Search results for Gautier bosc2010 pythonbioconductor

Bioconductor with Python, What else ?ISMB / BOSCLaurent Gautier [[email protected]]DMAC / CBSJuly 10th, 20101 / 20Disclaimer This is not about the comparative merits of…

Dealing with the Data Deluge: What can the Robotics Community Teach us? Making our pipelines organic, adaptable, and scalable Darin London Part I. The Challenges of NextGen…

1. The Genome Analysis Toolkit A MapReduce framework for analyzing next-generation DNA sequencing data Ma#  Hanna  and  Mark  DePristo   Genome  Sequencing  and  Analysis…

1. THE GOBY FRAMEWORK: TOWARDS EFFICIENT NEXT-GENERATION SEQUENCING DATA ANALYSIS Nyasha Chambwe , Kevin C. Dorff, Marko Srdanovic,Xutao Deng, Stuart J.D. Andrews, Fabien…

1.Ronald Taylor, Ph.D. Computational Biology & Bioinformatics Group Computational Sciences & Mathematics Division Pacific Northwest National Laboratory (PNNL) Richland,…

1.Cloud Technologies and Their ApplicationsThe Bioinformatics Open Source Conference (BOSC 2010) Boston, MassachusettsJudy Qiuhttp://salsahpc.indiana.eduAssistant Director,…

1. BackgroundImplementation Software featuresExamplesSummary Evoker:A visualization tool for genotype intensity data James A. Morris 1 , Joshua C. Randall 2 , Julian B. Maller…

1.Community IntegrationDemocratization Biopython: challenges Brad ChapmanPeter Cock Biopython contributorshttp://biopython.org 10 July 2010 2. Community Integration Democratization…

1.BioRubyProject Update Raoul J.P. Bonnal co-authors: Toshiaki Katayama [email protected] Prins Life Science Informatics Mitsuteru Nakao Integrative Biology Program Fondazione…

1.Community-driven computational biology with Debian and TavernaSteffen Möller, Hajo Krabbenhöft (Lübeck) Alan Williams, Katy Wolstencroft, Carole Goble (Manchester)Andreas…

1. SeqWare Query Engine Storing & Searching Sequence Data in the CloudBrian O'ConnorUNC Lineberger Comprehensive Cancer CenterBOSC July 9th, 2010 2. SeqWare Query…

1. IPRStats: a Visualization Tool forInterProScan Iddo FriedbergMicrobiology and Computer Science & Software EngineeringMiami University http://github.com/devrkel/IPRStats.git…

1. The HDF Group BioHDF Open Binary File Formats for Next-Generation Sequencing Data Current Status and Future Directions Dana Robinson The HDF Group [email protected]…

1. Connecting TOPSAN to Computational AnalysisChristian M Zmasek, Kyle Ellrott, Dana Weekes, Constantina Bakolitsa, John Wooley, Adam GodzikJoint Center for Structural GenomicsSanford-Burnham…

1. The Microsoft Biology Foundation and its ApplicationsSimon MercerDirector for Health & WellbeingMicrosoft External Research 2. Microsoft External Research - Software…

1. Towards a federated microarray gene expression repository using MOLGENIS and MAGE-TABAlexandrosKanterakis, Tomasz Adamusiak, JuhaMuilu, Helen Parkinson, DespoinaAntonakaki,…

1. Mobyle Bioinformatics Web Portalproject updateHervé Ménager BOSC – July 9th, 2010 2. What is Mobyle? ● a bioinformatics analysis Web portal. ● provides an access…

1. Concurrent Bioinformatics Software FORDISCOVERING Genome-Wide Patternsand Word-based Genomic SignaturesJens Lichtenberg, Kyle Kurz, Xiaoyu Liang, Rami Al-Ouran, Lev Neiman,…

Musite: Prediction of ProteinMusite: Prediction of Protein Phosphorylation SitesPhosphorylation Sites Jianjiong Gao University of Missouri ColumbiaUniversity of Missouri,…

1. SNP Allele Designations (Bio::SNP::Inherit) Christopher Bottoms BOSC 2010 2. 5 million data “items” one CPU:2+ days eight CPUs: 1-2 days 3. SNP ID Sample ID Base1…