-----------EAQCLQWLDS----MDP--G-SVIFVSGRMZM2G325014 SATSG----------S--DDAT-----------AVRCGSWLEQ----KKP--R-SAVLVSGRMZM2G325023 AATA--------------EDAN-----------AVRCVSWLDS----KKP--R-TVVFVSGRMZM2G067361 --RG-----------N-TAAIG-----------ADECLRWLDG----KEA--D-SVVYVNGRMZM2G148277 ASRGL----------R-ASVID-----------PDECHQWLDG----KEP--G-SVVYVCGRMZM2G403740 --RG-----------R-ATDVD-----------VDACLRWLDG----QEP--G-SVVYVSGRMZM2G008935 SSRGA----------D--GGVGVR------VQQHSAVAAWLDS----KDT--G-SVVFVSGRMZM2G151332 SSRGA----------D--GG-----------QQHSAVAAWLDS----KET--G-SVVFVSGRMZM2G479038 AARGN----------R--ADVD-----------VGLVLSWLDA----RPA--A-SVLYVSGRMZM2G338465 ASRGN----------R--PDVD-----------AGLFVSWLDA----RPP--S-SVLYISGRMZM2G458776 AGRGN----------R--AAMD-----------AEHIVSWLDA----RPA--A-SVLYINGRMZM2G056335 AERGD----------R--AAVD-----------AEQVVSWLDA----RPA--A-SVLYVSGRMZM2G007012 AGRGN----------R--AAVD-----------ADQIVSWLDA----RPA--A-SVLYISGRMZM2G389944 AGRGN----------R--AAVD-----------ADRIVSWLDA----RPA--A-SVLYISGRMZM2G067424 ASGGT----------E-----------------RDPILQWLDG----RDE--G-SVVYVCGRMZM2G074395 HRGGS----------G-----------------NADCLSWLST----KPS--R-SVVFVCGRMZM2G037545 AGGGA----------Y-----------------GSRCIDWLDK----KPP--Q-SVVYLCGRMZM2G082037 AAAGV----------T-----------------EPPCIRWLHS----KPS--C-SVVYVCGRMZM2G042865 AAAGT----------S-----------------ESPCIRWLDS----RPS--C-SVVYVCGRMZM2G051474 --------------------------------TDHECMSWLDG----QPR--G-SVAYVSGRMZM2G372068 GADV------------------------DGTPPRAACLEWLDR----QPA--R-SVVYVSGRMZM2G085854 KDD-----------------------------APCPCVEWLDR----QPA--K-SVIFVSGRMZM2G426415 DGA-----------------------------SSSPCLEWLDR----QPP--R-SVVFVSGRMZM2G156026 --------------------------------VSSPCIEWLDL----QPT--G-SVVYVSGRMZM2G007795 --------------------------------DESGCLEWLDR----QPE--N-SVVYLSGRMZM2G455075 --DA------------------------RSSSSAQECIRWLDA----QPP--A-SVVFLCGRMZM2G039129 ----------------------------------------------------G-SVVFFCGRMZM2G113794 -------------------------------QQAQECVRWLDS----QPP--S-SVVFLCGRMZM2G095261 -------------------------------SPSHECVAWLDA----QPP--G-SVAFLCGRMZM2G063550 GDGE------------------------QVVAQRHECVRWLDA----QPP--A-SVVLLCGRMZM2G415973 -------------------------------EQPHECLRWLDA----QPR--S-SVVLLCGRMZM2G395508 A------------------------------SGDEACVRWLDA----QPR--A-SVVFLCGRMZM2G324466 -------------------------------EPPHPCVRWLET----QPA--A-SVVLLCGRMZM2G131928 -------------------------------EPPHPCVRWLET----QPA--A-SVVLLCGRMZM2G155911 T------------------------------EHPHECVRWLDT----QPA--A-SVVLLCGRMZM2G095807 -----------------------------EEHACDACLAWLDE----QPE--L-SVVFLCGRMZM2G096412 -----------------------------EAKEKHECLAWLDG----QPE--R-SVVLLCGRMZM2G060993 --GV------------------------GEAKEKHECLAWLDE----QPE--R-SVVFLCGRMZM2G449019 ---A------------------------RAGERHDECLRWLDA----QPE--R-SVVFLCGRMZM2G043295 AEQE------------------------RAAETRHECLAWLDE----QPE--N-SVVFLCGRMZM2G381025 --GD------------------------G--GPQHECLAWLDA----QPE--R-SVAFLCGRMZM2G122072 --GG------------------------EAAERPHECLAWLDA----QPE--R-SVVFLCGRMZM2G051683 -----------------------------LGKGGEECLAWLDA----QPR--A-SVVLLCGRMZM2G010987 -----------------------------LGKGGEECLAWLDA----QPR--A-SVVFLCGRMZM2G130119 -----------------------------GDGKHNECLTWLDA----RPA--R-SVVFLCGRMZM2G105991 -------------------------------GAGHECLRWLDA----QPD--R-SVVFLCGRMZM2G058314 -----------------------------EKGERHACLSWLDA----QPE--R-SVVFLCAC206788.3_FGP015 -----------------------------GGGGRHECLAWLDA----QPK--R-SVVFLCGRMZM2G036409 -----------------------------GNGERHACLAWMDG----QPR--Q-SVVFLCGRMZM2G111344 -----------------------------GASERHACLEWLDA----QPD--R-SVVFLSGRMZM2G163519 -TG-------------------GGT----TSPDPDRVTRWLDL----QPP--A-SVVLVSGRMZM2G174192 AGG-------------------GTS----SESESDRVMRWLDA----QTP--A-SVVLVCGRMZM2G061321 ------------------------------IAGHEATLRWLDR----QAQ--G-SVVYAAGRMZM2G135722 ------------------------------IGSHKAALQWLDG----QAP--R-SVVYAA

Page 22: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

GRMZM2G061289 ------------------------------IGGHKAALQWLDG----QPR--R-SVVYAAGRMZM2G180283 --T-------------------QR--------DDSAALSWLDE----QPS--K-SVVYVAGRMZM2G066067 --G-------------------ASA----NANGEHATVRWLDA----QPP--S-SVLYVAGRMZM2G022266 --R-------------------RE------EDGGSTARCWLDA----QPP--S-SVVYVAGRMZM2G162755 G----------------------------DKPGDALLDEWLGK----QRA--R-SVVYVAGRMZM2G383404 G----------------------------KEEGSGSPVAWLDE----QPA--R-SVVYVAGRMZM2G162783 ------------------------------AEETADYMRWLSA----QPP--R-SVVYVSGRMZM2G099740 E----------------------------AAQKQGNYRAWLDE----QPP--R-PVVYVSGRMZM2G154558 E----------------------------TKDTSSTIFAWLDK----QLP--G-SVLYVSGRMZM2G082249 S------------------------------RDDASIIRWLDT----HPP--R-SVLYISGRMZM2G159404 -------------------------------EAEAAVASFLDC----HPP--S-SVLYISGRMZM2G086925 K----------------------HG----ISKERHECLDWLDL----QPP--A-SVVYVSGRMZM2G075387 -----------------------------ASGTRHECLGWLDA----QPP--S-SVLYVSGRMZM2G120016 P----------------------TA----GQSARHECLDWLDK----QPP--A-SVLYVSGRMZM2G168474 T----------------------TP----PGQARHECLEWLDR----QPP--E-SVLYVSGRMZM2G110511 T----------------------AP--------RHECLEWLDR----QPP--E-SVLYVSGRMZM2G160523 GGQ--------------------------ATVELADLSAWLDA----FPE--G-SVVYVCGRMZM2G301148 GGE--------------------------PAVAAARVSAWLDA----FPD--G-SVVYVSAC234524.1_FGP005 -----------------------E-----EEEDPEGCLAWLDENEKAGQP--G-PVVYVSGRMZM2G416045 -----------------------EK----KEQDPEGCLSWLDE--RAAHP--G-SVVYVSGRMZM2G343426 -----------------------KK----KEQDPEGCLSWLDE--RAVHP--G-SVVYDSGRMZM2G091176 -----------------------EK----KEQDPEGCLSWLDE--RAAHP--G-SVVYISGRMZM2G175910 GTG-------------------SQQ----RHDAKPSWMQWLDD--MAAAG--K-PAVYVSGRMZM2G006565 -----------------------HH----GDVAKPAWMRWLDE--KAAAG--R-AVLYVAGRMZM2G306328 -----------------------HH----GDVAKPAWMRWLDE--KAAAG--R-AVLYVAGRMZM2G085054 --------------------VRGPAG-P----RGRGGAAVLGA----HLP--H-VPLH--GRMZM2G161335 --------------------SLHGVV-Q----ADRGCLQWLDT----QQP--G-SVLYVSGRMZM5G815665 -----------------Q-----SLH-A----PDRGCLAWLDD----HPP--R-SVLYVSGRMZM2G097030 -----------------AA-AAGYQD-A----PDPTCLAWLDA----RPP--R-SVLYVSGRMZM2G463996 --------------------TEDSLL-A----PDRACLEWLDK----QEA--D-SVLYVSGRMZM2G156127 --------------------ASSSLL-L----QDRGCLEWLDA----QAP--A-SVLYVSGRMZM5G892627 --------------------ASSSLL-R----QDRGCLDWLDA----RGP--A-SVLYVSGRMZM2G173926 -------------------GAGSSLL-A----PDHSCIEWLDA----QRP--G-SVLYVSGRMZM2G047910 -------------------GAGSSLL-A----PDHSCIEWLDA----QRP--G-SVLYVSGRMZM2G117878 -----------------DGADETSLL-S----QDRVCMEWLDA----RGP--G-SVLYVSGRMZM2G022242 ---------------------AAA---LADDGDRHGCLAWLAR----RDA--G-TVAYVSGRMZM2G165390 -----------------------D---TAAPADPHGCLAWLGR----QPA--R-GVAYVSGRMZM2G319965 RHQGE--------MNSASELAQIHLVPHD-DETKKAYMEWLDA----QPE--K-SVVYLSGRMZM5G832805 ---GS--------SGASNDEGRIHLYRHD-DADRKRYMEWLGA----QPE--S-SVVYVSGRMZM5G896260 ---------------PA-TDARIHLFDHDDDAGKKRYTEWLHA----HPD--G-SVVYASGRMZM2G106443 ---------------ASADDARIHLFEHDDDVDKKRYMDWLRA----RPD--S-SVVYASGRMZM2G475884 -----------------PCRPCVELFQPN---DATACMGWLDT----MPA--R-SVVFVSGRMZM2G344993 -------------------GGDAGIFKQD---DDAKYMEWLDA----KPA--N-SVVYVSGRMZM2G316030 -DDG-----------RRAPCPPRDVFDH----DKSGYLGWLDT----KPA--K-SVVYISGRMZM2G363554 -AAA---------------GGNNDLFTQ----DGKGYLEWLDA----QAP--G-SVVYISGRMZM2G457929 -AAGA--------GGAKNGGNNNDLFKQ----DGEGYLDWLDA----QAP--G-SVVYISGRMZM2G050748 -----------------DAPVRGDLIKA-----ADDCIGWLDA----QAP--R-SVVYASGRMZM2G304712 -------------RDDDEGAVRGDLMKA-----ADGCVEWLDA----QAP--R-SVVYASGRMZM2G417945 ---DG--------DGAGSGAVRGDLMKA-----ADDCVEWLDA----QAP--R-SMVYASGRMZM2G022101 ----G--------G-------------G-----DDGCMAWLDA----QPP--G-SVVYVAGRMZM2G055446 ---GG--------H-------------D-----DDDSVAWLDA----QPP--R-SVVFVAGRMZM2G073244 ---AD--------D-------------A-----DDECTAWLDA----QPP--R-SVVFVAGRMZM2G024131 ----A--------GANGRITYGANLVKPE-----DACTKWLDT----KPD--R-SVAYVSAC199541.4_FGP007 -------------RMPSNLASGVSFFSSS-----APTMGWLDR----QPP--C-SVVLASAC199541.4_FGP001 -------------RLPCDKTYGVDLFSST-DSEAAPCMTWLDK----QEP--C-SVVLASAC199541.4_FGP004 -------------RLPCDKTYGVDLFSST-DSEAAPCMTWLDK----QEP--C-SVVLASAC199541.4_FGP002 -------------RLPCDKTYGVDLFSST-DSEAAPCMTWLDK----QEP--C-SVVLASGRMZM2G334336 -------------RLPLNKAYGFNLFSSS-----DSCLPWLDK----QRP--R-SVVLVSGRMZM2G095280 -------------RFPLNKAYGFNLFSSS-----DSCLPWLDK----QRP--R-SVVLVSGRMZM2G035282 -------------RLPLNKTYGFNLFNSS-----ESCLAWLDK----QLP--C-SVVLVSGRMZM2G063042 -------------RFPLNKTYGFNLFNSS-----EPCLAWLDK----QLP--R-SVILVSGRMZM2G171548 -------------RLPSDTKYGLDLYEPT----AAPCIAWLDA----HPP--R-SVVYASGRMZM2G022212 -------------RLPDDTSYGFHLYTPM----TETTKAWLDA----RPA--R-SVVYASGRMZM2G078465 -------------RLPDDVSYGIHLHAPM----AAESKAWLDA----QQA--G-SVLYVSGRMZM2G110816 ---------------ADASKKTATMW-Q----PDKTCMDWLDK----QSP--G-SVIYVSGRMZM2G159918 AAENNGS--SCVPLEKPNAAAATTMW-Q----ADSTCMDWLDR----RSP--G-SVVYVSGRMZM2G021786 GIGERT----KQQQQCVNINKSPSMW-R----ADSTCIGWLDA----QRA--R-SVVYVSGRMZM2G432291 GFDDDGCITKGDDLSHDSTSKNPSMW-Q----ADETCVEWLDA----QRA--G-SVVYVSGRMZM2G098892 -----------------SAAAAGHFW-A----QDEACLRWLDA----QAP--G-SVVYVAGRMZM2G098890 ---------------------ASQLW-P----EDRACLVWLDA----QPP--G-SVVYVAGRMZM2G328224 -------------------KPVGCFW-A----EDASCPAWLDA----QPA--S-SVVYVA

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GRMZM2G031138 -------------------KPVGHYL-P----EDERCVKWLDA----HPD--ASSVVYVAGRMZM2G030821 -------------------RPVAQML-P----EDTGCLPWLDA----RAD--G-SVVYIAGRMZM2G130256 -------------------KPIGNFW-P----DDDSCLSWLDA----QPD--R-SVVYVAGRMZM2G363545 -----------------SEAPAGHFWRA----DDEACASFLDA----QPR--G-SVTYVAGRMZM2G128504 GGK-------------QAAAVVGHFWRP----EDGACMAWLNA----QAA--R-SVVYVAGRMZM2G046994 -----------------KTAVVGHFWRP----EDDACMSWLDA----QAA--M-SVVYVAGRMZM2G004858 ----------------------SGEF-H----HEEDYFGWLDA----QPR--S-SVLYVSGRMZM2G073376 -------------------TVSSGKV-A----RQGDYFTWLDS----QPV--N-SVLYVSGRMZM2G440902 -------------------KASP---------DGDDYMAWLDA----QPA--G-SVLYVSGRMZM2G173315 G--------------FARSAVATSMW-P----ESDDCSRWLGA----QPP--G-SVLYISGRMZM2G337048 G--------------FARSAVATSMW-A----ES-DCSRWLDA----QPV--G-SVLYISGRMZM5G834303 -----------------APAVASSLW-R----PDDGCMAWLDN----QQA-ER-AVVYISGRMZM2G083130 PPRGAGDDTSVPAAGSVRSSAMLGVL-Q----EDRECMAWLDD----GKA-AR-SVVYLSGRMZM2G476049 GDPA-----------IHVSGSSTSLS-K----ENRACLEWIDG----KRH--N-SVLFASGRMZM2G049798 DSSAS--------ASGSTESTGLSLW-K----QDAECLAWLDA----QER--G-SVVYVNGRMZM2G118657 --------------------GALSLW-E----EDSECVAWLDA----QAD--G-SVLYVSGRMZM2G169628 GGE--------------LDAIGGNLW-K----EDTSYLRWLDT----QRP--G-SVVYVNGRMZM2G470524 RPD--------------ASAICGNLW-K----EDPSCLGWLDA----QGP--G-SVVYVNGRMZM2G089241 GSE--------------LDGLGSNLW-K----EQDGLLEWLDG----QAT--G-SVVYVNGRMZM2G373124 DSP--------------VAAIGSNLW-K----EQEAPLRWLDG----RAP--R-SVVYINGRMZM2G083935 NSP--------------VAAIGSNLW-K----EQEAPLRWLNG----RAP--R-SVVYVNGRMZM2G041699 --P--------------RSAISLSLW-K----EEEECLRWLDG----RDP--G-SVVYVNGRMZM2G132706 G-P--------------LNAVSCSLW-Q----EDQSCLAWLDA----RKPQPW-SVVYVNGRMZM2G009125 GGP--------------TDALGSNLW-K----EDVSCFEWLHG----RAP--R-SVVYVNGRMZM5G870067 GSQ--------------LDSLGSNLW-K----EDASCFRWLDG----RKP--R-SVVFVN

GRMZM2G426242 FGSQA-V--LTPGVAA-------------------ALAEALERSAVPFVWVVGAGSSG--GRMZM5G854655 FGSAG-R--MPPAQLI-------------------QLGLALVSCPWPVLWVIKGADTLPDGRMZM2G179063 FGSAG-C--MPPAQVV-------------------QLGMALASCAWPVVWVLKGADSMPDGRMZM2G035755 FGSFG-R--MPPAQLM-------------------QLGMALVACRSPVLWLVKGADSLPDGRMZM5G888620 FGTLT-H--FSPPEMR-------------------ELARGLDLSGKNFVWVVGGAD---TGRMZM2G113653 FGSLT-R--FPREQVA-------------------ELGMGLADSGANFVWVVGDKDAP--GRMZM2G178209 FGSMA-R--TAPQQLV-------------------ELGLGLESSNRAFIWVIKAGDKF-PGRMZM2G325014 FGSLA-R--SSQPQLV-------------------EIAHGLEASNRPFIWVVKPAS-L-AGRMZM2G325023 FGSLV-R--SSLPQLV-------------------EIGHGLEATKRPFIWVVKPSN-L-AGRMZM2G067361 FGSIA-H--AQPKQVV-------------------ELGLGLEASGHPFVWVVKNAEQYGEGRMZM2G148277 FGSIS-Q--AEAKQVV-------------------ELGLGLEASGHPFIWAVKNAGEYDEGRMZM2G403740 FGSIA-Q--ADPRQAV-------------------ELGLGLEASRHPFVWVVKSVDEYDGGRMZM2G008935 FGSLA-R--KLPKQLF-------------------EVGHGLEDSGRPFLWVVKQAEASPPGRMZM2G151332 FGSLA-R--KLPKQLF-------------------EVGHGLEDSGRPFLWVVKLAEASPPGRMZM2G479038 FGSLA-Q--LSLKQTV-------------------ELARGLEASGRPFVWAIKEAKSS-AGRMZM2G338465 FGSLA-H--LPAKQVI-------------------ELGRGLEASERPFVWAIKEANSN-TGRMZM2G458776 FGSIA-R--LSATQVA-------------------ELAAGLEASHRPFIWSTKET-AG--GRMZM2G056335 FGSIA-R--LLPPQVA-------------------ELAVALEASRWPFVWSAKET-AG--GRMZM2G007012 FGSIG-R--LFPAQAA-------------------ELAAGLEASRLPFIWSAKETAPG--GRMZM2G389944 FGSIA-R--LFPAQVA-------------------ELAAGLEASRRPFIWSAKETAPA--GRMZM2G067424 FGSTC-S--LGETQLR-------------------ELATGLRASGRPFVWVVSTTPRG--GRMZM2G074395 FGSWA-E--FSATQTR-------------------ELALGLEASNQPFLWVVRSNDSS--GRMZM2G037545 FGSLT-H--VSEAQLR-------------------ELALGLEASEKPFLWVVRS-E----GRMZM2G082037 FGTYA-A--ISGEQLR-------------------ELALGLEASGKPFLWVVRAGD----GRMZM2G042865 FGTYA-A--ISEDQLR-------------------ELALGLEASGEPFLWVVRA-D----GRMZM2G051474 FGSGG-T--ITWQQTA-------------------ELALGLELSQCRFIWAIKRPHQSSTGRMZM2G372068 FGSGG-A--LPKEQMH-------------------ELALGLERSGQRFLWVVRSPSDDEGGRMZM2G085854 FGSGG-T--LPAEEMR-------------------ELALGLELSGQRFLWVVRSPSE-GGGRMZM2G426415 FGSGG-A--LPAEQMR-------------------ELALGLELSGQRFLWVVRSPSD-GGGRMZM2G156026 FGSAG-T--LSVEQTA-------------------ELAAGLENSGHRFLWIVRMSSLNGEGRMZM2G007795 FGTGG-S--LSVEQTA-------------------ELAAGLEMSGHRFLWVVRMPSLDGNGRMZM2G455075 FGSMG-W--MNAEQAR-------------------EVAAGLERSGHRFLWVLRGPPAG--GRMZM2G039129 FGGQG-C--FTAPQAH-------------------D----LDHSGHRFLWVLRGTPE---GRMZM2G113794 FGSGG-C--FTAPQAH-------------------EIAHGLDRSGHRFLWVLRGTPE---GRMZM2G095261 FGSMG-W--FDPPQVA-------------------EITAALERCGHRFLWVLRGPPSDA-GRMZM2G063550 FGSMGGS--FPSPQVR-------------------EIADGLERSGHRFLWVLRGPPPP--GRMZM2G415973 FGSMG-N--LSVPQVH-------------------EIAEGLQRSEYRFLWVLRGPPP---GRMZM2G395508 FGSLG-W--FDAAKAR-------------------EAAAGLERSGHRFLWALRGPPA---GRMZM2G324466 FGSRG-F--FGAAQAR-------------------EVARGLERSGHRFLWVLRGPPA---GRMZM2G131928 FGSRG-F--FGAAQAR-------------------EVARGLERSGHRFLWVLRGPPA---GRMZM2G155911 FGSQG-F--SAAPQAH-------------------EIAHGLERSGHRFLWVLRGPPA---GRMZM2G095807 FGSVG-SSNHSETQLK-------------------EIAVGLERSGQRFLWVVRAPLGD--GRMZM2G096412 FGSIG-AATHSEEQLR-------------------EVAVGLQRSGHRFLWVVRAPLRG--GRMZM2G060993 FGSLG-AAAHSEEQLK-------------------EIAVGLERSGHRFLWVVRAPLPTEG

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GRMZM2G449019 FGSMG-A--FSQEQLK-------------------EIATGLDKSGHRFLWVVRRPASSI-GRMZM2G043295 FGSRC-A--HSAEQLR-------------------GIAVGLERSGQRFLWSVRTPAGT--GRMZM2G381025 WGSKG-A--LPKEQLK-------------------ETAVGLERCGQRFLWVVRTPAGR--GRMZM2G122072 WGSRG-L--LSEEQLK-------------------EIAAGLEKSGQRFLWVVRTPASS--GRMZM2G051683 FGSIG-R--FSAEQIR-------------------EVAAGLEASRQRFLWVVRAPPS---GRMZM2G010987 FGSIG-R--FSVEQIR-------------------EVAAGLEASGQRFLWVVRAPPS---GRMZM2G130119 FGSAS-S--LPAEQLR-------------------EIALGLERSGHAFLWAVRAPVAPD-GRMZM2G105991 FGSLG-T--FPKRQLE-------------------EIAVGLERSGQRFLWVVRSPP----GRMZM2G058314 FGSLG-A--VSAAQVK-------------------EIARGLESSGHRFLWVVRSPP----AC206788.3_FGP015 FGSKG-S--FPAAQLQ-------------------EIAHGLESSGHRFLWAVRSPP----GRMZM2G036409 FGSLG-A--FSAAQLK-------------------ETARGLERSGHRFLWAVRSPS----GRMZM2G111344 FGSLG-R--FSMPQLR-------------------EIARGLENSGQRFLWVVRSPP----GRMZM2G163519 FGSEY-F--MSEQQLA-------------------RMARGLELSGERFVWVVRFPKG-DEGRMZM2G174192 FGSEY-F--MSEQQLA-------------------RMARGLELSGERFVWVVRFPRETEEGRMZM2G061321 FGSEA-K--LTSAQLQ-------------------TIALGLEASGLPFLWAFRPPADAAPGRMZM2G135722 FGSEA-K--LTSAQLQ-------------------AIALGLEASGLPFLWAFRQPTDAN-GRMZM2G061289 FGSEA-K--LTSAQLQ-------------------AIALGLEASGLPFLWAFRQPVDAN-GRMZM2G180283 FGSEY-P--MTVKQLH-------------------EIARGLELAGTRFLWALKRPSVAHPGRMZM2G066067 LGSEV-P--LRAEQVH-------------------ELALGLELAGTGFLWALRNPSGVP-GRMZM2G022266 LGSEV-P--LTVALVH-------------------ELALGLELAGARFLWALRKPSGVADGRMZM2G162755 FGNRS-A--ARLDQIR-------------------EIAAGLEDSGYPFLWVLKTTKVDREGRMZM2G383404 FGNRC-A--VSHDQIR-------------------EIAAGLEASNCRFLWVLKTTTVDRDGRMZM2G162783 FGSRK-A--IPRDQLR-------------------ELAAGLEASGKRFLWVVKSTIVDRDGRMZM2G099740 FGSRK-A--LPKDQIK-------------------ELAAGLEACGHRFLWVVKGAVVDRDGRMZM2G154558 FGSQF-N--INATQMV-------------------ELAIGLEQSAHKFVWVIRPPSGFDDGRMZM2G082249 FGSQN-S--ISADQMM-------------------ELALGLEASGRPFLWALRPPLGFDAGRMZM2G159404 FGSQN-S--IRAEHMA-------------------ELALALESTGRPFVWAVRPPDGHDVGRMZM2G086925 LGSTS-S--LRDEQVE-------------------ELASALRDSKQRFIWVLRDADRANIGRMZM2G075387 FGTTS-S--LRPEQVR-------------------ELAAALRDSGARFVWALRDADRAGMGRMZM2G120016 FGTTS-S--LRAEQIA-------------------ELAAALRDSKQRFVWVLRDADRGVVGRMZM2G168474 FGTTS-C--LHADQVA-------------------ELAAALKGSKQRFVWVLRDADRADIGRMZM2G110511 FGTTS-C--LHADQVA-------------------ELAAALKGSKQRFVWVLRDADRADIGRMZM2G160523 FGSQA-V--LSPAVAA-------------------ALAEALERSAVPFMWAVG-DAVVP-GRMZM2G301148 FGTQA-A--LSAAQAA-------------------SVADALARSSAAFVWAARAGTAVP-AC234524.1_FGP005 FGTQT-H--FSDAQLD-------------------EIAHGLVQSGHPFLWVVRSDTWSPQGRMZM2G416045 FGTQA-H--ITYAQLD-------------------ELVHGLVQSGHPFLWVVRFDTWSPSGRMZM2G343426 FETQA-H--ITDAQLD-------------------ELVHGLVQSSHPFLWAVRSDTWSLPGRMZM2G091176 FGTQA-H--ITDVQLD-------------------ELVHGLVQSGHPFLWAVRSDTWSPPGRMZM2G175910 LGTLA-S--ISQAQLK-------------------EVSDGLDSAGVNFLWAVRRPDNADDGRMZM2G006565 LGTTL-A--VESAQLR-------------------EVADGLDRAGLDFIWAVRPVD--ADGRMZM2G306328 LGTTL-A--VESAQLR-------------------EVADGLDRAGLDFIWAVRPVD--ADGRMZM2G085054 RGRHA-G--RDPGRHVGAGVRRGAAQQAGAGGHGQPARRGAGGPGLPALAGRAAGALRAVGRMZM2G161335 FGSMA-A--MDPHEFV-------------------ELAWGLADSKRPFVWVVRPNLIRGFGRMZM5G815665 LGSVA-C--VDRGAFV-------------------EMAWGLARSGVSFLWVVRPGLVGG-GRMZM2G097030 MGSVA-R--VDRAVFE-------------------ETAWALAGSGVPFLWVLRRGSVRGAGRMZM2G463996 FGSLA-R--VDGKELL-------------------EIAWGLADSKMPFLWVLRHGLLDKVGRMZM2G156127 FGSLA-S--MSAAELV-------------------ETAWGIANSGYTFLWVLRPGLVRGSGRMZM5G892627 FGSLA-S--MSAADLV-------------------ETAWGIANSGRPFLWVLRPGLVRGAGRMZM2G173926 FGSLA-A--MDSSELR-------------------EVAWGLAECGHPFLWVVRPNMVRGCGRMZM2G047910 FGSLA-A--MDSSELR-------------------EVAWGLAECGHPFLWVVRPNMVRGCGRMZM2G117878 FGSVV-H--VTADELV-------------------EIAWGLANSGVPFLLVVRRGLVVGVGRMZM2G022242 FGTVA-A--LPPDELR-------------------ELASGLEDSGAPFLWSLREDAWA--GRMZM2G165390 FGTVA-C--PRPDELR-------------------ELAAGLEASAAPFLWSLREDSWT--GRMZM2G319965 FGSLL-G--YTKRQAE-------------------EVLHGLQASGRPYLWVVRKEGRA--GRMZM5G832805 FGSIA-T--HTLQQME-------------------EVVQGLLQAGRPYLLAARSWHGL--GRMZM5G896260 FGSVT-K--LAKRQMQ-------------------EIAGGLRQCGRPYLLVVRRDGVD--GRMZM2G106443 FGSVT-K--VTRHQMG-------------------EVAAGLRQCGRPYLLVVRRDGLQ--GRMZM2G475884 FGSIL-S--LSKRQDE-------------------ELRRGLEATGRAYLLVARKGNNG--GRMZM2G344993 FGSLT-T--VAREHLE-------------------ELLRGLEESGRPYLCVIRKDNKA--GRMZM2G316030 FGSSS-V--MCKDQVA-------------------EITDAMVQVKRPFLLVLRKDSRK--GRMZM2G363554 FGSLS-V--MRRRQIE-------------------EVARGMSESGRPFLWVLREDNRR--GRMZM2G457929 FGSLS-V--MSKRQIE-------------------EVARGMAESGRPFLWVLREDNRS--GRMZM2G050748 VGSIV-T--LSTEVIA-------------------EMAYGLASTGRPFLWVVRPDTRP--GRMZM2G304712 VGSVV-R--LNAEEVG-------------------EMAHGLASTGRPFLWVVRPDTRP--GRMZM2G417945 VGSVV-R--LNAEEVG-------------------EMAHGLASTGRPFLWVVRPDTRP--GRMZM2G022101 FGSLV-T--VGCGEML-------------------ALAEGLAATGRPFLWVVRDDSRR--GRMZM2G055446 FGSLL-Q--ISRDEMS-------------------ELAAGLAATGRPFLLVVRDDNRE--GRMZM2G073244 FGSLV-K--LDRDEMA-------------------ELAGGLASTRRPCLWVVRDDSRD--GRMZM2G024131 FGSLA-S--LGNAQKE-------------------ELARGLLAAGKPFLWVVRASDEH--AC199541.4_FGP007 YGTVY-S--LDADQLG-------------------ELGNGLCDSGWPFIWVVRPDEAQ--AC199541.4_FGP001 YGTVA-N--LNKEQLD-------------------ELGNGLCDSGKPFVWVLRSNEAE--

Page 25: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

AC199541.4_FGP004 YGTVA-N--LDKEQLD-------------------ELGNGLCDSGKPFVWVLRSNEAE--AC199541.4_FGP002 YGTVA-N--LDKEQLD-------------------ELGNGLCDSGKPFVWVLRSNEAE--GRMZM2G334336 YGTVS-D--YDETQLE-------------------ELGNGLYSSGKPFIWVVRSNEEH--GRMZM2G095280 YGTVS-D--YDENQLE-------------------ELGNGLYSSGKPFIWVVRSNEEH--GRMZM2G035282 YGTVS-D--YDETQLE-------------------ELGNGLYNSGKPFIWVVRSNEEH--GRMZM2G063042 YGTVS-N--YDEAQLE-------------------ELGNGLYNSGKPFIWVVRSNEEH--GRMZM2G171548 FGSLS-D--LDPLQMR-------------------EVAHGLLDAGRPFLWVVRASEAH--GRMZM2G022212 LGSIA-K--PDAAQTA-------------------EMAEGLYGSGKAFLWVVRASESA--GRMZM2G078465 FGSMA-S--LSPEQMG-------------------EIAEGLYGSGKPFLWVVRATEAA--GRMZM2G110816 FGSWAAP--IQPDRIR-------------------GFARGLEASGRPFLWVLKSHPSWR-GRMZM2G159918 FGSWVAP--IGPERMA-------------------EFALGLQAAGRPFLWVLKNHPSWR-GRMZM2G021786 FGSWVGS--IGPGKVR-------------------ELALGLEATGRPFLWALKRDPSWR-GRMZM2G432291 FGSWVSS--IGRDAIN-------------------ELALGLAATGRPFLWALKDEPSWR-GRMZM2G098892 FGSLT-V--FDAERLQ-------------------ELADGLALTGRPFLWVVRPNFADGVGRMZM2G098890 FGSFT-V--FDTARLQ-------------------ELADGLALTGRPFLWVVRPNFANGVGRMZM2G328224 FGSLA-A--YGAAQLV-------------------ELAEGLLLTSRPFLWVVRPGSTGEQGRMZM2G031138 FGSIT-I--FSARQFE-------------------ELAEGLELTGRPFLWVVRPDFTPGLGRMZM2G030821 FGSFA-I--VNPRQFE-------------------ELALGLERTGRPFLWVVRPGFTAGNGRMZM2G130256 FGSIA-V--LNQEQFH-------------------ELARGLELSRRPFLWVVRPGLA---GRMZM2G363545 FGSLT-V--MSPAQLQ-------------------ELALALLASARPFLWVFRPGLA---GRMZM2G128504 FGSHT-M--FDARQFR-------------------ELALGLELSGRPFLWVVRPDIVLGGGRMZM2G046994 FGSFT-M--FDTRQFR-------------------ELALGLELSGRPFLWVVRPDIVLG-GRMZM2G004858 FGTHV-S--MPSSQLE-------------------EVALGLHESTVRFFWVARDRASTATGRMZM2G073376 LGSFV-S--VSASQLE-------------------EIALGLIASEVRFLWILREQS--PRGRMZM2G440902 LGSFL-S--VSAAQFD-------------------EIAAGLAGSKARFLWVLRDADACSRGRMZM2G173315 FGSYA-H--VTKQELR-------------------EIAGGVLASGARFLWVMRPDIVSSDGRMZM2G337048 FGSYA-H--VTKQELR-------------------EIAGGVLASGARFLWVMRPDIVSSDGRMZM5G834303 LGSLA-V--ISHEQFT-------------------EFLHGLVATGYPFLWVLRPDMLVASGRMZM2G083130 FGSHA-S--MGDARLK-------------------EIASGLARCGSPYLWVLRPEMAAAVGRMZM2G476049 FGSLA-K--LAHEQLV-------------------ELAWGLANSGYEFLWVIRSDQQGLVGRMZM2G049798 FGSHT-V--VTPEQLN-------------------EFAWGLAASGHRFLWSMRDNLVRGGGRMZM2G118657 FGSLA-V--LSLEQVA-------------------ELAWGLAASDRPFLWAVRPGLVAGDGRMZM2G169628 FGSIT-V--MTAAQLA-------------------EFAWGLAGCGRPFLWVIRPDLVSGEGRMZM2G470524 FGSIT-V--MTPAQLA-------------------EFAWGLANCGRPFLWVIRPDLVTGEGRMZM2G089241 YGSIT-V--MSNEQLL-------------------EFAWGLAGSGYPFMWNIRPDLVKGDGRMZM2G373124 FGSVT-V--MSNEQLV-------------------EFAWGLANTGYTFLWNVRPDLVKGGGRMZM2G083935 FGSIT-V--MSNEQLV-------------------EFAWGLANTGYYFLWNVRPDLVKSGGRMZM2G041699 FGSIT-V--MTSEQLV-------------------EFAWGLANSGRPFLWIIRRDLVRGDGRMZM2G132706 FGSVT-V--MSGQELA-------------------EFAWGLASSGHDFLWVVRPDVVKGDGRMZM2G009125 YGSIT-V--MTNEELV-------------------EFAWGLANSGHDFLWIIRPDLVNGDGRMZM5G870067 YGSVT-V--MTSAELV-------------------EFAWGLANSGHDFLWIIRPDLVSGD .

GRMZM2G426242 ---------------------------VVPKGF----------EVR--------AASAGRGRMZM5G854655 DV----------------------NEWLQ-RNT----------DGS--------GLPESQGRMZM2G179063 DV----------------------KEWLR-ESL----------D-------------DKQGRMZM2G035755 DV----------------------KDWLR-ENT----------DAD--------GVAGSKGRMZM5G888620 EE----------------------SEWMP-DGF----------AEL--------VARGDRGRMZM2G113653 ----------------------------QLPDI----------DGA----------APGRGRMZM2G178209 EV----------------------EGWLA-DGF----------EER----------VKDRGRMZM2G325014 EF----------------------ERWLSDDGF----------ERR----------VGDRGRMZM2G325023 EF----------------------ERWLSEDGF----------ESR----------VGETGRMZM2G067361 EV----------------------GEFL--HDL----------EAR----------VASRGRMZM2G148277 TV----------------------REFL--RDL----------EAR----------VAGRGRMZM2G403740 TV----------------------RAFL--DDL----------EAR----------VAGRGRMZM2G008935 EV----------------------REWL--GAL----------EAR----------AAGRGRMZM2G151332 EV----------------------REWL--GAL----------EAR----------AAGRGRMZM2G479038 DV----------------------RAWLLAERF----------EER----------VRDRGRMZM2G338465 DV----------------------QAWL-AEGF----------EER----------VRDRGRMZM2G458776 ----------------------------LDAEF----------EAR----------VKDYGRMZM2G056335 ----------------------------LDAGF----------EER----------VKGRGRMZM2G007012 ----------------------------LDAEF----------EER----------VKDRGRMZM2G389944 ----------------------------LDAEF----------EER----------VKDRGRMZM2G067424 -D----------------------GGCAE---R----------EAR----------ASSNGRMZM2G074395 -D----------------------DQW-APEGW----------EQR----------VANRGRMZM2G037545 -------------------------TWAPPEGW----------EER----------VGDRGRMZM2G082037 -------------------------GWAPPDGW----------AER----------VGERGRMZM2G042865 -------------------------GWTPPEGW----------EQR----------VGERGRMZM2G051474 IAAFF---------GTQRGDEHSPLDFL-PEGF----------MER--------TR--GMGRMZM2G372068 TL--------NGN-YYDAESKKDPFAYL-PEGF----------VGR--------TK--EVGRMZM2G085854 VG--------NDN-YYDSASKKDPFSYL-PQGF----------LER--------TK--DV

Page 26: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

GRMZM2G426415 AV--------NDN-YYDAESKRDPFAYL-PEGF----------VDR--------TCAAGVGRMZM2G156026 HSDDM-----GRN-YCDGGDENDPLAWL-PEGF----------LER--------TR--GRGRMZM2G007795 PCAY----------GSMPGDKDDPLAWL-PEGF----------LER--------TS--GRGRMZM2G455075 ----------SG---SGHPTDANLGDLL-PDGF----------LER--------TK--AQGRMZM2G039129 ----------PG---TKMPSDGNLAELL-STDF----------LAR--------TK--DRGRMZM2G113794 ----------PG---TKLPSDGNLAELL-PADF----------LAR--------TK--DRGRMZM2G095261 ----------SG---SEHPTDANLDELL-PEGF----------LER--------TG--GKGRMZM2G063550 ----------DG---SKYPTDANVHELL-PEGF----------LER--------TK--GRGRMZM2G415973 ----------AG---SPYPTDANVDELV-PGGF----------LER--------TK--ERGRMZM2G395508 ----------AG---SRHPSDADLDELL-PAGF----------LER--------TR--GRGRMZM2G324466 ----------PG---TWSPVDADLAELL-PEGF----------VER--------TR--GRGRMZM2G131928 ----------PG---TWSPVDADLAELL-PEGF----------VER--------TR--GRGRMZM2G155911 ----------PG---ERHPSDANLSELL-PDGF----------LER--------TK--GRGRMZM2G095807 -N--------PER-EFGDKADPDLQALL-PEGF----------LER--------TR--GRGRMZM2G096412 -D--------TER-LFDPRADTDLDALL-PDGF----------LEA--------TR--DRGRMZM2G060993 VD--------PGR-LFDPRADFDLCALL-PAGF----------LER--------TR--ARGRMZM2G449019 FD--------PKR-FLGRQPKLDLDAVL-PEGF----------LER--------TR--GRGRMZM2G043295 DG--------GS---------ENLGALF-PEGF----------LQR--------TK--DRGRMZM2G381025 DG--------PGR-YWEQRAEADLDALL-PEGF----------VER--------TK--DRGRMZM2G122072 DD--------PKR-FWLPRPEPDLDALL-PEGF----------LER--------TK--DRGRMZM2G051683 DD--------PAK-KFEKPPEPDLDALL-PEGF----------LAR--------TK--DRGRMZM2G010987 DD--------PAK-KFERPPEPDLDALL-PEGF----------LAR--------TK--DRGRMZM2G130119 AD--------STK-RFEGRGDAALEALL-PDGF----------LDR--------TR--GRGRMZM2G105991 GG--------P--------PADDVRALL-PAGF----------AER--------TE--GRGRMZM2G058314 ED--------PTK-FFLARPEPDLDSLL-PEGF----------LER--------TS--DRAC206788.3_FGP015 EE-----------------PDTDLGKLL-PEGF----------LDR--------NR--DRGRMZM2G036409 ED--------QDS------GEPDLEALL-PDGF----------LER--------TR--GRGRMZM2G111344 EH--------RSN-S--VEPDLDLEPLL-PEGF----------LER--------TR--ERGRMZM2G163519 G--------------------DAAARAL-PRGF----------AP---------AP--GRGRMZM2G174192 G--------------------DEAARAL-PRGF----------AP---------AP--GRGRMZM2G061321 G--------------------QG-TGGL-PEGF----------EER--------VN--DRGRMZM2G135722 ---------------------EG-KSGL-PEGF----------EER--------IN--GRGRMZM2G061289 ---------------------EG-ESGL-PEGF----------EER--------ID--GRGRMZM2G180283 ----------------------D-EDLL-PPGF----------EER--------TR--GRGRMZM2G066067 ----------------------D-ADVL-PAGF----------QER--------TR--GRGRMZM2G022266 ----------------------D-ADVL-PPGF----------RER--------TC--GRGRMZM2G162755 D-------------------DAELAEVL-GDGY----------LER--------VK--GRGRMZM2G383404 D-------------------SAVLTELL-GEEF----------LER--------VQ--GRGRMZM2G162783 D-------------------TADLGGLL-GDGF----------LER--------VQ--GRGRMZM2G099740 D-------------------AGELSELL-GEAF----------LRR--------VQ--GRGRMZM2G154558 NRE------------------CW-SEWL-PDGF----------SER--------LVVTGQGRMZM2G082249 KDV------------------FR-PEWL-PAGF----------EER--------TARANVGRMZM2G159404 KGE------------------FRADQWL-PDGF----------EER--------ARTSNRGRMZM2G086925 FAD---------------HGESPRHAKF-LPEF----------AEH--------TQ--DRGRMZM2G075387 RGG---------------EGGAEA-LRA-AAAS----------ELG--------PD--GAGRMZM2G120016 HEE---------------EAVESRHARF-LSEF----------TEE--------TQ--GIGRMZM2G168474 YAE----------------SGESRHAMF-LSEF----------TRE--------TE--GTGRMZM2G110511 YAE----------------SGDSRHAKF-LSEF----------TRE--------TE--GTGRMZM2G160523 --D----------------------------GF----------EAR--------AAASGRGRMZM2G301148 --E----------------------------GF----------EAR--------TA--PRAC234524.1_FGP005 A--------------------------------------------D--------VA--PHGRMZM2G416045 V--------------------------------------------D--------VG--PNGRMZM2G343426 V--------------------------------------------D--------MG--PNGRMZM2G091176 V--------------------------------------------D--------VG--PNGRMZM2G175910 LGT----------------------------GY----------EDR--------VV--GRGRMZM2G006565 LGA----------------------------GF----------EER--------VR--GRGRMZM2G306328 LGA----------------------------GF----------EER--------VR--GRGRMZM2G085054 RELREHGGHGPARVRGAGVGAGRRRPPL-RVGGPAQPHPRLRVGRA--------AR--RRGRMZM2G161335 ES-----------------------GAL-PDGV----------EDE--------VR--GRGRMZM5G815665 VP---------------------EVPPL-PDGF----------SEE--------VR--NRGRMZM2G097030 DE---------------------EVPPV-PEEL----------RET--------VR--HRGRMZM2G463996 RR-----------------------LLL-PGGF----------EEA--------TR--GRGRMZM2G156127 QTS-------------------EAAPPL-PDGF----------DAA--------TR--GRGRMZM5G892627 PPS--------------------QPPPL-PDGF----------HAE--------TR--GRGRMZM2G173926 DVD--------------------SARQL-PDGF----------EDA--------VK--GRGRMZM2G047910 DVD--------------------SARQL-PDGF----------EDA--------VK--GRGRMZM2G117878 DK-----------------------QEL-PDGF----------MAA--------VE--GRGRMZM2G022242 --------------------------LL-PPEF----------LER-----AKAAA--DSGRMZM2G165390 --------------------------LL-PPGF----------LDR-----AAG-T--GSGRMZM2G319965 --------------------------EE-VDLW----------LTE--VEEEKKDI--SKGRMZM5G832805 --------------------------ED-DGAR----------R--VLDNAAQSSG--GR

Page 27: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

GRMZM5G896260 --------------------------DD-EGGI----------H-----GLENDTE--MQGRMZM2G106443 --------------------------DD-DDES----------SSSLHVPLGSESC--QQGRMZM2G475884 --------------------------GS-D------------------------GS--GKGRMZM2G344993 --------------------------AL-AD-------------AE---TKVDEEL--KNGRMZM2G316030 --------------------------GH-DDD------------AV---AAADADS--AGGRMZM2G363554 --------------------------SE-GADA----------DAA---TLA--GG--GRGRMZM2G457929 --------------------------SE-GAGA----------GAA---PLADWEG--ERGRMZM2G050748 --------------------------LL-PEGF----------LDA------A-VA--GRGRMZM2G304712 --------------------------LL-PDGF----------LDS--------VA--GRGRMZM2G417945 --------------------------LL-PEGF----------LDS--------VA--GRGRMZM2G022101 --------------------------LL-PDGA----------LAA------C--G--GRGRMZM2G055446 --------------------------LL-PDDC----------LAA------AAGS--NRGRMZM2G073244 --------------------------LL-PDTA----------VAS------GDSW--GRGRMZM2G024131 --------------------------QV-PRYL----------LAE------ATAT--GAAC199541.4_FGP007 --------------------------KL-PQDL----------EDA------CREK--EKAC199541.4_FGP001 --------------------------KL-SRQL----------GGR------CK----ERAC199541.4_FGP004 --------------------------KL-SRQL----------GGR------CK----ERAC199541.4_FGP002 --------------------------KL-SRQL----------GGR------CK----ERGRMZM2G334336 --------------------------KL-SDEL----------RDK------CK----ERGRMZM2G095280 --------------------------KL-SDEL----------RDK------CK----ERGRMZM2G035282 --------------------------KL-SDEL----------RDK------CK----ERGRMZM2G063042 --------------------------KL-SDEL----------RDK------CK----ERGRMZM2G171548 --------------------------KL-PAGF----------EGA------C-G---GRGRMZM2G022212 --------------------------KL-PENF----------AGR------TTE---ERGRMZM2G078465 --------------------------KV-PKGF----------ADR------AQA---TRGRMZM2G110816 -------------------------AGL-PDGY----------AEK-----V---S--GRGRMZM2G159918 -------------------------AGL-PDRF----------VET-----VASSR--GIGRMZM2G021786 -------------------------AGL-PDGF----------AGR-----V---A--GRGRMZM2G432291 -------------------------EGL-PSQY----------AEA-----V---A--GRGRMZM2G098892 -----------------------G-ERW-LDGF----------RRR-----V--GE--GRGRMZM2G098890 -----------------------D-QGW-LDKF----------RCR-----V--GD---TGRMZM2G328224 ---------------------------H-LEQL----------RRR-----A--A---PRGRMZM2G031138 -----------------------S-KAW-LHEF----------QRR-----V--A---GRGRMZM2G030821 ELS--------------------K-QAW-FDEF----------QCR-----V--A---GRGRMZM2G130256 -N---------------------T-ANY-PDGF----------LET-----V-E----KRGRMZM2G363545 -------------------------AEL-PPAF----------TDL-----L-PRH--ARGRMZM2G128504 GG---------------------I-HGY-PDGF----------LDR-----V-SAT--GRGRMZM2G046994 GD---------------------V-HDY-PDGF----------LDR-----V-RAT--GRGRMZM2G004858 ---------------------------L--EQI--------------------SAG--GKGRMZM2G073376 ---------------------------V-QELF--------------------SGI--NNGRMZM2G440902 ---------------------------V-RGLI--------------------RDP--DAGRMZM2G173315 DPR-----------------------PL-PEGF----------AEA-----A-AAA--GRGRMZM2G337048 DPD-----------------------PL-PEGF----------AEA--------AA--GRGRMZM5G834303 QDA-----------------------AL-REAI----------GAV--------GK--DRGRMZM2G083130 E-----------------------------------------------------VG--ENGRMZM2G476049 DGG----------------------AVL-PPEF----------LAE--------TE--GRGRMZM2G049798 GGA--------------------GLDAM-PSTF----------KAE--------TA--GRGRMZM2G118657 RGA----------------------DAL-PEGF----------LAA--------TG--GRGRMZM2G169628 T------------------------AML-PEGF----------VTD--------TK--GRGRMZM2G470524 K------------------------AML-PEEF----------YAE--------TR--ERGRMZM2G089241 T------------------------AVL-PPEF----------LSS--------VK--DRGRMZM2G373124 DSA--------------------G-AGL-PPEF----------LAA--------TE--GRGRMZM2G083935 DSA-----------------------GL-PPEF----------SAA--------TE--GRGRMZM2G041699 T------------------------AVL-PPEF----------LSE--------TA--GRGRMZM2G132706 TSS--------------------A-AAL-PPGF----------LEA--------TK--GRGRMZM2G009125 A------------------------AVL-PPEF----------LEA--------IR--GRGRMZM5G870067 A------------------------AVL-PPEF----------QEA--------IE--GR

GRMZM2G426242 GVVV--------------R-GWAPQLATLRHPAVGWFMTHCGWNSVLESAAA-GVAMLTWGRMZM5G854655 CLAL--------------R-GWAPQVAILEHPAVGGFLTHCGWGSTLESVAA-GVPMATWGRMZM2G179063 CLLV--------------R-GWAPQVAILAHRAVGGFLTHCGWGSTLEAIAA-GMPMATWGRMZM2G035755 CLVV--------------R-GWAPQVAILAHPAIGGFVTHCGWGSIMEAVAA-GVPMATWGRMZM5G888620 GFII--------------R-GWAPQMLILTHPAVGGFVTHCGWNSTLEAVSA-GVPMVTWGRMZM2G113653 GLVV--------------R-GWAPQVAVLRHAAVGAFVTHCGWGGVTEAAAA-GVPVLAWGRMZM2G178209 GLII--------------R-GWAPQVMILWHRSVGGFMTHCGWNSTLEGVCA-GVPMITWGRMZM2G325014 GLVV--------------T-GWAPQKAILSHPATGAFVTHCGWNSVLECVAA-GLPMTTWGRMZM2G325023 GLVI--------------R-DWAPQKAILSHPATGAFVTHCGWNSVLECVAA-GLPMVSCGRMZM2G067361 GLLI--------------R-GWAPQVLILSHAATGSFVTHCGWNSTMEAITA-GLPVVTWGRMZM2G148277 GLLL--------------R-GWAPQLLILSHDAVGGFVTHCGWNSTLEAITA-GLPVVTWGRMZM2G403740 GLLV--------------R-GWAPQVLILSHAAVGGFVTHCGWNSTIEAVTA-GLPVVTW

Page 28: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

GRMZM2G008935 GLVV--------------R-GWAPQLAILSHRAVGGFVTHCGWNSLLESVAH-GIPVVTWGRMZM2G151332 GLVV--------------R-GWAPQLAILSHRAVGGFVTHCGWNSLLESVAH-GVPVVTWGRMZM2G479038 GLLV--------------R-GWAPQVTILSHPAVGGFLSHCGWNASLEAITH-GVPVLTWGRMZM2G338465 GLLV--------------R-GWAPQVTILSHPAVGGFLTHCGWNAALEAIAY-GVPVLTWGRMZM2G458776 GLVI--------------R-GWAPQMTILSHTAVGGFLTHCGWNSTLEAISN-GVPLLTWGRMZM2G056335 GLVV--------------R-GWAPQMAILSHPAVGGFLTNAGWNSILESLCY-GVPMLTWGRMZM2G007012 GLVV--------------H-GWAPQMTILSHPAVGGFLTHCGWNSILESLCY-GVPLMTWGRMZM2G389944 GLVV--------------R-GWAPQMTILSHPAAGGFLTHCGWNSILESLCY-GVPLMTWGRMZM2G067424 GMVV--------------AGRWAPQAEILAHRAVGGFVTHCGWNSVLEAVSA-GVPLATWGRMZM2G074395 GLVV--------------H-GWAPQLAVLAHPSVGAFVTHCGWNSVLEAASA-GVPVLTWGRMZM2G037545 GMVV--------------T-GWAPQTAILAHHAVGAFVTHCGWNSVLETVVA-GVPVLTWGRMZM2G082037 GMLV--------------R-GWAPQTAVLAHPAVGAFLTHCGSSSLLEAAAA-GVPMLTWGRMZM2G042865 GMLV--------------R-GWAPQTAVLAHPAVGAFLTHCGSSSLLEAAAA-GVPMLTWGRMZM2G051474 GLVA--------------Q-SWAPQTAILGHPSIGCFVTHCGWNSVLESVIN-GVPMVAWGRMZM2G372068 GLLV--------------P-SWAPQTQVLAHGATGGFLTHCGWNSTLESLVH-GVPMVAWGRMZM2G085854 GLVV--------------P-SWAPQPKVLAHQSTGGFLTHCGWNSTLESLVH-GVPMLAWGRMZM2G426415 GLVV--------------P-SWAPQTQVLAHAATGAFLTHCGWNSVLESLVY-GVPMVAWGRMZM2G156026 GLAV--------------S-SWAPQVRVLSHPATAAFVSHCGWNSTLESISS-GVPMVAWGRMZM2G007795 GLAV--------------V-AWAPQVRVLSHSATACFVSHCGWNSTLESVAA-GVPMVAWGRMZM2G455075 GVVW--------------P-GWAPQLEILAHAAVGGFVTHCGWNSVLESLWH-GVPMAPWGRMZM2G039129 GLVW--------------P-TKAPQKEILAHAAVGGFVTQCGWNSVLESLWH-CMPMVPWGRMZM2G113794 GLVW--------------P-TKAPQKEILAHAAVGGFVTHCGWNSVLESLWH-GVPMVPWGRMZM2G095261 GLVW--------------P-TWAPQKEILAHPAVGGFVTHGGWNSVLESLWH-GVPMAPWGRMZM2G063550 GLVW--------------P-TWAPQKDILANPAVGGFVTHCGWNSILESLWH-GVPMVPWGRMZM2G415973 GLVW--------------P-RWAPQKEILSHPSIGGFVSHGGWNSTLESLWH-GVPLVAWGRMZM2G395508 GLVW--------------P-RWAPQKAVLAHPAVGGFVTHCGWNSTMESLWH-GVPLAPWGRMZM2G324466 GLVW--------------P-AAVPQKEVLAHAAVGGFVTHCGWNSVLESLWF-GVPMVPWGRMZM2G131928 GLVW--------------P-AAVPQKEVLAHAAVGGFVTHCGWNSVLESLWF-GVPMVPWGRMZM2G155911 GLVW--------------P-TKAPQKEILAHAAVGGFVTHGGWNSVLESLWF-GVPMAPWGRMZM2G095807 GLVV--------------K-LWAPQVAVLQHKATGAFVTHCGWNSVLEGVMA-GVPMLCWGRMZM2G096412 GLVV--------------K-HWAPQVEVLNHRATGAFVTHCGWNSVLEGITA-GVPMLCWGRMZM2G060993 GLVV--------------K-LWAPQVNVLNHRATGAFVTHCGWNSVMEAVTA-GVPMLCWGRMZM2G449019 GLVV--------------R-SWAPQGEVLQHPATSSFVTHCGWNSVLEGVMA-GVPMLCWGRMZM2G043295 GLVV--------------R-SWAPQVEVLRHPSTGAFMTHCGWNSTLEAITA-GVPMLCWGRMZM2G381025 GLVV--------------T-SWAPQVDVLNHPATGVFVTHCGWNSTLEAIAA-GVPMLCWGRMZM2G122072 GLVI--------------K-SWAPQVDVLSNPAVGAFVTHCGWNSSLEAITA-GVPMLCWGRMZM2G051683 GLVV--------------K-SWAPQRDVLAHASVGGFVTHCGWNSVLEAIMA-GVPMVAWGRMZM2G010987 GLVV--------------R-SWAPQRDVLAHASVGGFVTHCGWNSVLEAVMA-GVPMVAWGRMZM2G130119 GLVV--------------P-TWAPQVEVLRQPAIAAFVTHCGWNSTLEAVTA-GVPMVCWGRMZM2G105991 GLVV--------------A-SWAPQVDVLRHRAAGAFVTHCGWNSTLEGVVA-GLPLLCWGRMZM2G058314 GMVV--------------K-MWAPQVEVLRHAATGAFMTHCGWNSVLEAASA-GVPMLCWAC206788.3_FGP015 GMVV--------------K-DWVPQAEVVRHEAVRAFVTHCGWNSTLEAIMS-GLPMICWGRMZM2G036409 GLVL--------------K-NWAPQTQVLRHEAVGAFVTHCGWNSVLEAAMS-GVPMICWGRMZM2G111344 GFAV--------------K-NWAPQSEVLRHLSIGAFVTHCGWNSALEGIAS-GVPMICWGRMZM2G163519 GLVV--------------E-GWAPQRRVLEHPACGAFLSHCGWSSVLESLAA-GVPIVALGRMZM2G174192 GLVV--------------E-GWAPQRRILAHPACGAFLSHCGWSSVLESLAA-GVPIVALGRMZM2G061321 GLVC--------------R-GWVPQPRLLAHESVGGFLTHAGWNSIAEGLSR-GVTMVLLGRMZM2G135722 GLVC--------------R-GWVPQARFLAHESVGGFLTHAGWNSIIEGLAR-GVRLVLLGRMZM2G061289 GLVC--------------R-GWVPQTRFLAHESVGGFLTHAGWNSIIEGLAR-GVRLVLLGRMZM2G180283 GSVV--------------T-GWVPQTSILGHGAVAAFMMHCGWGSTIEALQY-GHPLVMMGRMZM2G066067 GLVT--------------T-GWVPQPSVLAHAAVGGFLTHCGRNSLIEGLLY-GRPLVMLGRMZM2G022266 GLVA--------------M-GWVPQMSILAHGAVGGFLTHCGRNSLVEGLLF-GHPLVMLGRMZM2G162755 GIVT--------------K-GWVEQEELLKHPAVGMFVSHGGWNSALEASSA-GVPLLVWGRMZM2G383404 GLVT--------------K-AWVDQEALLKHPAMGLFLSHSGWNSVTEAAAA-SVPLLAWGRMZM2G162783 AFVT--------------M-GWVEQEEILQHGSVGLFISHCGWNSLTEAAAF-GVPVLAWGRMZM2G099740 GLVT--------------K-SWVEQEEVLRHPAVALFVSHCGWNSVTEAVSS-GVPVLAWGRMZM2G154558 GLVV--------------P-CWAPQVEILAHAANGAFLTHCGWNSVQESLAH-GVPLIGWGRMZM2G082249 GLLA--------------R-GWAPQMRILSHPSTGAFLSHCGWNSVLESLSR-GVPLIGWGRMZM2G159404 GLLV--------------R-GWAPQVRILAHASTGAFLSHCGWNSVLESVTH-GVPIIGWGRMZM2G086925 GLVI--------------T-GWAPQLEILAHGATAAFLSHCGWNSIMESMGH-GKPILAWGRMZM2G075387 GVVV--------------T-GWAPQLEILAHGATAAFMSHCGWNSTVESLSH-GKPILAWGRMZM2G120016 GLVI--------------T-GWAPQLEILAHGATAAFMSHCGWNSTMESLSH-GKPMLAWGRMZM2G168474 GLVI--------------T-GWAPQLEILAHGATAAFMSHCGWNSTIESLSH-GKPVLAWGRMZM2G110511 GLVV--------------T-GWAPQLEILAHGATAAFMSHCGWNSIIESLSH-GKPVLAWGRMZM2G160523 GSVV--------------R-GWAPQVALLRHPAVGWFVTHCGWNSTLEAVAA-GVPMLAWGRMZM2G301148 GLVI--------------R-GWAPQVEVLRHRAVGWFLTHCGWNSVLEAAAA-GVAMLAWAC234524.1_FGP005 GKIV--------------R-RWVPQRSVLAHKAVGGFVSHCGWNSVMESLAA-GKPILAWGRMZM2G416045 NRII--------------R-GWFPQRSILAHKAVGGFVNHCGWNFVMESLAA-VKPMLAWGRMZM2G343426 NRIV--------------R-GWVPQRSILAHKAVGGFVSHCGWNSVMESLVA-GKPMLAWGRMZM2G091176 NRIV--------------R-GWVPQRSILAHKAVGGFVSHCGWNSVMESLAA-GKPMLAWGRMZM2G175910 GKVV--------------R-EWVDQRRVLRHPSIRGFLSHCGWNSVLESVAA-GVPLVAW

Page 29: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

GRMZM2G006565 GEVV--------------R-GWVDQRAILAHECVKGFLSHCGWNSVLESISA-GVPLAVWGRMZM2G306328 GEVV--------------R-GWVDQRAILAHECVKGFLSHCGWNSVLESISA-GVPLAVWGRMZM2G085054 GGPGARPRRRRQLGAAGGG-ARAPGRGRLLHPLRLEL--HRGG--RVGGRAH-DLPPAPRGRMZM2G161335 GIVV----------------AWAPQEEVLAHPAVGGFLTHNGWNSTVEAISE-GVPMVCCGRMZM5G815665 GKIV----------------SWAPQREVLAHAATAAFWTHCGWNSTLESVCE-GVPMLVQGRMZM2G097030 GKIV----------------AWAPQREVLAHPAVGGFWTHCGWKSMVEAISE-GVPMLVQGRMZM2G463996 GVVV----------------PWVPQQEVLRHRAVGGFWTHSGWNSTLESVCE-GVPMMCRGRMZM2G156127 GMVV----------------SWAPQEEVLAHPAVGAFWTHCGWNSTLESLCA-GVPVIARGRMZM5G892627 GTVV----------------SWAPQEEVLAHPAVGAFWTHCGWNSTLEGVCA-GVPMLCRGRMZM2G173926 GVVV----------------RWAPQQEVLAHRAVGGFWSHCGWNSTLEAVSE-GVPMICRGRMZM2G047910 GVVV----------------RWAPQQEVLAHRAVGGFWSHCGWNSTLEAVSE-GVPMICRGRMZM2G117878 GKVI----------------EWAPQQEVLAHPAVGGFWTHNGWNSTLESIYE-GVPMLSRGRMZM2G022242 RLIV----------------PWAPQAAVLRHPAVGAFVTHSGWGSVVEGMAG-GVPMACRGRMZM2G165390 GLVV----------------PWAPQVAVLRHPSVGAFVTHAGWASVLEGVSS-GVPMACRGRMZM2G319965 GMVV----------------AWCDQQRVLAHPSVGCFVTHCGWNSTLEAVVC-GVPMVAVGRMZM5G832805 GTVV----------------DWCDQPEVLAHPAVGCFVSHCGWNSTLEAVAA-GVPLVGVGRMZM5G896260 GMVV----------------DWCDQLEVLSHPAVGCFVSHCGWNSATEAMAS-GVPIVGVGRMZM2G106443 GMVV----------------GWCDQLEVLSHPAVGCFVSHCGWNSTIEAMASGGVPIVGVGRMZM2G475884 GMVV----------------EWCNQTKVLSHGAVGCFVTHCRWDSTLESITG-GVPMVAVGRMZM2G344993 GIVV----------------EWCDQVRVLSHAAVGCFVTHCGWNSVLESLAA-GVPMVCVGRMZM2G316030 GMVV----------------EWCDQARVLSHPAVACFVTHCGWNSTLESAAC-GVPTVAVGRMZM2G363554 GMVV----------------GWCDQVRVLSHPAVGCFVTHCGWNSTLESTAC-GVPVVCVGRMZM2G457929 GMVV----------------GWCDQVRVLSHPAVGCFVTHCGWNSTLESMAC-GVPVVCVGRMZM2G050748 GMVV----------------PWSPQDRVLAHASTACFLTHCGWNSTLETVAA-GVPVLAFGRMZM2G304712 GAVV----------------PWSPQDRVLAHPSTACFLTHCGWNSTLETIAA-GVPVVAFGRMZM2G417945 GTVV----------------PWSPQDRVLAHPSIACFLTHCGWNSTLETIAA-GVPVVAFGRMZM2G022101 GRVV----------------AWCPQGRVLRHGAVGCFVTHCGWNSVAEALAA-GVPMVGYGRMZM2G055446 GKVV----------------AWCEQARVLAHGAVGCFVTHCGWNSTVEALAS-GVPVVTYGRMZM2G073244 GKLV----------------SWCDQRRVLSHSAVGCFITHCGWNSTTEALAA-GVPVVAYGRMZM2G024131 AMVV----------------PWCPQLDVLAHPAVGCFVTHCGWNSTLEALSF-GVPMVAMAC199541.4_FGP007 GLIV----------------QWCPQLEVLSHKATGCFITHCGWNSTVEAIVA-GVPMVGMAC199541.4_FGP001 GLIV----------------PFCPQLEVLAHKATGCFLTHCGWNSTIESIAS-GVPMVAMAC199541.4_FGP004 GLIV----------------PFCPQLEVLAHKATGCFLTHCGWNSTIESIAS-GVPMVAMAC199541.4_FGP002 GLIV----------------PFCPQLEVLAHKATGCFLTHCGWNSTIESIAS-GVPMVAMGRMZM2G334336 GLVV----------------SWCPQLEVLAHKATGCFYTHCGWNSTLEAIVN-GVPMVAVGRMZM2G095280 GLVV----------------SWCPQLEVLAHKATGCFFTHCGWNSTLEAIVN-GVPMVAVGRMZM2G035282 GLIV----------------SWCPQLEVLAHKATGCFFTHCGWNSTLEAIVN-GVPMVAIGRMZM2G063042 GLIV----------------SWCPQLEVLAHKATGCFFTHCGWNSTLEAIVN-GVPMVAIGRMZM2G171548 GLVV----------------SWCPQLEVLAHRAVGCFLTHCGWNSTAEALVT-GVPMVAVGRMZM2G022212 GLVV----------------TWSPQLEVLAHPAVGCFVTHCGWNSTMEALGA-GVPMVAMGRMZM2G078465 GLLV----------------SWCPQLEVLAHPAVGCFFTHCGWNSTVEALSA-GVPMVAMGRMZM2G110816 GKIV----------------SWAPQEDVLKHEALGCYVTHCGWNSVLEAVRQ-GVRMICYGRMZM2G159918 GKIV----------------PWAPQEEVLGHHAVGCYITHCGWNSTLEAVRH-RVRMICYGRMZM2G021786 GKLV----------------DWAPQQDVLRHAAVGCYLTHCGWNSTLEAIQH-GVRLLCYGRMZM2G432291 GKIV----------------AWSPQEDVLRHKAVGCYLTHCGWNSTLEAIQN-GVRLLCYGRMZM2G098892 GLVV----------------GWAPQQRVLAHPSVACFVTHCGWNSTMEGVRH-GVPFLCWGRMZM2G098890 GLVV----------------GWAPQQRVLSHPAVACFISHCGWNSTMEGVRH-GVPFLCWGRMZM2G328224 GRVV----------------SWCPQQNVLAHHAVACFLTHCGWNSTMEAVRN-GVPLLCWGRMZM2G031138 GMIV----------------SWCSQQQVLAHRAVACFVSHCGWNSTMEGLRN-GVPFLCWGRMZM2G030821 GMVV----------------SWCPQQKVLAHRAVACFVSHCGWNSTMEGVRN-GARFLCWGRMZM2G130256 GKIV----------------TWSPQHRVLAHPAVACFVSHCGWNSLMEGVRN-GLPFLTWGRMZM2G363545 GKVV----------------EWAPQEKVLAHPAVGCFLTHCGWNSTLEGVRH-GVPLLCWGRMZM2G128504 GMVV----------------AWSPQQRVLAHPAVACFVSHCGWNSTMEGVRN-GVPFLAWGRMZM2G046994 GMVV----------------AWSPQQRVLSHPSVACFVSHCGWNSTMEGVRN-GVPFLAWGRMZM2G004858 GLVV----------------PWCDQLKVLCHPSVGGFLSHCGWNSTLEAVFA-GVPMLAFGRMZM2G073376 GMIL----------------PWCEQLEVLCHHSVGGFMTHCGMNSTLEGVFA-GVPMLALGRMZM2G440902 GLIV----------------PWTNQLRVLCHPSVGGFFTHCGMNSTLEAVYA-GVPMLTLGRMZM2G173315 GLVV----------------QWCCQVEVLSHPAVAAFLTHCGWNSVLESVWA-GVPMLCFGRMZM2G337048 GLVV----------------QWCCQVEVLSHAAVGAFLTHCGWNSVLESVWA-GVPMLCFGRMZM5G834303 ACVV----------------PWVPQRDVLRHRAVGCFLTHSGWNSTIEGIVE-GVPMVCWGRMZM2G083130 GLVV----------------PWCAQEAVLSHPAVGLFVTHCGWNSILESVVA-GVPVLGCGRMZM2G476049 GCVT----------------SWCPQEAVLRHDAVGAFLTHCGWNSMLQSVCA-GVPMLCWGRMZM2G049798 CHVT----------------AWCPQEQVLRHPAVGCFLTHSGWNSTCESLAA-GVPMVCWGRMZM2G118657 CFIA----------------EWCAQEQVLRHRAVGGFLTHSGWNSTAESIWA-GVPMVCWGRMZM2G169628 GILA----------------SWCPQELVLSHPSVGLFLTHCGWNSTLESVCA-GVPMLCWGRMZM2G470524 GLFL----------------SWCPQEQVLSHPSTGLFLTHSGWNSTLESIRA-GVPMICWGRMZM2G089241 AMLT----------------TWCPQEAVLAHDAVGLFLTHSGWNSTLESICA-GVPMLSWGRMZM2G373124 SMLS----------------TWCPQAEVLEHEAVGLFLTHSGWNSTIESICG-GVPMVCWGRMZM2G083935 SMLS----------------TWCPQAAVLEHDAVGVFLTHSGWNSTLESICG-GVPMLCWGRMZM2G041699 GLMA----------------TWCPQQAVLDHPAVAAFLTHSGWNSTLEAMCG-GVPVISWGRMZM2G132706 GLVA----------------SWCDQEAVLRHEAVGLFLTHSGWNSTQESLSS-GVPMLSW

Page 30: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

GRMZM2G009125 GHLA----------------SWCPQEVVLRHEAVGVFLTHCGWNSTMESLCG-GVPMLCWGRMZM5G870067 GLLA----------------NWCAQDAVLRHQAVGVFLTHSGWNSTLESLCA-GVPMLCW : . .

GRMZM2G426242 -PM-TADQFVNARLLVDE-ARVAVPACAGGFGVA-------------------PDPGELAGRMZM5G854655 -PF-SAEQFLNEKLIVHV-LGIGLSVGVTKPTESVLTGAKDG----GGKADADVGMEQVKGRMZM2G179063 -PL-FAEQFINERLVVDL-LGVGVSVGVTKPTENILTASKL-----GADVEAEVGMEQVAGRMZM2G035755 -PF-FAEQFINEQLIVHV-LGVGVSVGVTKPTENVLNATTDAAGGSQGEADAEVGMEQVKGRMZM5G888620 -PR-YADQFYNEKLVVEL-LKVGVAVGSTDYASMLET------------RRAVIGGEVIAGRMZM2G113653 -PV-FAEQFYNEALVVGL-AGTGVSMGAERGYVWGGEA----------LGGVVVGRAAVAGRMZM2G178209 -PH-FAEQFVNERLVVDV-LKTGVEVGVKGVTQWGHEQ-----------EEVTVTKDDVEGRMZM2G325014 -PH-FGDQFMNEKLVVDV-LRVGVPVGVKDATQWGVET-----------EGVVATREDVEGRMZM2G325023 -PH-FAEQFMNEKLVVDV-LRVGVPVGVKGAAQWGVEA-----------EGVLATRQDVEGRMZM2G067361 -PH-FSDQFLNAKFAVEV-LGIGVDVGVTEPLMYQLEQ-----------KEIVVARDVVEGRMZM2G148277 -PH-FVDQFLNEKMAVEV-LGIGVSVGVKEPLTYQITK-----------KEILVGRDVVEGRMZM2G403740 -PH-FTDQFLNQKMAVEV-LGIGVSVGITEPLMYRKVE-----------KEIVVSRNVVEGRMZM2G008935 -SH-FADQFLNERLAVDV-LGVGVPIGVTAPVMVFDD------------ESVVVARGDVAGRMZM2G151332 -PH-FADQFLNERLAVDV-LGVGVPIGVTAPVMVFDD------------ESVVVARGDVAGRMZM2G479038 -PN-FADQFCSERLLVDV-LGVGVRSGVKLPPMSLPDE----------AEGVQVTSADVEGRMZM2G338465 -PS-FSDQFSSERLLVDV-LNIGVRSGVKVPAMFLPKE----------AEGVQVSSADVEGRMZM2G458776 -PH-FADQFLNEALIVDV-LGVGVRADVKVPASHVMLLNA----GKRERLLVQVGRDDLEGRMZM2G056335 -PH-FVDQFLNEALVVDV-LGVGVRSGAKVPATHEMHV----------TIEVQVGRVDIEGRMZM2G007012 -PL-FVDQFLNEALVVDV-LGAGVRSGAKVPVTHVTVVKP----GE--VLEVQVWRDGVEGRMZM2G389944 -PQ-FVDQFLNEALIVDV-LGTGVRSGAKVPATHVTVVKP----GE--VLEVQVWRDGVDGRMZM2G067424 -PL-RAEQFLNELFLVEV-LRVGVRVRE-------------------SDLEAVVPADAVVGRMZM2G074395 -PL-VFEQFINERLATEV-AAFGVRLWDG--GRRS----------ERAEDAEIVPAEAIAGRMZM2G037545 -PM-VFEQFIAERFVTQV-LAIGERLWPAGAGVRS----------TRSEEHELVPAGAVAGRMZM2G082037 -PL-VFDQFIEERLVTDV-LGIGERVWS---GARS----------TRYEEREVVPAEAVAGRMZM2G042865 -PL-VFDQFIEERLVTDV-LGIGERVWS---GARS----------TRYEERELVPAEAVAGRMZM2G051474 -PL-YAEQNMNAAMMEVQ-VGVALRAKV---GA-----------------DRFIRKDEVAGRMZM2G372068 -PL-FAEQRLNAVMLSEG-AGAAIRLPE---TK--------------------DK-ESIAGRMZM2G085854 -PL-FADQRQNAVLLCDG-VGAALRVPG---AK--------------------GR-EDIAGRMZM2G426415 -PL-YAEQRQNAVLLSDG-VGAALRVPE---SS--------------------KRREIIAGRMZM2G156026 -PL-FAEQRVNAVDLSEK-VGVALRLGV---RP---D-------------DGLVGREEIAGRMZM2G007795 -PL-YAEQKMNAAILTEV-TGVALRPAA---RG--NG-------------HGLVTREEIAGRMZM2G455075 -PL-YAEQPLNAFELVAC-MGVAVDLRV---VGTGRA-------------SSVVEAAELEGRMZM2G039129 -PL-AVEQHYIAFTLVAD-MGIAVALNV---ER--KR-------------KNFVEATELEGRMZM2G113794 -PL-GAEQHYNAFTLVAD-MGVAVALNV---ER--KR-------------KNFVEATELEGRMZM2G095261 -PL-YAEQHLNAFQLVAD-MGVAVPLKV---DR--KR-------------GNFVVAAELEGRMZM2G063550 -PQ-FAEQHLNAFELVAV-MGVAVAMQV---DR--KR-------------GNFVEAAELEGRMZM2G415973 -PL-YAEQHMNAFMLVAS-LGVAVAMEV---DR--KR-------------GNFVEAAELEGRMZM2G395508 -PL-YAEQHLNAFELVAV-VGVAVAMEV---DR--RR-------------DNFVEAAELEGRMZM2G324466 -PL-YAEQHLNAFTLVAA-MGVAVAMDV---DR--RR-------------GNFVEAAELEGRMZM2G131928 -PL-YAEQHLNAFTLVAA-MGVAVAMDV---DR--RR-------------GNFVEAAELEGRMZM2G155911 -PL-YAEQHLNAFTLVAY-VGVAVAMKV---DR--KR-------------NNFVEASELEGRMZM2G095807 -PL-YAEQKMNKVLMVEE-LRIGVELAG---WH--Q--------------HGLVKAEELEGRMZM2G096412 -PM-YAEQKMNKLFMVEE-AMVGVEMVG---WQ--Q---------------GLVSAEEVEGRMZM2G060993 -PM-YAEQKMNSVVMVEE-AGIGVDLVG---WQ--Q---------------GLVNAEEVEGRMZM2G449019 -PL-YAEQRMNKVFMTGD-MGVAVEMEG---YQ--T---------------GFVKAEAIEGRMZM2G043295 -PF-YAEQLMNKVFVTEG-MGVGVEMEG---YT--T---------------GFIKSEEVEGRMZM2G381025 -PLAGAEQRMNKVFITED-MGVGMEMEG---YM--T---------------GLIKAEEIEGRMZM2G122072 -PQ-GAEQKINKVLMTEA-MGIGLELEG---YN--T---------------GFIKAEEIEGRMZM2G051683 -PL-YAEQRLNRVFLEKE-MQLAVAVAG---YD--SD-------------KGLVPAEEVAGRMZM2G010987 -PL-YAEQRLNRVFLEKE-MQLAVAVEG---YD--SD-------------EGIVAAEEVAGRMZM2G130119 -PM-YAEQRLNKVFVAEG-MKLGVVMEG---YD-----------------EAMVKAEEVEGRMZM2G105991 -PL-YAEQRMNKVRIVEE-MKLGVEVRR---DG-----------------EGLVTAQEVEGRMZM2G058314 -PM-YAEQRVNKVFVVDE-IKAGVVMDG---YD-----------------EELVSAAEVEAC206788.3_FGP015 -PL-YAEQGLNKVFMVEE-WRIGVELRG---YE------------------KFVKAEELEGRMZM2G036409 -PL-YAEQRLNKVHVVEE-MKVGVVMEG---YD-----------------EELVTADEVEGRMZM2G111344 -PL-YAEQKMNKVHMVEE-LKVGVVMEG---YE-----------------EELVKAEEVEGRMZM2G163519 -PL-HIDQPLDANLAAEL--GAAVRVPQ----E--R--------------FGEFRAEDVAGRMZM2G174192 -PL-HIDQPLDANLATEL--GAAVRVQQ----E--R--------------FGEFRAEDVAGRMZM2G061321 -PL-MFDQGLNARLLVDK--KIGIEVER---DE--D--------------DGTFAPKDIAGRMZM2G135722 -PL-MFDQGLNARHLTEK--KISVEVPR---DE--E--------------DGSFAPKDIAGRMZM2G061289 -PL-VFDQGLNARHLTEK--KISVEVPR---DD--E--------------DGSFAPKDIAGRMZM2G180283 -PV-LVDHLSTARVMEQR--KVGVKVRK---EK--S--------------DEAFLGDNIAGRMZM2G066067 -PI-FGDQGPNARLMEGK--KVGLQVPR---DE--H--------------DGSFDRHGVAGRMZM2G022266 -PV-VGDQGPNARAMERT--KVGLQVAR---NG--K--------------DGSFDRHGVAGRMZM2G162755 -PQ-LGDHRVNAMAAVRAGIGAWAEHWS---WD--GE-------------DTLVTRQEIAGRMZM2G383404 -PR-GGDHRVNAMVTVSGGVGMWMEHWS---WD--GE-------------DWLVTGVEIAGRMZM2G162783 -PR-FGDQRVNAALVARSGLGAWEEGWT---WD--GE-------------EGLTTRKEVA

Page 31: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

GRMZM2G099740 -PR-FADQRVNASVVVRCGLGVWAEQWS---WE--GE-------------EALVRAEEIAGRMZM2G154558 -PL-SAEQFYNAKMLVEE-MGVCVEVAR---GS--D----------------GVRRERITGRMZM2G082249 -PL-GAEQFFNANL-AVE-WGVCVELAR---GN--LE-------------SSAVESRAVVGRMZM2G159404 -PL-AGEQFYNAKMLKEE-WGVCVEVAR---GN--ME-------------DTMVNRAAVAGRMZM2G086925 -PM-HSDQPWDAELVCKH-HKAGILIRP---ME--KQ-------------REVISAAAIQGRMZM2G075387 -PM-HSDQPWDAELVCKY-LRAGVLVRP---WE--RR-------------HDVTPAADIRGRMZM2G120016 -PM-HSDQPLVAELVCKC-LKAGLLVRP---WE--QH-------------SAVTPAETIRGRMZM2G168474 -PM-HSDQPWDSELLCKY-FKAGLLVRP---WE--KH-------------AEIVPAQAIQGRMZM2G110511 -PM-HSDQPWDSELLCNY-FKAGLLVRP---WE--KH-------------AEIIPAQAIQGRMZM2G160523 -PL-TGDQFFDARLLVDE-ARVAVRACK---GG----------------LGFVPDAGE--GRMZM2G301148 -PM-GADQFTDARLLAEA-G-VAVP-VA---EG----------------ADAVPDAGA--AC234524.1_FGP005 -PM-IAEQRLNARHVADI-VGAGIKVKV---LE--KPR-------GTAAVDVVVGRAEVEGRMZM2G416045 -PM-ITEQHLNARHVANI-LDAGVRIAL---KA----------------GVDVVRSVEVEGRMZM2G343426 -PM-IAEQHLNARHVANI-LGADVRIAL---KA----------------GADVIGSAEVEGRMZM2G091176 -PM-IAEQHLNARHVANI-LGAGVRIAL---KV----------------GADVVGSAEVEGRMZM2G175910 -PC-DFEQPMNAKFVVDE-LRIGVRVHT---SD--GA------------VGGLVKSEEIAGRMZM2G006565 -PM-GAEQPVNAKLVVDE-LGVGIRVPP---KS--DA------------VSGMARSEQIAGRMZM2G306328 -PM-GAEQPVNAKLVVDE-LGVGIRVPS---KS--NA------------VSGMARSEQIAGRMZM2G085054 GPV-RQREVRVPRL-EGG-HGGRRGPAGE-----------------------RGDQGRHRGRMZM2G161335 -PR-HGDQFGNMRYVCDV-WKVGTELVGE-----------------------QLERGQVKGRMZM5G815665 -PC-FADQMVNARYVTHE-WGVGLEVGEE------------------------IERGRVAGRMZM2G097030 -PC-FAEQIVNARYVTHQ-WGIGYEVGKP------------------------LERTAMAGRMZM2G463996 -PQ-FADQMINTRYVQEV-WRVGFELDGD-----------------------QLERRKIAGRMZM2G156127 -PC-FGDQMGNARYVDHV-WRTGLTLDGV------------------------LERGEVEGRMZM5G892627 -PC-FGDQMGNARYVDHV-WRTGLALHGE------------------------LERGKVEGRMZM2G173926 -PD-AVDQMMNTRYLQDV-WGVGFELQGE------------------------LERGKIKGRMZM2G047910 -PD-AVDQMMNTRYLQDV-WGVGFELQGE------------------------LERGKIKGRMZM2G117878 -PI-FGDQLPTARYVCDV-WRIGVLLEGV------------------------LERREVEGRMZM2G022242 -PF-FGDQLMNARAVARL-WCFGTAFD---------E-------------DKPMTRGGVAGRMZM2G165390 -PF-FGDQRMNARSVAHV-WGFGAAFE---------G---------------AMTSAGVAGRMZM2G319965 -PS-WSDQPVNAWLVEEE-WGVGVRAE-RD------G-------------EGVLTRGELAGRMZM5G832805 -PS-LFDQPTNTYLVVEE-WGVGVRGE-RD------G-------------EGVLAATELAGRMZM5G896260 -PN-MFDQPTNMYLVEEE-WGVGVRGE-RD------A-------------DGVLTGAELAGRMZM2G106443 -PD-SFDQPTNAYLVEEE-WGVGIRTG-RN------S-------------DGVLSGTELAGRMZM2G475884 -PR-WADQPTVAALVEAS-AGVGVRAR-VD------G-------------DGVVERRELQGRMZM2G344993 -PR-MSDQRTNAQLVVRE-WRVGVRAQ-VD------D-------------GGVLRAAEVRGRMZM2G316030 -PQ-YSDQGTAAWLVAER-MGTGVRAA-AR------A-------------DGVVEAQELRGRMZM2G363554 -PQ-WTDQGTNAWLV-ER-IGTGVRAAVSD------K-------------DGVLEAGELRGRMZM2G457929 -PQ-WTDQGTNAWLV-ER-IGTGVRAAVSD------K-------------DGVLEADELRGRMZM2G050748 -PQ-WGDQCTDAKFLVDE-LRMGVLLR-AP-----------------------LRREGVRGRMZM2G304712 -PQ-WGDQCTDAKFLVDE-LGMGVRLR-GP-----------------------LRRDAVRGRMZM2G417945 -PQ-WGDQCTDAKFLVEE-LRIGVRLR-GP-----------------------LRRDAVRGRMZM2G022101 -PW-WSDQFTNAKLLAEE-YGVGVRLP-AP-----------------------ATRDAVRGRMZM2G055446 -PA-WADQPTNAKFLADV-YGVGVRLP-KP-----------------------MARDALRGRMZM2G073244 -PV-FSDQRTNAAFLVDV-CGVAVRLP-TS-----------------------PTRDALRGRMZM2G024131 -AL-WTDQPTNARNVELA-WGAGVRAR-RD-----AG-------------AGVFLRGEVEAC199541.4_FGP007 -PR-SADQPTNARYVESA-WGIGLRMR-LD------Q-------------NGLLKREEVQAC199541.4_FGP001 -PQ-WADQPTTAKYVESA-WGIGVRMR-K----------------------GSLVRKEVEAC199541.4_FGP004 -PQ-WADQPTTAKYVESA-WGIGVRMR-K----------------------GSLVRKEVEAC199541.4_FGP002 -PQ-WADQPTTAKYVESA-WGIGVRMR-K----------------------GSLVRKEVEGRMZM2G334336 -PH-WADQPTISKYMESV-WALGVKVR-KD------E-------------NGLVTRDEVEGRMZM2G095280 -PH-WADQPTISKYMESV-WGLGVKVR-KD------E-------------KGLVTRDEVAGRMZM2G035282 -PH-WADQPTISKYMESM-WGLGVRVR-KD------E-------------KGLVTRDEVEGRMZM2G063042 -PH-WADQPTISKYMESM-WGLGVRVR-KD------E-------------KGLVTRDEVEGRMZM2G171548 -PQ-WTDQPMNARYVEAV-WRVGVRAR-PAPPD--DS-------------LGLVRRGEVVGRMZM2G022212 -PQ-WSDQTMNAKYIEDV-WRVGVRVR-PD------G-------------RGVVRKEELEGRMZM2G078465 -PD-WSDQTTNAKYIQDV-WRVGVRVR-PD------G-------------RGVVRSEEVEGRMZM2G110816 -PV-SADHFVNCAYVVNV-WKVGVELAT-------------------------SGQGDVKGRMZM2G159918 -PI-SGDQFINCAYIVKM-WEAGMAMDS-------------------------TDRDGVKGRMZM2G021786 -PV-SGDQFINCAYITGL-WKIGLRLGG-------------------------MMRDDVRGRMZM2G432291 -PV-SGDQFINCAYIVKV-WETGIRLPS-------------------------TNRNVVEGRMZM2G098892 -PY-FADQFLNQSYICDL-WGVGLKVCA---DA--DE-------------RGVVTKEEIRGRMZM2G098890 -PY-FADQFLNQKYICDV-WGTGLRIR-----A--NE-------------RGVFTKEEIRGRMZM2G328224 -PY-FTDQFLNQSYICDV-WRTGLKVPLPPGAA--HG-------------TGLVGRDVVRGRMZM2G031138 -PY-FCDQYLNRSYIVNV-WRTGLAVTP-------DA-------------DGIVGREELRGRMZM2G030821 -PY-FVDQFANRSYVCDI-WRTGLAVSP-------GE-------------DGVVTKEEVSGRMZM2G130256 -PY-FADQFINESYVCDV-WKTGLRLVV----K--DA-------------GGVLTSEHIAGRMZM2G363545 -PY-FTDQFTNQAYICDI-WKVGLRVVP----D--GG-------------DGIVAKERIMGRMZM2G128504 -PY-FTDQFVNQAYICDV-WKVGLPAEA----D---E-------------SGVVTKEHIAGRMZM2G046994 -PY-FADQFVNQGYICDV-WKVGLRAEA----D---G-------------SGVITKEHIAGRMZM2G004858 -PV-AWDQLVIGHLVADE-WKIGVDLRE---RR--RE-------------DGVVGRAAIC

Page 32: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

GRMZM2G073376 -PL-FFDQPIDGRLIVEE-WKIGLAVRD---WA--SK-------------GGLIGREDIAGRMZM2G440902 -PI-AFDQPTNSRLVTEV-WKNGIGLRD---MA--RA-------------DGVIGRGEIAGRMZM2G173315 -PL-LTDQLTNRRLVVRE-WGAGVSIGD---R-------------------GAVHADEVRGRMZM2G337048 -PL-LTDQLTNRRLVARE-WRAGVSVGD---R-------------------GAVRADEVRGRMZM5G834303 -PF-FADQQINSRFVGAV-WRNGLDMKD------------------------VCDRVVVEGRMZM2G083130 -PV-LSEQTTNCRQVCTA-WGIGAELPQ------------------------EAGSDEVAGRMZM2G476049 -PV-AADQQTNSRLACTE-WRVGVELGE------------------------NASREEVEGRMZM2G049798 -PG-FSDQYTNCKYSCEV-WGVGVRLEA------------------------TVEREQVAGRMZM2G118657 -PG-FADQYINCRYACEE-WGIGLRLDE------------------------ALRREQVAGRMZM2G169628 -PF-FAEQPTNCRYVCDK-WGIGMEIDN------------------------DVRREEVAGRMZM2G470524 -PF-FAEQTTNCRYACAN-WGIGLEIDN------------------------NVTRDEVAGRMZM2G089241 -PF-FAEQQTNCRYKRTE-WGVGMEIGG------------------------EVRRAELTGRMZM2G373124 -PF-FAEQQTNCRYKRTE-WGIGMEIGN------------------------DVRRGEVKGRMZM2G083935 -PF-FAEQQTNCRYKCTE-WGIGKEIGD------------------------DVQRGEVEGRMZM2G041699 -PF-FADQQTNCRYQCNE-WGVGMEIDS------------------------NVRRDAVAGRMZM2G132706 -PF-FAEQQTNCRYKCVE-WGVAMEVGD------------------------DVRREAVEGRMZM2G009125 -PF-FAEQQTNCRYTCVE-WGVAMEIGQ------------------------DVRREAVEGRMZM5G870067 -PF-FAEQQTNCRYTCAE-WGAAWAWRS------------------------ATTCGG-- .

GRMZM2G426242 TVLA--DVV--GEKGR----DVRARAK---ELAA-EA--ARA------V-ME-GGSSYADGRMZM5G854655 QALDMLMDG--GADGE----ARKTKAK---ELKA-KS--KTA------L-EH-GGSSYMNGRMZM2G179063 KALERLMDQ--GSQGE----HRRRKAQ---ELKA-KA--TGA------L-QD-GGSSYMNGRMZM2G035755 KAMDTLMDQ--GPKGE----ERRRKAH---ELKL-KA--KSA------L-EK-GGSSYTNGRMZM5G888620 KAIGRVMGD--GEDAE----AIREMAK---ELGE-KA--RRA------V-AN-GGSSYDDGRMZM2G113653 ERVRSAMAD------E----ELRGRAG---RVGE-RA--RRA------V-EA-GGSSYEAGRMZM2G178209 AAVSRLMDE--GEAAE----EMRMRAR---EFGV-KA--RKA------L-VE-GGSSYNNGRMZM2G325014 RALEAVMDG--GVVGA----ARQARAA---ELGR-KA--WDA------V-AR-GGSSDRNGRMZM2G325023 RAVAAVMDC--GEEGS----ARRARAA---ELGR-KA--REA------V-VH-GGSSFRNGRMZM2G067361 KAVRNIMHG--GDEGE----ERRRRAR---ALAA-KA--KTA------V-EK-GGSSHANGRMZM2G148277 AAVRSVMGG--SEDAE----DRRRRAR---ALAS-KA--QLA------T-QI-GGSSHGNGRMZM2G403740 EAVRSLMGA--GEEAD----ERRRRAR---ALAV-KA--RAA------M-QE-GGSSHRNGRMZM2G008935 RAVSALMGQ--GEETG----ERRRRAR---EYGE-KA--HGA------M-EK-GGSSYENGRMZM2G151332 RAVSALMGE--GKEAG----ERRRRAR---EYGE-KA--HGA------M-EK-GGSSYENGRMZM2G479038 KAVAELMGV--GADGT----ARRARAK---ELAA-KA--KAA------M-EE-GGSSYADGRMZM2G338465 KAVGELMDE--GPKGT----ARRGRAK---DLAA-KA--KVT------M-ME-GGSSYADGRMZM2G458776 KVVAELMDE--GPACA----ARRAKVK---ELAH-NT--VAA------V-TE-GGSSDIDGRMZM2G056335 RTVSELMDQ--GSSS-----TMRARAK---ELAA-EV--RAA------M-AK-GGSSDADGRMZM2G007012 RAVTDLMDE--GPAGA----ARRARAK---ELGQ-QM--RAA------M-AK-GGSSDTDGRMZM2G389944 RAVTDLMDE--GPAGA----ARRARAK---ELGQ-QM--RAA------M-AK-GGSSDTDGRMZM2G067424 RAVGRLMGD--DQQDEEVLAARKARSR---ELGA-AA--RAA------V-AE-GGSSSGDGRMZM2G074395 RAVAGFMEG--GEQRD----KLNARAG---ELAE-RA--RAA------V-SE-DGSSWRDGRMZM2G037545 QAVARFVEP--GGPGD----AARKRVK---ELSV-KA--RAA------M-AE-GGSSHHDGRMZM2G082037 RAVERFLEP--GGPGE----AARGRAR---DLAV-KA--HAA------V-AE-GGSSSRDGRMZM2G042865 RAVARFLEP--GGPGE----AARGRAR---DLAV-KA--HAA------V-AE-GGSSSRDGRMZM2G051474 NAIRRAIVGE--EAE-----RLRKRSS---ELRR-QS--AQA------L-SK-DGASHRGGRMZM2G372068 AVVRELVEGE-GKGA-----MVRAKVA---QLQK-AA--AEG------L-RE-GGAATTAGRMZM2G085854 AVVRELMTAE-GKGA-----AVRAKVE---ELQK-AA--AEG------L-RD-GGATAAAGRMZM2G426415 DTVREVMRGE-GKGA-----AVRAKVA---ELQK-AA--AEG------L-RD-GGAAAAAGRMZM2G156026 AVVRELMEGE--DGR-----AVRRRTG---DLQQ-AA--DLA------W-AS-DGSSRRAGRMZM2G007795 ASVKELMEGE--KGS-----AVRGRTR---ELRE-AS--KRA------W-SS-EGSSRRAGRMZM2G455075 RAVRSLMGGS-EEGR-----KAKEKAR---KMKA-AC--RKA------A-EK-GGSAYAAGRMZM2G039129 RAVKALMCDD-ETAR-----KVRDKVM---EMKL--------------------------GRMZM2G113794 RAVKALMCDG-ETAR-----KVRDKVM---EIKA-AC--RKA------M-EE-GGSSNMSGRMZM2G095261 RAVRSLMDADGEQGR-----RAREKAA---RMKA-VC--RKA------V-EE-GGSSHAAGRMZM2G063550 RAVRCLMGGSEEKGR-----KAREKAT---EAKA-LS--RNG------V-AS-GGSSDVSGRMZM2G415973 RAVRTLMGAS-EEGR-----KARAKAA---EAKA-AC--RNA------G-EE-GGSSCATGRMZM2G395508 RAVRALMGGG-EEGR-----KAREKAH---EMKA-AC--RKA------V-EE-RGSSYAAGRMZM2G324466 RAVRALMGGDNEEGR-----KAREKAA---EMQA-GC--RKA------V-ED-GGSSTATGRMZM2G131928 RAVRALMGGDNEEGR-----KAREKAA---EMQA-GC--RKA------V-ED-GGSSTATGRMZM2G155911 RAVKELMGGG-EEGR-----KAREKAM---EMRD-AC--RNA------V-EE-GGSSYSSGRMZM2G095807 AKVRLVME-A-EEGE-----QLRARVR---AHKGHAA--DMV------W-KD-GGSSRVSGRMZM2G096412 AKVRLVLEES-EEGN-----QLRTRVA---AHRN-AA--TMA------R-RG-GGSSRAAGRMZM2G060993 RKVKMVME-F-KEGE-----QLRARVT---AHRD-AA--AVA------W-KD-GGSSRAAGRMZM2G449019 AKIRLVME-S-EEGR-----ELRVRVA---ARTK-EA--TAA------M-EA-GGSSRVAGRMZM2G043295 AKVRLVME-S-EEGR-----HLRGRAV---ALKN-EA--QAA------L-RD-DGPSETSGRMZM2G381025 GKLRLALE-S-EEGT-----RLKKRAL---QLKK-ET--EEA------M-ED-GGSSEAAGRMZM2G122072 TKVRLVLE-S-EEGR-----EIRTRAA---EVKK-EA--HAA------L-ED-GGSSKAAGRMZM2G051683 AKVRWIMDS--EGGR-----MLRERTL---AAMRQAK---DA------L-RE-GGESEATGRMZM2G010987 AKVRWLLES--DGGR-----MLRKRTL---AAMRQAK---DA------L-RE-GGESEATGRMZM2G130119 AKVRLVMES--QQGE-----ELRGRLA---VAKDEAA--AAA------L-ET-AGSSKAA

Page 33: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

GRMZM2G105991 AKVRWVMQDS-DGAR-----ELKERAE---AARARAA---EA------L-AE-GGPSRAAGRMZM2G058314 KKVRLVMES--EEGE-----KLRERLA---LAKEKAA---EA------L-AD-GGPSRMAAC206788.3_FGP015 AKVRLVMEA--EEGR-----ILRERLA---VAREKAL---GA------T-KE-GGSSEVAGRMZM2G036409 AKVRLVMES--EEGK-----KLRERTA---TAKEMAA---DA------I-KQ-GGSSYVEGRMZM2G111344 AKVRLVMAPGSGDGE-----ELRQRLV---TAKDMAV---EV------L-KE-GGSSHVAGRMZM2G163519 RTVRRAMRGE-ESRA------LRRHAA---ELRE-VV-------------AR-NDADDAQGRMZM2G174192 RAVRRAMRGE-ESHA------LRRRAA---ELRE-VV-------------AR-NDADDAQGRMZM2G061321 DALRTAMAEN-Q---------DGTRVK---ELAE-VF-------------GN-DEANDQCGRMZM2G135722 AALRRVLVDE-E-CE-----VFGDKAK---ELAK-LF-------------GN-DEMNDQCGRMZM2G061289 AALRKVLVEE-G-CE-----VFGDKAE---VLAV-LF-------------GN-DEMNDQCGRMZM2G180283 TAIRAVMCEE-ESKR-----IFVANAK---RMQE-IV-------------AD-DECHKRYGRMZM2G066067 GAARAVMLEE-ETRG-----VFVANAL---KVQA-IV-------------AD-KELQDRYGRMZM2G022266 AAVREVMLVE-EARK-----VFVANAL---EMQR-VV-------------AD-KERHERYGRMZM2G162755 DKVKEVMADG----------KLRASVA---VARE-EA--AKA------V-AE-GGTSYRNGRMZM2G383404 KKVKEVMSDE----------AVRARTT---RTAE-EA--AKA------V-AE-GGTSYRSGRMZM2G162783 KKIKGMMGYD----------AVAEKAA---KVGD-AA--AAA------I-AK-CGTSYQSGRMZM2G099740 ALVMEAMGDD----------AMAVKTA---NVRE-AA--SRA------V-VD-GGTSYLCGRMZM2G154558 EVVAMVLGDT-LELA-----ALRRNAA---AEAE-KLIRAAG------E-NDRNGSSVKVGRMZM2G082249 EAERTVMGDT-AKGD-----EMRRVVA---AIAR-TM--EAA------W-EAPGGSAAESGRMZM2G159404 DVVETVMGQT-AKAA-----EMRRRVW---EIKE-VV--EGS------W-NDGGGSSRKAGRMZM2G086925 EAIEKMMVS--DEGY-----KIQQRAM---ALGQ-AI--RAS------A-AVGGGSENKDGRMZM2G075387 DAIDRVMAS--EEGA-----EIRRRAG---ALGE-AV--RGA------V-VE-GGSSRQDGRMZM2G120016 EVIEKVMAR--DEGL-----AVRERAK---ELME-FI--RRS------V-AE-GGSSRKDGRMZM2G168474 KVIEEAMLS--DSGM-----AVRQRAK---ELGE-AV--RAS------V-AD-GGNSRKDGRMZM2G110511 KVIEEAMLS--DSGM-----AVRQRAK---ELGE-AV--RAS------V-AD-GGNSRKDGRMZM2G160523 -LASVLADATGEKGH-----DVRTRAK---ALAA-EA--ARA------M-KP-GGTSYADGRMZM2G301148 -MAAAIAKAVGNEWG-----AVRERAD---ELGR-MA--AAA------V-AE-GGSSHRDAC234524.1_FGP005 EKVRKLMDADSDAGR-----KIRARAT---WAQQ-AA--MSA------V-GE-GGASRVAGRMZM2G416045 EKVWELMDAECKAAK-----QMRERVA---WAQQ-AA--KSA------V-SH-GGTSAMAGRMZM2G343426 EKV---------------------------------------------------------GRMZM2G091176 EKVRELMDAESKAAK-----RMRERAV---WAQQ-AA--KSA------V-SH-GGTSAMAGRMZM2G175910 TAVKELMFGEAGKAM-----ALR-----AKGIAA-QA--RLA------V-SD-GGSSWKEGRMZM2G006565 RVTSDLMTGETGAEA----------ARKMSALAA-KA--REA------V-AE-AGSSWRAGRMZM2G306328 KVTSELMTGEPGADA-----ASRDAARKMSALAA-KA--REA------V----AGSSWRAGRMZM2G085054 QAHGRQRGR--G-GHQ----EEDERAQ---DRCG-QG--HR-------------------GRMZM2G161335 AAIDRLFGT--K-EGE----EIKERMK---EFKI-AA--AKGIGIGVDV-DE-TASPRTDGRMZM5G815665 MAVTKLMTG--EDAAQ----MRGR-AY---HL---------K------I-LA-SAATSLPGRMZM2G097030 KAARKLMAG--ELGPQ----GPRERAR---LLKA-QA--KQC------V-AE-RGGISLAGRMZM2G463996 GAVTKLLCT--E-EGR----RMRQRAR---DLRD-KA--IEC------V-QE-EGASKSAGRMZM2G156127 AAVAALMAP--GEPGD----GLRRRAR---ELES-SA--ADC------M-TK-DGSSCTNGRMZM5G892627 AAISTMMGA--GGPGT----ALRGRAR---ELCR-RA--AEC------M-AK-AGSSDLNGRMZM2G173926 DAVRKLMGE--R-EGA----EMRRAAQ---ELCA-KL--AGC------L-ES-TGSSQVAGRMZM2G047910 DAVRKLMGE--R-EGA----EMRRAAQ---ELCA-KL--AGC------L-ES-TGSSQVAGRMZM2G117878 KAIKKLMEE--D-EGV----GIRGRAK---DLKE-KV--RMC------L-ES-SGSSQLAGRMZM2G022242 AAVASLLTG--EEGA-----RMRATAR---DLQA-RV--VKA------F-GP-DGGSVNNGRMZM2G165390 AAVEELLRG--EEGA-----RMRARAK---ELQA-LV--AEA------F-GP-GGECRKNGRMZM2G319965 RCVELLMGG--GDRAV----QVRANAS---GLKE-RA--RRA------V-AA-AGPLEACGRMZM5G832805 RCVELVMGQ--GTKAT----AIRERVK---ALRE-MA--QQA------A-RA-GGPAERNGRMZM5G896260 RCIELVMGD--GAGAV----AIRERAK---ALQE-TA--QAA------ASAA-GGPAETNGRMZM2G106443 RCIELVMGD--GARAV----AIRERMK---GLKT-MA--QAA------A-DT-GGSVETNGRMZM2G475884 RCVEKVMGS--TDSAS----AVRARAE---CWGQ-RA--KEA------A-AV-GGTSQRNGRMZM2G344993 RCIDEAMGN--LEAAA----EVRRMAA---EWKQ-VV--TKA------M-GK-GGSSDRNGRMZM2G316030 RCVEAAASG-----------AVAARAA---AWKR-KA--WAA------V-AD-GGSSHRNGRMZM2G363554 RCIDLATSD-----------MVRAKAA---VWRE-KA--RAA------A-SK-GGSSERNGRMZM2G457929 RCLDFATSE-----------MVRAKAA---VWRE-KA--RAA------A-SE-GGSSEMNGRMZM2G050748 EAVDAATTG--AE-AD----AMFANAM---FWSA-AA--RAA------L-TP-GGSSDRNGRMZM2G304712 EAVDAAVAG--PE-AD----AMLASAR---RWSA-AA--REA------V-AP-GGSSDAHGRMZM2G417945 EAVDAAVAG--PE-AD----AMLANAR---RWSA-AA--REA------V-AL-GGSSDAHGRMZM2G022101 ACVHEVMGG--PRA-A----VFRMAAK---AWKD-EA--AAA------V-AD-GGSSDRNGRMZM2G055446 RCIEEVMGG--P-EAV----AVLARSA---KWKA-EA--SAA------L-ST-GGSLDKGGRMZM2G073244 QSVEVVMGD--GAQGK----HIRARAQ---GWRD-KT--CAA------L-AE-GGSSDMAGRMZM2G024131 RCVRAVMDG--GEAAS----AARKAAG---EWRD-RA--RAA------V-AP-GGSSDRNAC199541.4_FGP007 RCIRQVMEG--ERKT-----EFRRNAA---KWMS-KA--KEA------M-QE-GGSSDKNAC199541.4_FGP001 RCIREVMGG--ERKH-----VYGRNAA---RWMH-KA--KEA------M-QE-GGSSDKNAC199541.4_FGP004 RCIREVMGG--ERKH-----VYGRNAA---RWMH-KA--KEA------M-QE-GGSSDKNAC199541.4_FGP002 RCIREVMGG--ERSH-----VYGRNAA---RWMH-KA--KEA------M-QE-GGSSDKNGRMZM2G334336 RCIKDVMDG--DRKD-----EYRMNAT---VWMK-KA--KEA------A-QY-GGSSDKNGRMZM2G095280 RCIKDVMDG--DRKD-----EYRMNAN---VWMK-KA--KEA------A-QY-GGSSDKNGRMZM2G035282 RCIKDVMDG--DSKD-----KYRKSAT---MWMQ-KA--KSA------M-QN-GGSSDKNGRMZM2G063042 RCIKDVMDG--DSKD-----KYRKSAT---MWMQ-KA--KAA------M-QN-GGSSDKNGRMZM2G171548 MRVEEVMDG--DKSA-----EFRRSAD---VWMA-KA--RAA------S-RE-GGSSDRN

Page 34: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

GRMZM2G022212 RCVREVMEG--ERSL-----DYIRNAA---GWKE-KA--RSA------M-SE-GGSSDKNGRMZM2G078465 RCVRDVMEG--EMGE-----EFRARAS---HWSS-KA--RKA------M-GE-GGSSDVAGRMZM2G110816 DCIERVMEG--DDGR-----RLQRKVN---ALRE-TV--TAG------E-AM-RAAKRNLGRMZM2G159918 DCIERVMEG--EEGR-----RLQEKVN---GMEK--V--VAG------E-AR-SIAKGNLGRMZM2G021786 AGVERVMDD--G--G-----HLQEKVW---ALRE-RV--VTP------E-AR-RGADRN-GRMZM2G432291 DCIERIMEG--EEGR-----RMQVNVD---EMRE-RV--VMG------F-DR-LARYSAPGRMZM2G098892 DKVARLLGD-----E-----AIKARTV---ALKS-AA--CAS------V-AD-GGSSHQDGRMZM2G098890 DKVNQLLAD-----D-----TIRARAL---SLKR-AA--CES------I-TD-GGSSHQDGRMZM2G328224 DKIEELLRD-----S-----ETKARAL---ALRD-LA--SRA------V-GD-GGSSRRNGRMZM2G031138 SKVEQVVGD-----A-----DIKDRAR---VLKD-EA--HRC------V-AE-GGSSNDNGRMZM2G030821 SKVDRVAGD-----E-----GIADRAR---VLKD-AA--CRC------V-AE-GGSSHENGRMZM2G130256 ARIEDLLND-----P-----AAMSRAR---ELQQ-VA--SRS------I-SK-DGTSFNNGRMZM2G363545 ERLTSLMGD-----S-----GVKERVK---RLKE-LA--ERS------M-GP-EGKSLKNGRMZM2G128504 SRVEELMGD-----A-----GMRERVE---DMKR-AA--RGS------V-TR-GGSSHRNGRMZM2G046994 GRVEELMSD-----A-----SMRERVE---AMKK-AA--LES------I-NR-GGSSLSNGRMZM2G004858 DTVTKLMDLTDDDSL-----EMRRRAA---ELRE-AS--RRA------V-QE-GGSSRCSGRMZM2G073376 RAVKKLMSSDETGTK-----ALRERAL---ELKE-AS--RRA------V-NE-GGSSYCNGRMZM2G440902 SAVDRLMRPDAAEFQ-----DMRKRVT---LWKD-AA--RAA------S-EE-GGSSWKDGRMZM2G173315 ARIQGIMAG--EHGL-----KLRDQVR---KLRA-TL--EAA------V-AP-GGSSRRNGRMZM2G337048 ARIEAVMGG--EDGL-----KLREQVK---KLRG-TL--EAA------V-AS-GGSSRHNGRMZM5G834303 STVREAMES-----E-----EIRRSAH---ALAE-QV--KRD------V-AD-DGASALEGRMZM2G083130 ALVREMMTG--RKGK-----DAREKTL---QWKR-LA--QVS------A-QP-GGLSYNNGRMZM2G476049 TAIRQVMGG--ERGE-----ELRRSAM---EWKE-KA--ALA------A-RP-GGSSWANGRMZM2G049798 MHVRNVMAS-----E-----EMRKSAA---KWKE-EA--EAA------G-GP-GGSSRENGRMZM2G118657 AHVEELMAGGTDRAR-----EMRRCAA---KWKA-AA--WKA------T-AP-GGSSCESGRMZM2G169628 RLVRAAIDG--ERGK-----AMRVKSV---VWKE-KA--RQA------V-ED-GGSSRKNGRMZM2G470524 RLIEEAMDG--EKGK-----DMKAKAT---VWKE-KA--VAA------T-ES-GGTSSVSGRMZM2G089241 ETIREAMDG--EKGR-----EMHRRAA---EWKE-KA--IRA------T-MS-GGSAENNGRMZM2G373124 ALIREAMEG--EKGR-----DMRRRVT---ELKG-SA--VAA------A-KL-NGRSMRNGRMZM2G083935 SLIREAMEG--EKGQ-----EMLRRVT---ELRD-SA--VAA------A-GP-DGRSMRNGRMZM2G041699 SLIAELMEG--EQGK-----EMRRRAL---EWRD-KA--IEV------A-KP-GGTSHRNGRMZM2G132706 ATIREAMGG--DKGK-----EMARRAA---EWKE-VA--AG----------A-AARSIANGRMZM2G009125 EKIREAMGG--EKGM-----EMQRRAG---EWQQ-TG--LRA------T-RP-GGRSYANGRMZM5G870067 RPWRRGYGH--TGGH-----GRGEREG---DASP-RG--GV----------A-GDRRARD

GRMZM2G426242 LDGLVQEIRNLR------------------------------------------------GRMZM5G854655 LEKLIQFGA---------------------------------------------------GRMZM2G179063 LEKLIVQSSVSRPNTCGV------------------------------------------GRMZM2G035755 LDNLILSFL---------------------------------------------------GRMZM5G888620 VGRLVDELMARRRSVKV-------------------------------------------GRMZM2G113653 VGALLEDVLRPQRQVQDLDAVRETRRDAE-------------------------------GRMZM2G178209 INLLIHEMGNRANVST--------------------------------------------GRMZM2G325014 MSLLVDFVEQMKATV---------------------------------------------GRMZM2G325023 VALLIQHVQHRASTRNPWIEKKPN-----------------------------DRR----GRMZM2G067361 VLDLINCFKTA-------------------------------------------------GRMZM2G148277 LQDLVKRFEA--------------------------------------------------GRMZM2G403740 LLDLVGRFEGVMTKDTKGA-----------------------------------------GRMZM2G008935 LTQLIESFGQVEARKG--------------------------------------------GRMZM2G151332 LTQLIESFGQVEARKG--------------------------------------------GRMZM2G479038 LDDMLRHVAELNMKKSHEEGTGFSTLPEL--------GTGSK--------N-NDNIGAGAGRMZM2G338465 LTDMIHHVAVLGSRQ---------------------------------------------GRMZM2G458776 VKNMLRHVVELSRKDEDLVLDAAEVAMK------------RK-------VD-MDD-----GRMZM2G056335 VKDIVRHVIEVAKNKREHARGHHS------------------------------------GRMZM2G007012 VRDLVRHVVEVARKKGEHEDTALAGGDHV--------ITSKE-------KA-MNGTG-GKGRMZM2G389944 VRDLVRHVVEVARKKGEHEDTALAVLLES--------ST---------------------GRMZM2G067424 WARLVYELKAFHGRHNDPQTYK--------------------------------------GRMZM2G074395 INRLIDDLLQARASGLPQMN-SVQLE----------------------------------GRMZM2G037545 LRAMIDDIMEEAGTAAAGPVLSG-------------------------------------GRMZM2G082037 LQRLIDDLVEGRAAAGVPTSPSVASVG-----------T---------------------GRMZM2G042865 LHRLIDDLVEARAATSSCNADSE-------------------------------------GRMZM2G051474 PSPLRGGLGAGVIVASLTTTKSTHARTPSVASVVAAPVIGSGIIAFGLPLPVHRVNCSVQGRMZM2G372068 LDEVMDKWEAEAN-----------------------------------------------GRMZM2G085854 LAEVVKEWTSADDSVY--------------------------------------------GRMZM2G426415 LAEVVQGWTTTTGGGEKD------------------------------------------GRMZM2G156026 LEEVVSRWKAGAIRRAAV------------------------------------------GRMZM2G007795 LGEVAGKLKAALVNGNGSAP----------------------------------------GRMZM2G455075 LQAVVQDMLESHVPGTAPK-----------------------------------------GRMZM2G039129 ------------------------------------------------------------GRMZM2G113794 LQRLCDALVEGAVHPGK-------------------------------------------GRMZM2G095261 LQRLAEALHDGAVIPKK-------------------------------------------

Page 35: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

GRMZM2G063550 VQKLAREILHKHDDKGCATASGESMGS-VVVPASPARII---------------------GRMZM2G415973 LQRLMCEISRHRGG----------------------------------------------GRMZM2G395508 LERLRHAIRKGANTATAHFKA-------------PQPLI---------------------GRMZM2G324466 LTKLSNALCRND------------------------------------------------GRMZM2G131928 LTKLSNALCRND------------------------------------------------GRMZM2G155911 LRRLSEKICKVDKNL---------------------------------------------GRMZM2G095807 FRQFLSDVVNVSPDRTLG------------------------------------------GRMZM2G096412 FGQFLSDAAKLARE----------------------------------------------GRMZM2G060993 FGLFLSDVDNHVHKAKTWSSANGRDGK-LGQS----------------------------GRMZM2G449019 FAQFLADVRSTRHNVCKL------------------------------------------GRMZM2G043295 FARFLFDAKNLQGHLGHGSE----------------------------------------GRMZM2G381025 FLRFLSDVANIHNQIG--------------------------------------------GRMZM2G122072 FLQFLSDVKNIN------------------------------------------------GRMZM2G051683 LAGLVDDWKRT-------------------------------------------------GRMZM2G010987 LTGLVDEWKRI-------------------------------------------------GRMZM2G130119 LDDFISNLQISRNQ----------------------------------------------GRMZM2G105991 FLEFVLDLLASEGMVNV-------------------------------------------GRMZM2G058314 FEEFLKDIMLAK------------------------------------------------AC206788.3_FGP015 FAEFFGDLDKSSSPSVNGECD---------------------------------------GRMZM2G036409 LGEFLKGLGRK-------------------------------------------------GRMZM2G111344 FDAFLTDLLKNTRTEKSGFL----------------------------------------GRMZM2G163519 VAALVQRMARLCGKGQQRVAVPN-------------------------------------GRMZM2G174192 VAALVQRMARLCGKGQQRVAVPN-------------------------------------GRMZM2G061321 LRDFLRYLSEYIRQHQG-------------------------------------------GRMZM2G135722 VRDFLKCMSEYSRQRQVAL-----------------------------------------GRMZM2G061289 VRDFLKCMLEYSRQHQGAL-----------------------------------------GRMZM2G180283 IDEFVQSLRTYKN-----------------------------------------------GRMZM2G066067 VDEFIQQLLIRGRPCPASS-----------------------------------------GRMZM2G022266 IDEFIRQLRSYSTPPAAS------------------------------------------GRMZM2G162755 MHDFIAKLKGGA------------------------------------------------GRMZM2G383404 MEEFISSVKATVAS----------------------------------------------GRMZM2G162783 LEEFVQRCRDAERK----------------------------------------------GRMZM2G099740 LAAFVHRCIAPREVI---------------------------------------------GRMZM2G154558 MQMFFNEMSHLF------------------------------------------------GRMZM2G082249 LEGFLRCVEP--------------------------------------------------GRMZM2G159404 MEDFLRAMNLR-------------------------------------------------GRMZM2G086925 LDKFIAHISR--------------------------------------------------GRMZM2G075387 LEELVAYVTR--------------------------------------------------GRMZM2G120016 LDDFVAYIAR--------------------------------------------------GRMZM2G168474 LDDFIGYITRFSKFNKKPSKFSNTFN----------------------------------GRMZM2G110511 LDDFIGYITR--------------------------------------------------GRMZM2G160523 LELLVQEIRNRKLS----------------------------------------------GRMZM2G301148 LEEFVQMLLTASFHC---------------------------------------------AC234524.1_FGP005 LEKLIIYVGVCRTGVDKQYKCDKSMEMWI--------------------NNNTDDRRNGVGRMZM2G416045 LLKLVEDLHET-----------------------------------------YDDGVVGKGRMZM2G343426 ------------------------------------------------------------GRMZM2G091176 LLKLVEELQET-----------------------------------------YDDGVVGKGRMZM2G175910 VEEMISELRLRGVDMN-------------------------------------GKANGGTGRMZM2G006565 AEELIGVLSKGNTPQS--------------------------------------------GRMZM2G306328 AGELIGVLSKRKRSKP-------------------------------------QS-----GRMZM2G085054 ------------------------------------------------------------GRMZM2G161335 LTDLVDLIKSF-------------------------------------------------GRMZM5G815665 IDSLIHYISSL-------------------------------------------------GRMZM2G097030 LDGLVDYICSL-------------------------------------------------GRMZM2G463996 IQLLIDRIASF-------------------------------------------------GRMZM2G156127 VDKLVDHILTL-------------------------------------------------GRMZM5G892627 VDKLVNHIMSLTARRCQ-------------------------------------------GRMZM2G173926 IDKLVSYILSL-------------------------------------------------GRMZM2G047910 IDKLVSYILSL-------------------------------------------------GRMZM2G117878 VDKLVDHILSL-------------------------------------------------GRMZM2G022242 FHKFVDTCLTVGRDMHLNARGNH---------------------------PM--------GRMZM2G165390 FDRFVEIVCRA-------------------------------------------------GRMZM2G319965 LESFVETMQGLGRSGKQT----------------------------------YVSWCQIGGRMZM5G832805 LEDFVNSVGDSFRPVGISVA-EK---------------------------TDESRTCSSEGRMZM5G896260 LCHLVKTMSK--------------------------------------------------GRMZM2G106443 LRHFVKTFQALEP-----------------------------------------------GRMZM2G475884 LRAFASGL----------------------------------------------------GRMZM2G344993 LMTFVDGARNAV------------------------------------------------GRMZM2G316030 LTEFLRQIGHGRGD----------------------------------------------GRMZM2G363554 LKAFVAKQIAGGNN----------------------------------------------GRMZM2G457929 LRAFVAKQIAGGKN----------------------------------------------

Page 36: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

GRMZM2G050748 VQAFIDEVSRQARQRTS-------------------------------------------GRMZM2G304712 VQAFVDEVSRRACGVQVAKVVPP---------------------------S--SEELHQSGRMZM2G417945 IQAFVDEVARRACVVPPSSEIPS---------------------------P--S------GRMZM2G022101 LHAFVQEIRRFHETRAGGSMINS---------------------------N--I------GRMZM2G055446 IQEFVAAIL---------------------------------------------------GRMZM2G073244 TQEFVDAVLSIGMNYSSMPFV---------------------------------------GRMZM2G024131 LDEFVQFVRAGATEK---------------------------------------------AC199541.4_FGP007 IAEFAAKYLSA-------------------------------------------------AC199541.4_FGP001 IAEFAAKYLPK-------------------------------------------------AC199541.4_FGP004 IAEFAAKYLPK-------------------------------------------------AC199541.4_FGP002 IAEFAAKYLPK-------------------------------------------------GRMZM2G334336 IVELVMCPCVATAYKLFDTKLVY---------------------------NNYMKTINIYGRMZM2G095280 IAEFVAKYSSS-------------------------------------------------GRMZM2G035282 ITEFVAKYSLS-------------------------------------------------GRMZM2G063042 ITEFAAKYSSGQKNIVA-------------------------------------------GRMZM2G171548 IAEFVAKYAHRTPSE---------------------------------------------GRMZM2G022212 VLDFLGALGLKK------------------------------------------------GRMZM2G078465 ISNFLSCFGHSAHVTAAN------------------------------------------GRMZM2G110816 T-LFMDRINGS-------------------------------------------------GRMZM2G159918 D-LFINGIESGDDWVTKL------------------------------------------GRMZM2G021786 VRSFVDEITRDHPLVVQLYSVL--------------------------------------GRMZM2G432291 SYSLRSEIYCRFLKFILKYNTFYIMTIWQ--------------------KLWKRKS----GRMZM2G098892 LLKLVNLLREK-------------------------------------------------GRMZM2G098890 LLKLVNLLKEQ-------------------------------------------------GRMZM2G328224 LRQFLGLVRGSES-----------------------------------------------GRMZM2G031138 FKKLVNLLSE--------------------------------------------------GRMZM2G030821 FNRFVHLLRG--------------------------------------------------GRMZM2G130256 LRDVIDAMKG--------------------------------------------------GRMZM2G363545 INAFMESMTKRSPVLAPRHLV-------V--------------------GHWITASCNLQGRMZM2G128504 FDMFVQAMKRRESIDSQNN-----------------------------------------GRMZM2G046994 FDMFVDAMKA--------------------------------------------------GRMZM2G004858 LNSFVRDVIEGRLNVAETSR----------------------------------------GRMZM2G073376 LSSLMETVCTPK------------------------------------------------GRMZM2G440902 VTSFINFVSR--------------------------------------------------GRMZM2G173315 FDDFVDELKRKLKDAS--------------------------------------------GRMZM2G337048 FDEFVEELKRRCGGR---------------------------------------------GRMZM5G834303 FKRLISFITELSTSAAQGTPS-------S--------------------KS---------GRMZM2G083130 IGRMVENILLKHI-----------------------------------------------GRMZM2G476049 LEKVANEVLAPLIAAHRKECD-------D--------------------AMELS------GRMZM2G049798 LLSMVRALSSAPNSPDA-------------------------------------------GRMZM2G118657 LDRLVDDLRLWEEDAELATAT-------P--------------------LIR--------GRMZM2G169628 LDRLVDFLLAGSDLPC--------------------------------------------GRMZM2G470524 IDRLVEFLLEGNVPTAA-------------------------------------------GRMZM2G089241 LNKVVNEVLLRKIG----------------------------------------------GRMZM2G373124 VDRFIDEVLLA-------------------------------------------------GRMZM2G083935 VDRLIEEVLLA-------------------------------------------------GRMZM2G041699 FDDLVRNVLLPKN-----------------------------------------------GRMZM2G132706 LDTLINDVLLSPARLGGSLKT-------T-------------------------------GRMZM2G009125 LDKLVADVLLSGTSGKSS------------------------------------------GRMZM5G870067 A-ARRALVRQPGEAGD--------------------------------------------

GRMZM2G426242 ------------------------------------------------------------GRMZM5G854655 ------------------------------------------------------------GRMZM2G179063 ------------------------------------------------------------GRMZM2G035755 ------------------------------------------------------------GRMZM5G888620 ------------------------------------------------------------GRMZM2G113653 IFN---------------------------------------------------------GRMZM2G178209 ------------------------------------------------------------GRMZM2G325014 ------------------------------------------------------------GRMZM2G325023 ------------------------------------------------------------GRMZM2G067361 ------------------------------------------------------------GRMZM2G148277 ------------------------------------------------------------GRMZM2G403740 ------------------------------------------------------------GRMZM2G008935 ------------------------------------------------------------GRMZM2G151332 ------------------------------------------------------------GRMZM2G479038 ALSVQS------------------------------------------------------GRMZM2G338465 ------------------------------------------------------------GRMZM2G458776 ------------------------------------------------------------GRMZM2G056335 ------------------------------------------------------------GRMZM2G007012 HY----------------------------------------------------------

Page 37: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

GRMZM2G389944 ------------------------------------------------------------GRMZM2G067424 ------------------------------------------------------------GRMZM2G074395 ------------------------------------------------------------GRMZM2G037545 ------------------------------------------------------------GRMZM2G082037 ------------------------------------------------------------GRMZM2G042865 ------------------------------------------------------------GRMZM2G051474 CDHPQQTSTCAKDTSANATAFVLGEKPTRISGTKIHRETNLST-NEAVAGTFEADSRQMMGRMZM2G372068 ------------------------------------------------------------GRMZM2G085854 ------------------------------------------------------------GRMZM2G426415 ------------------------------------------------------------GRMZM2G156026 ------------------------------------------------------------GRMZM2G007795 ------------------------------------------------------------GRMZM2G455075 ------------------------------------------------------------GRMZM2G039129 ------------------------------------------------------------GRMZM2G113794 ------------------------------------------------------------GRMZM2G095261 ------------------------------------------------------------GRMZM2G063550 ------------------------------------------------------------GRMZM2G415973 ------------------------------------------------------------GRMZM2G395508 ------------------------------------------------------------GRMZM2G324466 ------------------------------------------------------------GRMZM2G131928 ------------------------------------------------------------GRMZM2G155911 ------------------------------------------------------------GRMZM2G095807 ------------------------------------------------------------GRMZM2G096412 ------------------------------------------------------------GRMZM2G060993 ------------------------------------------------------------GRMZM2G449019 ------------------------------------------------------------GRMZM2G043295 ------------------------------------------------------------GRMZM2G381025 ------------------------------------------------------------GRMZM2G122072 ------------------------------------------------------------GRMZM2G051683 ------------------------------------------------------------GRMZM2G010987 ------------------------------------------------------------GRMZM2G130119 ------------------------------------------------------------GRMZM2G105991 ------------------------------------------------------------GRMZM2G058314 ------------------------------------------------------------AC206788.3_FGP015 ------------------------------------------------------------GRMZM2G036409 ------------------------------------------------------------GRMZM2G111344 ------------------------------------------------------------GRMZM2G163519 ------------------------------------------------------------GRMZM2G174192 ------------------------------------------------------------GRMZM2G061321 ------------------------------------------------------------GRMZM2G135722 ------------------------------------------------------------GRMZM2G061289 ------------------------------------------------------------GRMZM2G180283 ------------------------------------------------------------GRMZM2G066067 ------------------------------------------------------------GRMZM2G022266 ------------------------------------------------------------GRMZM2G162755 ------------------------------------------------------------GRMZM2G383404 ------------------------------------------------------------GRMZM2G162783 ------------------------------------------------------------GRMZM2G099740 ------------------------------------------------------------GRMZM2G154558 ------------------------------------------------------------GRMZM2G082249 ------------------------------------------------------------GRMZM2G159404 ------------------------------------------------------------GRMZM2G086925 ------------------------------------------------------------GRMZM2G075387 ------------------------------------------------------------GRMZM2G120016 ------------------------------------------------------------GRMZM2G168474 ------------------------------------------------------------GRMZM2G110511 ------------------------------------------------------------GRMZM2G160523 ------------------------------------------------------------GRMZM2G301148 ------------------------------------------------------------AC234524.1_FGP005 CDNIEHVALA--------------------------------------------------GRMZM2G416045 CANSV-------------------------------------------------------GRMZM2G343426 ------------------------------------------------------------GRMZM2G091176 CANSV-------------------------------------------------------GRMZM2G175910 CASIL-------------------------------------------------------GRMZM2G006565 ------------------------------------------------------------GRMZM2G306328 ------------------------------------------------------------GRMZM2G085054 ------------------------------------------------------------GRMZM2G161335 ------------------------------------------------------------GRMZM5G815665 ------------------------------------------------------------GRMZM2G097030 ------------------------------------------------------------GRMZM2G463996 ------------------------------------------------------------

Page 38: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

GRMZM2G156127 ------------------------------------------------------------GRMZM5G892627 ------------------------------------------------------------GRMZM2G173926 ------------------------------------------------------------GRMZM2G047910 ------------------------------------------------------------GRMZM2G117878 ------------------------------------------------------------GRMZM2G022242 ------------------------------------------------------------GRMZM2G165390 ------------------------------------------------------------GRMZM2G319965 KISIEL------------------------------------------------------GRMZM5G832805 ------------------------------------------------------------GRMZM5G896260 ------------------------------------------------------------GRMZM2G106443 ------------------------------------------------------------GRMZM2G475884 ------------------------------------------------------------GRMZM2G344993 ------------------------------------------------------------GRMZM2G316030 ------------------------------------------------------------GRMZM2G363554 ------------------------------------------------------------GRMZM2G457929 ------------------------------------------------------------GRMZM2G050748 ------------------------------------------------------------GRMZM2G304712 PVRVQT------------------------------------------------------GRMZM2G417945 ------------------------------------------------------------GRMZM2G022101 ------------------------------------------------------------GRMZM2G055446 ------------------------------------------------------------GRMZM2G073244 ------------------------------------------------------------GRMZM2G024131 ------------------------------------------------------------AC199541.4_FGP007 ------------------------------------------------------------AC199541.4_FGP001 ------------------------------------------------------------AC199541.4_FGP004 ------------------------------------------------------------AC199541.4_FGP002 ------------------------------------------------------------GRMZM2G334336 YKQLQTYLLARTL-----------------------------------------------GRMZM2G095280 ------------------------------------------------------------GRMZM2G035282 ------------------------------------------------------------GRMZM2G063042 ------------------------------------------------------------GRMZM2G171548 ------------------------------------------------------------GRMZM2G022212 ------------------------------------------------------------GRMZM2G078465 ------------------------------------------------------------GRMZM2G110816 ------------------------------------------------------------GRMZM2G159918 ------------------------------------------------------------GRMZM2G021786 ------------------------------------------------------------GRMZM2G432291 ------------------------------------------------------------GRMZM2G098892 ------------------------------------------------------------GRMZM2G098890 ------------------------------------------------------------GRMZM2G328224 ------------------------------------------------------------GRMZM2G031138 ------------------------------------------------------------GRMZM2G030821 ------------------------------------------------------------GRMZM2G130256 ------------------------------------------------------------GRMZM2G363545 PGGRGPL-DQRHIR-----GEESSEDPNDADGEAVTAEQRLLGSPAPGPGCWHLNSS--MGRMZM2G128504 ------------------------------------------------------------GRMZM2G046994 ------------------------------------------------------------GRMZM2G004858 ------------------------------------------------------------GRMZM2G073376 ------------------------------------------------------------GRMZM2G440902 ------------------------------------------------------------GRMZM2G173315 ------------------------------------------------------------GRMZM2G337048 ------------------------------------------------------------GRMZM5G834303 ------------------------------------------------------------GRMZM2G083130 ------------------------------------------------------------GRMZM2G476049 ------------------------------------------------------------GRMZM2G049798 ------------------------------------------------------------GRMZM2G118657 ------------------------------------------------------------GRMZM2G169628 ------------------------------------------------------------GRMZM2G470524 ------------------------------------------------------------GRMZM2G089241 ------------------------------------------------------------GRMZM2G373124 ------------------------------------------------------------GRMZM2G083935 ------------------------------------------------------------GRMZM2G041699 ------------------------------------------------------------GRMZM2G132706 ------------------------------------------------------------GRMZM2G009125 ------------------------------------------------------------GRMZM5G870067 ------------------------------------------------------------

GRMZM2G426242 -----------------------------------------------------------GRMZM5G854655 -----------------------------------------------------------GRMZM2G179063 -----------------------------------------------------------

Page 39: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

GRMZM2G035755 -----------------------------------------------------------GRMZM5G888620 -----------------------------------------------------------GRMZM2G113653 -----------------------------------------------------------GRMZM2G178209 -----------------------------------------------------------GRMZM2G325014 -----------------------------------------------------------GRMZM2G325023 -----------------------------------------------------------GRMZM2G067361 -----------------------------------------------------------GRMZM2G148277 -----------------------------------------------------------GRMZM2G403740 -----------------------------------------------------------GRMZM2G008935 -----------------------------------------------------------GRMZM2G151332 -----------------------------------------------------------GRMZM2G479038 -----------------------------------------------------------GRMZM2G338465 -----------------------------------------------------------GRMZM2G458776 -----------------------------------------------------------GRMZM2G056335 -----------------------------------------------------------GRMZM2G007012 -----------------------------------------------------------GRMZM2G389944 -----------------------------------------------------------GRMZM2G067424 -----------------------------------------------------------GRMZM2G074395 -----------------------------------------------------------GRMZM2G037545 -----------------------------------------------------------GRMZM2G082037 -----------------------------------------------------------GRMZM2G042865 -----------------------------------------------------------GRMZM2G051474 STEQTIEVPSDTFTLLQ--AITSVEDVVLVEDASYDEEATLVMQTTFDGPIFITTIDYGGRMZM2G372068 -----------------------------------------------------------GRMZM2G085854 -----------------------------------------------------------GRMZM2G426415 -----------------------------------------------------------GRMZM2G156026 -----------------------------------------------------------GRMZM2G007795 -----------------------------------------------------------GRMZM2G455075 -----------------------------------------------------------GRMZM2G039129 -----------------------------------------------------------GRMZM2G113794 -----------------------------------------------------------GRMZM2G095261 -----------------------------------------------------------GRMZM2G063550 -----------------------------------------------------------GRMZM2G415973 -----------------------------------------------------------GRMZM2G395508 -----------------------------------------------------------GRMZM2G324466 -----------------------------------------------------------GRMZM2G131928 -----------------------------------------------------------GRMZM2G155911 -----------------------------------------------------------GRMZM2G095807 -----------------------------------------------------------GRMZM2G096412 -----------------------------------------------------------GRMZM2G060993 -----------------------------------------------------------GRMZM2G449019 -----------------------------------------------------------GRMZM2G043295 -----------------------------------------------------------GRMZM2G381025 -----------------------------------------------------------GRMZM2G122072 -----------------------------------------------------------GRMZM2G051683 -----------------------------------------------------------GRMZM2G010987 -----------------------------------------------------------GRMZM2G130119 -----------------------------------------------------------GRMZM2G105991 -----------------------------------------------------------GRMZM2G058314 -----------------------------------------------------------AC206788.3_FGP015 -----------------------------------------------------------GRMZM2G036409 -----------------------------------------------------------GRMZM2G111344 -----------------------------------------------------------GRMZM2G163519 -----------------------------------------------------------GRMZM2G174192 -----------------------------------------------------------GRMZM2G061321 -----------------------------------------------------------GRMZM2G135722 -----------------------------------------------------------GRMZM2G061289 -----------------------------------------------------------GRMZM2G180283 -----------------------------------------------------------GRMZM2G066067 -----------------------------------------------------------GRMZM2G022266 -----------------------------------------------------------GRMZM2G162755 -----------------------------------------------------------GRMZM2G383404 -----------------------------------------------------------GRMZM2G162783 -----------------------------------------------------------GRMZM2G099740 -----------------------------------------------------------GRMZM2G154558 -----------------------------------------------------------GRMZM2G082249 -----------------------------------------------------------GRMZM2G159404 -----------------------------------------------------------GRMZM2G086925 -----------------------------------------------------------GRMZM2G075387 -----------------------------------------------------------GRMZM2G120016 -----------------------------------------------------------

Page 40: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

GRMZM2G168474 -----------------------------------------------------------GRMZM2G110511 -----------------------------------------------------------GRMZM2G160523 -----------------------------------------------------------GRMZM2G301148 -----------------------------------------------------------AC234524.1_FGP005 -----------------------------------------------------------GRMZM2G416045 -----------------------------------------------------------GRMZM2G343426 -----------------------------------------------------------GRMZM2G091176 -----------------------------------------------------------GRMZM2G175910 -----------------------------------------------------------GRMZM2G006565 -----------------------------------------------------------GRMZM2G306328 -----------------------------------------------------------GRMZM2G085054 -----------------------------------------------------------GRMZM2G161335 -----------------------------------------------------------GRMZM5G815665 -----------------------------------------------------------GRMZM2G097030 -----------------------------------------------------------GRMZM2G463996 -----------------------------------------------------------GRMZM2G156127 -----------------------------------------------------------GRMZM5G892627 -----------------------------------------------------------GRMZM2G173926 -----------------------------------------------------------GRMZM2G047910 -----------------------------------------------------------GRMZM2G117878 -----------------------------------------------------------GRMZM2G022242 -----------------------------------------------------------GRMZM2G165390 -----------------------------------------------------------GRMZM2G319965 -----------------------------------------------------------GRMZM5G832805 -----------------------------------------------------------GRMZM5G896260 -----------------------------------------------------------GRMZM2G106443 -----------------------------------------------------------GRMZM2G475884 -----------------------------------------------------------GRMZM2G344993 -----------------------------------------------------------GRMZM2G316030 -----------------------------------------------------------GRMZM2G363554 -----------------------------------------------------------GRMZM2G457929 -----------------------------------------------------------GRMZM2G050748 -----------------------------------------------------------GRMZM2G304712 -----------------------------------------------------------GRMZM2G417945 -----------------------------------------------------------GRMZM2G022101 -----------------------------------------------------------GRMZM2G055446 -----------------------------------------------------------GRMZM2G073244 -----------------------------------------------------------GRMZM2G024131 -----------------------------------------------------------AC199541.4_FGP007 -----------------------------------------------------------AC199541.4_FGP001 -----------------------------------------------------------AC199541.4_FGP004 -----------------------------------------------------------AC199541.4_FGP002 -----------------------------------------------------------GRMZM2G334336 -----------------------------------------------------------GRMZM2G095280 -----------------------------------------------------------GRMZM2G035282 -----------------------------------------------------------GRMZM2G063042 -----------------------------------------------------------GRMZM2G171548 -----------------------------------------------------------GRMZM2G022212 -----------------------------------------------------------GRMZM2G078465 -----------------------------------------------------------GRMZM2G110816 -----------------------------------------------------------GRMZM2G159918 -----------------------------------------------------------GRMZM2G021786 -----------------------------------------------------------GRMZM2G432291 -----------------------------------------------------------GRMZM2G098892 -----------------------------------------------------------GRMZM2G098890 -----------------------------------------------------------GRMZM2G328224 -----------------------------------------------------------GRMZM2G031138 -----------------------------------------------------------GRMZM2G030821 -----------------------------------------------------------GRMZM2G130256 -----------------------------------------------------------GRMZM2G363545 RSKKIFGLS-ISLVLINLASILERADENL-LPAVYKEVFLLFTMTALQC------LR--GRMZM2G128504 -----------------------------------------------------------GRMZM2G046994 -----------------------------------------------------------GRMZM2G004858 -----------------------------------------------------------GRMZM2G073376 -----------------------------------------------------------GRMZM2G440902 -----------------------------------------------------------GRMZM2G173315 -----------------------------------------------------------GRMZM2G337048 -----------------------------------------------------------GRMZM5G834303 -----------------------------------------------------------GRMZM2G083130 -----------------------------------------------------------GRMZM2G476049 -----------------------------------------------------------

Page 41: · Web viewSupplemental Data. Casas et al. (2016). Plant Cell 10.1105/tpc.16.00003 Supplemental Data Set 1. Alignment used to generate the phylogeny presented in Supplemental Figure

GRMZM2G049798 -----------------------------------------------------------GRMZM2G118657 -----------------------------------------------------------GRMZM2G169628 -----------------------------------------------------------GRMZM2G470524 -----------------------------------------------------------GRMZM2G089241 -----------------------------------------------------------GRMZM2G373124 -----------------------------------------------------------GRMZM2G083935 -----------------------------------------------------------GRMZM2G041699 -----------------------------------------------------------GRMZM2G132706 -----------------------------------------------------------GRMZM2G009125 -----------------------------------------------------------GRMZM5G870067 -----------------------------------------------------------