Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense...

61
x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding population

Transcript of Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense...

Page 1: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

x

Wild perennial sorghumSorghum halapense

Annual

grain

sorghum

Inter-species hybrid

Perennial

grain

sorghum

Highly

diverse

breeding

population

Page 2: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

BULK06-10

160 cm

Page 3: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding
Page 4: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

perennial

legumes

1. The Land Institute is

domesticating Illinois

bundleflower (IBF)

– Adapted to Great Plains

conditions

– Nitrogen fixation and seed

protein content similar to

soybean

Page 5: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding
Page 6: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding
Page 7: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding
Page 8: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

Indehiscent

Dehiscent

Page 9: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

Pod dropping score (0=marcescent, 2=highly deciduous)

2008 families: 0 0.5 1 2

Indehiscent families 11 13 36 48

Dehiscent families 18 2 2 1

Page 10: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

Pod dropping score (0=marcescent, 2=highly deciduous)

2008 families: 0 0.5 1 2

Indehiscent families 11 13 36 48

Dehiscent families 18 2 2 1

Page 11: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

2. Existing forage legumes as

nitrogen source for perennial cereals

Page 12: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding
Page 13: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

Mowed legume intercrop

Late spring:

Mow between each row of

cereal

Multi-row mower tractor attachment

Early summer:

Mowing triggers legume to

drop fine roots; nitrogen from

decomposing roots and

leaves is taken up by the

cereal crop

Page 14: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

3. Existing perennial grain legumes

– but usually grown as annuals

• pigeonpea

• lab-lab

• runner bean

• Lima bean

Page 15: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

Pigeon Pea

•Deeply-rooted,

perennial

•4.92 million hectares

worldwide (3.58 million

in India alone)

•Average yield 898 kg/ha

Page 16: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

―The pigeonpea plants, especially of the perennial varieties, have a strong root system, which helps hold the soil on sloping hillsides. ―

―’Pigeonpea has been found to be very successful in covering the soil and reducing soil erosion," says Dr Zong Xuxiao, from the Chinese Academy of Agricultural Sciences at Beijing.’‖

http://www.cgiar.org/newsroom/releases/news.asp?idnews=536

Page 18: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

Runner bean (Phaseolus coccineus)

Page 20: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

http://www.spiralmonkey.com/nepal/nepal.0084.jpg

IBF: seed yields of 3000 kg/ha on mine

spoils in Florida!

Protecting fragile landscapes,

reclaim degraded farmland

In Haiti alone,15,000 acres are

―abandoned to erosion‖ each

year (Paskett and Philoctete,

1990)

Perennials:

•No tillage: protect steep

slopes

•Perform well despite

crusted, degraded soil

•Deep taproots access

moisture in droughts

Page 22: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

Perennial Oilseed Grains

Sunflower family (Asteraceae)

Page 23: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

many heads, small seeds, many seeds per head

many heads, large seeds, few seeds per head

Helianthus annuusHelianthus

maximiliani

:

Silphium

integrifolium:

modern

domestic

cultivar

wild accession (Kansas)

Page 24: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

Strategies for perennial sunflower

Domestication Interspecific

Wild perennial

species in Asteraceae

A B C

Moderate

yield

High

yield

No shatter-

resistance

found

Small seed,

shattering

Large seed,

non-shattering

University of Minnesota The Land Institute

Annual crop

sunflower (2x)

Perennial wild

sunflower (6x)

F1 mostly

perennial (4x)

X

BC1

Annual

crop

sunflower

(4x)

X

X

Annuals & perennials

Backcross breeding to give

a tuberous Helianthus

annuus (4x)

X

X

X

(nearly)

random mating

to create a

diverse 4x

population

Cycles of

selection for

seed size and

seed yield

Page 25: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

Variation in plant form in recurrent selection populations of

Kansas rosinseed

Perennial sunflower domestication program:

Page 26: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding
Page 27: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

1 m

ete

rDomestication:

Helianthus maximilianii

(Maximilian sunflower)

Growing in natural

grassland ecosystemGrowing in research plots

Page 28: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

Perennial sunflower domestication program:

Recurrent phenotypic selection of H. maximiliani for various agronomic traits.

Page 29: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

Trait “Heritability”

Lodging score 0.39

Yield per area 0.32

Yield per stalk 0.51

Seed weight 0.46

Shattering 0.56

Plant Height 0.61

Maximilian sunflower

Page 30: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

Seed size

Seeds/head

Yield per head

Yield per stalk

Yield per plant

Stalk diameter

Shatter resistance (2)

Shatter resistance (3)

Stalk density

Head clustering

Plant dwarfing

Foliar disease (2008)

Foliar disease (2007)

Index

8

1838

2108

Average of the ―top 50‖ genotypes

chosen for combined scores for

seed size, yield, etc. Overall these

are better than the population

mean, but never the best for any

one trait.

Page 31: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

Seed size

Seeds/head

Yield per head

Yield per stalk

Yield per plant

Stalk diameter

Shatter resistance (2)

Shatter resistance (3)

Stalk density

Head clustering

Plant dwarfing

Foliar disease (2008)

Foliar disease (2007)

Index

8

1838

2108

1104

This genotype had reduced

shattering but also small heads—

would not have been included in

the ―top 50‖

-- -

++

Page 32: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

Seed size

Seeds/head

Yield per head

Yield per stalk

Yield per plant

Stalk diameter

Shatter resistance (2)

Shatter resistance (3)

Stalk density

Head clustering

Plant dwarfing

Foliar disease (2008)

Foliar disease (2007)

Index

8

1838

2108

1104

This genotype had huge seeds

but higher-than-average

shattering.

+

-

-

-

Page 33: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

•head size

•ligule number

•branching pattern

•leaf size/shape

Variation among the half-sib progeny of a single unusually apically dominant plant

Perennial sunflower domestication program:

Page 34: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

Normal, branched formUnbranched

type

Page 35: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

No-branching types

Page 36: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding
Page 37: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding
Page 38: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding
Page 39: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

???

No heads!

= extreme

apical dominance?

Page 40: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding
Page 41: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

Hexaploid perennials

--H. tuberosus

--H. rigidus

Diploid perennials

--H. maximiliani

--H. salicifolius

--H. grosseserratus

--H. giganteus

Diploid Annuals

--H. annuus (wild)

--H. annuus (crop)

--H. petiolaris

Tetraploid Breeding Population (68 chromosome)

containing genes from many species

X X Pollen: 17

chromosomes

Pollen: 17

chromosomes

Eggs: 51

chromosomesEggs: 51

chromosomes

Page 42: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

2009 Sunflower populations

Page 43: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

2009 Sunflower populations

Page 44: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

Variation in head size between half-sib progeny of a cross between H. annuus and H. tuberosus.

Interspecific perennial sunflower program:

Page 45: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

Greatest age of any plant structure (years)

0.11 10 100 1000

Ave

rag

e a

nn

ua

l se

ed

yie

ld (

kg

/ha

)

Long-lived trees

Shrubs, short-lived trees

Herbaceous

perennials

Annuals

Page 46: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

Greatest age of any plant structure (years)

0.11 10 100 1000

Ave

rag

e a

nn

ua

l se

ed

yie

ld (

kg

/ha

)

Long-lived trees

Shrubs, short-lived treesHerbaceous

perennialsAnnuals

?

Page 47: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

Greatest age of any plant structure (years)

0.11 10 100 1000

An

nu

al re

pro

du

ctive

effo

rt

Long-lived trees

Shrubs, short-lived trees

Herbaceous

perennials

Annuals

Stems, leaves (herbivory, frost, fire)

Roots, rhizomes

(drought, tillage, flooding)

structures frequently

lost due to ecological

disturbance:

Page 48: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

Greatest age of any plant structure (years)

0.11 10 100 1000

Long-lived trees

Shrubs, short-lived trees

Herbaceous

perennials

Annuals

Stems, leaves (herbivory, frost, fire)

Roots, rhizomes

(drought, tillage, flooding)

Competition for light:

invest in trunks

Competition for water, nitrogen, space:

Invest in roots, rhizomes

Competition to colonize:

Invest in seeds

Strongest

Competition:

An

nu

al re

pro

du

ctive

effo

rt

Page 49: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

Greatest age of any plant structure (years)

0.11 10 100 1000

Long-lived trees

Shrubs, short-lived trees

Herbaceous

perennials

Annuals

Stems, leaves (herbivory, frost, fire)

Roots, rhizomes

(drought, tillage, flooding)

Competition for light:

invest in trunks

Competition for water, nitrogen, space:

Invest in roots, rhizomes

Competition to colonize:

Invest in seeds

Few losses:

ability to invest in dispersal

(seeds, fruits), once established.

An

nu

al re

pro

du

ctive

effo

rt

Page 50: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

Greatest age of any plant structure (years)

0.11 10 100 1000

Annual grains

An

nu

al re

pro

du

ctive

effo

rt

Page 51: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

Greatest age of any plant structure (years)

0.11 10 100 1000

Annual grains

Nuts,

fruits

An

nu

al re

pro

du

ctive

effo

rt

Page 52: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

Crop Product Dry matter

yielda

(kg ha-1)

Annual net

reproductive

effortb

Basis of

reproduct

ive effort

Source and

location

Malus x domestica

(apple)

Fruit (diaspore) 13,000 to

17,000

0.65 Mass Palmer (1988),

New Zealand

Elaeis guineensis (oil

palm)

Fruit plus seed 5000 to 9000 0.34

0.52

Mass

Energy

Corley (1983),

Malaysia

Cocos nucifera

(coconut palm)

Copra (seed

endosperm)

3000 to 6000 0.20

0.31

Mass

Energy

Corley (1983),

Malaysia

Elaeis guineensis Oil (kernel &

mesocarp)

Bunches (fruit &

peduncles)

6800

16,800

0.32

0.55

Energy

Energy

Wahid et al. (2004),

Malaysia

Olea europaea (olive) Fruit (whole,

with seed)

4600 0.54 Mass Villalobos et al.

(2006), Spain

Musa spp., genomes

AAB (plantain)

Fruit (whole,

seedless)

- 0.60 Mass Baiyeri (2002),

Nigeria

Vaccinium

corymbosum

(highbush blueberry)

Fruit (whole fruit

& seed)

- 0.55 Mass Pritts and Hancock

(1985), United

States

Page 53: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

Greatest age of any plant structure (years)

0.11 10 100 1000

Annual grains

Nuts,

fruits

?

An

nu

al re

pro

du

ctive

effo

rt

Page 54: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

Reference Common names Part harvested Species

Baileyb beet root Beta vulgaris

pigeon pea, red gram seed Cajanus cajan

hyacinth bean, lablab seed Dolichos lablab

sweet potato tuberous roots Ipomoea Batatas

tomato fruit Lycopersicon lycopersicum

cassava, manioc,

tapioca, yucca

tuberous root Manihot esculenta

runner bean seed Phaseolus coccineus

lima bean seed Phaseolus lunatus

castor-bean seed Ricinus communis

potato tuber Solanum tuberosum

Ploschuk, 2005 bladderpod seed Lesquerella fendleri

Smartt, 1990 chickling pea, khesari

dhal

seed Lathyrus sativus

goa bean seed, roots, fruit Psophocarpus

tetragonolobus

Page 55: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

Greatest age of any plant structure (years)

0.11 10 100 1000

Annual grains Nuts,

fruits

An

nu

al re

pro

du

ctive

effo

rt

Page 56: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

Bohrer (1972) Poland Glyceria fluitans

Mongolia Elymus giganteus

Arundo villosa

Bye (1985) Southwestern N.

America

Festuca octoflora

Distichlis palmeri

Doebley (1984)a Southwestern N.

America

Oryzopsis hymenoides b

O. miliacea

Sporobolus spp.

Eragrostis oxylepis

Glyceria spp.

Poa spp.

Elymus canadensis

Melica imperfecta

Stipa speciosa

Muhlenbergia asperifolia

Powers (1874) California Bromus carinatus

Chamberlin (1911) California B. marginatus

DeWet (1992) Chile B. mangoc

Vaughn et al. (2008) China Oryza rufipogond

Guo et al. (2007) China Zizania latifolia

Griffin and Rowlett

(1981)

Scandinavia Leymus arenarius

Weiss et al. (2004) Israel Puccinellia distans

Alopecurus arundinaceus

Bar-Yosef and Kislev

(1989)

Israel Elymus panormitanus

Secale montanum

Piperno et al. (2004) Israel Piptatherum holciforme

Puccinellia gigantea

Hordeum bulbosum

Willcox et al. (2007) Syria H. bulbosum

Hillman et al. (2001) Syria Stipa spp.

Harlan (1989) North Africa Aristida pungens

Panicum turgidum

West Africa Latipes senegalensis

Oryza longistaminata

Paspalum scrobiculatum

Smith (2006) India P. scrobiculatum

Coix lachrymale

Hillman et al. (1989) Southwest

Asia

S. montanumf

Perennial grasses harvested for grain

Page 57: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

Greatest age of any plant structure (years)

0.11 10 100 1000

Annual grains Nuts,

fruits

Perennial root

and tuber crops

(potato, cassava,

yam, etc.)

An

nu

al re

pro

du

ctive

effo

rt

Page 58: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

Greatest age of any plant structure (years)

0.11 10 100 1000

Annual grains Nuts,

fruits

Perennial root

and tuber crops

(potato, cassava,

yam, etc.)

An

nu

al re

pro

du

ctive

effo

rt

Asexual

propagation

(cuttings,

tubers,

grafts)

Page 59: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding

Greatest age of any plant structure (years)

0.11 10 100 1000

Annual

grains Nuts,

fruits

Perennial

grains

An

nu

al re

pro

du

ctive

effo

rt

Page 60: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding
Page 61: Inter-species hybrid x - Charles Sturt University...x Wild perennial sorghum Sorghum halapense Annual grain sorghum Inter-species hybrid Perennial grain sorghum Highly diverse breeding