Pairwise Sequence Alignment BMI/CS 576 Colin Dewey [email protected] Fall 2010.
Profile HMMs for sequence families and Viterbi equations Linda Muselaars and Miranda Stobbe.
Connection Between Alignment and HMMs. A state model for alignment -AGGCTATCACCTGACCTCCAGGCCGA--TGCCC--- TAG-CTATCAC--GACCGC-GGTCGATTTGCCCGACC IMMJMMMMMMMJJMMMMMMJMMMMMMMIIMMMMMIII.
Proteins, Pair HMMs, and Alignment. CS262 Lecture 8, Win06, Batzoglou A state model for alignment -AGGCTATCACCTGACCTCCAGGCCGA--TGCCC--- TAG-CTATCAC--GACCGC-GGTCGATTTGCCCGACC.
EVOLUTIONARY HMMS BAYESIAN APPROACH TO MULTIPLE ALIGNMENT Siva Theja Maguluri CS 598 SS.
