Integration of IGV into the cBioPortal

ITCR collaborative set-aside, progress update

The IGV-cBioPortal Integration Team

http://cbioportal.org

IGV + cBioPortal history

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Live Demo (if possible)

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Note: these features are still under development and will be released to cbioportal.org when they are ready.

Cohort-wide copy-number (10k samples)

Zoom into chr9

Zoom on CDKN2A

Sort

Subset selection(AR-amp prostate mets)

Copy number view of the subset

Gene search

Download seg file

Query

Study focality of CN alterations

Copy numberin patient view

Zoom on gene

Remaining work

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