Numerical, Binary and Undulatory Hidden CODES that organize DNA, chromosomes and whole genomes

Jean-claude PEREZ

"The numbers are objects in its own right, like the atoms or molecules. Although theirnature differs, they exist independently of the mind that studied them, the brains of

mathematicians creating only the theoretical tools to apprehend the" Jacques de schryver in "Le réincarné" Amazon french ebook 2013 1.

Jean-Claude Perez is a French interdisciplinary 2 researcher 3 . Researcher in ArtificialIntelligence and Robotics at IBM, he was a pioneer of artificial neural networks in the1980s, he published the first two French books on artificial neural networks 4 5.

He primarily explores the emergence of "sub-Artificial Intelligence" such as patternrecognition based on self-organizing properties. Exploiting the findings of the Frenchmathematician Benoit Mandelbrot IBM Yortown Heights Thomas J. Watson basic researchLaboratory (fractals), the Belgian Nobel Prize Ilya Prigogine (order far from equilibrium)and Chilean biologists Humberto Maturana and Francisco Varela (autopoiesis), hediscovers the "Fractal Chaos " network, a real gifted holographic-like memory typeproviding "déjà vu" memory compressing thousands learned images in a small 3x3 FractalChaos neurons cells network.

1 http://www.amazon.fr/Le-R%C3%A9incarn%C3%A9-Jacques-De-Schryver-ebook/dp/B00BUINGFC2 An interdisciplinary researcher : https://fr.scribd.com/doc/72147501/jcperezFINALpapermontevideo and https://fr.scribd.com/doc/70982611/presentacion-completaMonteVIDEOvideoCONFERENCIAjcperezOctubre2011

3Biography : http://creationwiki.org/Jean-claude_Perez4 De nouvelles voies vers l'Intelligence Artificielle : pluri-disciplinarité, auto-organisation et réseaux neuronaux , Masson

Publisher, Paris.ISBN 2-225-81326-4 , 1988. http://livre.fnac.com/a223887/Jean-Claude-Perez-De-Nouvelles-voies-vers-l-intelligence-artificielle 5http://www.amazon.fr/R%C3%A9volution-ordinateurs-neuronaux-Jean-Claude-Perez/dp/2866012038 (e-book : http://www.leslibraires.fr/livre/7604503-la-revolution-des-ordinateurs-neuronaux-techno--perez-hermes-science-publications ).

He discovered a remarkable attractor at the heart of its fractal: point of the famous« golden ratio » and just around a hyper-sensitive region to the proportions of consecutiveFibonacci numbers. 6 .

We are in 1990, Jean-Claude perez then has a famous intuition: "If we were looking for inthe DNA sequences of nucleotides TCAG relative proportions as the proportions ofFibonacci? " (Eg if 89 consecutive nucleotides are divided into 34 T bases and 55 bases A,C, or G, we say that there is here a "resonance" because 34, 55 and 89 are threesuccessive Fibonacci numbers. In a small genome such as the HIV AIDS 9000 nucleotideslong, then we discover thousands of "resonances" the longest of which cover the 2/3 of thegenome ( 6765 bases resonance as Fibonacci sequence = 0, 1, 1, 2, 3, 5, 8, 13, 21, 34,55, 89, 144, 233, 377, 610, 987, 1597, 2584, 4181, 6765, ... / ...). In 1991, jean-ClaudePerez published the first and the oldest scientific article demonstrating the proof of thegolden section and Fibonacci numbers in the DNA sequences and especially in the DNAcoding for genes 7, there is his main article on the « Supracode of DNA ».

In the 25 years that followed, Jean-Claude Perez then abandoned research in Artificial

6 http://ieeexplore.ieee.org/xpl/login.jsp?tp=&arnumber=5726638&url=http%3A%2F

%2Fieeexplore.ieee.org%2Fiel2%2F148%2F3745%2F05726638.pdf%3Farnumber%3D57266387 J.C. Perez, Chaos, DNA and neuro-computers: a golden link. in Speculations in Science and Technology ; Vol. 14, No.

1 (1991): pp. 336-346 ;ISSN 0155-7785 https://www.academia.edu/5093060/1991_Jean-claude_Perez_published_the_first_proof_that_there_are_Fibonacci_structures_within_DNA

Intelligence to devote himself exclusively to research digital structures controlling the DNAof genes, chromosomes, and whole genomes.

Particularly, he publish 2 french books :1997 : « L 'ADN décrypté » (DNA decyphered 8 .2009 : « Codex Biogenesis » 9 .

He also discovered two amazing universal formulas:The predictive formula of the structure of the periodic table of Elements for Mendeleev 10 .

The « Formula for Life » unifying all organic compounds from C O N H isotopes towards whole genomes providing a common meta-language unifying the 3 languages of Life : DNA, RNA and Amino Acids.

8 Perez JC. L'ADN décrypté. Resurgence publisher Liege Belgium . ISBN 2872110178 . http://www.resurgence.be/91-adn-decrypte-9782872110179.html 1997.

9Perez J.C. Codex Biogenesis. Resurgence, Liege Belgium. ISBN 2-87434-044-8. https://sites.google.com/site/codexbiogenesis/ and http://www.ei.ur.edu.uy/JCP_codex.pdf 2009.10 http://golden-ratio-in-dna.blogspot.fr/2008/01/1997-perezs-generic-predictive-equation.html

Then, the main scientific articles published during this period are particularly :

2010 : Perez J.C. Codon Populations in Single-Stranded Whole Human Genome DNA Are Fractal and Fine-Tuned by the Golden Ratio 1.618,. Interdisciplinary Sciences: Computational Life Sciences, Vol. 2, No. 3, 2010, pp. 1-13. http://www.ncbi.nlm.nih.gov/pubmed/20658335http://fr.scribd.com/doc/95641538/Codon-Populations-in-Single-stranded-Whole-Human-Genome-DNA-Are-Fractal-and-Fine-tuned-by-the-Golden-Ratio-1-618 2010.

2011 : Perez J.C. Decoding Non-Coding DNA Codes: Human Genome Meta-Chromosomes Architecture. BIT Life Sciences’ 3rd Annual World Vaccine Congress, Beijing, 23-25 March2011. http://fr.scribd.com/doc/57828784/jcperezBeijing032011 2011.

2012 : Pellionisz A.J., Graham R., Pellionisz P.A. and Perez J.C. Recursive Genome Function of the Cerebellum: Geometric Unification of Neuroscience and Genomics. In: M. Manto, D. L. Et al. Eds., Handbook of the Cerebellum and Cerebellar Disorders, 2012, pp. 1381-1423. https://www.researchgate.net/publication/261402069_Recursive_Genome_Function_of_the_Cerebellum_Geometric_Unification_of_Neuroscience_and_Genomics and http://fr.scribd.com/doc/111439455/BOOK-Unification-of-Neuroscience-and-Genomics-Pellionisz-Et-Al-in-Section-4 2012.

2013 : Perez J.C. The “3 Genomic Numbers” Discovery: How Our Genome Single-Stranded DNA Sequence Is “Self-Designed” as a Numerical Whole. Applied Mathematics, Vol. 4 No. 10B, 2013, pp. 37-53. doi:10.4236/am.2013.410A2004. 2013.

2015 : to be published : « Deciphering hidden DNA meta-codes - The Great Unification & Master Code of Biology ».

Finally in this long research trip, we discovered in various ways the Golden Ratio, Numerical structures, Biobits binary codes, waveforms interferences, and resonances.We have here the proof that DNA is not only Biology but also Field numbers, waves and finally... Mathematics.

More about the Main book « CODEX BIOGENESIS » (2009)

http://www.amazon.fr/product-reviews/2874340448By Jacques de Schryver (Strasbourg, France Al) - See all my reviews(TOP 1000 REVIEWER) (REAL NAME)This review is from: Codex Biogenesis - 13 DNA codes (Paperback)Jean-Claude Perez hypothesized that the redundancy of the genetic code might contain a meaning. Structure of redundancy or hidden meaning? Armed with extensive knowledge in the humanities, Jean-Claude Perez is a talented mathematician who has devoted over twenty years to understand that if life is characterized by the ability to achieve a goal, methodical decoding DNA can reveal several levels of meaning. Codex Genesis is a unique book that deserves a Fields Medal (the Nobel of mathematics) and which also is able to make us dream. The rigorous poetry serving a meaning tolife? This epistemological book might as well be in store shelves philosophy, religion than math. A kind of Sherlock Holmes novel as interesting as the works of Stephen Hawking.

Foreword by Carl Johan Calleman PhD author of "The Purposeful Universe"

There are certain times in history when our world view undergoes fundamental shiftsand the theories that may have previously seemed to be cut in stone are suddenlyquestioned and at the very least considered as inadequate. An obvious such point intime is the scientific revolution in the early 17th century when Galileo and Keplerintroduced a totally new approach to gaining knowledge. Experiments andinstruments were introduced and the first mathematical laws of nature wereformulated resulting in Descartes philosophy of rational empiricism, which meant

that theories had to corroborate the actual observation of nature. The broaderphilosophy underlying this may be said to have been deism, in other words the ideathat the universe was like a clockwork which God had started, never intervened inand so would operate according to the laws of nature until the end of time.

A second significant shift in the scientific world view may be said to have come withthe introduction of the concept of evolution notably through Darwin’s theory. Thiswas not only a reflection of a new notion of time, but also a view of our origins thatexcluded any role of a creative intelligence behind the workings of the universe. Thisatheist approach to science has since then become somewhat of a dogma and hasprofoundly influenced the kind of questions that scientists have been asking. Whilethe good side of this may be that much religious bias have been removed fromscience, the negative aspect is that it has excluded holistic approaches to it that wouldexplain how everything in nature is connected. Thus, only if you accept that there is aunified plan behind the existence of the universe do you have any reason to considera holistic approach.

I want to encourage the reader to consider the possibility that the work of Jean-Claude Perez belongs to a new and fundamentally different paradigm of science, onethat uses the established methods of rational empiricism to elucidate significantrelationships, but does not reject the possibility that our universe has an intelligentorigin. This, I believe, is the kind of science that is at its forefront in our ownparticular time. Fascinating in this respect is Dr Perez re-contextualization ofMendeleïev’s periodic system of the elements, a typical example of how a theoryattains a new meaning even though its previous formulation had been perceived ascut in stone. Hence, Perez work entices us to explore intelligent causes underlying therelationships of nature without putting in question the empirical facts that have beengathered about it.

Fascinating are also Dr Perez studies of the presence of the so-called Golden Ratio inthe nucleic acids. The Golden Ratio and its associated Fibonacci numbers have beenknown to play a role in the geometry of nature for at least 800 years, but what isfundamentally new in Perez treatise is that he studies the information content of theDNA in light of the Golden Ratio rather than merely its geometry. This leads us tovarious relationships pointing to an order behind the emergence of the biologicalorganisms the study of which may now only have started. A fundamental conclusionthat can be drawn from the relationships that Dr Perez has discovered is that the DNAsequences of all organisms must have emerged, or have been created, as a whole.They have in other words not emerged through random chemical reactions. I believeDr Perez has here discovered something that simply cannot be accommodated by theprevious scientific paradigm that looks upon biological evolution as a whim ofnature. This discovery alone has so wide-ranging ramifications for all of biology, andespecially molecular biology, that it should prompt researchers either to refute hisclaims or to widen the framework of their own analysis.

It is through this holism that it becomes clear that Dr Perez’ work is part of a newscientific revolution, one that brings us back to a meaningful view of the universe,which has a source that we may call “intelligent”. While much of his work requiresquite a degree of specialized knowledge to understand these conclusions bythemselves are important enough to deserve the attention of the entire scientificcommunity, as well as the broadly interested public. In a sense Dr Perez work thusmeans a return to a science, which acknowledges as meaningful some of thenumerological relationships that were typical of many ancient peoples of our planet.Yet, this return to seeing a higher meaning and purpose of nature here takes place at anew level where the methodology and mathematical means of analysis of science arerecognized as necessary for the new quest. Ultimately, any understanding of a higherpurpose of the universe will have to rely on such reality checks and it is only if itdoes so that there will be a true value of this new wave of science in helping usunderstand what it means to be a human being.

Seattle, August 22, 2009Carl Johan Calleman, Ph.D.

Carl Johan Calleman holds a Ph.D. in physical biology from the University of Stockholm. He has been a seniorresearcher at the University of Washington and has served as a cancer expert for the World Health Organization. He isalso a leading expert on the Mayan Calendar and is the author of The Mayan Calendar and the Transformation of

Consciousness and The Mayan Calendar. He lives in Seattle.In 2009, he will publish “The Purposeful Universe HowQuantum Theory and Mayan Cosmology Explain the Origin and Evolution of Life”, Bear & Company USA (December 15, 2009– ISBN-10 : 1591431042 ISBN-13: 978-1591431046).