What Biodiverse: spatial analysis of diversity using indices WebBiodiverse: a web layer TOLKIN:...

10
Web Biodiverse

description

Why Merging analyses tools Ease of access Ease of use

Transcript of What Biodiverse: spatial analysis of diversity using indices WebBiodiverse: a web layer TOLKIN:...

Page 1: What Biodiverse: spatial analysis of diversity using indices WebBiodiverse: a web layer TOLKIN: systematic and phylogenetic (tree of life) research.

Web Biodiverse

Page 2: What Biodiverse: spatial analysis of diversity using indices WebBiodiverse: a web layer TOLKIN: systematic and phylogenetic (tree of life) research.

What

• Biodiverse: spatial analysis of diversity using indices

• WebBiodiverse: a web layer• TOLKIN: systematic and

phylogenetic (tree of life) research

Page 3: What Biodiverse: spatial analysis of diversity using indices WebBiodiverse: a web layer TOLKIN: systematic and phylogenetic (tree of life) research.

Why

• Merging analyses tools• Ease of access• Ease of use

Page 4: What Biodiverse: spatial analysis of diversity using indices WebBiodiverse: a web layer TOLKIN: systematic and phylogenetic (tree of life) research.

Input

• CSV formatted data file• Set LABELS and GROUPS• Set spatial function• Select analysis methods

Page 5: What Biodiverse: spatial analysis of diversity using indices WebBiodiverse: a web layer TOLKIN: systematic and phylogenetic (tree of life) research.

Output

• 2 visual outputs– Grid– Phylogenetic tree• Circular structure

Page 6: What Biodiverse: spatial analysis of diversity using indices WebBiodiverse: a web layer TOLKIN: systematic and phylogenetic (tree of life) research.

Technology

• Core: Perl• Web Layer:– Backend: Java– Frontend: Javascript– Visual: Vector graphics

Page 7: What Biodiverse: spatial analysis of diversity using indices WebBiodiverse: a web layer TOLKIN: systematic and phylogenetic (tree of life) research.

How it works

• It’s all MAGIC… – Or rather some intelligent coding...

• In reality– Upload CSV data file– Select options• (get coffee?)

– Be awe’d by the visualisation

Page 8: What Biodiverse: spatial analysis of diversity using indices WebBiodiverse: a web layer TOLKIN: systematic and phylogenetic (tree of life) research.

Demo

• Live demo. – fingers crossed

Page 9: What Biodiverse: spatial analysis of diversity using indices WebBiodiverse: a web layer TOLKIN: systematic and phylogenetic (tree of life) research.

Links• Biodiverse

– http://code.google.com/p/biodiverse/• Web Biodiverse

– http://www.biomaps.net.au/WebBiodiverse/• TOLKIN

– http://www.tolkin.org/

Page 10: What Biodiverse: spatial analysis of diversity using indices WebBiodiverse: a web layer TOLKIN: systematic and phylogenetic (tree of life) research.

Questions