GEPAS Gene Expression Pattern Analysis Suite Ka-Lok Ng Dept. of Bioinformatics Asia University.
9
GEPAS Gene Expression Pattern Analysis Suite Ka-Lok Ng Dept. of Bioinformatics Asia University
-
date post
21-Dec-2015 -
Category
Documents
-
view
216 -
download
3
Transcript of GEPAS Gene Expression Pattern Analysis Suite Ka-Lok Ng Dept. of Bioinformatics Asia University.
• Prepare a text file with tab delimiter
• Line starts with ‘#’ denotes comment
• http://gepas.bioinfo.cipf.es/
• Tools clustering choose SOTA upload the text file decide the threshold, i.e. 80% RUN
• To view the tree click ‘send to SotaTree’ default parameters RUN
Diauxic data
• http://gepas3.bioinfo.cipf.es/cgi-bin/sets/diauxic
Diauxic data
• Tools clustering choose SOTA upload the text file decide the threshold, i.e. 90% RUN
• To view the tree click ‘send to SotaTree’ default parameters RUN
Click on the cluster 6, it has 108 elements