Biochem of cell.ppt

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    04/20/16 1

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    Biochemical Compositionof Cell

    Dr. Farhana Ayub

    Assistant Professor 

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    What is Cell ?

    The cell is defined as any of the protoplasmic mass making

    up organized tissue consisting of a nucleus and the

    cytoplasm surrounding the nucleus.

     The nucleus is separated from the cytoplasm by the nuclearenvelope also called nuclear membrane.

    The cytoplasm is surrounded by a membrane called cell or

    plasma membrane or even plasmalemma.

    THE CELL

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    Cont…

    The cell is the structural and functioned unit of all living

    organism.

    The nucleus contains the chromosomes that are made up of

    DN molecules. Each chromosome is actually one DN molecule.

    The nucleus also contains some !Ns and large number of

    factors that regulate the e"pression of genes.

    THE CELL

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    Cont…

    The cytoplasm is composed of#

    Cytosol

    $uspended particles and organelles.

    %rganelles are specialzed structured and include# &itochondria

    Lysosomes

    E!

    'ree ribosomes

    THE CELL

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    Cont…

    THE CELL

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    THE CELL

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    Cytoplasm#

    $tructure# gel*like material found inside the cell+ made of,ater+ salts+ and organic materials.

    'unction# holds the organelles+ keeps them separate

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    Cell Organelles

    &itochondria#

    -po,erhouse of the cell

    $elf replicative

    $tructure# t,o lipid bilayer membranes

    outer membrane

    inner membrane / shelves ,ith attached o"idative

    enzymes &atri"0 contains necessary enzymes

    'unction# transform the energy in food to energy the cell

    can use to drive chemical reactions.

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    Mitochonria

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    Formation of A!P

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    "ses of A!P

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      #$DOP%A&M'C (#!'C"%"M

    Ultra-microscopic organelle

    which are present in allEukaryotes, responsible for the

     protein, carbohydrates, lipids

    and steroid hormone synthesis arecalled 

    Endoplasmic Reticulum.

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    Cell Organelles

    Endoplasmic !eticulum#

    $tructure# tubular 1 flat vesicular

    2nterconnected ,ith one another 

    made of lipid bilayer along ,ith protein Endoplasmic matri"

    Location# located ne"t to the nuclear membrane and

    connected to it

    'unctions#

    Conduction

    &etabolism

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    !ypes of #(

    $mooth E!#

    does not contain ribosomes+

    makes lipids+ transports proteins

    Drugs deto"ificationContain enzymes for glycogen breakdo,n

    !ough E!#

    contains ribosomes

    makes proteins

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    Cell Organelles

    )olgi 3ody#

    $tructure# 4 or more stacked layers of thin+ flat enclosed

    vesicles

    Location# near the nucleus Function)

    packages proteins from the E!

    $ynthesize certain CH%

    hyaluronic acid 1 chondroitin sulfate

    Lysosomes5 secretory vesicles

    distribute them around or outside of the cell.

    (rominent in secretory cells

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     &tructure

    Distinct cup like structure

    $eparated from nucleus by !ough E!

    Consists of a number of flattenedmembranous cisterns arranged in a stacked

    ,ith associated vacuoles and vesicles

    surrounding its surface.

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      Functions

    2t act as sorting device+receive protein from

    !oughE!.

    !e6ect those proteins having no signal ortransiet peptide region.

    )olgi comple" receive synthesized protein

    from its cis side by !ough E! throughtransfer vesicles.

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    Formation of proteins* lipis + ,esicles from #( +

    -A

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    Cell Organelles

    !ibosomes#

    $tructure#

    made of !N and proteins

    'unction# produce proteins

    Location#

    'ree in cytosol

    attached to the endoplasmic reticulum.

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    %ysosomes

    'ormed from )olgi apparatus $tructure#

    lipid bilayer 

    $ac filled ,ith enzymes Hydrolases Compound 7 ,ater 

    (roteins888888. a.a

    )lycogen88888...)lucose Lipids8888888..'atty acid 1 glycerol

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    %ysosomes

    Bactericial agents

    Lysozymes

    Dissolve the bacterial cell membrane

    Lysoferrin 3inds iron

     cid

     ctivates hydrolases 1 inactivates bacterial metabolism

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    Autophagy

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    /etero Phagy

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    (elationship of %ysosomes 0ith Disease)

    Lysosomal membrane release their enclosed hydrolases

    in response to certain circumstances+ such as ionizing

    radiation+ some carcinogens+ silica particles+ asbestos

    dust+ heat and certain drugs0 cell death may take place in

    some cases+ or the genome may undergo mutation

    leading to malignancies.

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    (elationship of %ysosomes 0ith Disease)

    2n case of hyperuricemia+ uric acid entering the cell may

    damage the lysosomal membrane releasing hydolases

    that lead to gouty arthritis.

    %steoclasts of bones may release lysosomal hydrolases

    that cause the erosion of bones.

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    (elationship of %ysosomes 0ith Disease)

    Lipofusin# indigestible residue of the breakdo,n of cellular

    material +rich in protein and lipids.it is the age pigment ,hich

    has been implicated in ageing process.

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    %ysosomal &torage Desease)

    There are more than 9: different lysosomal storagediseases and these are classified on the basis of the natureof the stored material.

    $alient features of these diseases are the involvement ofnervous system

    ;idney &uscles

    Liver  spleen Heart 3ones.

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    $ucleus

    Control center of the cell Contain DN

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    &tructure of nucleus

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    Cell Organelles

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    Chromatin

    $ubstance of chromosomes#

    Consist of mostly DN

    $mall amount of !N is also present.

    Chromatin is the combination of DN and (roteins. &ostimportant proteins are Histones. types=

    2t occur in T,o forms#

    Euchromatin

    Heterochromatin

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    (ole of /istones)

    !esponsible for (ackaging of chromosomal DN into a form

    called Nucleosome that represent primary level of DN

    organization

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    Pero1isomes

    2mportant organelles specially present in liver

    and kidney.

    &icrobodies and lined by single membraneand rich in enzymes.

    $ynthesized on polyribosomes and fold prior

    to entry into them

    (ero"ins are involved in their production.

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    Pero1isomes

    2nvolved in metabolism of

    cholesterol+plasmalogen bile acids+D*amino

    acids and H % .₂ ₂

    ?enobiotics

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    (ole of pero1isomes in β-oxidation

    (ero"isomal fattyacyl*Co synthetase is for

    very long chain fatty acids.e.g he"acoanoic

    acid

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    Pero1isomes

    'ormed by self replication 5 $E!

    2ntracellular digestive system

    %"idize poisonous subs. as alcohol

    Enzymes# %"idases

    %"ygen 7 Hydrogen Hydrogen pero"ide

    Catalases

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    2ell0egir synrome

    )enetic defects causing lack of

    pero"isomes assembly factor*.proteins

    reuired for the formation of pero"isomes+

    ,ill not formed.

    Cause accumulation of very long fatty acid

    chain occur.also defect in bile acid synthesis.

    Neurologoical impairment occur at birth.

    &i t f 2 ll i

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    &ign an symptoms of 2ell0egir

    synrom

    2nfants e"perience muscle ,eakness

    (oor feeding

    Hearing and vision loss $keletal abnormalities

    Donot survive beyond the first year of life.

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    #nosome

    &eans a vesicle that has lost its coat of clathrin+ a protien

    that lines the coated the pits of plasma membrane.

    'our classes of endosome#

    Early Endosome

    !ecycling Endosome

    &ultivesicular 3odies

    Late Endosome

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    #nosome

    &eans a vesicle that has lost its coat of clathrin+ a protien

    that lines the coated the pits of plasma membrane.

    'our classes of endosome#

    Early Endosome

    !ecycling Endosome

    &ultivesicular 3odies

    Late Endosome

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      FG;*LLH ;H2!