June 2, 20151 Combinatorial methods in Bioinformatics: the haplotyping problem Paola Bonizzoni DISCo Università di Milano-Bicocca.
D. Gusfield, V. Bansal (Recomb 2005) A Fundamental Decomposition Theory for Phylogenetic Networks and Incompatible Characters.
Computing close bounds on the minimum number of recombinations Dan Gusfield UCD Y. Song, Y. F. Wu, D. Gusfield (ISMB2005) D. Gusfield, D. Hickerson (Dis.
Haplotyping via Perfect Phylogeny Conceptual Framework and Efficient (almost linear-time) Solutions Dan Gusfield U.C. Davis RECOMB 02, April 2002.
Haplotyping via Perfect Phylogeny: A Direct Approach Dan Gusfield CS, UC Davis Joint work with V. Bafna, G. Lancia and S. Yooseph.
Reconstructing Ancestral Recombination Graphs - or Phylogenetic Networks with Recombination
Phylogenetic Networks of SNPs with Constrained Recombination D. Gusfield, S. Eddhu, C. Langley.
Algorithms for estimating and reconstructing recombination in populations Dan Gusfield UC Davis Different parts of this work are joint with Satish Eddhu,
