Needleman-Wunsch and Smith-Waterman Algorithm
The Needleman Wunsch algorithm for sequence alignment
System approaches to the prediction of protein function Søren Brunak Center for Biological Sequence Analysis Technical University of Denmark [email protected].
Why Align Sequences? DNA sequences (4 letters in alphabet) – GTAAACTGGTACT… Amino acid (protein) sequences (20 letters) – SSHLDKLMNEFF… Align them so we.
Faculty of Computer Science Dalhousie University, Canada Andrew Rau-Chaplin, arc Parallel Computational Biochemistry.
Pairwise Sequence Alignment Sushmita Roy BMI/CS 576 Sushmita Roy [email protected] Sep 10 th, 2013 BMI/CS 576.
Clustal X
Prediction of protein function from sequence derived protein features
From ELMs to function: interaction networks and feature spaces
Bioinformatica
Hidden Markov Models, HMM’s Morten Nielsen, CBS, Department of Systems Biology, DTU.
Biological sequence analysis and information processing by artificial neural networks Søren Brunak Center for Biological Sequence Analysis Technical University.
