Phylogenetic affinities of the enigmatic protist...

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Phylogenetic affinities of the enigmatic protist Nephromyces Developing an integrated approach for phylogenetic analysis of a complex tripartite marine symbiosis ©Mary Beth Saffo 2004

Transcript of Phylogenetic affinities of the enigmatic protist...

Page 1: Phylogenetic affinities of the enigmatic protist Nephromycesucjeps.berkeley.edu/bryolab/...Saffo_Nephromyces.pdf · ©Mary Beth Saffo 2004. Molgula occidentalis ©Mary Beth Saffo

Phylogenetic affinities of the enigmatic protist Nephromyces

Developing an integrated approach for phylogenetic analysis of a complex tripartite marinesymbiosis

©Mary Beth Saffo 2004

Page 2: Phylogenetic affinities of the enigmatic protist Nephromycesucjeps.berkeley.edu/bryolab/...Saffo_Nephromyces.pdf · ©Mary Beth Saffo 2004. Molgula occidentalis ©Mary Beth Saffo

How can phylogenetic studies provide insights into the ecological and physiological dynamics of symbioticinteractions? How can understanding of host-

symbiont dynamics provide insights into the evolutionary history of the host and microbial taxa?

How can Nephromyces enhance understanding of protist phylogeny ?

©Mary Beth Saffo 2004

Page 3: Phylogenetic affinities of the enigmatic protist Nephromycesucjeps.berkeley.edu/bryolab/...Saffo_Nephromyces.pdf · ©Mary Beth Saffo 2004. Molgula occidentalis ©Mary Beth Saffo

Molgula occidentalis

©Mary Beth Saffo 2004

Page 4: Phylogenetic affinities of the enigmatic protist Nephromycesucjeps.berkeley.edu/bryolab/...Saffo_Nephromyces.pdf · ©Mary Beth Saffo 2004. Molgula occidentalis ©Mary Beth Saffo

Molgula manhattensis

©Mary Beth Saffo 2004

Page 5: Phylogenetic affinities of the enigmatic protist Nephromycesucjeps.berkeley.edu/bryolab/...Saffo_Nephromyces.pdf · ©Mary Beth Saffo 2004. Molgula occidentalis ©Mary Beth Saffo

Molgula manhattensis. . . and company

Nephromyces

Molgulid host

bacteria

©Mary Beth Saffo 2004

Page 6: Phylogenetic affinities of the enigmatic protist Nephromycesucjeps.berkeley.edu/bryolab/...Saffo_Nephromyces.pdf · ©Mary Beth Saffo 2004. Molgula occidentalis ©Mary Beth Saffo

“a fungus with no relatives, not even close ones. . .”

Paul Buchner

Nephromyces

Eclectic cells in search of a relative

©Mary Beth Saffo 2004

Page 7: Phylogenetic affinities of the enigmatic protist Nephromycesucjeps.berkeley.edu/bryolab/...Saffo_Nephromyces.pdf · ©Mary Beth Saffo 2004. Molgula occidentalis ©Mary Beth Saffo

A fungal lifestyle:

but is it a fungus?(or even a chytrid?)

©Mary Beth Saffo 2004

Page 8: Phylogenetic affinities of the enigmatic protist Nephromycesucjeps.berkeley.edu/bryolab/...Saffo_Nephromyces.pdf · ©Mary Beth Saffo 2004. Molgula occidentalis ©Mary Beth Saffo

©Mary Beth Saffo 2004

Page 9: Phylogenetic affinities of the enigmatic protist Nephromycesucjeps.berkeley.edu/bryolab/...Saffo_Nephromyces.pdf · ©Mary Beth Saffo 2004. Molgula occidentalis ©Mary Beth Saffo

©Mary Beth Saffo 2004

Page 10: Phylogenetic affinities of the enigmatic protist Nephromycesucjeps.berkeley.edu/bryolab/...Saffo_Nephromyces.pdf · ©Mary Beth Saffo 2004. Molgula occidentalis ©Mary Beth Saffo

ThraustochytriumNephromyces

©Mary Beth Saffo 2004

Page 11: Phylogenetic affinities of the enigmatic protist Nephromycesucjeps.berkeley.edu/bryolab/...Saffo_Nephromyces.pdf · ©Mary Beth Saffo 2004. Molgula occidentalis ©Mary Beth Saffo

reproductive stages

vegetative stages

renal

sac

new host

Nephromyces :life cycle

©Mary Beth Saffo 2004

Page 12: Phylogenetic affinities of the enigmatic protist Nephromycesucjeps.berkeley.edu/bryolab/...Saffo_Nephromyces.pdf · ©Mary Beth Saffo 2004. Molgula occidentalis ©Mary Beth Saffo

ssu rDNA: Nephromyces is anapicomplexan

(preliminary phylogenetic analysis: a sample maximum likelihood tree)

Phylogenetic analyses, still in progress,consistently indicate that Nephromyces is a distinct clade within the Apicomplexa. Although the relationship of Nephromyces to other apicomplexans is not yet definitively resolved,in (unweighted) analyses of ssu rDNA sequences thus far, Nephromyces usually groups withnon-coccidian clades.

©Mary Beth Saffo 2004

Page 13: Phylogenetic affinities of the enigmatic protist Nephromycesucjeps.berkeley.edu/bryolab/...Saffo_Nephromyces.pdf · ©Mary Beth Saffo 2004. Molgula occidentalis ©Mary Beth Saffo

Apicomplexa

•parasites & pathogens• apical complex• apicoplast (remnant algal chloroplast?)

Are these features also found in Nephromyces?

©Mary Beth Saffo 2004

Page 14: Phylogenetic affinities of the enigmatic protist Nephromycesucjeps.berkeley.edu/bryolab/...Saffo_Nephromyces.pdf · ©Mary Beth Saffo 2004. Molgula occidentalis ©Mary Beth Saffo

12 hours: Molgula blood

24 hours: renal sac

©Mary Beth Saffo 2004

Page 15: Phylogenetic affinities of the enigmatic protist Nephromycesucjeps.berkeley.edu/bryolab/...Saffo_Nephromyces.pdf · ©Mary Beth Saffo 2004. Molgula occidentalis ©Mary Beth Saffo

©Mary Beth Saffo 2004

Page 16: Phylogenetic affinities of the enigmatic protist Nephromycesucjeps.berkeley.edu/bryolab/...Saffo_Nephromyces.pdf · ©Mary Beth Saffo 2004. Molgula occidentalis ©Mary Beth Saffo

Vieira et al, Mem. Inst. Oswaldo Cruz (Brazil) 1997

Page 17: Phylogenetic affinities of the enigmatic protist Nephromycesucjeps.berkeley.edu/bryolab/...Saffo_Nephromyces.pdf · ©Mary Beth Saffo 2004. Molgula occidentalis ©Mary Beth Saffo

Inside

Nephromyces

©Mary Beth Saffo 2004

Page 18: Phylogenetic affinities of the enigmatic protist Nephromycesucjeps.berkeley.edu/bryolab/...Saffo_Nephromyces.pdf · ©Mary Beth Saffo 2004. Molgula occidentalis ©Mary Beth Saffo

Symbiotic partners can be highly modified in structure and physiology compared to free-living relatives

Molgulids and Nephromyces are distinctive clades: in what ways might their interdependence have affected their respective evolutionary paths, compared to sister taxa?

©Mary Beth Saffo 2004