Parallel DNA Sequence Alignment
Segment Alignment (SEA) Yuzhen Ye Adam Godzik The Burnham Institute.
Key idea: SHM identifies matching by incrementally shifting the read against the reference Mechanism: Use bit-wise XOR to find all matching bps. Then use.
Rnaseq forgenefinding
Basics of bioinformatics
Thomas Jellema & Wouter Van Gool 1 Question. 2Answer.
Feature Based Image Mosaicing Satya Prakash Mallick.
1 Aligning Multiple Genome Sequences With the Threaded Blockset Aligner Blanchette, W., Kent, W.J., Riemer, C., Elnitski, L., Smit, A.F.A., Roskin, K.M.,
. Computational Genomics Lecture #2 This class has been edited from Nir Friedman’s lecture which is available at nir. Changes made by.
Biostatistics-Lecture 17 Single nucleotide polymorphism detection—an introduction Ruibin Xi Peking University School of Mathematical Sciences.
Bioinformatics Alignment of pairs of sequence Local and global alignment Methods of alignment Dynamic programming approach Use of scoring matrices and.
Sequence analysis June 20, 2006 Learning objectives-Understand sliding window programs. Understand difference between identity, similarity and homology.
