Phylogenetic structure and phylogenetic diversity of angiosperm ...
What Biodiverse: spatial analysis of diversity using indices WebBiodiverse: a web layer TOLKIN:...
-
Upload
poppy-adams -
Category
Documents
-
view
215 -
download
0
description
Transcript of What Biodiverse: spatial analysis of diversity using indices WebBiodiverse: a web layer TOLKIN:...
![Page 1: What Biodiverse: spatial analysis of diversity using indices WebBiodiverse: a web layer TOLKIN: systematic and phylogenetic (tree of life) research.](https://reader036.fdocuments.in/reader036/viewer/2022082622/5a4d1b977f8b9ab0599c3fa2/html5/thumbnails/1.jpg)
Web Biodiverse
![Page 2: What Biodiverse: spatial analysis of diversity using indices WebBiodiverse: a web layer TOLKIN: systematic and phylogenetic (tree of life) research.](https://reader036.fdocuments.in/reader036/viewer/2022082622/5a4d1b977f8b9ab0599c3fa2/html5/thumbnails/2.jpg)
What
• Biodiverse: spatial analysis of diversity using indices
• WebBiodiverse: a web layer• TOLKIN: systematic and
phylogenetic (tree of life) research
![Page 3: What Biodiverse: spatial analysis of diversity using indices WebBiodiverse: a web layer TOLKIN: systematic and phylogenetic (tree of life) research.](https://reader036.fdocuments.in/reader036/viewer/2022082622/5a4d1b977f8b9ab0599c3fa2/html5/thumbnails/3.jpg)
Why
• Merging analyses tools• Ease of access• Ease of use
![Page 4: What Biodiverse: spatial analysis of diversity using indices WebBiodiverse: a web layer TOLKIN: systematic and phylogenetic (tree of life) research.](https://reader036.fdocuments.in/reader036/viewer/2022082622/5a4d1b977f8b9ab0599c3fa2/html5/thumbnails/4.jpg)
Input
• CSV formatted data file• Set LABELS and GROUPS• Set spatial function• Select analysis methods
![Page 5: What Biodiverse: spatial analysis of diversity using indices WebBiodiverse: a web layer TOLKIN: systematic and phylogenetic (tree of life) research.](https://reader036.fdocuments.in/reader036/viewer/2022082622/5a4d1b977f8b9ab0599c3fa2/html5/thumbnails/5.jpg)
Output
• 2 visual outputs– Grid– Phylogenetic tree• Circular structure
![Page 6: What Biodiverse: spatial analysis of diversity using indices WebBiodiverse: a web layer TOLKIN: systematic and phylogenetic (tree of life) research.](https://reader036.fdocuments.in/reader036/viewer/2022082622/5a4d1b977f8b9ab0599c3fa2/html5/thumbnails/6.jpg)
Technology
• Core: Perl• Web Layer:– Backend: Java– Frontend: Javascript– Visual: Vector graphics
![Page 7: What Biodiverse: spatial analysis of diversity using indices WebBiodiverse: a web layer TOLKIN: systematic and phylogenetic (tree of life) research.](https://reader036.fdocuments.in/reader036/viewer/2022082622/5a4d1b977f8b9ab0599c3fa2/html5/thumbnails/7.jpg)
How it works
• It’s all MAGIC… – Or rather some intelligent coding...
• In reality– Upload CSV data file– Select options• (get coffee?)
– Be awe’d by the visualisation
![Page 8: What Biodiverse: spatial analysis of diversity using indices WebBiodiverse: a web layer TOLKIN: systematic and phylogenetic (tree of life) research.](https://reader036.fdocuments.in/reader036/viewer/2022082622/5a4d1b977f8b9ab0599c3fa2/html5/thumbnails/8.jpg)
Demo
• Live demo. – fingers crossed
![Page 9: What Biodiverse: spatial analysis of diversity using indices WebBiodiverse: a web layer TOLKIN: systematic and phylogenetic (tree of life) research.](https://reader036.fdocuments.in/reader036/viewer/2022082622/5a4d1b977f8b9ab0599c3fa2/html5/thumbnails/9.jpg)
Links• Biodiverse
– http://code.google.com/p/biodiverse/• Web Biodiverse
– http://www.biomaps.net.au/WebBiodiverse/• TOLKIN
– http://www.tolkin.org/
![Page 10: What Biodiverse: spatial analysis of diversity using indices WebBiodiverse: a web layer TOLKIN: systematic and phylogenetic (tree of life) research.](https://reader036.fdocuments.in/reader036/viewer/2022082622/5a4d1b977f8b9ab0599c3fa2/html5/thumbnails/10.jpg)
Questions