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Transformation of the green alga Haematococcus pluvialis with a phytoene

desaturase for accelerated astaxanthin biosynthesis

Jens Steinbrenner1,* and Gerhard Sandmann2

1 Department of Plant Physiology and Biochemistry, Universität Konstanz, D-78434

Konstanz, Germany;

2 Institute for Molecular Biosciences 213, J.W. Goethe Universität, P.O. Box 111932, D-

60054 Frankfurt/M., Germany

Jens Steinbrenner

Department of Plant Physiology and Biochemistry

Universität Konstanz

D-78434 Konstanz

Germany

Tel +49-7531-883668

Fax +49-7531-883042

E-mail: [email protected]

*corresponding author, Fax +49-7531-883042, e-mail: Jens.Steinbrenner@uni-

konstanz.de

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ABSTRACT 1

Astaxanthin is a high-value carotenoid, which is used as a pigmentation source in 2

fish aquaculture. Additionally, a beneficial role of astaxanthin as a food supplement for 3

humans is suggested. The unicellular alga Haematococcus pluvialis is a suitable 4

biological source for astaxanthin production. In the context of the strong biotechnological 5

relevance of H. pluvialis, we developed a genetic transformation protocol for metabolic 6

engineering of this green alga. First, the gene coding for the carotenoid biosynthesis 7

enzyme phytoene desaturase was isolated from H. pluvialis and modified by site directed 8

mutagenesis changing leucin 504 to arginine. In an in vitro assay, the modified phytoene 9

desaturase was still active in the conversion of phytoene to ζ-carotene and revealed a 43 10

fold higher resistance towards the bleaching herbicide norflurazon. Upon biolistic 11

transformation using the modified phytoene desaturase as reporter gene and selection 12

with norflurazon, the integration in the nuclear genome of H. pluvialis and gene and 13

protein expression of phytoene desaturase were shown by Southern, Northern and 14

Western blots, respectively, in eleven transformants. Some of the transformants exhibited 15

a higher carotenoid content in the green state which correlated with increased non-16

photochemical quenching. This chlorophyll fluorescence measurement can be used as a 17

screening procedure for stable transformants. Stress induction of astaxanthin biosynthesis 18

by high light showed an accelerated accumulation of astaxanthin in one of the 19

transformants as compared to the wild type. Our results strongly indicate that the 20

modified phytoene desaturase gene is a useful tool for the genetic engineering of 21

carotenoid biosynthesis in H. pluvialis. 22

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Key Words: astaxanthin, carotenoid biosynthesis, genetic engineering, green algae, 24

Haematococcus pluvialis, phytoene desaturase, transformation. 25

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Abbreviations: Bhy, β-carotenoid hydroxylase; CrtP, cyanobacterial phytoene 27

desaturase; NPQ, non-photochemical quenching; OHA, optimal Haematococcus medium 28

supplemented with sodium acetate; OHM, optimal Haematococcus medium; Pds, 29

phytoene desaturase ; Pds-L504R phytoene desaturase with codon exchange at position 30

504 from leucine to arginine; RF, resistance factor; WT, wild type. 31

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INTRODUCTION 50

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Among all carotenoids used as food supplement for humans, for food coloration or as 52

pigmentation source for egg yolk the ketocarotenoid astaxanthin (3,3’-dihydroxy-diketo-53

β,β-carotene-4,4’-dione) is the most important from the biotechnological viewpoint (4, 54

22). Besides the use as colorant it was discussed that astaxanthin supplementation might 55

be a practical and beneficial strategy in human health management due to its 56

neuroprotective, its immunomodulating and its antioxidant potential (13). Although most 57

of the astaxanthin is produced by total chemical synthesis today and sold at a price of 58

$2500 kg-1 (16), the high price and the increasing demand as a food supplement provide a 59

good opportunity for naturally produced astaxanthin. 60

Biosynthesis of astaxanthin has been observed only in a limited number of 61

organisms, e.g. in some marine bacteria, in the yeast Xanthophyllomyces dendrorhous 62

and in some green algae (16). The unicellular green alga Haematococcus pluvialis reveals 63

the highest astaxanthin accumulation (up to 4% /g [dry weight]) and seems to be a very 64

promising source for natural astaxanthin (3). A promising strategy to further improve the 65

astaxanthin yield of H. pluvialis is the genetic engineering of the carotenoid biosynthesis 66

pathway. 67

There are two reports of successful transformation of H. pluvialis by particle 68

bombardment using the β-galactosidase gene (lacZ) (26, 41). The reporter gene was 69

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transiently expressed under the control of the SV40 promoter or the β-carotene ketolase 70

promoter. Unfortunately, a stable transformation was not obtained. Moreover, to date, 71

there are no reports of a dominant selective transformation system for H. pluvialis. For 72

the establishment of a stable transformation system several genetic tools are needed. This 73

includes the choice of a reporter gene, a strong promoter and an adapted termination 74

signal and a suitable method for stable DNA transfer into the cells. For H. pluvialis no 75

strong promoters were isolated, yet. A further problem known from the transformation of 76

other green algae is, that for foreign genes introduced e.g. into Chlamydomonas 77

reinhardtii display low transcript levels despite being fused to strong endogeneous 78

promoters (24). It has been suggested that such failures of exogenous gene expression 79

might be due to mismatches in codon usage patterns (34), epigenic silencing by DNA 80

methylation or changes in chromatin domain structure (1, 15), and/or rapid mRNA 81

degradation (7). These hurdles might be overcome by selecting a modified endogenous 82

gene from the organism to be transformed (19, 29, 31). 83

Sequence information for genes that could be adapted as dominant selective 84

markers after appropriate genetic modifications are not available from H. pluvialis to 85

date. The limited sequence information that is available includes most of the carotenoid 86

biosynthesis genes (12, 17, 21, 23, 37, 38, 40). Among these the phytoene desaturase 87

(Pds) is the target for the bleaching herbicide norflurazon. (6, 8, 25, 33). For the phytoene 88

desaturase (CrtP) from Synechococcus sp. PCC 7942 it is known that four known amino 89

acid exchanges lead to norflurazon resistance as shown in figure 1A. Since H. pluvialis is 90

highly sensitive against this herbicide and high sequence similarities exist between the 91

Synechococcus sp. and the H. pluvialis protein, an exchange of one of the amino acids in 92

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Fig. 1A should be a promising strategy to engineer norflurazon resistance to the 93

Haematococcus Pds and use this modified pds gene as a dominant selectable marker and 94

a reporter gene for the transformation of H. pluvialis. 95

The present investigation describes the isolation of the gene coding for the 96

carotenoid biosynthesis enzyme Pds from H. pluvialis. After mutation of the pds gene 97

resulting in a norflurazone-resitant phytoene desaturase, this gene was used for successful 98

nuclear transformation and the genetic engineering of the carotenoid biosynthesis 99

pathway for accelerated astaxanthin biosynthesis. 100

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MATERIALS AND METHODS 105

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Haematococcus pluvialis strain, growth conditions, media. H. pluvialis Flotow 107

NIES-144 was obtained from the National Institute for Environmental Studies (NIES), 108

Tsukuba, Japan and was grown in basal medium containing acetate (18). Growth was 109

performed at 22°C in Erlenmeyer flasks without aeration under a dark/light cycle of 12 h 110

low light (20 µmol photons m-2 s-1, provided by universal-white lamps Osram L65W/25S) 111

and 12 h dark for 3 d (final cell density approximately 3.5 × 105 cells/ml). Cultures were 112

shaken manually once a day. For high light treatments, H. pluvialis was grown at 175 113

µmol photons m-2 s-1 at continuous light as indicated. For strong light treatments, H. 114

pluvialis cells were set at 700 µmol photons m-2 s-1. For transformation protocols, optimal 115

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H. pluvialis medium (OHM) (11), supplemented with 2.42 g Tris-Acetate pH 7.2 (OHA) 116

was used. After transformation, cells were plated on solid OHA medium, containing 5 117

µM norflurazon. 118

Construction of genomic DNA library, screening and DNA sequencing. For 119

genomic DNA isolation, H. pluvialis cells were collected by centrifugation after a growth 120

period of 3 d. The cells were frozen and subsequently powdered under liquid nitrogen 121

using a mortar and pestle. Genomic DNA was isolated by using the Plant DNA Isolation 122

Kit (Roche) following the manufacturers instructions. The genomic DNA library was 123

constructed using the SuperCos I Vector Kit (Stratagene) according to the manufacturers 124

instructions. The screening of the genomic DNA library for the isolation of the pds gene 125

was carried out by colony hybridization using a specific pds cDNA probe according to 126

the instructions in the DIG Nonradioactive Nucleic Acid Labeling and Detection System 127

(Roche). Probe labeling and hybridization were carried out as described earlier (38). 128

Positive clones were purified and cosmid DNA was isolated using High Pure Plasmid 129

Isolation Kit (Roche) and analyzed by Southern blotting. After restriction of DNA by 130

enzyme digestion, a 5.78 kb XbaI/XhoI fragment harbouring a pds gene fragment was 131

isolated and cloned in the pBluescriptSK- vector (Stratagene). The resulting plasmid was 132

named pBluescript-pds. The nucleotide sequence of H. pluvialis pds gene was determined 133

for both strands using the Abi Prism Dye Terminator Cycle Sequencing Ready Reaction 134

Kit (Perkin Elmer). The analysis of nucleotide and derived amino acid sequences was 135

carried out using the Lasergene program (DNASTAR, Inc.). The intron exon organization 136

of the pds gene is shown in Fig. 1B. 137

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Construction of the transformation vector Plat-pds-L504R. The mutated form 138

of the pds gene from H. pluvialis (with codon exchange 504 leucine to arginine) was 139

constructed by site-directed mutagenesis using the vector pBluescript-pds and the primers 140

5´-cc aag cag aag tac cgc gcc tcc atg gag gg-3´ and 5´-ccc tcc atg gag gcg cgg tac ttc tgc 141

ttg g-3´ (the codon for the exchange from leucine to arginine is marked in bold). For 142

mutagenesis the Quickchange Mutagenesis Kit (Stratagene) was used. The plasmid with 143

the modified pds was named pBluescript-pds-L504R. To verify the nucleotide exchange, 144

the H. pluvialis pds gene was partially sequenced using the Abi Prism Dye Terminator 145

Cycle Sequencing Ready Reaction Kit (Perkin Elmer). To maintain the multiple cloning 146

site for the final transformation vector, the mutated pds gene was amplified by PCR using 147

the primers 5´-cgc gat atc ggt gag ggg ttc aag tgc c-3´ and 5´-ccg ata tcg ttt gaa ttt tgg ctt 148

gtt tgc-3´. In this step, the end standing XhoI and XbaI restriction sites of the pds gene 149

were eliminated and two EcoRV sites were introduced into the PCR product. By 150

restriction digest with EcoRV the PCR product was cloned into the NaeI site of a 151

pBluescriptSK(-) vector. The resulting transformation vector was named pPlat-pds-152

L504R (Fig. 1 C). 153

cDNA synthesis. To recover the mutation within the cDNA pool of pds WT and 154

the mutated pds (Pds-L504R) transcripts, total RNA was isolated and cDNA synthesis 155

was performed using iScript cDNA synthesis Kit (Biorad) according to the 156

manufacturer’s instructions. For the specific PCR amplification of pds cDNAs, the 157

primers 5´-act cta gaa atg cag aca aca atg cgt ggc-3´ together with 5´-ccc gga ttc aat agt 158

ata cac cac aag c-3´ were used. The resulting PCR products were sequenced to verify the 159

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nucleotide exchange at the codon position 504 within the cDNA pool of the H. pluvialis 160

pds transcripts. 161

Transformation and growth of Escherichia coli. Escherichia coli strain BL21 162

(DE3) (Novagene) was transformed with individual plasmids for the expression of Pds 163

from H. puvialis in its wild type (Pds WT) or mutated form (Pds-L504R). For the 164

production of phytoene as substrate in the enzyme reaction, E. coli JM101 cells 165

harbouring the plasmid pACCRT-EB were used (28). Growth was performed in LB 166

medium supplied with appropriate antibiotics in concentrations of 100 µg/mL ampicillin 167

and 50 µg/mL chloramphenicol. To the enzyme expressing strains, 168

isopropylthiogalactose (1 mM) was added to the culture after an optical cell density 169

(OD600, 1 cm light path) of 0.6 was reached. Growth was performed at 25 °C overnight. 170

Plasmid pBlue-pdsWT, which mediates the overexpression of the Pds WT of H. pluvialis, 171

was constructed by RT-PCR reaction of the corresponding cDNA using the primers 5´-172

act cta gaa atg cag aca aca atg cgt ggc-3´ together with 5´-ccc gga ttc aat agt ata cac cac 173

aag c-3´ and cloning in frame into the XbaI/EcoRI sites of the vector pBluescriptSK- 174

(Stratagene). 175

The Pds-L504R from H. pluvialis was constructed by site-directed mutagenesis 176

using the vector pBlue-pdsWT and the primers 5´-cc aag cag aag tac cgc gcc tcc atg gag 177

gg-3´ and 5´-ccc tcc atg gag gcg cgg tac ttc tgc ttg g-3´ (codon 504 for the exchange from 178

leucine to arginine is marked in bold). The resulting plasmid was named pBlue-pds-179

L504R For the overexpression of the Pds WT and Pds-L504R the pET system 180

(Novagene) was used. Therefore the plasmids pBlue-pdsWT and pBlue-pds-L504R were 181

restriction digested and the corresponding cDNAs were cloned in frame into the 182

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SacI/XhoI sites of the expression vector pET24b. The resulting plasmids were pET24b-183

pdsWT and pET24b-pds-L504R. 184

PDS assay including substrate and enzyme preparation. Extraction of 185

phytoene, the preparation of the enzyme and the Pds enzyme assay were performed 186

according to Breitenbach and coworker (5). To the PDS assay, norflurazon was applied in 187

increasing concentrations from 0.001 µM to 0.5 µM to the Pds WT enzyme and from 0.5 188

µM to 20 µM to the engineered Pds-L504R 189

Transformation protocol. Haematococcus cells were grown in basal medium for 190

3 d under standard conditions (see above). Cells were concentrated by centrifugation and 191

re-suspended to a density of approximately 1 × 108 cells/ml OHA medium. 1 ml of 192

concentrated cells was used for each bombardment, plated on nylon filters on OHA 193

plates. For transformation, the Biolistic PDS-1000/He system was used (Biorad). 194

Fifty µl of M 17 tungsten particles solution (60 mg/ml in H2O) were mixed with 2 195

µl of DNA solution (1 µg/µl), 50 µl 2.5 M CaCl2 and 20 µl of 0.1 M spermidine-base. 196

The mixture was incubated for 10 min at RT, centrifuged for 10 sec and the pellet was re-197

suspended in 250 µl ethanol. After an additional centrifugation for 10 sec the pellet was 198

re-suspended in 50 µl ethanol. Twenty µl of DNA-coated particles were layered on a 199

macrocarrier. 200

Plates were bombarded at a distance of 7.5 cm under vacuum of 25 mmHg using 201

1350 psi rupture disks. After transformation, the cell-containing nylon disks were placed 202

in 50 ml OHA medium for a regeneration period of 24 h under a dark/light cycle of 12 h 203

low light (20 µmol photons m-2 s-1). After this period the cells were concentrated by 204

centrifugation and plated on 10 8-cm-diameter Petri dishes containing selective OHA 205

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medium. Colonies appearing after one month were picked and re-streaked at least three 206

times on selective OHA medium. 207

Northern and Southern blot analysis. Probe labeling and hybridization were 208

carried out according to the instructions in the DIG Nonradioactive Nucleic Acid 209

Labeling and Detection System (Roche). The H. pluvialis cDNAs pds (EMBL GenBank 210

accession no. X86783) and bhy (EMBL GenBank accession no. AF162276) were applied 211

as probes. For the analysis of vector integration into the nuclear genome of H. pluvialis, 212

an additional hybridization probe against the ampicillin resistance cassette was used. 213

For Northern Blot analysis the H. pluvialis cells were collected by centrifugation 214

after 3 d of growth. The cells were frozen and subsequently powdered under liquid 215

nitrogen using a mortar and pestle. RNA was then isolated according to the miniprep 216

RNA extraction procedure as described (36). The Northern blot analysis was performed 217

as described earlier (38). 218

For Southern blot analysis, genomic DNA was isolated by using the Plant DNA 219

Isolation Kit (Roche) following the manufacturers instructions. The genomic DNA (5 µg) 220

was XbaI/XhoI digested, the DNA fragments were separated by electrophoresis on a 0.8% 221

agarose gel, transferred to a positively charged nylon membrane (Roche) and hybridized 222

with pds cDNA probe or the ampicilin resistance gene probe in the presence of 50% 223

formamide at 42°C. 224

Isolation of proteins and Western blot analysis. The polyclonal antibody 225

against the Pds was kindly provided by Dr. C. Hagen (12). For protein isolation, H. 226

pluvialis transformants were collected by centrifugation after a growth period of 3 d. The 227

cells were frozen and subsequently powdered under liquid nitrogen using a mortar and 228

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pestle. The proteins were precipitated and 75 µg of each transformant protein extract was 229

separated on a 12% SDS-polyacrylamide gel, electroblotted to a PVDF membrane (0.45 230

µm pore-size) (Amersham Biosiences Europe GmbH, Freiburg, Germany), probed with 231

anti-Pds antibody at 1:5000 dilution and a horseradish peroxidase-linked anti-rabbit-232

immunoglobin antibody at 1:20000 dilution. Signals were visualized by using the 233

enhanced chemiluminescence (ECL) Western blotting detection system and Hyperfilm 234

ECL (Amersham, Biosiences). A second, identically loaded gel was run as control and 235

stained with Coomassie Brilliant Blue 250R (not shown). 236

Carotenoid and chlorophyll analysis. For carotenoid analysis in the green state, 237

cells under strong light were instantly frozen in liquid nitrogen and freeze-dried. 238

Extraction was with methanol containing 6% (w/v) KOH at 60°C for 20 min. The 239

extracts were partitioned against 10% (v/v) diethyl ether in petrol and the carotenoid 240

content determined by HPLC on a 25 cm C18 Vydac 218TP54 column with methanol as 241

mobile phase at 20°C (10). Reference carotenoids were isolated from cyanobacteria (39) 242

or pepper leaves (35). Carotenoid extraction, HPLC analysis and the quantification of 243

astaxanthin and astaxanthin esters from H. pluvialis was carried as reported earlier (38). 244

Chlorophyll was extracted in a similar way using methanol without the addition of KOH 245

and quantitated as described by Lichtenthaler and Wellburn (20). Carotenoid and 246

chlorophyll values are given as the means of four independent determinations together 247

with the standard deviation. 248

Chlorophyll fluorescent measurements. Screening of transformants for changed 249

fluorescence parameters was performed using the Walz pulse-amplitude modulation 250

(PAM) Fluorescent Imaging System, model IMAG (Walz, Effeltrich, Germany). 251

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Transformants and WT cells were grown on OHA solid medium without norflurazon for 252

3 weeks. Before measurement the cells were adapted for 4 hours in the dark. A saturating 253

pulse (800 ms) of blue light (2400 µmol photons m-2 s-1) was provided via LED lamps for 254

determination of Fm (maximum fluorescence in the dark-adapted state). Actinic light (180 255

µmol photons m-2 s-1) was provided via blue light LED lamps. The measuring beam was 256

switched to 2 Hz during saturating pulses and during actinic illumination. NPQ was 257

calculated as (Fm- Fm´)/ Fm´ using the provided imaging software. 258

Nucleotide sequence and accession number. The nucleotide sequence of the 259

transformation vector pPlat-pds-L504R has been deposited in the GeneBank database 260

under the accession number DQ404589. 261

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RESULTS 265

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Isolation of the Haematococcus pluvialis nuclear gene coding for Pds. 267

Norflrazon resistance of the mutated pds gene was chosen as a suitable selection marker. 268

Furthermore, transformation with this gene should modify carotenogenesis in H. 269

pluvialis. For the isolation of the pds gene, a genomic DNA library of H. pluvialis was 270

screened using a specific hybridization probe against the pds cDNA. Eight different 271

clones with genomic fragments sizes between 30 and 45 kbp harboring the putative pds 272

gene were collected. By XbaI/XhoI digestion a 5.78 kb fragment was isolated and cloned 273

in the corresponding restriction sites of the pBluescriptSK(-) vector (Stratagene). The 274

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DNA fragment was sequenced and an alignment with the known pds cDNA of H. 275

pluvialis revealed a 2 kb promoter region, 7 introns and a 423 bps 3´-untranslated region. 276

The intron and exon organization is shown in Fig. 1B. 277

The Pds-L504R shows higher resistance towards the bleaching herbicide 278

norflurazon in the in vitro assay compared to the Pds WT. The desaturase activity of 279

an E. coli recombinant Pds WT and Pds-L504R of H. pluvialis (with codon exchange 504 280

leucine to arginine) was measured by the conversion of phytoene to ζ-carotene after the 281

addition of different concentrations of norflurazon using an in vitro assay. The Dixon plot 282

of the reciprocal product formation versus increasing concentrations of the inhibitor 283

norflurazon resulted in a straight line with r = 90% for the Pds WT and r = 91% for the 284

Pds-L504R, respectively (Fig. 2) (9). From the intercepts with the x-axis the ki values for 285

norflurazon as inhibitor were calculated to be 0.14 µM and 5.98 µM for the heterologous 286

expressed Pds WT and Pds-L504R, respectively. In comparison to the wild type enzyme 287

the mutated form revealed a 43 fold higher resistance. 288

Analysis of Haematococcus transformants. After transformation of H. pluvialis 289

with the vector pPlat-pds-L504R and pBluescript-Pds by particle bombardment and a 290

regeneration period the cells were plated on norflurazon containing OHA plates. After 291

one month of growth, colonies appeared in samples that were transformed with the vector 292

pPlat-pds-L504R. No growth was visible when the vector pBluescript-pds, harbouring the 293

pds WT gene, was used for transformation. It is difficult to estimate the efficiency of 294

transformation by particle bombardment on a cell basis because many of the cells are 295

outside the target zone. In these experiments using ∼108 cells and 1 µg of DNA, generally 296

100 transformants were recovered. Therefore, transformation efficiency was estimated in 297

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the range of 10-6 cells/µg DNA. Although the transformation rate is rather low when 298

compared to C. reinhardtii, transformations with similar rates were reproducible and the 299

obtained transformants grow well under selective and nonselective conditions. 300

Transformants show additional copies of pds-L504R within the nuclear 301

genome. After a growth period of one month, the appearing colonies were re-streaked for 302

at least three rounds on norflurazon containing plates and then incubated in liquid media. 303

To determine if the resistance against norflurazon was due to stable nuclear integration of 304

the engineered pds gene, Southern blot analysis of the transformants was performed with 305

hybridization probes against the pds and the ampicillin resistance cassette of the 306

transformation vector. DNA was isolated from cultures of eleven individual 307

transformants and digested by restriction enzymes and hybridized with a probe against 308

the pds (Fig. 3A). The endogenous pds gene was detected in all transformants and the 309

WT H. pluvialis strain, the size of 5.78 kb is corresponding to the size of the XhoI/XbaI-310

fragment that was isolated and subcloned from the genomic DNA library of H. pluvialis. 311

All tested transformants show additional copies of the engineered pds -L504R gene with 312

larger sizes than the endogenous pds WT gene. To verify the integration of the transgenes 313

into the nuclear genome of H. pluvialis, additional Southern blot analysis using a 314

hybridization probe against the ampicillin resistance cassette of the transformation vector 315

was performed (Fig. 3B). The data support the results obtained in Fig. 3A, where the pds 316

cDNA was used as a hybridization probe. Almost all transformants with the exception of 317

one of the eleven transformants tested yielded one or more bands as visible evidence for 318

transgene integration into the genome. No ampcillin resistance cassette band was detected 319

in transformant P3 and the WT H. pluvialis, although this transformant was about 20-fold 320

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more resistant to norflurazon as the WT in an assay with increasing norflurazon 321

concentration on OHA plates (data not shown). Transformant P3 showed the additional 322

bands between 9.41 and 23.1 kb in the Southern blot using the pds cDNA hybridization 323

probe (Fig. 3A). This finding indicates a loss of the ampicillin resistance cassette and 324

perhaps parts of the transformation vector during the integration event of the transgene 325

into the nuclear genome of H. pluvialis. 326

The transformation stability was analyzed using the plasmid pBluescript-pds-327

L504R, harboring the engineered pds-L504R gene within the multiple cloning site. After 328

a growth period over 20 weeks (approx. 80 generations, growth rate 0.58 d-1) under 329

nonselective conditions, still 70% of the analyzed transformants retained their 330

norflurazon resistance and revealed a stable transgene integration within the genome 331

(data not shown). 332

The transformants show increased pds expression levels compared to the WT 333

To monitor whether the additional copies of transgene in the genome of the eleven 334

analyzed transformants change the expression level of the pds mRNA, Northern blot 335

analysis was carried out. For further comparison of the pds expression levels between the 336

different transformants and the WT, total RNA was extracted from WT cells before and 337

after 18 h and 36 h high light treatment. Recently, it was demonstrated that the expression 338

of genes encoding enzymes involved in the carotenoid biosynthesis are up regulated in 339

response to increased light intensities (37, 38). Exposure of low light grown WT cultures 340

to higher light intensities resulted in the accumulation of pds transcripts (Fig. 4A). The 341

pds transcript level in the transformants grown at low light conditions were analyzed 342

(Fig. 4A). Seven out of eleven transformants revealed an unchanged basal expression of 343

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the pds gene under the tested condition. The transformants P3, P6, P10, P11 showed 344

increased levels of pds transcripts compared to the WT (Fig. 4A). To gain further 345

information whether the up-regulation of the pds transcripts is due to stress effects or to 346

additional copies of the pds gene in the nuclear genome, the expression of the bhy gene 347

was tested under the same conditions (Fig 4B). In earlier experiments, it was shown that 348

the bhy gene expression was only detected under stress conditions (37, 38). In all 349

transformants, expression of the bhy gene was below detection. However, light induction 350

of the bhy gene was observed in the WT cells included as a stress control. Since the 351

transcript level not necessarily matches the protein level, Western blot analysis using 352

Pds-antibodies were performed. The results revealed that the amount of Pds correlates 353

with the level of its transcripts. 354

355

The transformants show a mixture of pds WT and pds-L504R transcripts 356

To gain further information on the expression of the transgenic pds -L504R as well as the 357

functionality of the promoter and terminator region of the 5.7 kb pds gene, cDNA 358

synthesis and subsequent sequencing of the pds transcript pool was performed. The 359

cDNAs of the wild type H. pluvialis and of the two transformants P3 and P11 were 360

investigated by sequencing (data not shown). No additional mutations were found within 361

the pds cDNA except a mixture of ctg and cgc at codon position 504 for the 362

transformants P3 and P11. The obtained pds WT cDNA was identical with that present in 363

the EMBL GenBank. These findings indicate that the 2 kb promoter region of the 364

engineered 5.7 kb pds gene fragment isolated from a H. pluvialis genomic DNA library is 365

sufficient to drive transgene expression. 366

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Carotenoids, chlorophylls and non-photochemical quenching of selected 367

transformants. Analysis of norflurazon resistant Synechococcus sp. mutants revealed 368

that phytoene desaturation is a rate-limiting step in carotenoid biosynthesis in 369

cyanobactria (8). Furthermore, previous results indicated that the heterologous expression 370

of the phytoene desaturase gene (crtI) from Erwinia uredovora in tobacco changed the 371

composition of leaf carotenoids (27). To obtain more information about these processes 372

in H. pluvialis, transformants were grown under low light intensities or 1h strong light 373

and carotenoid concentration and composition was determined in green cells (Table 1). 374

Transformants P3 and P11 both showed a higher carotenoid content as compared with the 375

WT. Additionally, the chlorophyll concentration in transformant P3 was lower, resulting 376

in a carotenoid/chlorophyll ratio which is significantly higher than in the WT. Subsequent 377

HPLC analysis of the carotenoid composition in transformants P3, P11 and WT 378

illuminated for 1h with strong light, revealed for both transformant a significant increased 379

of lutein, zeaxanthin and β-carotene levels. 380

In addition, it was investigated whether the phytoene desaturation is a rate-381

limiting step for astaxanthin synthesis. Therefore, the transformants were grown for 3d 382

under low light conditions, then exposed to continuous high light illumination and 383

astaxanthin accumulation determined. In a time course, transformant P3 showed a visible 384

red phenotype after 8h of high light exposure whereas the other transformants and the 385

WT still remained green (Fig. 5). Quantification of astaxanthin from the two 386

transformants P3 and P11 and the WT cells after 48 h of high light illumination 387

confirmed that high light leads to enhanced astaxanthin levels in transformant P3 (11.4 ± 388

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0.9 mg / g [dry weight]), whereas the levels in the WT (8.6 ± 1.4 mg / g [dry weight]) and 389

in transformant P11 (8.4 ± 1.6 mg / g dry weight) were 26% lower. 390

Chlorophyll fluorescence was determined with dark-adapted H. pluvialis WT and 391

transformants. The time course of non-photochemical quenching (NPQ) is shown in Fig. 392

6. WT cells reached a maximum value of 0.38 after 70 seconds. Transformants P3 and 393

P11 reached their maxima after the same time. However, the NPQ value was almost 2-394

fold higher for both. 395

396

DISCUSSION 397

398

The development of a transformation system depends on the availability of suitable 399

strong promoters, termination signals and the choice of promising reporter or resistance 400

genes. At present, there are no appropriate genetic tools available from H. pluvialis. The 401

pds/crtP gene from plants, algae and cyanobacteria is susceptible to the herbicide 402

norflurazon and four mutations in this enzyme from the cyanobacteria Synechoccocus sp. 403

PCC 7942 are known to acquire resistance (8). Since alignments of the amino acid 404

sequence of CrtP/Pds from Synechococcus sp. and H. pluvialis revealed a high sequence 405

similarity within the areas where the mutations were found, we followed a direct genetic 406

approach exchanging Leu504 to Arg in the phytoene desaturase from H. pluvialis (Fig. 407

1A). By in vitro enzyme analysis, it was shown that the engineered PDS-L504R was still 408

active, and exhibited a 43-fold higher resistance towards norflurazon compared to the 409

WT enzyme (Fig. 2). This decrease of norflurazone susceptibilty was sufficient for 410

selection of H. pluvialis transformed with the mutated pds gene. 411

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After biolistic transformation of H. pluvialis and following selection on 412

norflurazon containing medium, the integration of the finally used transformation vector 413

pPlat-pds-L504R by Southern blot analysis was examined (Fig. 3). Using a pds cDNA 414

probe all transformants revealed additional copies of the pds gene within the nuclear 415

genome except the WT. For the 11 transformants that were analyzed is not fully 416

understood whether the transforming DNA was linked to the pds locus by homologous 417

recombination or the integration was due to heterologous recombination events within in 418

the genome. It was estimated for C. reinhardtii that homologous recombination events 419

take place at a ratio of 1:100 for a mutated protophorphyrinogen oxidase gene (ppx1) 420

when the biolistic method is used (31). A homologous recombination event by a single 421

crossover should result in a 6.4 kb and an 8.11 kb band in the Southern blot using the pds 422

cDNA probe. A homologous recombination event by a double crossover should lead to a 423

loss of the vector backbone and therefore the ampicillin resistance cassette. It is difficult 424

to estimate the correct size of the different bands that hybridize with the pds cDNA and 425

the ampicillin gene probe. Transformant 2 shows signals that could match this 426

assumption, but in general strong signals were found at the vector size of 8.7 kb. It is 427

more likely that the transforming DNA undergoes complex rearrangement and 428

concatemer formation before integration, resulting in complex tandem array of pPlat-pds-429

L504R DNA that is stable after integration into the genome. This has previously been 430

reported for integration of transgenes into the genome of the green alga Volvox carteri 431

that is taking place as tandem repeats due to homologous recombination events of the 432

plasmids forming circular concatemeric structures prior the integration into the genome 433

(1, 14). Interestingly, the transformants 5, 6, 10, 11 show very strong signals at the 8.7 kb 434

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position, matching the vector size of 8.74 kb. To exclude that the intact plasmid was 435

maintained, the genomic DNA of these four transformants and the WT was restriction 436

digested with BstBI. This restriction enzyme does not cut the vector sequence. Using the 437

pds hybridization probe, the endogenous pds gene was detected in all transformants and 438

the WT H. pluvialis strain at a size of 9.4 kb (data not shown). The four transformants 439

show additional copies of the engineered pds -L504R gene with sizes about 23 kb and 440

larger (data not shown). 441

The changed expression level of the pds gene under standard growth conditions is 442

not linked to stress induction as shown by the bhy gene expression (Fig. 4). It is more 443

likely that the altered expression of the pds gene is due to multiple copies of the gene in 444

the genome of the transformants. Interestingly, the strength of expression is somehow 445

linked to the copy number of the transgene but there seem to be additional positional 446

effects. The integration locus of the introduced DNA in the genome seems to be an 447

important factor in determining the transgenic pds gene expression. Western blot analysis 448

revealed that pds gene transcript and protein level matched their degree of expression. 449

This result indicates that under standard growth conditions there is no posttranscriptional 450

regulation of the pds gene expression. 451

Furthermore, the analysis of total pds gene transcripts was performed for the WT 452

strain and the transformants P3 and P11. The two transformants showed a mixture of WT 453

and transgene transcripts indicating that the promoter is sufficient to drive transgenic pds-454

L504R gene expression and the endogenous pds gene is still intact. 455

The transformants were not only analyzed for transcription and protein expression 456

but also for possible effects of increased phytoene desaturase levels on carotenoid 457

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metabolism. Carotenoid analysis of transformants P3, P11 has shown that total carotenoid 458

concentration was higher in P11 on a dry weight basis whereas this value was lower for 459

P3 (Table 1). Since the chlorophyll content was also lower, a pleiotropic effect on the 460

chloroplast can be assumed. Related to chlorophyll, total carotenoids are also increased 461

over the wild type. Both transformants synthesize higher levels of zeaxanthin and lutein, 462

as compared to the WT (Table 1). This is in accordance with findings that the 463

heterologous expression of a bacterial phytoene desaturase in tobacco changed the 464

composition of leaf carotenoids (27) and the carotenoid formation in tomato towards β-465

carotene at the expense of lycopene (32). Under light stress, the transformant P3 showed 466

an enhanced accumulation of astaxanthin that reached 26% higher levels after 48 h of 467

high light exposure as compared with the WT and transformant P11 (Fig. 5). All our 468

results indicate that the phytoene desaturating step is rate limiting for carotenoid 469

synthesis in the chloroplast of H. pluvialis under high light conditions. The degree of 470

non-photochemical quenching is related to the zeaxanthin content and the mount of 471

zeaxanthin relative to all xanthophyll cycle carotenoids calculated by the Z/(Z+A+V) 472

ratio (2). These zeaxanthin related parameters were both increased in transformants P3 473

and P11 (Tab. 1). In accordance with the higher zeaxanthin concentration, NPQ values 474

were almost 2-fold higher in the transformants (Fig 6). Consequently, NPQ measurement 475

may be used as a convenient screening procedure for transformants obtained with the 476

vector pPlat-pds-L504R. A video imaging of chlorophyll fluorescence has been proved 477

successful to detect Chlamydomonas xanthophyll cycle mutants (30). The results reported 478

here clearly demonstrate that the mutated pds gene can be used as dominant selective 479

marker for stable nuclear transformation of H. pluvialis. Thus, our transformation vector 480

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pPlat-pds-L504R (Fig. 1C) resembles a basic tool for the genetic modification of this 481

alga. In addition, we report for the first time a specific genetic engineering of the 482

carotenoid biosynthesis pathway leading to increased carotenoid biosynthesis and an 483

accelerated accumulation of astaxanthin in H. pluvialis. The presented work resembles a 484

proof of concept for the genetic engineering of the carotenoid biosynthetic pathway in H. 485

pluvialis towards increasing astaxanthin production. 486

487

ACKNOWLEDGMENTS 488

This work was only possible due to the generous support from Prof. Dr. I. Adamska, 489

University of Konstanz, Germany and the Peter and Traudl Engelhorn Stiftung. We are 490

grateful to R. Miller-Sulger for excellent technical assistance and to Dr. H. Linden for 491

assistance in the preparation of the manuscript. Due thanks are expressed to Dr. C. 492

Hagen, University of Jena, Germany for the gift of the Pds-antibody and to Prof. Dr. P. 493

Kroth, University of Konstanz, Germany for the use of the Biolistic PDS-1000/He 494

system. 495

496

497

498

499

500

501

502

503

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505

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37. Steinbrenner, J., and H. Linden. 2001. Regulation of two carotenoid 619

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38. Steinbrenner, J., and H. Linden. 2003. Light induction of carotenoid 623

biosynthesis genes in the green alga Haematococcus pluvialis: regulation by 624

photosynthetic redox control. Plant Mol. Biol. 52:343-356. 625

39. Steiger, S., L. Schaefer, and G. Sandmann. 1999. High-light upregulation 626

of carotenoids and their antioxidative properties in the cyanobacterium 627

Synechocystis PCC 6803. J. Photochem. Photobiol. B 521:14-18. 628

40. Sun, Z., F. X. Cunningham, and E. Gantt. 1998. Differential expression of two 629

isopentenyl pyrophosphate isomerases and enhanced carotenoid accumulation in a 630

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J. Appl. Phycol. 14:497-500. 634

635

636

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637

638

639

640

641

642

643

644

645

646

LEGENDS TO FIGURES 647

648

Fig. 1: Comparison of phytoene desaturase CrtP from Synechococcus sp. PCC 7942 649

including the four known amino acid exchanges and their resistance factors (RF) against 650

the bleaching herbicide norflurazon with the Pds from H. pluvialis (A). The ChloroP 651

program identified a chloroplast transit peptide (TP) at the N-treminus. The modified 652

codon in position 504 of the Pds from H. pluvialis, leading to an amino acid exchange 653

from leucine to arginine, corresponds to codon 436 in the CrtP from Synechococcus sp. 654

Intron and exon structure of the pds gene, the promoter sequence is indicated by the grey 655

filled box, the exon sequences by black filled boxes and the intron sequences by thin lines 656

(B). Map of H. pluvialis transformation vector pPlat-pds-L504R with indicated restriction 657

sites (C). The engineered pds gene (pds-L504R) is inserted into the NaeI site of the vector 658

pBluescript SK(-). The construct also contains the ampicillin resistance gene and the 659

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Escherichia coli origin of replication (ColE1) and a multiple cloning site (MCS). The 660

sequence of this vector has been deposited at the Genebank (accession number 661

DQ404589). 662

663

Fig. 2: Dixon plot of the reciprocal in vitro phytoene to ζ-carotene conversion versus 664

increasing concentrations of the inhibitor norflurazon of a recombinant WT Pds (■) and 665

Pds Mut (▲) of H. pluvialis. The ki values for norflurazon inhibition were calculated 666

from the intercepts with the x-axis to be 0.14 µM and 5.98 µM for the heterologous 667

expressed Pds WT and Pds Mut, respectively. RF, Resistance factor. 668

669

Fig. 3: Southern blot analysis of H. pluvialis transformants P1-P11 and H. pluvialis wild 670

type (WT). DNA from transformants and WT was digested with XbaI and XhoI and 671

electrophoresed on a 0.8% agarose gel. For detection, a pds-specific cDNA probe (A) or 672

a specific probe against the ampicillin resistance cassette (B) was used. The arrow marks 673

the 5.78 kb XbaI/XhoI fragment containing endogenous pds gene. Numbers on the left 674

correspond to labeled λHindIII fragments used as size markers (M). 675

676

Fig. 4: Transcript analysis of phytoene desaturase gene (pds) and carotenoid hydroxylase 677

gene (bhy) in wild type H. pluvialis cells after 0, 18 and 36 h of high light and in 678

transformants P1-P11 under low light conditions (A). For comparison, total RNA (rRNA) 679

was stained with ethidium bromide. Western analysis of phytoene desaturase protein 680

(Pds) levels (B). 681

682

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683

Fig. 5: Astaxanthin formation after exposition of H. pluvialis WT (■) and the 684

transformants P3 (●) and P11 (▲) to continuous high light. 685

686

Fig. 6: Kinetics of non-photochemical quenching (NPQ) of dark-adapted H. pluvialis 687

wild type (WT) (■) and the transformants P3 (●) and P11 (▲). 688

689

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Table 1 690

Pigment content of green Haematococcus pluvialis cells treated for 1h with strong light 691

692

WT P3 P11 693

---------------------------------------------------------------------------------------------- 694

Total carotenoids (mg/g dw)a 2.35+0.24 2.65+0.30 3.00+0.28 695

Chlorophylls (mg/g dw)a 31.72+2.41 26.28+3.47 31.32+2.40 696

697

Car/Chl. (%) 7.4 10 9.6 698

699

Carotenoid composition (µg/g dw) 700

Neoxanthin 37+6 36+5 18+4 701

Violaxanthin 79+1 76+2 65+7 702

Antheraxanthin 91+4 90+6 55+3 703

Lutein 1464+97 1596+36 1920+99 704

Zeaxanthin 142+18 202+20 214+11 705

ß-Carotene 532+46 648+30 728+84 706

707

V+A+Zb 312 368 334 708

Z/(V+A+Z) 0.46 0.55 0.64 709

---------------------------------------------------------------------------------------------- 710

asimilar total carotenoid and chlorophyll concentrations prior to high light illumination; 711

bV+A+Z is the sum of the xanthophyll cycle carotenoids violaxanthin, antheraxanthin 712

and zeaxanthin. 713

714

715

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