Flow Cytometry Multiplexing Used to Analyze Metabolic ...€¦ · Jurkat (T lymphocyte cell type)...

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0.01 0.1 1 10 100 0 50 100 150 Amsacrine #110 (Fixable Live Dead Aqua) Amsacrine (μM) Normalized MFI 0.01 0.1 1 10 100 0 50 100 150 Benzyl Isothiocyanate #101 (Fixable Live Dead Aqua) BENZYL ISOTHIOCYANATE (μM) Normalized MFI 0.01 0.1 1 10 100 0 50 100 150 Benzyl Isothiocyanate #101 (Presto Blue) Benzyl Isothiocyanate (μM) Normalized RFU 0.01 0.1 1 10 100 0 50 100 150 Gambogic Acid Amide #7 (Fixable Live Dead Aqua) Gambogic Acid Amide (μM) Normalized MFI 0.01 0.1 1 10 100 0 50 100 150 Gambogic Acid Amide #7 (Presto Blue) Gambogic Acid Amide (μM) Normalized RFU 0.01 0.1 1 10 100 0 50 100 150 Gambogic Acid #2 (Fixable Live Dead Aqua) Gambogic Acid (μM) Normalized MFI 0.01 0.1 1 10 100 0 50 100 150 Gambogic Acid #2 (Presto Blue) Gambogic Acid (μM) Normalized RFU Leticia Montoya, Michelle Yan, Dan Beacham, Michael OGrady, Marcy Wickett, April Anderson, Carolyn DeMarco, and Veronica Calderon Thermo Fisher Scientific, Willow Creek, Eugene, OR, USA, 97402 Screening Amsacrine (known chemotherapeutic for Leukemia) is a more potent drug for Jurkat cells than Ramos cells. ABSTRACT High throughput screening (HTS) is an extremely effective method for allowing researchers to identify putative active compounds for therapeutics. Recently, flow cytometry has emerged as a powerful HTS tool with the added benefit of cell-by-cell analysis. Flow cytometry allows a researcher to study protein-protein interactions, metabolic activities, as well as DNA content in a single or multiplexed assay format. For this study, we screened the MicroSource Discovery System Killer Plates compound library and compared HTS using a plate reader with a flow cytometry live/dead assay. Jurkat (T lymphocyte cell type) and Ramos (B lymphocyte cell type) cells were used as cell models. Cells were cultured under standard conditions and either at hypoxic (1% using a Heracell™ VIOS 160i incubator) or hyperoxic (19%) oxygen levels. We also varied length of time the cells were treated with compound library (24, 48, or 72 hrs.). Membrane integrity and metabolic activity were measured as an output for evaluating cellular viability. To further assess cellular activity, post-screening analysis was implemented to establish EC50s of hitsfrom compound library. Screening analysis identified target drugs that were further analyzed using cell health readouts with different concentrations of hitsto assess compound toxicity. Results indicate that compound hitsand potency differed in the screen depending on cell type, the mechanistic readout, and mode of readout used to perform the HTS experiments. INTRODUCTION High-throughput screening has become the industry standard for pharmaceutical drug screening and drug analysis. The ideal tool for investigating drug functions on cells is flow cytometry. Within this study we compared an acoustic flow cytometry platform with a fluorescent plate reader platform, and analyzed cell viability with different mechanisms of read-out. In combination with the different platforms used, we investigated the difference in oxygen levels and compound potency. The selection of promising compound leads is often poorly characterized due to the oxygen level difference in clusters of abnormal cell types within the human body. Jurkat (T lymphocyte cell type) and Ramos (B lymphocyte cell type) cells were used to study the affect of drugs on different types of white blood cells. White blood cells protect the body against foreign intruders; using these cells allows us to evaluate the effect of drugs tested and their involvement in cell-mediated immunity (T cells) and humoral immunity (B cells). Methods/Analysis At 24, 48, and 72 hours post compound treatment cells were treated with either LIVE/DEAD TM Fixable Aqua Dead Cell Stain for 40 minutes or PrestoBlue TM Cell Viability Reagent for 30 minutes and analyzed on either the Attune TM NxT flow cytometer or the Varioskan TM Flash. CONCLUSIONS Analysis of cell health by screening can benefit from a multi-parametric approach, including different mechanistic and platform readouts. Flow cytometry and the use of multi-well plate auto samplers is an excellent tool for high throughput screening, and should be considered as a viable option for primary, secondary or tertiary compound screening. Oxygen concentrations need to be considered when performing screens and determining compound potency. Flow Cytometry Multiplexing Used to Analyze Metabolic Activity and Assess Pharmaceutical Compound Toxicity as A High Throughput Screening Tool Thermo Fisher Scientific • 5791 Van Allen Way • Carlsbad, CA 92008 • www.lifetechnologies.com Figure 1. Screening of Ramos and Jurkat Cells Using PrestoBlue Cell Viability Reagent as the Read-out. Figure 2. Screening of Ramos and Jurkat Cells Using LIVE/DEAD Fixable Aqua Dead Cell Stain as the Read-out. Figure 7. Flow Analysis of Ramos cells Treated with Amsacrine Flow Analysis Cherry Picking Figure 3. Jurkat and Ramos Cells React Differently to the Same Drug 0.01 0.1 1 10 100 0 50 100 150 Clofazimine #175 (Fixable Live Dead Aqua) Clofazimine (μM) Normalized MFI 0.01 0.1 1 10 100 0 50 100 150 Amsacrine #110 (Presto Blue) Amsacrine (μM) Normalized RFU Figure 5. Similar Drugs Have Different Effects on Cell Type Gambogic Acid (natural product from Garcinia hanburyi shown to activate caspases and have anti- cancer activity) is a more potent drug than the amide version of same compound. Figure 6. Mechanistic Read-outs Give Two Different results Clofazimine (antibiotic used in multi-drug therapy for leprosy) is a more potent drug at 19% Oxygen for both Jurkat and Ramos cells when analyzed using cellular reduction potential as a cell health readout. Figure 4. Oxygen Levels have an Effect on Drug Potency Analyzing the redox potential of a cell gave a difference in compound potency compared to analyzing for membrane integrity. Cells plated at 40,000 cells per well, then treated with 10 μM of each drug from the Killer Collection from MicroSource Discovery Systems, Inc., and stored at either 19% Oxygen or 1% Oxygen in 5% CO 2 and at 37 ºC for 24, 48, and 72 hours. At for 24, 48, and 72 hours cells were treated with either LIVE/DEAD Fixable Aqua Dead Cell Stain or PrestoBlue Cell Viability Reagent and analyzed on either the Attune NxT or the Varioskan Flash. LIVE/DEAD Fixable Aqua Dead Cell Stain Used to evaluate cell viability by flow cytometry. Cell viability was determined by the mean fluorescent intensity (MFI) of total cell population. Reactive dye permeates compromised cell membranes and reacts with free amines on the cell surface and the interior on the cell (Cell Membrane Integrity Read-out). ~Z= 0.8 PrestoBlue Cell Viability Reagent Used to measure cytotoxicity and the proliferation of cells by a spectrometer. Cell viability was determined by measuring the mean fluorescent intensity of total cells per well and obtaining the relative fluorescent units (RFU) per well. Resazurin (PrestoBlue reagent) is reduced by the environment of living cells (Metabolic Read-out). ~Z= 0.7 Attune NxT Flow Cytometer Designed to use acoustic-assisted hydrodynamic focusing, allowing for fast sample throughput rates. Varioskan Flash Spectral scanning reader for fluorescence, absorbance, time resolved fluorescence, and luminescence. High fluorescence Low fluorescence 0.1 1 10 100 0 50 100 150 Clofazimine #175 (Presto Blue) Clofazimine (μM) Normalized RFU Jurkat O 2 19% Jurkat O 2 1% Ramos O 2 19% Ramos O2 1% Three distinct populations are seen with flow cytometry; live, dead, and unhealthy cells. Further analysis with a different readout method(s) are planned for the near future. 60 μM Amsacrine 0 μM Amsacrine 19 μM Amsacrine Jurkat O 2 19% Jurkat O 2 1% Ramos O 2 19% Ramos O2 1% Jurkat O 2 19% Jurkat O 2 1% Ramos O 2 19% Ramos O2 1% Jurkat O 2 19% Jurkat O 2 1% Ramos O 2 19% Ramos O2 1% Jurkat O 2 19% Jurkat O 2 1% Ramos O 2 19% Ramos O2 1% P3643 For Research Use Only. Not for use in diagnostic procedures Live Dead 19% 1% 19% 1% Amsacrine Cell Type 19% Oxygen 1% Oxygen 19% Oxygen 1% Oxygen Jurkat ~ 0.57 μM 0.26 μM 4.96 μM 6.60 μM Ramos ~ 23.30 μM ~ 20.17 μM ~ 71.57 μM ~ 64.95 μM PrestoBlue Cell Viability Reagent LIVE/DEAD Fixable Aqua Dead Cell Stain IC50 Drug Dose Response Table Clofazimine Cell Type 19% Oxygen 1% Oxygen 19% Oxygen 1% Oxygen Jurkat 10.69 μM ~ 30.86 μM NA NA Ramos 4.77 μM ~ 9.21 μM NA NA PrestoBlue Cell Viability Reagent LIVE/DEAD Fixable Aqua Dead Cell Stain IC50 Drug Dose Response Table Gambogic Acid Amide Cell Type 19% Oxygen 1% Oxygen 19% Oxygen 1% Oxygen Jurkat 0.60 μM 0.58 μM 2.50 μM 2.78 μM Ramos 0.19 μM 0.19 μM 1.01 μM 2.25 μM PrestoBlue Cell Viability Reagent LIVE/DEAD Fixable Aqua Dead Cell Stain IC50 Drug Dose Response Table Gambogic Acid Cell Type 19% Oxygen 1% Oxygen 19% Oxygen 1% Oxygen Jurkat 0.60 μM 0.58 μM ~ 0.57 μM ~ 0.53 μM Ramos 0.19 μM 0.19 μM ~ 0.30 μM ~ 0.33 μM IC50 Drug Dose Response Table LIVE/DEAD Fixable Aqua Dead Cell Stain PrestoBlue Cell Viability Reagent Benzyl Isothiocyanate Cell Type 19% Oxygen 1% Oxygen 19% Oxygen 1% Oxygen Jurkat 1.48 μM 1.06 μM NA NA Ramos 1.50 μM ~2.63 μM NA NA IC50 Drug Dose Response Table PrestoBlue Cell Viability Reagent LIVE/DEAD Fixable Aqua Dead Cell Stain © 2016 Thermo Fisher Scientific Inc. All rights reserved. All Thermo Fisher Scientific and its subsidiaries unless otherwise specified Thermo Fisher Scientific • 5791 Van Allen Way • Carlsbad, CA 92008 • www.lifetechnologies.com 0 24 48 72 96 120 144 168 192 10 100 Jurkat 24 hours Fixable Live Dead Aqua Sample # % Dead Cells 2. 7. 101. 110. 175. 2. 7. 101. 110. 175. 0 24 48 72 96 120 144 168 192 1 10 100 Ramos 24 hours Fixable Live Dead Aqua Sample # % Dead Cells 2. 7. 101. 110. 175. 2. 7. 101. 110. 175. 0 24 48 72 96 120 144 168 192 1 10 100 Jurkat 24 hours PrestoBlue Sample # RFU 2. 7. 101. 110. 175. 2. 7. 101. 110. 175. 0 24 48 72 96 120 144 168 192 1 10 100 Ramos 24 hours PrestoBlue Sample # RFU 2. 7. 101. 110. 175. 2. 7. 101. 110. 175. MATERIALS AND METHODS

Transcript of Flow Cytometry Multiplexing Used to Analyze Metabolic ...€¦ · Jurkat (T lymphocyte cell type)...

Page 1: Flow Cytometry Multiplexing Used to Analyze Metabolic ...€¦ · Jurkat (T lymphocyte cell type) and Ramos (B lymphocyte cell type) cells were used as cell models. Cells were cultured

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Leticia Montoya, Michelle Yan, Dan Beacham, Michael O’Grady, Marcy Wickett, April Anderson, Carolyn DeMarco, and Veronica Calderon Thermo Fisher Scientific, Willow Creek, Eugene, OR, USA, 97402

Screening

Amsacrine (known chemotherapeutic for

Leukemia) is a more potent drug for Jurkat

cells than Ramos cells.

Cherry Picking – Cells were treated with select drugs and stored at either 19% Oxygen or 1%

Oxygen in 5% CO2 and at 37 ºC for 24, 48, and 72 hours.

ABSTRACT

High throughput screening (HTS) is an extremely effective method for allowing

researchers to identify putative active compounds for therapeutics. Recently, flow

cytometry has emerged as a powerful HTS tool with the added benefit of cell-by-cell

analysis. Flow cytometry allows a researcher to study protein-protein interactions,

metabolic activities, as well as DNA content in a single or multiplexed assay format. For

this study, we screened the MicroSource Discovery System Killer Plates compound library

and compared HTS using a plate reader with a flow cytometry live/dead assay.

Jurkat (T lymphocyte cell type) and Ramos (B lymphocyte cell type) cells were used as

cell models. Cells were cultured under standard conditions and either at hypoxic (1%

using a Heracell™ VIOS 160i incubator) or hyperoxic (19%) oxygen levels. We also

varied length of time the cells were treated with compound library (24, 48, or 72 hrs.).

Membrane integrity and metabolic activity were measured as an output for evaluating

cellular viability. To further assess cellular activity, post-screening analysis was

implemented to establish EC50s of “hits” from compound library.

Screening analysis identified target drugs that were further analyzed using cell health

readouts with different concentrations of “hits” to assess compound toxicity. Results

indicate that compound “hits” and potency differed in the screen depending on cell type,

the mechanistic readout, and mode of readout used to perform the HTS experiments.

INTRODUCTION

High-throughput screening has become the industry standard for pharmaceutical drug

screening and drug analysis. The ideal tool for investigating drug functions on cells is flow

cytometry. Within this study we compared an acoustic flow cytometry platform with a

fluorescent plate reader platform, and analyzed cell viability with different mechanisms of

read-out. In combination with the different platforms used, we investigated the difference

in oxygen levels and compound potency. The selection of promising compound leads is

often poorly characterized due to the oxygen level difference in clusters of abnormal cell

types within the human body.

Jurkat (T lymphocyte cell type) and Ramos (B lymphocyte cell type) cells were used to

study the affect of drugs on different types of white blood cells. White blood cells protect

the body against foreign intruders; using these cells allows us to evaluate the effect of

drugs tested and their involvement in cell-mediated immunity (T cells) and humoral

immunity (B cells).

Methods/Analysis – At 24, 48, and 72 hours post compound treatment cells were

treated with either LIVE/DEADTM Fixable Aqua Dead Cell Stain for 40 minutes or

PrestoBlueTM Cell Viability Reagent for 30 minutes and analyzed on either the AttuneTM

NxT flow cytometer or the VarioskanTM Flash.

CONCLUSIONS

Analysis of cell health by screening can benefit from a multi-parametric approach,

including different mechanistic and platform readouts.

Flow cytometry and the use of multi-well plate auto samplers is an excellent tool for high

throughput screening, and should be considered as a viable option for primary, secondary

or tertiary compound screening.

Oxygen concentrations need to be considered when performing screens and determining

compound potency.

Flow Cytometry Multiplexing Used to Analyze Metabolic Activity and

Assess Pharmaceutical Compound Toxicity as A High Throughput

Screening Tool

Thermo Fisher Scientific • 5791 Van Allen Way • Carlsbad, CA 92008 • www.lifetechnologies.com

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7 3 .7 4 .

7 5 .7 6 .

7 7 .7 8 .

7 9 .8 0 .

8 1 .

8 2 .

8 3 .

8 4 .

8 5 .

8 6 .

8 7 .

8 8 .

8 9 .

9 0 .9 1 .

9 2 .

9 3 .

9 4 .

9 5 .

9 6 .

9 7 .

9 8 .

9 9 .1 0 0 .

1 0 1 .

1 0 2 .

1 0 3 .

1 0 4 .

1 0 5 .

1 0 6 .

1 0 7 .

1 0 8 .

1 0 9 .

1 1 0 .

1 1 1 .1 1 2 .

1 1 3 .

1 1 4 .

1 1 5 .

1 1 6 .1 1 7 .

1 1 8 .

1 1 9 .

1 2 0 .

1 2 1 .1 2 2 .

1 2 3 .

1 2 4 .

1 2 5 .1 2 6 .

1 2 7 .

1 2 8 .

1 2 9 .1 3 0 .1 3 1 .

1 3 2 .

1 3 3 .1 3 4 .

1 3 5 .

1 3 6 .

1 3 7 .

1 3 8 .1 3 9 .

1 4 0 .

1 4 1 .

1 4 2 .

1 4 3 .

1 4 4 .

1 4 5 .

1 4 6 .

1 4 7 .

1 4 8 .

1 4 9 .

1 5 0 .

1 5 1 .

1 5 2 .

1 5 3 .

1 5 4 .1 5 5 .

1 5 6 .

1 5 7 .1 5 8 .1 5 9 .1 6 0 .

1 6 1 .

1 6 2 .

1 6 3 .

1 6 4 .1 6 5 .1 6 6 .

1 6 7 .

1 6 8 .

1 6 9 .

1 7 0 .

1 7 1 .1 7 2 .1 7 3 .1 7 4 .

1 7 5 .

1 7 6 .

1 7 7 .

1 7 8 .

1 7 9 .

1 8 0 .

1 8 1 .

1 8 2 .

1 8 3 .1 8 4 .1 8 5 .1 8 6 .1 8 7 .1 8 8 .

1 8 9 .

1 9 0 .1 9 1 .

1 9 2 .

0 2 4 4 8 7 2 9 6 1 2 0 1 4 4 1 6 8 1 9 2

1 0

1 0 0

J u r k a t 7 2 h o u r s

F ix a b le L iv e D e a d A q u a

S a m p le #

% D

ea

d C

ell

s

1 .

2 .3 .4 .5 .

6 .

7 .

8 .

9 .

1 0 .

1 1 .1 2 .

1 3 .

1 4 .

1 5 .

1 6 .

1 7 .

1 8 .

1 9 .

2 0 .

2 1 .2 2 .

2 3 .

2 4 .

2 5 .

2 6 .

2 7 .

2 8 .

2 9 .

3 0 .3 1 .3 2 .

3 3 .

3 4 .

3 5 .

3 6 .

3 7 .

3 8 .

3 9 .

4 0 .

4 1 .

4 2 .

4 3 .

4 4 .

4 5 .

4 6 .

4 7 .

4 8 .

4 9 .

5 0 .

5 1 .

5 2 .

5 3 .

5 4 .

5 5 .

5 6 .

5 7 .

5 8 .

5 9 .

6 0 .

6 1 .

6 2 .

6 3 .

6 4 .

6 5 .6 6 .

6 7 .6 8 .6 9 .

7 0 .

7 1 .

7 2 .

7 3 .

7 4 .

7 5 .7 6 .

7 7 .7 8 .7 9 .8 0 .

8 1 .

8 2 .

8 3 .

8 4 .

8 5 .

8 6 .

8 7 .8 8 .

8 9 .

9 0 .

9 1 .

9 2 .9 3 .

9 4 .

9 5 .

9 6 .

9 7 .

9 8 .

9 9 .

1 0 0 .1 0 1 .

1 0 2 .

1 0 3 .

1 0 4 .

1 0 5 .

1 0 6 .

1 0 7 .

1 0 8 .

1 0 9 .

1 1 0 .

1 1 1 .1 1 2 .

1 1 3 .

1 1 4 .

1 1 5 .

1 1 6 .1 1 7 .

1 1 8 .

1 1 9 .

1 2 0 .

1 2 1 .

1 2 2 .

1 2 3 .

1 2 4 .

1 2 5 .

1 2 6 .

1 2 7 .1 2 8 .

1 2 9 .

1 3 0 .1 3 1 .

1 3 2 .

1 3 3 .

1 3 4 .

1 3 5 .

1 3 6 .

1 3 7 .

1 3 8 .

1 3 9 .

1 4 0 .

1 4 1 .

1 4 2 .

1 4 3 .

1 4 4 .

1 4 5 .

1 4 6 .

1 4 7 .

1 4 8 .

1 4 9 .

1 5 0 .

1 5 1 .

1 5 2 .

1 5 3 .

1 5 4 .1 5 5 .

1 5 6 .

1 5 7 .

1 5 8 .1 5 9 .1 6 0 .

1 6 1 .

1 6 2 .

1 6 3 .

1 6 4 .1 6 5 .

1 6 6 .

1 6 7 .

1 6 8 .

1 6 9 .

1 7 0 .

1 7 1 .1 7 2 .

1 7 3 .

1 7 4 .

1 7 5 .1 7 6 .

1 7 7 .

1 7 8 .

1 7 9 .

1 8 0 .

1 8 1 .

1 8 2 .

1 8 3 .1 8 4 .1 8 5 .1 8 6 .1 8 7 .1 8 8 .1 8 9 .

1 9 0 .1 9 1 .

1 9 2 .

1 .

2 .3 .4 .

5 .

6 .

7 .

8 .

9 .

1 0 .1 1 .1 2 .

1 3 .

1 4 .

1 5 .

1 6 .

1 7 .

1 8 .

1 9 .

2 0 .

2 1 .

2 2 .

2 3 .

2 5 .

2 6 .

2 7 .

2 8 .

2 9 .3 0 .3 1 .

3 2 .

3 3 .

3 4 .

3 5 .

3 6 .

3 7 .

3 8 .

3 9 .

4 0 .

4 1 .

4 2 .

4 3 .

4 4 .

4 5 .4 6 .

4 7 .

4 8 .

4 9 .

5 0 .5 1 .

5 2 .

5 3 .

5 4 .

5 5 .5 6 .

5 7 .

5 8 .

5 9 .

6 0 .

6 1 .

6 2 .

6 3 .

6 4 .

6 5 .

6 6 .

6 7 .

6 8 .6 9 .7 0 .

7 1 .

7 2 .

7 3 .

7 4 .

7 5 .

7 6 .

7 7 .7 8 .

7 9 .

8 0 .

8 1 .

8 2 .

8 3 .

8 4 .

8 5 .

8 6 .

8 7 .8 8 .

8 9 .9 0 .

9 1 .

9 2 .

9 3 .

9 4 .

9 5 .9 6 .

9 7 .

9 8 .

9 9 .1 0 0 .

1 0 1 .

1 0 2 .

1 0 3 .

1 0 4 .

1 0 5 .

1 0 6 .

1 0 7 .

1 0 8 .

1 0 9 .

1 1 0 .

1 1 1 .1 1 2 .

1 1 3 .

1 1 4 .

1 1 5 .

1 1 6 .1 1 7 .

1 1 8 .

1 1 9 .

1 2 0 .

1 2 1 .1 2 2 .

1 2 3 .

1 2 4 .

1 2 5 .1 2 6 .

1 2 7 .

1 2 8 .

1 2 9 .1 3 0 .1 3 1 .

1 3 2 .

1 3 3 .

1 3 4 .

1 3 5 .

1 3 6 .

1 3 7 .

1 3 8 .1 3 9 .

1 4 0 .

1 4 1 .

1 4 2 .

1 4 3 .

1 4 4 .

1 4 5 .

1 4 6 .

1 4 7 .1 4 8 .1 4 9 .

1 5 0 .

1 5 1 .

1 5 2 .

1 5 3 .1 5 4 .1 5 5 .

1 5 6 .

1 5 7 .

1 5 8 .

1 5 9 .

1 6 0 .

1 6 1 .

1 6 2 .

1 6 3 .

1 6 4 .1 6 5 .

1 6 6 .1 6 7 .

1 6 8 .

1 6 9 .

1 7 0 .

1 7 1 .1 7 2 .1 7 3 .1 7 4 .

1 7 5 .

1 7 6 .

1 7 7 .

1 7 8 .

1 7 9 .

1 8 0 .

1 8 1 .

1 8 2 .

1 8 3 .1 8 4 .1 8 5 .1 8 6 .1 8 7 .

1 8 8 .

1 8 9 .

1 9 0 .1 9 1 .

1 9 2 .

Jurkat 19% O2

Figure 1. Screening of Ramos and Jurkat Cells Using PrestoBlue Cell Viability

Reagent as the Read-out.

Figure 2. Screening of Ramos and Jurkat Cells Using LIVE/DEAD Fixable Aqua

Dead Cell Stain as the Read-out.

Figure 7. Flow Analysis of Ramos cells Treated with Amsacrine

Flow Analysis Cherry Picking

Figure 3. Jurkat and Ramos Cells React Differently to the Same Drug

0 .0 1 0 .1 1 1 0 1 0 0

0

5 0

1 0 0

1 5 0

C lo fa z im in e # 1 7 5

(F ix a b le L iv e D e a d A q u a )

C lo fa z im in e (µ M )

No

rm

ali

ze

d M

FI

J u rk a t O 2 1 9 %

J u rk a t O 2 1 %

R a m o s O 2 1 9 %

R a m o s O 2 1 %

0 .0 1 0 .1 1 1 0 1 0 0

0

5 0

1 0 0

1 5 0

A m s a c r in e # 1 1 0

(P re s to B lu e )

A m s a c r in e (µ M )

No

rm

ali

ze

d R

FU

J u rk a t O 2 1 9 % A

J u rk a t O 2 1 % A

R a m o s O 2 1 9 % A

R a m o s O 2 1 % A

Figure 5. Similar Drugs Have Different Effects on Cell Type

Gambogic Acid (natural product from Garcinia hanburyi shown to activate caspases and have anti-

cancer activity) is a more potent drug than the amide version of same compound.

Figure 6. Mechanistic Read-outs Give Two Different results

Clofazimine (antibiotic used in multi-drug

therapy for leprosy) is a more potent drug

at 19% Oxygen for both Jurkat and Ramos

cells when analyzed using cellular

reduction potential as a cell health readout.

Figure 4. Oxygen Levels have an Effect on Drug Potency

Analyzing the redox potential of a cell

gave a difference in compound

potency compared to analyzing for

membrane integrity.

Cells plated at 40,000 cells per well, then treated with 10 µM of each drug from the Killer Collection from

MicroSource Discovery Systems, Inc., and stored at either 19% Oxygen or 1% Oxygen in 5% CO2 and at

37 ºC for 24, 48, and 72 hours. At for 24, 48, and 72 hours cells were treated with either LIVE/DEAD

Fixable Aqua Dead Cell Stain or PrestoBlue Cell Viability Reagent and analyzed on either the Attune NxT

or the Varioskan Flash.

LIVE/DEAD Fixable Aqua Dead Cell Stain –

Used to evaluate cell viability by flow

cytometry. Cell viability was determined by

the mean fluorescent intensity (MFI) of total

cell population. Reactive dye permeates

compromised cell membranes and reacts with

free amines on the cell surface and the

interior on the cell (Cell Membrane Integrity

Read-out). ~Z’ = 0.8

PrestoBlue Cell Viability Reagent – Used to

measure cytotoxicity and the proliferation of

cells by a spectrometer. Cell viability was

determined by measuring the mean

fluorescent intensity of total cells per well and

obtaining the relative fluorescent units (RFU)

per well. Resazurin (PrestoBlue reagent) is

reduced by the environment of living cells

(Metabolic Read-out). ~Z’ = 0.7

Attune NxT Flow Cytometer – Designed to use acoustic-assisted hydrodynamic focusing,

allowing for fast sample throughput rates.

Varioskan Flash – Spectral scanning reader for fluorescence, absorbance, time resolved

fluorescence, and luminescence.

High fluorescence Low fluorescence

0 .1 1 1 0 1 0 0

0

5 0

1 0 0

1 5 0

C lo fa z im in e # 1 7 5

(P re s to B lu e )

C lo fa z im in e (µ M )

No

rm

ali

ze

d R

FU

J u rk a t O 2 1 9 %

J u rk a t O 2 1 %

R a m o s O 2 1 9 %

R a m o s O 2 1 %

0 .0 1 0 .1 1 1 0 1 0 0

0

5 0

1 0 0

1 5 0

A m s a c r in e # 1 1 0

(F ix a b le L iv e D e a d A q u a )

A m s a c rin e (µ M )

No

rm

ali

ze

d M

FI

J u rk a t O 2 1 9 %

J u rk a t O 2 1 %

R a m os O 2 1 9 %

R a m o s O 2 1 %

Three distinct populations are seen with flow cytometry; live, dead, and unhealthy cells. Further analysis

with a different readout method(s) are planned for the near future.

60

µM

Am

sa

cri

ne

0

µM

Am

sa

cri

ne

19

µM

Am

sa

cri

ne

0 .0 1 0 .1 1 1 0 1 0 0

0

5 0

1 0 0

1 5 0

A m s a c r in e # 1 1 0

(F ix a b le L iv e D e a d A q u a )

A m s a c rin e (µ M )

No

rm

ali

ze

d M

FI

J u rk a t O 2 1 9 %

J u rk a t O 2 1 %

R a m os O 2 1 9 %

R a m o s O 2 1 %

0 .0 1 0 .1 1 1 0 1 0 0

0

5 0

1 0 0

1 5 0

A m s a c r in e # 1 1 0

(F ix a b le L iv e D e a d A q u a )

A m s a c rin e (µ M )

No

rm

ali

ze

d M

FI

J u rk a t O 2 1 9 %

J u rk a t O 2 1 %

R a m os O 2 1 9 %

R a m o s O 2 1 %

0 .0 1 0 .1 1 1 0 1 0 0

0

5 0

1 0 0

1 5 0

A m s a c r in e # 1 1 0

(F ix a b le L iv e D e a d A q u a )

A m s a c rin e (µ M )N

orm

ali

ze

d M

FI

J u rk a t O 2 1 9 %

J u rk a t O 2 1 %

R a m os O 2 1 9 %

R a m o s O 2 1 %

0 .0 1 0 .1 1 1 0 1 0 0

0

5 0

1 0 0

1 5 0

A m s a c r in e # 1 1 0

(F ix a b le L iv e D e a d A q u a )

A m s a c rin e (µ M )

No

rm

ali

ze

d M

FI

J u rk a t O 2 1 9 %

J u rk a t O 2 1 %

R a m os O 2 1 9 %

R a m o s O 2 1 %

P3643

For Research Use Only. Not for use in

diagnostic procedures

Live Dead

0 2 4 4 8 7 2 9 6 1 2 0 1 4 4 1 6 8 1 9 2

1 0

1 0 0

J u r k a t 4 8 h o u r s

F ix a b le L iv e D e a d A q u a

S a m p le #

% D

ea

d C

ell

s

1 .

2 .

3 .4 .5 .

6 .

7 .

8 .

9 .

1 0 .

1 1 .1 2 .

1 3 .

1 4 .

1 5 .

1 6 .

1 7 .

1 8 .

1 9 .

2 0 .2 1 .2 2 .

2 3 .

2 4 .

2 5 .

2 6 .

2 7 .

2 8 .

2 9 .

3 0 .3 1 .3 2 .

3 3 .

3 4 .

3 5 .

3 6 .

3 7 .

3 8 .

3 9 .

4 0 .

4 1 .

4 2 .

4 3 .

4 4 .

4 5 .

4 6 .

4 7 .

4 8 .

4 9 .

5 0 .

5 1 .

5 2 .

5 3 .

5 4 .

5 5 .

5 6 .

5 7 .

5 8 .

5 9 .

6 0 .

6 1 .

6 2 .

6 3 .

6 4 .

6 5 .6 6 .

6 7 .

6 8 .6 9 .

7 0 .

7 1 .

7 2 .

7 3 .7 4 .

7 5 .7 6 .

7 7 .7 8 .7 9 .8 0 .

8 1 .

8 2 .

8 3 .

8 4 .

8 5 .

8 6 .

8 7 .8 8 .

8 9 .

9 0 .9 1 .

9 2 .9 3 .

9 4 .

9 5 .

9 6 .

9 7 .

9 8 .

9 9 .

1 0 0 .1 0 1 .1 0 2 .

1 0 3 .

1 0 4 .

1 0 5 .

1 0 6 .

1 0 7 .

1 0 8 .

1 0 9 .

1 1 0 .

1 1 1 .1 1 2 .

1 1 3 .

1 1 4 .

1 1 5 .

1 1 6 .1 1 7 .

1 1 8 .

1 1 9 .

1 2 0 .

1 2 1 .

1 2 2 .

1 2 3 .

1 2 4 .

1 2 5 .1 2 6 .

1 2 7 .

1 2 8 .

1 2 9 .1 3 0 .1 3 1 .

1 3 2 .

1 3 3 .

1 3 4 .

1 3 5 .

1 3 6 .

1 3 7 .

1 3 8 .

1 3 9 .

1 4 0 .

1 4 1 .

1 4 2 .

1 4 3 .

1 4 4 .

1 4 5 .

1 4 6 .

1 4 7 .1 4 8 .

1 4 9 .

1 5 0 .

1 5 1 .

1 5 2 .

1 5 3 .

1 5 4 .1 5 5 .

1 5 6 .

1 5 7 .

1 5 8 .1 5 9 .1 6 0 .

1 6 1 .

1 6 2 .

1 6 3 .

1 6 4 .1 6 5 .

1 6 6 .1 6 7 .

1 6 8 .

1 6 9 .

1 7 0 .

1 7 1 .1 7 2 .

1 7 3 .1 7 4 .

1 7 5 .1 7 6 .

1 7 7 .

1 7 8 .

1 7 9 .

1 8 0 .

1 8 1 .

1 8 2 .

1 8 3 .1 8 4 .1 8 5 .

1 8 6 .

1 8 7 .1 8 8 .1 8 9 .

1 9 0 .

1 9 1 .

1 9 2 .

1 .

2 .

3 .

4 .

5 .

6 .

7 .

8 .

9 .

1 0 .

1 1 .1 2 .

1 3 .

1 4 .

1 5 .

1 6 .

1 7 .

1 8 .

1 9 .

2 0 .

2 1 .2 2 .

2 3 .

2 4 .

2 5 .

2 6 .2 7 .

2 8 .

2 9 .

3 0 .3 1 .

3 2 .

3 3 .

3 4 .

3 5 .

3 6 .

3 7 .3 8 .

3 9 .

4 0 .

4 1 .

4 2 .

4 3 .

4 4 .

4 5 .

4 6 .

4 7 .

4 8 .

4 9 .

5 0 .

5 1 .

5 2 .

5 3 .

5 4 .

5 5 .

5 6 .

5 7 .

5 8 .

5 9 .

6 0 .

6 1 .

6 2 .

6 3 .

6 4 .

6 5 .6 6 .

6 7 .

6 8 .

6 9 .

7 0 .

7 1 .

7 2 .

7 3 .7 4 .

7 5 .7 6 .

7 7 .7 8 .

7 9 .8 0 .

8 1 .

8 2 .

8 3 .

8 4 .

8 5 .

8 6 .

8 7 .

8 8 .

8 9 .

9 0 .9 1 .

9 2 .

9 3 .

9 4 .

9 5 .

9 6 .

9 7 .

9 8 .

9 9 .1 0 0 .

1 0 1 .

1 0 2 .

1 0 3 .

1 0 4 .

1 0 5 .

1 0 6 .

1 0 7 .

1 0 8 .

1 0 9 .

1 1 0 .

1 1 1 .1 1 2 .

1 1 3 .

1 1 4 .

1 1 5 .

1 1 6 .1 1 7 .

1 1 8 .

1 1 9 .

1 2 0 .

1 2 1 .1 2 2 .

1 2 3 .

1 2 4 .

1 2 5 .1 2 6 .

1 2 7 .

1 2 8 .

1 2 9 .1 3 0 .1 3 1 .

1 3 2 .

1 3 3 .1 3 4 .

1 3 5 .

1 3 6 .

1 3 7 .

1 3 8 .1 3 9 .

1 4 0 .

1 4 1 .

1 4 2 .

1 4 3 .

1 4 4 .

1 4 5 .

1 4 6 .

1 4 7 .

1 4 8 .

1 4 9 .

1 5 0 .

1 5 1 .

1 5 2 .

1 5 3 .

1 5 4 .1 5 5 .

1 5 6 .

1 5 7 .1 5 8 .1 5 9 .1 6 0 .

1 6 1 .

1 6 2 .

1 6 3 .

1 6 4 .1 6 5 .1 6 6 .

1 6 7 .

1 6 8 .

1 6 9 .

1 7 0 .

1 7 1 .1 7 2 .1 7 3 .1 7 4 .

1 7 5 .

1 7 6 .

1 7 7 .

1 7 8 .

1 7 9 .

1 8 0 .

1 8 1 .

1 8 2 .

1 8 3 .1 8 4 .1 8 5 .1 8 6 .1 8 7 .1 8 8 .

1 8 9 .

1 9 0 .1 9 1 .

1 9 2 .

1 9 %

1 %

0 2 4 4 8 7 2 9 6 1 2 0 1 4 4 1 6 8 1 9 2

1 0

1 0 0

J u r k a t 4 8 h o u r s

F ix a b le L iv e D e a d A q u a

S a m p le #

% D

ea

d C

ell

s

1 .

2 .

3 .4 .5 .

6 .

7 .

8 .

9 .

1 0 .

1 1 .1 2 .

1 3 .

1 4 .

1 5 .

1 6 .

1 7 .

1 8 .

1 9 .

2 0 .2 1 .2 2 .

2 3 .

2 4 .

2 5 .

2 6 .

2 7 .

2 8 .

2 9 .

3 0 .3 1 .3 2 .

3 3 .

3 4 .

3 5 .

3 6 .

3 7 .

3 8 .

3 9 .

4 0 .

4 1 .

4 2 .

4 3 .

4 4 .

4 5 .

4 6 .

4 7 .

4 8 .

4 9 .

5 0 .

5 1 .

5 2 .

5 3 .

5 4 .

5 5 .

5 6 .

5 7 .

5 8 .

5 9 .

6 0 .

6 1 .

6 2 .

6 3 .

6 4 .

6 5 .6 6 .

6 7 .

6 8 .6 9 .

7 0 .

7 1 .

7 2 .

7 3 .7 4 .

7 5 .7 6 .

7 7 .7 8 .7 9 .8 0 .

8 1 .

8 2 .

8 3 .

8 4 .

8 5 .

8 6 .

8 7 .8 8 .

8 9 .

9 0 .9 1 .

9 2 .9 3 .

9 4 .

9 5 .

9 6 .

9 7 .

9 8 .

9 9 .

1 0 0 .1 0 1 .1 0 2 .

1 0 3 .

1 0 4 .

1 0 5 .

1 0 6 .

1 0 7 .

1 0 8 .

1 0 9 .

1 1 0 .

1 1 1 .1 1 2 .

1 1 3 .

1 1 4 .

1 1 5 .

1 1 6 .1 1 7 .

1 1 8 .

1 1 9 .

1 2 0 .

1 2 1 .

1 2 2 .

1 2 3 .

1 2 4 .

1 2 5 .1 2 6 .

1 2 7 .

1 2 8 .

1 2 9 .1 3 0 .1 3 1 .

1 3 2 .

1 3 3 .

1 3 4 .

1 3 5 .

1 3 6 .

1 3 7 .

1 3 8 .

1 3 9 .

1 4 0 .

1 4 1 .

1 4 2 .

1 4 3 .

1 4 4 .

1 4 5 .

1 4 6 .

1 4 7 .1 4 8 .

1 4 9 .

1 5 0 .

1 5 1 .

1 5 2 .

1 5 3 .

1 5 4 .1 5 5 .

1 5 6 .

1 5 7 .

1 5 8 .1 5 9 .1 6 0 .

1 6 1 .

1 6 2 .

1 6 3 .

1 6 4 .1 6 5 .

1 6 6 .1 6 7 .

1 6 8 .

1 6 9 .

1 7 0 .

1 7 1 .1 7 2 .

1 7 3 .1 7 4 .

1 7 5 .1 7 6 .

1 7 7 .

1 7 8 .

1 7 9 .

1 8 0 .

1 8 1 .

1 8 2 .

1 8 3 .1 8 4 .1 8 5 .

1 8 6 .

1 8 7 .1 8 8 .1 8 9 .

1 9 0 .

1 9 1 .

1 9 2 .

1 .

2 .

3 .

4 .

5 .

6 .

7 .

8 .

9 .

1 0 .

1 1 .1 2 .

1 3 .

1 4 .

1 5 .

1 6 .

1 7 .

1 8 .

1 9 .

2 0 .

2 1 .2 2 .

2 3 .

2 4 .

2 5 .

2 6 .2 7 .

2 8 .

2 9 .

3 0 .3 1 .

3 2 .

3 3 .

3 4 .

3 5 .

3 6 .

3 7 .3 8 .

3 9 .

4 0 .

4 1 .

4 2 .

4 3 .

4 4 .

4 5 .

4 6 .

4 7 .

4 8 .

4 9 .

5 0 .

5 1 .

5 2 .

5 3 .

5 4 .

5 5 .

5 6 .

5 7 .

5 8 .

5 9 .

6 0 .

6 1 .

6 2 .

6 3 .

6 4 .

6 5 .6 6 .

6 7 .

6 8 .

6 9 .

7 0 .

7 1 .

7 2 .

7 3 .7 4 .

7 5 .7 6 .

7 7 .7 8 .

7 9 .8 0 .

8 1 .

8 2 .

8 3 .

8 4 .

8 5 .

8 6 .

8 7 .

8 8 .

8 9 .

9 0 .9 1 .

9 2 .

9 3 .

9 4 .

9 5 .

9 6 .

9 7 .

9 8 .

9 9 .1 0 0 .

1 0 1 .

1 0 2 .

1 0 3 .

1 0 4 .

1 0 5 .

1 0 6 .

1 0 7 .

1 0 8 .

1 0 9 .

1 1 0 .

1 1 1 .1 1 2 .

1 1 3 .

1 1 4 .

1 1 5 .

1 1 6 .1 1 7 .

1 1 8 .

1 1 9 .

1 2 0 .

1 2 1 .1 2 2 .

1 2 3 .

1 2 4 .

1 2 5 .1 2 6 .

1 2 7 .

1 2 8 .

1 2 9 .1 3 0 .1 3 1 .

1 3 2 .

1 3 3 .1 3 4 .

1 3 5 .

1 3 6 .

1 3 7 .

1 3 8 .1 3 9 .

1 4 0 .

1 4 1 .

1 4 2 .

1 4 3 .

1 4 4 .

1 4 5 .

1 4 6 .

1 4 7 .

1 4 8 .

1 4 9 .

1 5 0 .

1 5 1 .

1 5 2 .

1 5 3 .

1 5 4 .1 5 5 .

1 5 6 .

1 5 7 .1 5 8 .1 5 9 .1 6 0 .

1 6 1 .

1 6 2 .

1 6 3 .

1 6 4 .1 6 5 .1 6 6 .

1 6 7 .

1 6 8 .

1 6 9 .

1 7 0 .

1 7 1 .1 7 2 .1 7 3 .1 7 4 .

1 7 5 .

1 7 6 .

1 7 7 .

1 7 8 .

1 7 9 .

1 8 0 .

1 8 1 .

1 8 2 .

1 8 3 .1 8 4 .1 8 5 .1 8 6 .1 8 7 .1 8 8 .

1 8 9 .

1 9 0 .1 9 1 .

1 9 2 .

1 9 %

1 %

Amsacrine

Cell Type 19% Oxygen 1% Oxygen 19% Oxygen 1% Oxygen

Jurkat ~ 0.57 µM 0.26 µM 4.96 µM 6.60 µM

Ramos ~ 23.30 µM ~ 20.17 µM ~ 71.57 µM ~ 64.95 µM

PrestoBlue Cell

Viability Reagent

LIVE/DEAD Fixable

Aqua Dead Cell Stain

IC50 Drug Dose Response Table

Clofazimine

Cell Type 19% Oxygen 1% Oxygen 19% Oxygen 1% Oxygen

Jurkat 10.69 µM ~ 30.86 µM NA NA

Ramos 4.77 µM ~ 9.21 µM NA NA

PrestoBlue Cell

Viability Reagent

LIVE/DEAD Fixable

Aqua Dead Cell Stain

IC50 Drug Dose Response Table

Gambogic

Acid Amide

Cell Type 19% Oxygen 1% Oxygen 19% Oxygen 1% Oxygen

Jurkat 0.60 µM 0.58 µM 2.50 µM 2.78 µM

Ramos 0.19 µM 0.19 µM 1.01 µM 2.25 µM

PrestoBlue Cell

Viability Reagent

LIVE/DEAD Fixable

Aqua Dead Cell Stain

IC50 Drug Dose Response Table

Gambogic

Acid

Cell Type 19% Oxygen 1% Oxygen 19% Oxygen 1% Oxygen

Jurkat 0.60 µM 0.58 µM ~ 0.57 µM ~ 0.53 µM

Ramos 0.19 µM 0.19 µM ~ 0.30 µM ~ 0.33 µM

IC50 Drug Dose Response Table

LIVE/DEAD Fixable

Aqua Dead Cell Stain

PrestoBlue Cell

Viability Reagent

Benzyl

Isothiocyanate

Cell Type 19% Oxygen 1% Oxygen 19% Oxygen 1% Oxygen

Jurkat 1.48 µM 1.06 µM NA NA

Ramos 1.50 µM ~2.63 µM NA NA

IC50 Drug Dose Response TablePrestoBlue Cell

Viability Reagent

LIVE/DEAD Fixable

Aqua Dead Cell Stain

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F ix a b le L iv e D e a d A q u a

S a m p le #

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d C

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1 0 1 .

1 1 0 .

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1 0 1 .

1 1 0 .

1 7 5 .

0 2 4 4 8 7 2 9 6 1 2 0 1 4 4 1 6 8 1 9 2

1

1 0

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1 0 1 .

1 1 0 .

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1 0 1 .

1 1 0 .

1 7 5 .

0 2 4 4 8 7 2 9 6 1 2 0 1 4 4 1 6 8 1 9 2

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1 0

1 0 0

J u r k a t 2 4 h o u r s

P re s to B lu e

S a m p le #

RF

U 2 . 7 .

1 0 1 .

1 1 0 . 1 7 5 .

2 . 7 .

1 0 1 .

1 1 0 .

1 7 5 .

0 2 4 4 8 7 2 9 6 1 2 0 1 4 4 1 6 8 1 9 2

1

1 0

1 0 0

R a m o s 2 4 h o u r s

P re s to B lu e

S a m p le #R

FU

2 . 7 .

1 0 1 .1 1 0 . 1 7 5 .

2 .

7 . 1 0 1 .

1 1 0 .

1 7 5 .

MATERIALS AND METHODS