SETD2 and Clear Cell Renal Cell Carcinoma Abby Kepley.
-
Upload
betty-bishop -
Category
Documents
-
view
219 -
download
0
Transcript of SETD2 and Clear Cell Renal Cell Carcinoma Abby Kepley.
SETD2 and Clear Cell Renal Cell Carcinoma
Abby Kepley
SETD2 is a Histone Methyltransferase of H3K36me3
Post-translational modifications of H3K36 are important in regulating DNA
structure and expression throughout the genome
Multiple domains within SETD2 contribute to its enzymatic function
S-adenosylmethionine (SAM)
SETD2/HYPB is required for murine embryonic vascular remodeling
Whole-mount IHC with PECAM-1 antibody
In vitro tube formation assay with siRNA
Clear Cell Renal Cell Carcinoma is the most common form of RCC
• ~75% of renal cell carcinomas are ccRCC
• There are both hereditary and sporadic forms
• 1/3 of patients present with locally advanced or metastatic disease
Tumor suppressors VHL, BAP1, SETD2, and PBRM1 are commonly mutated in
ccRCC
Loss of SETD2 function leads to impaired signaling in the DNA damage response
It also leads to inactivation of p53
The role of SETD2 in homologous repair
Treatment options for ccRCC
• There has yet to be a targeted therapy for histone methyltransferases to reach clinical trials.
• Current Therapies Include:• Local: nephrectomy, EBRT• Cytokine Therapy: interferon-alpha, IL-2• Targeted: Sunitinib, Sorafenib
SourcesPfister, S. X. (2014). SETD2-Dependent Histone H3K36 Trimethylation Is Required for Homologous Recombination Repair and Genome Stability. Cell Reports, 7(6), 2006–2018. doi: http://dx.doi.org/10.1016/j.celrep.2014.05.026
Hu, M. (2010). Histone H3 lysine 36 methyltransferase Hypb/Setd2 is required for embryonic vascular remodeling. PNAS, 107(7), 2956–2961.
Larkin, J. (2012). Epigenetic regulation in RCC: opportunities for therapeutic intervention? Nature Reviews, 9, 147–155. doi: doi:10.1038/nrurol.2011.236
Hakimi, A. (2013). Clinical and Pathologic Impact of Select Chromatin-modulating Tumor Suppressors in Clear Cell Renal Cell Carcinoma. European Urology, 63(5), 848–854. doi:http://dx.doi.org/10.1016/j.eururo.2012.09.005
Carvalho, S. (2014). SETD2 is required for DNA double-strand break repair and activation of the p53- mediated checkpoint. eLIFE, 1–19. doi:10.7554/eLife.02482
National Cancer Institute. (2015). Renal Cell Cancer Treatment (PDQ®). Retrieved from http://www.cancer.gov/cancertopics/pdq/treatment/renalcell/HealthProfessional/page8
Ramnani, D. (2015). Clear Cell Renal Cell Carcinoma. Retrieved from http://www.webpathology.com/image.asp?case=66&n=10
SMART. (2014). PostSET. Retrieved from http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=PostSET
SMART. (2014). SET. Retrieved from http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SET
UniProt Consortium. (2015). Q9BYW2 - SETD2_HUMAN. Retrieved from http://www.uniprot.org/uniprot/Q9BYW2
Fernandes de Almeida, S. (2011). Splicing enhances recruitment of methyltransferase HYPB/Setd2 and methylation of histone H3 Lys36. Nature Structural & Molecular Biology, 18, 977–983. doi:10.1038/nsmb.2123
Wagner, E. (2014). Understanding the language of Lys36 methylation at histone H3. Nat Rev Mol Cell Biol . , 13(2), 1–26. doi:10.1038/nrm3274