TABLE 1. LIST OF ALL PROTEINS IDENTIFIED SORTED BY GENE NAMEMembrane

FractionProbability

score GI Number Accession number Protein Name Entrez Gene Name # of Expts Peptides

SV 0.82 10947122 NP_064693.1 ATP-binding cassette, sub-family C, member 9 isoform SUR2B ABCC9 1 EVQM[147]GAVKKSSILIMDEATASIDMATENILQK

PM 0.99 21431817 P49597 Protein phosphatase 2C ABI1 (PP2C) (Abscisic acid-insensitive 1) ABI1 1 KEGKDPAAM[147]SAAEYLSKKEGKDPAAMSAAEYLSK

PM 0.82 231504 P30172 ACTIN 100,ACTIN 101 AC100 1 AVFPSIVGRPRAGFAGDDAPRVSPDEHPVLLTEAPLNPK

SV 1 4501853 NP_001598.1 acetyl-Coenzyme A acyltransferase 1 ACAA1 1 SITVTQDEGIRPSTTMEGLAKPM 0.86 4501855 NP_001084.1 acetyl-Coenzyme A carboxylase beta ACACB 1 VIQVENSHIILTGASALNK

M[147]TVPISITNPDLLRMTVPISITNPDLLREAISNMVVALK

SV 0.75 38505218 NP_115545.3 putative acyl-CoA dehydrogenase ACAD11 1 QHSMILVPMNTPGVKQHSM[147]ILVPM[147]NTPGVK

PM 1 113018 P08503 Acyl-CoA dehydrogenase, medium-chain specific, mitochondrial precursor (MCAD) ACADM 1 VPKENVLIGEGAGFKPM 0.99 4557237 NP_000010.1 acetyl-Coenzyme A acetyltransferase 1 precursor ACAT1 1 DGLTDVYNKSV 0.89 9998948 NP_064718.1 amiloride-sensitive cation channel 3 isoform c ACCN3 1 DNEETPFEVGIRPM 1 7662238 NP_055792.1 apoptotic chromatin condensation inducer 1 ACIN1 1 VDRPSETKTEEQGIPR

CEAEEAEPPAATQPQTSETQTSHLSV 0.76 30089972 NP_004026.2 acyl-coenzyme A oxidase 1 ACOX1 1 EIGTHKPLPGITVGDIGPK

TSNHAIVLAQLITKPM 1 16445033 NP_443189.1 ACRC protein; putative nuclear protein ACRC 1 FAKIQIGLKVCDSADRSV 0.93 27477105 NP_055977.3 lipidosin ACSBG1 1 EVEPTSHMGVPR

MELPIISNAM[147]LIGDQRPM 0.7 3182886 O18499 ACTIN 1 ACT1 1 IKIIAPPER

AGFAGDDAPRGYSFTTTAERQEYDESGPSIVHRAIFPSIVGRPRQEYDESGPSIVHR

PM 0.85 113242 P14883 ACTIN II ACT2 1 EEYEDSGPSIVHRVSPEEHPVLLTEAPLNPK

PM 1 4501881 NP_001091.1 alpha 1 actin precursor ACTA1 1 EITALAPSTMKAGFAGDDAPR

PM+SV 1 4501883 NP_001604.1 alpha 2 actin ACTA2 2 IIAPPERKVAPEEHPTLLTEAPLNPKDSYVGDEAQSKDSYVGDEAQSKRYPIEHGIITNWDDMEKAGFAGDDAPRSYELPDGQVITIGNEREITALAPSTMKVGDEAQSKYPIEHGIITNWDDM[147]EKMQKEITALAPSTMKHQGVMVGMGQKDSYVGDEAQSKM[147]QKEITALAPSTM[147]KAVFPSIVGRPRM[147]QKEITALAPSTMKSGGTTMYPGIADRMQKEITALAPSTM[147]KVAPEEHPTLLTEAPLNPK

PM+SV 1 4501885 NP_001092.1 beta cytoskeletal actin ACTB 2 IIAPPERKVAPEEHPVLLTEAPLNPKGYSFTTTAER

DSYVGDEAQSKDSYVGDEAQSKRAGFAGDDAPRSYELPDGQVITIGNEREITALAPSTMKVGDEAQSKMQKEITALAPSTMKHQGVMVGMGQKDSYVGDEAQSKM[147]QKEITALAPSTM[147]KAVFPSIVGRPRM[147]QKEITALAPSTMKSGGTTMYPGIADRSFTTTAEREIVRMQKEITALAPSTM[147]KVAPEEHPVLLTEAPLNPK

PM+SV 1 4501887 NP_001605.1 actin, gamma 1 propeptide ACTG1 4 EITALAPSEITALAPSGILTLK IIAPPERKAVFPSIVGRPRMQKEITALAPSTMKSYELPDGQVITIGNERGYSFTTTAERAGFAGDDAPRM[147]QKEITALAPSTM[147]KM[147]QKEITALAPSTMKIKIIAPPERKIKIIAPPERALPHAILRSYELPDGQVITIGNERTTGIVMDSGDGVTHTVPIYEGYAVFPSIVGRPRQEYDESGPSIVHRDSYVGDEAQSKEITALAPSTM[147]KGILTLKIIAPPERK

PM 0.74 113284 Q00214 ACTIN, MUSCLE ACTM 1 QEYDESGPSIVHRAVFPLTVGRPREITALAPSTMKSK

PM+SV 1 4501891 NP_001093.1 actinin, alpha 1 ACTN1 3 TINEVENQILTRDAKLAILGIHNEVSKTINEVENQILTRYLDIPKDYETATLSEIKMLDAEDIVGTARPDEKGISQEQMNEFR

PM+SV 1 12025678 NP_004915.2 actinin, alpha 4 ACTN4 1 TINEVENQILTRDAKGISQEQMQEFRMLDAEDIVNTARPDEK

SV 1 5031573 NP_005712.1 ARP3 actin-related protein 3 homolog ACTR3 1 DREVGIPPEQSLETAKPM 0.75 47078295 NP_000013.2 adenosine deaminase ADA 1 RLNINAAKSSFLPEDEKSV 1 4557253 NP_001100.1 ADAM 8; a disintegrin and metalloproteinase domain 8 precursor ADAM8 1 GPQELVPTTHPGQPARPM 0.99 8923417 NP_060295.1 hypothetical protein FLJ20446 ADPRHL2 1 GGDTDTIATM[147]AGAIAGAYYGM[147]DQVPESWSV 0.82 4501967 NP_000674.1 alpha-2C-adrenergic receptor; alpha2-AR-C4 ADRA2C 1 M[147]ASPALAAALAVAAAAGPNASGAGERPM 0.97 416590 P32794 AFG2 protein AFG2 1 VVVIAATNRPNSVDPALRSV 0.65 31377758 NP_060127.2 aftiphilin protein isoform 1 AFTPH 1 AWSLVDSADNSEAIR

PPVPM 0.92 20140221 Q9BSE5 Agmatinase, mitochondrial precursor (AUH) AGMAT 1 GPGPGVGARPAAGLFHPGRRPM 0.78 4501993 NP_003650.1 alkylglycerone phosphate synthase precursor AGPS 1 TTSKASLNPSDTPPSVVNEDF

PM 0.9 41151826 XP_372195.1 PREDICTED: agrin AGRIN 1 GPAGCEADASAPATCAEM[147]RCEFGARFGALCEAETGR

PM 0.93 7662452 NP_056054.1 ATP\GTP binding protein 1 AGTPBP1 1 GPIVVPTAGEGTSGNSGNLRPM 0.99 10947054 NP_066187.1 ankyrin 2 isoform 2 AHK2 1 GDDMPEIPPETVTEEEYIDEHGHTVVKPM 1 7706457 NP_057332.1 A-kinase anchor protein 11 isoform 1 AKAP11 1 NVIPDTPPSTPLVPSRASSEWPM 0.75 21493045 NP_004265.3 A-kinase anchor protein 6 AKAP6 1 RVSENNGNGKPM 0.91 21431604 Q9ULX6 Neighbor of A-kinase anchoring protein 95 (Homologous to AKAP95) AKAP8L 1 GIPGLDVEDDEEGGGGAP

PM+SV 0.91 4502027 NP_000468.1 serum albumin precursor ALB 4 DLGEENFKKVPQVSTPTLVEVSRAEFAEVSKQTALVELVKLVAASQAALGLVPQVSTPTLVEVSRLVNEVTEFAKLVTDLTKRDAHKSEVAHRSEVAHRTPVSDR

SV 1 23503239 NP_699160.1 ALDEHYDE DEHYDROGENASE 16 FAMILY MEMBER A1 ALDH16A1 1 GAVEAAHQAFPGWAGQSPGARSV 1 4557305 NP_000025.1 aldolase A ALDOA 1 ADDGRPFPQVIK

IGEHTPSALAIMENANVLARIVAPGKGILAADESTGSIAKELSDIAHRIVAPGKGILAADESTGSIAKR

SV 0.85 40354205 NP_000026.2 aldolase B ALDOB 1 LDQGGAPLAGTNKSV 0.9 27436959 NP_055935.2 ALMS1 ALMS1 1 TGTPTVSSNSHSHSEK

PM+SV 0.65 15718675 NP_001620.2 arachidonate 5-lipoxygenase-activating protein ALOX5AP 3 TQSTPGYIFGKTGTLAFER

PM 0.97 10198656 NP_065434.1 anti-Mullerian hormone receptor, type II AMHR2 1 AQVEMQGCRDSDEPGCESLHCDPSPRPM 0.68 22027646 NP_570899.1 angiomotin like 1 AMOTL1 1 PCQLPFPSTM[147]QQHSPM[147]SSQTSSASGPLPM 0.87 33302598 O76262 Alpha-amylase-related protein precursor AMYREL 1 DMGSVLNYKSPRQYKSV 0.99 10947036 NP_065208.1 ankyrin 1 isoform 4 ANK1 1 ELQFSVEDINR

ISEILLDHGAPIQAKPM 0.92 32967599 NP_001140.2 ankyrin 3 isoform 2 ANK3 1 LIIEETKPCVPVSM[147]KPM 0.9 51466429 XP_380018.2 ankyrin repeat and IBR domain containing 1 ANKIB1 1 EENILAGEAASQAGDSGNEAANR

FHDMNPQSIALIPPATTEISADSQLSV 0.82 38683807 NP_115593.3 ankyrin repeat domain protein 17 isoform a ANKRD17 1 SSSANSKIGSSAPTTTAANTSLM[147]GIK

TDEM[147]HTALMEACM[147]DGHVEVARKSDNHSPAVVTTTVSSKVIGRGGCNINAIR

PM 0.72 24233530 NP_710181.1 ankyrin repeat domain 44 ANKRD44 1 SEEAVQVLIKHSADVNARPM 0.67 41195096 XP_048747.4 ankyrin repeat domain 50 ANKRD50 1 MLAMSYTCQAK

STKASKGGKPM+SV 0.88 4502095 NP_001141.1 aminopeptidase N ANPEP 4 AQIINDAFNLASAHK

DNEETGFGSGTRDHSAIPVINRALEQALEKVVATTQM[147]QAADARNLASAHKSIQLPTTVREATDVIIIHSK

SV 1 4502101 NP_000691.1 annexin I (lipocortin I) ANXA1 1 TPAQFDADELRGVDEATIIDILTKR

SV 0.97 22165433 NP_665876.1 annexin A11; annexin XI ANXA11 1 DAQELYAAGENRGVGTDEACLIEILASR

PM 0.8 4502111 NP_001147.1 annexin VII isoform 1 ANXA7 1 GFGTDEQAIVDVVANRSNDQRPM 1 14210504 NP_115882.1 clathrin coat assembly protein AP47 AP1M1 1 ELEEESIR

LETGAPRPM 1 22035548 NP_001154.2 amyloid beta A4 precursor protein-binding, family A, member 1 APBA1 1 QAPAGQQRAVGPAGGGEAGQRYSV 0.68 22035550 NP_005494.2 amyloid beta A4 precursor protein-binding, family A, member 2 APBA2 1 IIEINGQSVVATAHEKPM 0.76 5031587 NP_005874.1 adenomatosis polyposis coli 2 APC2 2 GLGVEDATPSSSSENYVQETPL

AIQEGANSIVTWLHQAAAATRVAAPGTTWRM[147]IAM[147]GSAAALRGVEDATPSSSSENYVQETPLVL

PM 0.82 4885065 NP_005157.1 amyloid beta (A4) precursor-like protein 1 APLP1 1 RGVEYVCCPPPGTPDPSGTAVGDPSTRPM 0.8 24211473 Q9D7N9 Adipocyte plasma membrane-associated protein (Protein DD16) APMAP 1 VVKLENGEIETIARPM 0.86 4502153 NP_000375.1 apolipoprotein B precursor; apoB-100; apoB-48 APOB 2 QANAQLSNPK

HKLIDVISMYRELLKPM+SV 1 8922079 NP_061160.1 apolipoprotein B48 receptor APOB48R 2 QAQVLGTERTEEAAESQTAGR

GAESEWTWHGETEGKPM+SV 0.91 4557325 NP_000032.1 apolipoprotein E3 APOE 2 GEVQAMLGQSTEELR

SV 0.72 40548322 NP_954976.1 similar to Rho GTPase activating protein 12 ARHGAP27 1 VIEHGEQNRMSVQSVAIVFSV 0.89 10835002 NP_001166.1 Rho GDP dissociation inhibitor (GDI) beta ARHGDIB 1 TLLGDGPVVTDPKPM 1 21264565 NP_006006.3 AT rich interactive domain 1A (SWI- like) isoform a ARID1A 1 SPGVSTSGISSSQGEQSNPAQSPFSPHTSPHL

PM+SV 0.93 22035679 NP_112739.2 AT rich interactive domain 4B (RBP1- like) isoform 2 ARID4B 3 GTNSSDSEELSAGESITKGTNSSDSEELSAGESITK

PM 1 5453704 NP_006398.1 ADP-ribosylation-like factor 6 interacting protein 5 ARL6IP5 1 TPMGIVLDALEQQEEGINRSV 0.82 8922601 NP_060654.1 ADP-ribosylation factor-like 10C ARL8B 1 IWDIGGQPR

GVNAIVYM[147]IDAADRGVNAIVYMIDAADR

PM 1 5174393 NP_006001.1 arginine-rich protein ARMET 1 DVTFSPATIENELIKSV 0.94 5031601 NP_005711.1 actin related protein 2\3 complex subunit 1B ARPC1B 1 CSQFCTTGMDGGM[147]SIWDVK

ASSEGGTAAGAGLDSLHKSV 1 13569956 NP_112240.1 actin related protein 2\3 complex, subunit 5 ARPC5L 1 PTENSSAVLLQWHEKPM 0.89 40217847 NP_054733.2 U5 snRNP-specific protein, 200-KD ASCC3L1 2 EEASDDDM[147]EGDEAVVRPM 0.76 26080431 NP_079133.3 chromosome fragility associated gene 1 ATAD5 2 GIDSDDVQDNSQLK

SGYISESENSEISQQVRSTNATNSNVKDVGAEEPSRITGPTGVGKTAAVYACAQELMVGVLAMAAAAAPPPVKDVGAEEPSRKLNTSTKQMENTTSHANSRNNSSGIKAESEASLLNVSTPK

PM 1 19923287 NP_008816.2 AT-binding transcription factor 1 ATBF1 1 SVLHQTKQSPTGSDSGSVQEDSGSEPK

PM 0.99 51468832 XP_058426.7 ATG16 autophagy related 16-like 2 ATG16L2 1 ESAAMAGPGVPGAPAARGPHCTQVIPVQGR

PM 0.82 17370591 Q9GKS6 Potential phospholipid-transporting ATPase VD ATP10D 1 DVSAETLM[147]QLPELYKPM 0.85 51471472 XP_085028.4 ATPase, Class VI, type 11A isoform a ATP11A 1 YPDNR

TGTLTENNM[147]EFKNSDYAIPK

PM 0.81 22748667 NP_689509.1 Na+\K+ -ATPase alpha 3 subunit ATP1A3 1 GVGIISEGNETVEDIAARPM 0.96 4502281 NP_001670.1 Na+\K+ -ATPase beta 3 subunit ATP1B3 1 IIGLKPEGVPRSV 1 28373105 NP_777613.1 sarco\endoplasmic reticulum Ca2+ -ATPase isoform e ATP2A3 1 HFSVTAEGGLSPAQVTGAR

AVGVAVATGLHTELGKPM 0.79 4502287 NP_001673.1 ATPase, Ca++ transporting, plasma membrane 1 ATP2B1 1 GGQVIQIPVADITVGDIAQVK

PM+SV 1 4757810 NP_004037.1 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit isoform a prec ATP5A1 2 VLSIGDGIARTSIAIDTIINQKRTGTAEMSSILEERVVDALGNAIDGKAPGIIPR

TGTAEM[147]SSILEERISEQSDAKAPGIIPRAVDSLVPIGRVVDALGNAIDGKGPIGSKILGADTSVDLEETGRTSIAIDTIINQKNVQAEEM[147]VEFSSGLKTGAIVDVPVGEELLGRGIRPAINVGLSVSR

SV 1 32189394 NP_001677.2 ATP synthase, H+ transporting, mitochondrial F1 complex, beta subunit precursor ATP5B 3 VLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKIMDPNIVGSEHYDVARAIAELGIYPAVDPLDSTSRLVLEVAQHLGESTVRIM[147]NVIGEPIDERIPVGPETLGRIGLFGGAGVGK

PM 0.9 4502297 NP_001678.1 ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit precursor ATP5D 1 IEANEALVKPM 0.73 6005717 NP_009031.1 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit e ATP5I 1 ELAEDDSILKPM 0.99 29568101 NP_006467.3 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g ATP5L 1 VELVPPTPAEIPR

GIIGYDVSV 0.9 17136148 NP_001174.2 ATPase, H+ transporting, lysosomal accessory protein 1 precursor ATP6AP1 1 EVLTGNDEVIGQVLSTLSV 0.77 4502313 NP_001685.1 ATPase, H+ transporting, lysosomal, V0 subunit c ATP6V0C 1 AIGIVGDAGVR

PM+SV 1 19913424 NP_001681.2 ATPase, H+ transporting, lysosomal 70kD, V1 subunit A, isoform 1 ATP6V1A 2 EASIYTGITLSEYFRVGSHITGGDIYGIVSENSLIK

PM 0.74 5031697 NP_005594.1 ATPase, Class I, type 8B, member 1 ATP8B1 1 DSETTFDEDSQPNDEVVPYSDDETEDELPM 0.79 41327760 NP_940933.3 ATPase, Class II, type 9B ATP9B 1 QQHTGRRTCAIGDGGNDVSMIQAADCGIGIEGKPM 0.65 21687159 NP_660275.1 ATP binding domain 3; LOC90353 ATPBD3 1 RVGATHIVTGHNADDMAETVLMNFPM 0.92 7705927 NP_057395.1 ATPase inhibitory factor 1 isoform 1 precursor ATPIF1 1 EAGGAFGKR

GSDQSENVDRPM 0.73 7106299 NP_037368.1 ataxin 10 ATXN10 1 NLTEDNSQNQDLIAKPM 0.67 17864090 NP_056385.1 autism-related protein 1 AUTS2 1 EGHLPEK

PPAVSGIPPMIPPTGPFGSLQGAFSV 0.79 4757824 NP_004646.1 axin 2 AXIN2 1 EDAPRPPVPGEEGETPPCQPGVGKPM 0.89 51474428 XP_045581.7 PREDICTED: 5-azacytidine induced 1 AZI1 1 AWSPPGPPEAGPGPAGRSV 1 4757826 NP_004039.1 beta-2-microglobulin precursor B2M 1 VNHVTLSQPKSV 1 40789265 NP_848632.2 beta1,4-N-acetylgalactosaminyltransferases IV B4GALNT4 1 EEGDEDEEDEVQRR

VGDADGESPEPAPAASVRSV 0.79 4502351 NP_001692.1 amino acid N-acyltransferase BAAT 1 M[147]IQLTATPVSALVDEPVHIR

MIQLTATPVSALVDEPVHIRSV 0.84 4502353 NP_001177.1 BTB and CNC homology 1 BACH1 1 EDSSVASSDRSSVER

CDESKLAMEPEETKPM 0.8 32171238 NP_061330.2 insulin receptor tyrosine kinase substrate BAIAP2L1 1 TPASTPVSGTPQASPM[147]IERSNVVR

IGEIATGSPVSTELGHVLPM+SV 1 30795231 NP_006308.3 brain abundant, membrane attached signal protein 1 BASP1 4 AAEAAAAPAESAAPAAGEEPSKEEGEPK

AQGPAASAEEPKPVEAPAANSDQTVTVKEAEGAATEEEGTPKKTEAPAAPAAQETKAEPPKAPEQEQAAPGPAAGGEAPKESEPQAAAEPAEAKSDGAPASDSKPGSSEAAPSSKGYNVNDEKDAAAAKEEAPKKAEGAATEEEGTPKETPAATEAPSSTPKTEAPAAPAAQETK

EEGEPKKTEAPAAPAAQETKPM 0.67 4502369 NP_003977.1 gamma-butyrobetaine hydroxylase BBOX1 1 M[147]NPGDVITFDNWRPM 0.91 1705725 P51572 B-cell receptor-associated protein 31 (p28 Bap31) BCAP31 1 LDVGNAEVKLEEENRPM 0.73 20336330 NP_619580.1 BCL2-like 12 isoform 1 BCL2L12 1 LASDPALRPM 0.91 32698936 NP_872363.1 B-cell CLL\lymphoma 9-like BCL9L 1 RDRSVSVDSGEQR

STPSAGTPQSQPPPLPPPPPPAPGSAPPALSV 0.96 21281669 NP_060899.1 transcription factor-like nuclear regulator BDP1 1 ESPRPPEPATDSASKPAEPTDVPTVDF

EISPQENGPEEVKPVGKPM 0.7 21735417 NP_056065.1 bicaudal D homolog 2 isoform 2 BICD2 1 ADGGTGDSSPSPGSSLPSPLSDPRSV 0.88 4557361 NP_001187.1 BH3 interacting domain death agonist (BID) isoform 2 BID 1 LGRIEADSESQEDIIRPM 0.72 7705296 NP_057271.1 bridging integrator 2 BIN2 1 DLKNFLSAVKVM[147]HESSK

TSAPPSRPPPPRATASPRPM 1 4502423 NP_001193.1 bone morphogenetic protein 2B BMP4 1 WETFDVSPAVLRWTRSV 0.66 15147240 NP_150279.1 brother of CDO BOC 1 IMPSGNLQIVNASQEDEGM[147]YK

PM+SV 0.87 4502447 NP_001716.1 bactericidal\permeability-increasing protein precursor BPI 2 HSNIGPFPVELLIKIPDYSDSFGFPLPTPAR

SV 1 38788274 NP_872579.2 fetal Alzheimer antigen isoform 1 BPTF 1 SNGELSESPGAGKGASGSTRYRLQTVKSLAGVSLMLR

SV 0.69 6552319 NP_009235.1 breast cancer 1, early onset isoform BRCA1 BRCA1 1 APESARVGNIPSSTSALKPM 0.97 4502451 NP_000050.1 breast cancer 2, early onset BRCA2 1 QNNIEM[147]TTGTFVEEITENY

HVIMNAPSIGQVDSSKQFEGTVEIKNAGLISTLKEENTAIR

PM 1 543883 P35613 Basigin precursor (Leukocyte activation antigen M6) BSG 1 GGVVLKEDALPGQKPM 0.92 4508019 NP_003449.1 bassoon BSN 2 PPGGAGPGPGPGPGPGAGKPPSAPAGGGQL

EEPLPTTTPAAIKPPPTSQQPPVGAPHRASGTSPLKSMADAAPPGQSSSPFYGPRM[147]SVQPEADTQGQPAPSKGTPKAEQTNGSKGTAKAPQQGR

SV 0.9 4757874 NP_004325.1 bone marrow stromal cell antigen 1 precursor BST1 1 DIFLGRPM 1 1175932 P43573 Hypothetical 91.4 kDa protein in STE2-FRS2 intergenic region BUD27 1 EPTINDIVEKEPEINSKPM 0.66 4758956 NP_004749.1 peripheral benzodiazepine receptor-associated protein 1 BZRAP1 1 GQQASSSGPACQR

AESEGPAQPCPGPPKDYDPVSM[147]SPNPDAGEEELPF

PM 0.95 31543191 NP_115709.2 chromosome 10 open reading frame 58 C10orf58 1 M[147]IKPQTLASEKNGAVIM[147]AVR

SV 0.91 21450743 NP_659454.1 IIIG9 protein C11orf66 1 QQQGQDPLERSV 0.99 11024686 NP_060634.1 hypothetical protein FLJ10637 C12ORF11 1 KPLVEM[147]DETPQVEK

IDGSLEVPLERPM 0.99 41281612 NP_115812.1 chromosome 13 open reading frame 8 C13orf8 1 DAM[147]DIKGQESSSDQEQVDVESIDFSKSV 0.74 40255045 NP_060506.4 chromosome 14 open reading frame 103 C14orf103 1 GAASSGTSTAM[147]AALELTNRPM 0.85 8922890 NP_060805.1 chromosome 14 open reading frame 131 C14orf131 1 DMDGEQLEGASSEKRSV 0.86 44890062 NP_919254.2 hypothetical protein LOC91748 C14orf43 1 YFNAIISTSTIPAPPPITPKPM 0.71 27312029 NP_758953.1 chromosome 14 open reading frame 50 C14orf50 1 M[147]YRVPEFYARPM 0.84 51493205 XP_290629.5 AHNAK nucleoprotein 2 isoform 1 C14orf78 1 VQAGQM[147]DVK

SIEASVDVSAPKSIEVSVDVSAPKSIEASVDVSEPKSIQASVDVSAPK

SV 0.92 32699050 NP_872422.1 hypothetical protein LOC348110 C15orf38 1 M[147]PESEMEVMELELGAGVRPM 0.93 31543195 NP_689472.2 leucine-rich repeat kinase 1 C15orf42 1 PDQSPPRNSM[147]PKAEEASSWSV 0.96 29825823 NP_085133.1 chromosome 17 open reading frame 28 C17orf28 1 LPLQTIM[147]RPM 0.97 41281957 NP_852147.1 chromosome 18 open reading frame 1 isoform alpha 2 C18orf1 1 GSLVCNQQNDCGDNSDEENCLPM 0.69 24308077 NP_056291.1 chromosome 18 open reading frame 10 C18orf10 1 GPSGPSGPSTSSTSKSV 0.97 19924161 NP_604431.1 RPB5-mediating protein isoform b C19ORF2 1 NTNVNAM[147]HQVTDSHTPCHK

SV 0.83 51459152 XP_114129.2 hypothetical protein LOC200159 C1orf100 1 MEGSPGLLGASVGQARM[147]EGSPGLLGASVGQAR

SV 0.72 30181238 NP_112196.2 N2,N2-dimethylguanosine tRNA methyltransferase-like C1orf25 1 ELAARIVVAAVARM[147]GAHYHCIICSATITR

SV 0.8 51459067 XP_371350.2 hypothetical protein LOC388753 C1orf31 1 RLVACVTVSSRSV 0.97 32698896 NP_872339.1 hypothetical protein LOC199990 C1orf86 1 APRVEQQPSVEGAAALRPM 0.97 4502491 NP_001203.1 C1q globular domain-binding protein C1QBP 1 VEEQEPELTSTPNFVVEVIKSV 0.85 30425498 NP_848635.1 C1q and tumor necrosis factor related protein 9 C1QTNF9 1 IGETLVLPKPM 0.71 18201878 NP_543011.1 chromosome 20 open reading frame 108 C20orf108 1 ISITLVSVPLIVR

STITSREIQTAVRPM 0.72 24308394 NP_543023.1 chromosome 20 open reading frame 151 C20orf151 1 PLPPPHPQPPPHPQPPDL

SPQALSNGTKPM+SV 0.88 24308201 NP_065392.1 chromosome 20 open reading frame 3 C20orf3 4 ENGEIETIAR

VVKLENGEIETIARDGSSFSGRPSSSGGYWVGM[147]STIRLSLQAVLENGEIETIARLGVLHPNTK

PM 0.87 9966825 NP_065089.1 HEF-like protein C20orf32 1 QGLAPANRPM 0.8 51475205 XP_097736.3 hypothetical protein LOC140862 C20orf82 1 GWAGAGEEEGRER

VRGGAAGGPEERWKDASGPK

PM 0.78 5031691 NP_004640.1 homolog of zebrafish ES1 isoform Ia precursor C21ORF33 1 GGAEVQIFAPDVPQMHVIDHTKSV 1 7657015 NP_055121.1 hypothetical protein HSPC117 C22orf28 1 GLGHQVATDALVAMEKSV 0.66 14150001 NP_115642.1 chromosome 2 open reading frame 16 C2orf16 1 RGHSSSGKTCHSPSERPM 0.88 4557385 NP_000055.1 complement component 3 precursor C3 1 EVVADSVWVDVK

SGIPIVTSPYQIHFTKPM 0.73 22749117 NP_689752.1 hypothetical protein FLJ32859 C3orf30 1 M[147]EEPPQEALAEPLK

PM+SV 1 4502509 NP_001727.1 complement component 5 receptor 1 C5AR1 4 NVLTEESVVRSTVDTMAQKEEYFPPKDTLDLNTPVDK

SV 0.94 31745172 NP_006772.2 chromosome 6 open reading frame 10 C6orf10 1 GSRHAYSTQSDTSCDNRDYTPSTNSLVSM[147]ASKTAGAMMQFTAPIPGATGPIK

PM+SV 0.99 42657539 XP_376556.1 hypothetical protein LOC55780 C6orf70 1 QMLIHLAKSV 0.65 47271471 NP_689947.2 hypothetical protein FLJ25357 C6orf89 1 HCQSVAMPIEPGDIGYVDTTHWKPM 1 21450761 NP_659467.1 hypothetical protein MGC22793 C7orf47 1 MMMGCGESELKSADGEEAAAVPGPPPEPQVPQLSV 0.65 12751497 NP_075568.1 hypothetical protein FLJ20989 C8orf33 1 M[147]AALGHLAGEAAAAPGPGTPCASRSV 0.95 24308464 NP_714918.1 chromosome 9 open reading frame 138 C9orf138 1 YQPASVR

PM+SV 1 11641247 NP_071738.1 chromosome 9 open reading frame 19 C9orf19 3 EAQQYSEALASTRASASDGSSFVVAR

SV 0.65 24432058 NP_116212.3 aminopeptidase O C9orf3 1 DGNHDNQEHASGISSSKELVTLPANR

PM 1 22749187 NP_689785.1 chromosome 9 open reading frame 98 C9orf98 1 TNAPFTPRVLLLGPVGSGKPM 1 115465 P22748 Carbonic anhydrase IV precursor CA4 1 DNVRPLQQLGQRPM 0.98 4502529 NP_000712.1 calcium channel, voltage-dependent, alpha 1E subunit CACNA1E 1 VDGVSYFR

SM[147]ERSSENTYM[147]YGMGPR

PM 1 4757894 NP_000713.1 calcium channel, voltage-dependent, alpha 2\delta subunit 1 CACNA2D1 1 VLKDAVNNITAKGITDYKPM 0.71 15149463 NP_149130.1 caldesmon 1 isoform 4 CALD1 1 LTKTPDGNK

M[147]QNDTAENETTEKEEKSESRPM+SV 1 4757900 NP_004334.1 calreticulin precursor CALR 2 NVLINK

QIDNPDYKAEEFGNETWGVTK

PM 1 39753970 NP_004336.2 cathelicidin antimicrobial peptide CAMP 1 AIDGINQR

SSDANLYRSV 0.69 29826341 NP_055914.2 calmodulin binding transcription activator 2 CAMTA2 1 QIIEATPERIKRSV 0.96 41144277 XP_371617.1 cullin-associated and neddylation-dissociated 2 CAND2 1 ATDLDQEVKERPM 1 10716563 NP_001737.1 calnexin CANX 2 AEEDEILNR

IPDPEAVKPDDWDEDAPAKGTAIVEAHDGHDDDVIDIEDDLDEDM[147]DGEWEAPQIANPRTGIYEEK

SV 1 5453595 NP_006358.1 adenylyl cyclase-associated protein 1 CAP1 1 ALLVTASQCQQPAENKAQINQGESITHALKVQVMGKVPTISINKFAQINQGESITHALK

PM 0.71 5453593 NP_006357.1 adenylyl cyclase-associated protein 2 CAP2 1 GLRHVTDDQKTYKSV 1 4502561 NP_001738.1 capping protein (actin filament), gelsolin-like CAPG 1 MQYAPNTQVEILPQGRPM 0.67 4557405 NP_000061.1 calpain 3 isoform a CAPN3 1 ELGVDQESEEGK

M[147]PTVISASVAPRPM 0.68 5453599 NP_006127.1 F-actin capping protein alpha-2 subunit CAPZA2 1 TITPSTTQVVGILKSV 0.99 18079216 NP_065815.1 CASK interacting protein 1 CASKIN1 1 AGTEPSLPQGSSSSGPSAPPEEIWVL

QVLPPGTSHFTPPQTPTKPM+SV 1 4557014 NP_001743.1 catalase CAT 3 NAIHTFVQSGSHLAAR

FSTVAGESGSADTVRDPRTTGAGNPVGDKLNVITVGPR

SV 0.79 4502603 NP_003646.1 chromobox homolog 4 CBX4 1 M[147]ELPAVGEHVFAVESIEKGPPNGMMPAPKEAVTGNGIGGKM[147]K

PM 1 31542530 NP_115645.3 hypothetical protein DKFZp434I099 CCDC135 1 LPISYKPM 0.97 32171244 NP_073579.2 coiled-coil domain containing 136 CCDC136 1 ESHFQEVLENPDDSKPM 0.93 7661844 NP_054727.1 coiled-coil domain containing 22, JM1 protein CCDC22 1 EPQAQATQVSDVPATSRRPEQVTWPM 0.81 33285013 NP_075054.2 coiled-coil domain containing 71 CCDC71 1 APNPTATSPPASAPRTAMRPM 0.77 27734727 NP_775889.1 coiled-coil domain containing 95 CCDC95 1 ENVDEDSSDSDATASSDNSETEGTPKLSDTPAPK

PM+SV 0.97 38455427 NP_006421.2 chaperonin containing TCP1, subunit 4 (delta) CCT4 2 M[147]PENVAPRSGATAGAAGGRGKVIDPATATSVDLRDIKMIQDGKGDVTITNDGATILKSILKIDDVVNTR

SV 0.99 24307939 NP_036205.1 chaperonin containing TCP1, subunit 5 (epsilon) CCT5 1 GVIVDKDFSHPQMPKPM 1 20141203 P08571 Monocyte differentiation antigen CD14 precursor CD14 1 RLTVGAAQVPAQLLVGALR

PM+SV 0.94 9966889 NP_065139.1 CD177 CD177 2 VSDLPRQIGIFSARGGGIFSNLR

PM 0.92 9966885 NP_065137.1 tumor endothelial marker 1 precursor CD248 1 QPGILSVSHSAQPPAHQPPM[147]ISTKYPM 0.65 11321634 NP_036252.1 CD2-associated protein CD2AP 1 LSTPSSASKANTTAF

GIGFGDIFKPM 0.99 33667072 NP_009192.1 leukocyte membrane antigen CD300A 1 AGDHSELSQNPKPM 0.73 4502655 NP_001763.1 CD33 antigen (gp67) CD33 1 FAGAGVTTERPM 0.95 21361193 NP_000601.2 CD44 antigen CD44 2 YGFIEGHVVIPR

LVINSGNGAVEDRPM 1 27502427 NP_758871.1 membrane cofactor protein isoform 12 precursor; CD46 antigen CD46 1 DPPVPK

ADGGAEYATYQTKPM 0.96 4502673 NP_001768.1 CD47 antigen isoform 1 precursor CD47 1 STVPTDFSSAKPM 0.77 38683836 NP_942088.1 CD47 antigen isoform 2 CD47 1 EGETIIELK

STVPTDFSSAKPM 0.96 10834972 NP_000551.1 CD53 antigen CD53 1 GLTDSIHRPM 0.98 4504813 NP_002222.1 CD82 antigen; R2 leukocyte antigen CD82 1 QEMGGIVTELIRPM 0.66 5032141 NP_005807.1 CD96 antigen isoform 2 precursor CD96 1 PNTTPQPSNSSMTTRGFNY

PM+SV 1 17978491 NP_510966.1 leukocyte antigen CD97 CD97 3 YSEFTSTTSGTGHNQTRTSSAEVTIQNVIK

PM 1 2500201 Q90694 cdc42 CDC42 1 NVFDEAILAALEPPEPKPM 0.72 30089960 NP_055641.3 CDC42-binding protein kinase alpha isoform A CDC42BPA 1 MEDGTVQSSVAVGTPDYISPEILQAMEDGK

EEIEKLRPM 0.72 51468727 XP_290516.4 CDC42 binding protein kinase gamma CDC42BPG 1 PASM[147]GSEGLGGDADPM[147]KRKPM 0.83 11067747 NP_001244.1 Cdc5-related protein CDC5L 1 AQDVLVQEM[147]EVVKQGM[147]SHGELSV 0.79 16950647 NP_443713.1 cyclin-dependent kinase 10 isoform 2 CDK10 1 LPISGVCEGCRPM 0.67 28872786 NP_060719.3 CDK5 regulatory subunit associated protein 2 CDK5RAP2 1 QNQALNAMLIKSV 0.68 28872792 NP_788276.1 CDK5 regulatory subunit associated protein 3 isoform b CDK5RAP3 1 CQQLQQEYSRPM 1 4507281 NP_003150.1 cyclin-dependent kinase-like 5 CDKL5 1 VRAKGLDGSLSIGQGM[147]AARPM 1 17981699 NP_523240.1 cyclin-dependent kinase inhibitor 2C CDKN2C 1 NEVVSLM[147]QANGAGGATNLQSV 0.81 19923195 NP_001703.2 carcinoembryonic antigen-related cell adhesion molecule 1 CEACAM1 2 TIIVTELSPVVAKPQIKPM 0.89 20455477 P40199 Carcinoembryonic antigen-related cell adhesion molecule 6 precursor (CD66c antigen) CEACAM6 1 EVLLLAHNLPQNRSV 1 21314600 NP_001807.2 carcinoembryonic antigen-related cell adhesion molecule 8 CEACAM8 2 LFIPNITTK

IIGYVISNQQITPGPAYSNRIIGYVISNQQITPGPAYSNR

SV 1 13325066 NP_001398.1 cadherin EGF LAG seven-pass G-type receptor 3 CELSR3 2 DAANNNQPDPALTSGDETSLGRNCLPGASGSGPELDSAPRDANSAISYQITGGNTRSATTM[147]VAVTVADRNDHSPVFFTGEDCELDTEAGRNCLPGASGSGPELDSAPR

SV 1 7661880 NP_055531.1 centaurin beta1 CENTB1 1 RAQEAEEAGAALRGAESLEAALTHNAEVPR

PM 0.9 21264337 NP_071926.4 centaurin 3 CENTD3 1 NAAIGGAAGGGGTGLQEQQM[147]SRSV 1 21735548 NP_009117.2 centrosomal protein 2 CEP250 1 EQQTEM[147]EAIQAQREEER

VQENM[147]IQEKSV 0.83 20336726 NP_073603.2 ceramide kinase isoform a; lipid kinase LK4 CERK 1 SAGVDQNHPRAVLVPSSLSV 1 29244924 NP_115597.3 chromodomain helicase DNA binding protein 6 CHD6 1 SAEQGVTDGTSDIPER

KTKGDNPNSHPEPAPSCERSKTNTIAMEGEPTAIPSQPFKKMTSHNGM[147]EDSGGGGTGVK

PM 0.65 41149958 XP_370738.1 chromodomain helicase DNA binding protein 8 CHD8 1 SSPASSAPHSGGKTGMEENRSSSAASMAEEEASAVSTAAAQFTK

PM 0.85 40353769 NP_056239.3 chordin-like 2; breast tumor novel factor 1 CHRDL2 1 PDSCCQACKDEASEQSDEEDSVQSLHGVRPM 1 7108336 NP_036257.1 cholinergic receptor, muscarinic 5 CHRM5 1 STSTTGKPSQATGPSANWAKSV 0.81 4757982 NP_004189.1 cholinergic receptor, nicotinic, alpha polypeptide 6 CHRNA6 1 TPTTHTMPRSV 1 4502837 NP_000741.1 cholinergic receptor, nicotinic, beta polypeptide 4 CHRNB4 1 VANAEEKLM[147]DDLLNKTRPM 0.95 16507208 NP_055940.2 capicua homolog CIC 1 GKGYGSAPSSSASSPASSSASAATSFPM 0.96 4758736 NP_004134.1 Cbp\p300-interacting transactivator, with Glu\Asp-rich carboxy-terminal domain, 1 CITED1 1 EDANQEMSSVAYSNLAVKPM 1 19923521 NP_060674.2 cytoskeleton associated protein 2 CKAP2 1 PPNSVVTQHEPAGQNEK

PM+SV 1 19920317 NP_006816.2 cytoskeleton-associated protein 4 CKAP4 4 DFTSLENTVEERVQEQVHTLLSQDQAQAAREAVKEIQTSAKASVSQVEADLKISEVLQKSINDNIAIFTEVQKSINDNIAIFTEVQKRLQHVEDGVLSMQVASAR

PM 0.74 4758010 NP_004889.1 clock CLOCK 1 SSHTAVSDPSSTPTKIPTDTSTPPREM[147]CTVEEPNEEFTSR

PM 0.83 4502901 NP_001825.1 clathrin, light polypeptide isoform a CLTB 1 VAQLCDFNPKPM 1 4758012 NP_004850.1 clathrin heavy chain 1 CLTC 1 ENPYYDSR

DAMQYASESKISGETIFVTAPHEATAGIIGVNR

SV 0.7 21361816 NP_061971.2 cyclic nucleotide gated channel beta 3 CNGB3 1 TTNPDPQNAAEPTGTVPEQKEMDPGKSV 0.84 7662350 NP_054860.1 cell recognition molecule Caspr2 CNTNAP2 1 MSQIDISSGSGLNDGQWHEVRPM 0.84 47519929 NP_387504.2 cell recognition molecule CASPR3 CNTNAP3 1 TNETHTSWGGSLPDAQKPM 0.9 18496979 NP_207837.1 cell recognition protein CASPR4 isoform 1 CNTNAP4 1 SVAVDGQMASAAPLLGPEQIY

VASMEQLQATINRAEHCEQEF

SV 0.7 6678676 NP_031383.1 component of oligomeric golgi complex 2 COG2 1 KTTPANPVGPSGGM[147]SDDDKSV 1 18375520 NP_542196.1 alpha 1 type XI collagen isoform B preproprotein COL11A1 1 GPPGPQGPIGYPGPR

GERGEKGEAGPPGAAGPPGAKGRPGADGGRGM[147]PGEPGAKGVKGADGVR

PM 0.77 18201915 NP_542410.1 alpha 2 type XI collagen isoform 3 preproprotein COL11A2 1 GRTGPTGDPGPPGLMGEKSV 0.97 22027587 NP_542994.2 alpha 1 type XIII collagen isoform 8 COL13A1 1 GMPGMPGKHGAKGAPGIAVAGMK

VGSPGDAGLSIIGPRGDAGNSIGGGRGEPGPPGLPGPPGPK

SV 0.96 4502945 NP_000079.1 alpha 1 type I collagen preproprotein COL1A1 1 GDAGAPGAPGSQGAPGLQGM[147]PGERSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDAGAPGAPGSQGAPGLQGMPGERGARGSAGPPGATGFPGAAGR

PM 0.88 4502947 NP_000080.1 alpha 2 type I collagen; Collagen I, alpha-2 polypeptide COL1A2 1 GAPGPDGNNGAQGPPGPQGVQGGKPM 0.77 40805823 NP_690848.1 collagen, type XXII, alpha 1 COL22A1 1 DGPNGPPGPPGTKGEPGERSV 0.92 15149479 NP_149162.1 alpha 1 type II collagen isoform 2 COL2A1 1 EGSPGADGPPGRDGAAGVK

GDVGEKGPEGAPGKDGGRDIVGPKGPPGPQGPAGEQGPRGDRGEPGDDGPSGAEGPPGPQGLAGQR

PM 0.84 4502951 NP_000081.1 alpha 1 type III collagen COL3A1 1 GAAGPPGPPGAAGTPGLQGMPGERPM 0.82 16554579 NP_000084.2 alpha 1 type V collagen preproprotein COL5A1 1 GIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGL

PM+SV 0.66 7656989 NP_056534.1 collagen, type V, alpha 3 preproprotein COL5A3 2 GDPGPPGPIGSLGHPGPPGVAGPLGDFGHVGQPGPPGEDGERGAEGPPGPTGQAGEPGPR

PM 0.96 17402877 NP_478054.1 alpha 2 type VI collagen isoform 2C2a precursor; collagen VI, alpha-2 polypeptide COL6A2 1 AVVITDGHVTGSPCGGIKLQAERSV 0.88 11386161 NP_001843.1 alpha 2 type IX collagen COL9A2 1 EGEPGPRGEIGPQGIM[147]GQK

GMVGAIGATGPPGEEGPRGPPGRAGEKPM 0.72 18105016 NP_005668.2 acetylcholinesterase collagen-like tail subunit isoform I precursor COLQ 1 TADQHGTCGDGLLQPGEECDDGNSDVGDDCIRPM 0.92 20141387 P43254 COP1 regulatory protein COP1 1 MEEISTDPVVPAVKPDPR

HENDDGGSGGSEIGAPDLDKSV 0.65 7705369 NP_057535.1 coatomer protein complex, subunit beta COPB1 1 RSLGEIPIVESEIK

PM+SV 1 5902134 NP_009005.1 coronin, actin binding protein, 1A CORO1A 3 DVGTGAAMLTLGPEVHPDTIYAAPEASGTPSSDAVSRTLGPEVHPDTIYTLGPEVHPDTIYSVDWDIAWCPHNDNVIASGSEDCTVM[147]VWEIPDGGLAVFVSEGKLEETVQAKDGYVPPKLQATVQELQKIIEPRKGTVVAEKAAPEASGTPSSDAVSRLEEEMR

PM+SV 0.99 17981856 NP_536846.1 cytochrome c oxidase subunit II COX2 3 VVLPIEAPIRSV 0.87 4502981 NP_001852.1 cytochrome c oxidase subunit IV isoform 1 precursor COX4I1 1 VNPIQGLASKPM 1 4758038 NP_004246.1 cytochrome c oxidase subunit Va precursor COX5A 1 GINTLVTYDMVPEPK

PM+SV 1 17017988 NP_001853.2 cytochrome c oxidase subunit Vb precursor COX5B 2 GAGTLAAQALREDPNLVPSISNKEDPNLVPSISNKRGASGTREDPNLVPSISNK

PM 0.97 4502985 NP_001854.1 cytochrome c oxidase subunit VIb COX6B1 1 AEGTFPGKIPM 0.83 5901928 NP_008938.1 cleavage and polyadenylation specific factor 6, 68 kD subunit CPSF6 1 AGPPGGSSRAAFPQGGRSV 0.89 4503023 NP_000089.1 carnitine palmitoyltransferase II CPT2 1 SIVPTMHYQDSLPR

PM+SV 1 10834974 NP_000564.1 complement component (3b\4b) receptor-1; CD35 antigen CR1 3 CTSDPQGNGVWSSPAPRTPPDPVNGMVHVITDIQVGSRCPNPPAILNGRHTGTPSGDIPYHTGTPFGDIPYGKGTSFDLIGESTIR

SV 0.97 42544177 NP_001868.2 complement component receptor 2 CR2 1 AFIGCPPPPKTPNGNHTGGNIAREVNCSSPADM[147]DGIQK

PM 1 19745184 NP_604391.1 cAMP responsive element binding protein 1 isoform B CREB1 1 TAPTSTIAPGVVM[147]ASSPALPTQPAEEAARPM 0.83 4758056 NP_004371.1 CREB binding protein CREBBP 1 PQNQFPSSSGAMSVGMGQPPAQTGVSQGQVPGAALSV 1 5174675 NP_006052.1 cysteine-rich secretory protein 3; specific granule protein (28 kDa) CRISP3 1 MEWNKEAAANAQKPM 1 4758064 NP_004261.1 cofactor required for Sp1 transcriptional activation, subunit 9, 33kDa CRSP9 1 PHSEAGMRVKTEPMDADDSNNCTGQNEHQR

PM+SV 0.71 4758072 NP_004066.1 cryptochrome 1 (photolyase-like) CRY1 2 QGRSSM[147]GTGLSGGKM[147]GVNAVHWFR

PM 1 38327625 NP_004068.2 citrate synthase precursor, isoform a CS 1 TVVGQITVDMMYGGMRPM 0.73 41282242 NP_009089.3 NRAS-related gene CSDE1 1 VSAEKVNKTHSVNGITEEADPTIYSV 0.8 29029559 NP_001307.2 CSE1 chromosome segregation 1-like protein isoform a CSE1L 1 IIIPEIQKPM 0.75 4559408 NP_000386.1 colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) CSF2RB 1 VGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLSV 0.79 27437045 NP_758519.1 granulocyte colony stimulating factor receptor; CD114 antigen CSF3R 1 LSDGTQESIITLPHLPM 0.67 4758078 NP_004374.1 c-src tyrosine kinase CSK 1 EGIIPANYVQKPM 1 4503095 NP_001886.1 casein kinase II alpha 1 subunit CSNK2A1 1 GGPNIITLADIVKDPVSRPM 0.73 4503117 NP_000091.1 cystatin B CSTB 1 SQVVAGTNYFIKPM 0.92 14149675 NP_056050.1 cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant CSTF2T 1 SLGPAAPIIDSPYGDPIDPEDAPESITRPM 1 51473039 XP_496169.1 Chymotrypsinogen B2 CTRB2 1 QVSLQDKTGF

PM+SV 1 4503149 NP_001902.1 cathepsin G preproprotein CTSG 4 LQIQSPAGQSRSSGVPPEVFTRNRNVNPVALPRNVNPVALPRIFGSYDPRSSGVPPEVFTRMAYLQIQSPAGQSRM[147]AYLQIQSPAGQSRAQEGLRPGTLGKSSGVPPEVFTRRENTQQHITARENTQQHITARRGTDTLRHPQYNQR

SV 0.86 23110962 NP_004070.3 cathepsin S preproprotein CTSS 1 GPVSVGVDAREAVANKGPVSVGVDAR

PM 0.81 16975496 NP_219499.1 cortactin binding protein 2 CTTNBP2 1 GSVCTSATMARPGIDRQASYPM 0.83 4557503 NP_001072.1 cubilin CUBN 1 NTAVVR

YSSM[147]STAM[147]VIFKIYDGPSIHAR

PM 0.9 4503173 NP_001329.1 coxsackie virus and adenovirus receptor precursor CXADR 1 M[147]PTSWLAEM[147]TSSVISVKPM+SV 1 4557505 NP_000092.1 cytochrome b-558, alpha polypeptide; p22-phox CYBA 4 GEQWTPIEPK

QPPSNPPPRPPAEARGEQWTPIEPKPRERPQIGGTIKKKPSEEEAAAAAGGPPGGPQVNPIPVTDEVVM[147]GQIEWAM[147]WANEQAL

PM 0.72 6685252 Q61093 Cytochrome B(558) beta chain (GP91-PHOX) CYBB 1 TLYGRPNWDNEFKKLLGSALALAR

SV 0.9 24307955 NP_055191.1 p53 inducible protein CYFIP2 1 GGFDIKVPRPM 1 13435391 NP_001073.3 cytochrome P450, family 4, subfamily F, polypeptide 2 CYP4F2 1 LSDEDIR

LVHDFTDAVIQERVLPDHTEPR

PM 0.83 1706093 P51869 Cytochrome P450 4F4 (CYPIVF4) CYP4F8 1 SPLAFIPFSAGPRSV 0.99 41281683 NP_619723.1 DAB2 interacting protein DAB2IP 1 RIDQPPPPPPPPPPAPRGR

PM+SV 0.86 24158478 NP_057735.2 DAPPER1 DACT1 2 TNKPRTSVNADPTKGAGGAGAAAPR

SV 0.86 20149621 NP_056348.2 dihydroxyacetone kinase 2 DAK 1 IDAETTAAAWPNVAAVSITGRSADEVELGLGIHGEAGVR

PM 0.68 4503265 NP_001909.1 dihydrolipoamide branched chain transacylase DBT 1 ASHNIGIAM[147]DTEQGLIVPNVKSV 0.99 51463946 XP_047355.4 doublecortin and CaM kinase-like 3 DCAMKL3 1 VTDALNATR

TVIIEQSWGSPKWEPEPSSKPPRGVMLAVDAVIAEPKK

PM 0.99 4503267 NP_001910.1 dodecenoyl-Coenzyme A delta isomerase DCI 1 DADVQNFVSFISKSV 0.74 46094081 NP_060952.2 development and differentiation enhancing factor 1 DDEF1 1 GPTGPPSTLPLSTQTSSGSSTL

SKPTVDIVNQAGETALDIAKSQTGDVSPKAQQPSEVTLK

PM 0.67 4502249 NP_003878.1 PYK2 C terminus-associated protein DDEF2 1 M[147]PDQISVSEFVAETHEDYKSV 0.65 38327632 NP_001945.3 discoidin receptor tyrosine kinase isoform b DDR1 1 AFQAMQVHCNNM[147]HTLGARPM 0.94 4758140 NP_004388.1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 DDX6 1 DDIMRLDDTVHVVIATPGR

HMGGAKVM[147]ATTGGTNLRPM 1 4758156 NP_004708.1 diacylglycerol kinase, iota DGKI 1 SLPVANGPAKPM 0.99 20149619 NP_056325.2 dehydrogenase/reductase (SDR family) member 7B DHRS7B 1 SPVEVAQDVLAAVGKKPM 0.84 4503297 NP_001348.1 DEAH (Asp-Glu-Ala-His) box polypeptide 9 isoform 1 (leukophysin) DHX9 1 GSGGYGGSATPSGRICAGVGGGYPM 0.8 17485400 XP_027105.2 death-inducing-protein DIP 1 IQWSIVPEVSEPVEPPKPM 0.83 51475876 XP_498167.1 similar to zinc finger protein 316 DKFZp434J1015 1 THTGERPFPCPECGARSV 0.79 33188437 NP_006085.2 Rho-GTPase-activating protein 7 DLC1 1 QEVSSVR

PM+SV 1 4557525 NP_000099.1 dihydrolipoamide dehydrogenase precursor DLD 2 FPFAANSRADGGTQVIDTKTNADTDGMVKIPNIYAIGDVVAGPM[147]LAHK

SV 0.99 6715595 NP_031363.1 deleted in lung and esophageal cancer 1 isoform DLEC1-S3 DLEC1 1 VMSQAGVQDLESLVRSV 0.94 4758162 NP_004078.1 synapse-associated protein 97 DLG1 1 IITGGAAAQDGRPM 1 19923748 NP_001924.2 dihydrolipoamide S-succinyltransferase DLST 1 AKPAEAPAAAAPK

DDLVTVKPM 1 21536474 NP_005500.3 Dmx-like 1 DMXL1 1 PSGLTRSTSM[147]LISSGHNKPM 1 118707 P24116 Chromosomal replication initiator protein dnaA DNAA 1 EVVSEKYGISVNAIDGKSV 0.95 17864092 NP_061720.1 axonemal dynein heavy chain 7 DNAH7 1 WPLMIDPQSQANK

VASKEVDEM[147]M[147]IMIEKRDIM[147]RSVMQDKFLEEIEM[147]SEEIR

PM+SV 0.73 15029526 NP_001362.1 dynein, axonemal, heavy polypeptide 8 DNAH8 3 LSEDMLSKLPQFAEIM[147]NQISRQELPENLKDDIEDICISAIKEKDIEAKLPQFAEIMNQISRISDLCEM[147]HIDTVLK

PM 0.68 7706495 NP_057390.1 DnaJ (Hsp40) homolog, subfamily B, member 11 precursor DNAJB11 1 VYNGLQGYPM 1 12643505 Q29455 DnaJ homolog subfamily C member 5 (Cysteine string protein) DNAJC5 1 SLSTSGESLYHVLGLDKPM 0.76 4758182 NP_004399.1 dynamin 1 DNM1 1 PGMTKVPVGDQPPDIEFQIRPM 0.72 47078261 NP_003577.2 double C2-like domains, alpha DOC2A 1 NEDLTYSGITDDDITHKSV 1 40068509 NP_653259.2 DOC11, dedicator of cytokinesis 11 DOCK11 1 GSSPESYIHGIAESQLRSV 0.75 44889960 NP_982272.1 DOC8, dedicator of cytokinesis 8 DOCK8 1 EVTDVDSVVGRPM 0.7 4503357 NP_001372.1 Downstream of tyrosine kinase 1 DOK1 1 AQGKAGQGHDVLR

PM+SV 0.74 31542770 NP_775931.2 downstream of tyrosine kinase 7 DOK7 3 DSGGQTSAGCPSGWLGTRM[147]M[147]SSSWPGTSPR

SV 0.83 4503379 NP_001378.1 dihydropyrimidinase-like 3 DPYSL3 1 M[147]VIPGGIDVHTHFQM[147]PYKSV 0.98 19923821 NP_064519.2 dihydropyrimidinase-like 5 DPYSL5 1 DIGAIARPM 0.75 2501668 Q13474 Dystrophin-related protein 2 DRP2 1 QLQASVDERLKPM 0.97 4503401 NP_001933.1 desmosomal glycoprotein 1 DSG1 1 GGTASIGHMRSSSDHHFNQTIGSASPSTARSV 1 20357504 NP_065121.2 dystonin isoform 1eB precursor DST 2 DVLPPIIK

ILIQNLIKSV 0.69 38348290 NP_940890.1 hypothetical protein LOC286077 DUF1669 1 KEEASSPGAGEGPAEEGTR

EQTVSETLGPGGEAVRSV 0.95 33350932 NP_001367.2 dynein, cytoplasmic, heavy polypeptide 1 DYNC1H1 1 TPVIDADKPVSSQLR

PM+SV 1 4503431 NP_003485.1 dysferlin; dystrophy-associated fer-1-like 1 DYSF 2 LDQSGGPGAPTTPRGKTQEETEDPSVIGEFK

PM 0.67 4503439 NP_001943.1 E2F transcription factor 6 isoform 1 E2F6 1 EDSITVHIRSTNGPIDVYLSV 0.88 51468592 XP_171410.3 early B-cell factor 3; Ebf3 protein EBF3 1 EGGRPGQSFGADGGPR

ALCGGCPTLPRTGRTPAISCPRANAPSDMARQLGPVAMGPPMVRVQGVTGSGGIPAPPTKGCSSAR

PM 0.83 24041023 NP_694536.1 embryonic ectoderm development isoform b EED 1 GIIRIINPITMQCIKSV 1 4503475 NP_001949.1 eukaryotic translation elongation factor 1 alpha 2 EEF1A2 1 IGGIGTVPVGR

KIGGIGTVPVGRSV 1 4503483 NP_001952.1 eukaryotic translation elongation factor 2 EEF2 1 GHVFEESQVAGTPMFVVKSV 0.99 24308275 NP_068756.1 elongation factor for selenoprotein translation EEFSEC 1 FHITVGHETVM[147]GRSV 1 41152056 NP_004238.2 elongation factor Tu GTP binding domain containing 2 EFTUD2 1 ILDAVVAQEPLHRSV 0.73 22062496 XP_170658.1 EH domain binding protein 1-like 1 EHBP1L1 1 AGAGAPR

EEAQTSGVQEAETRHVDTKGPEATGVM[147]PEARCRANEAGGQVGPEAPRPPETSPEM[147]R

PM+SV 0.99 30240932 NP_006786.2 EH-domain containing 1; testilin EHD1 2 QEESLMPSQVVKHLIEQDFPGMR

SV 0.98 33667023 NP_003898.1 eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa EIF2B5 1 VSNLHM[147]YSAVCADVIRM[147]AAPVVAPPGVVVSRANK

PM 0.83 6686292 P23116 Eukaryotic translation initiation factor 3 subunit 10 (eIF-3 theta) EIF3S10 1 RGLDDDRGPRSV 0.8 7705433 NP_057175.1 eukaryotic translation initiation factor 3 subunit 6 interacting protein EIF3S6IP 1 VSGGPSLEQRSV 1 4503525 NP_003743.1 eukaryotic translation initiation factor 3, subunit 8, 110kDa EIF3S8 1 DAHNALLDIQSSGRSV 1 4503549 NP_001963.1 elastase 2, neutrophil; medullasin ELA2 3 VSLQLR

QVFAVQRVVLGAHNLSRVNWIDSIIQRM[147]VSLQLRMVSLQLRARPHAWPF

PM 0.89 51458584 XP_371262.2 EGF, latrophilin and seven transmembrane domain containing 1 ELTD1 1 ARPAAPGPGSTAALTPPRSV 0.96 19263347 NP_597714.1 EMI domain containing 2 EMID2 1 GTVGPSGEPGVKPM 0.99 23397683 NP_690880.1 egf-like module containing, mucin-like, hormone receptor-like sequence 2 isoform b EMR2 1 TESEMHTLSSSAK

SGDPGPSVVGLVSIPGMGKPM+SV 1 14211883 NP_115960.1 egf-like module-containing mucin-like receptor 3 isoform a EMR3 2 SESETYTLSSK

MGPDSKPSEGDVFPGQVKSV 0.92 7710121 NP_001418.2 engrailed homolog 2; Engrailed-2 EN2 1 GGGAGGEGGASGAEGGGGAGGSEQLLGSGSR

DAGTCCAGAGGGRPM+SV 1 4503571 NP_001419.1 enolase 1 ENO1 2 AVEHINKTIAPALVSK

IGAEVYHNLKSV 0.94 21264610 NP_631943.1 epidermal growth factor receptor pathway substrate 8-like protein 1 isoform c EPS8L1 1 KKVEGEVEM[147]EVI

EKVSELEAVM[147]EKEKVSELEAVMEK

PM+SV 1 4503595 NP_000493.1 eosinophil peroxidase EPX 4 IGAIAEPLLPGARAVSNQIVRFPNERIVYEGGIDPILRLGASNQALARAVSNQIVRANIYPRIPPNDPRFPNERNLAQLSRDHGLPGYNAWASAPNSHVPLSSAFRLNPR

IICDNTGITTVSRTLGHYR

PM 1 5453706 NP_006450.1 SPFH domain family, member 1 ERLIN1 1 ISEIEDAAFLARPM 1 5803013 NP_006808.1 endoplasmic reticulum protein 29 precursor ERP29 2 ILDQGEDFPASEMTR

DGDFENPVPYTGAVKVGAIQRILDQGEDFPASEM[147]TR

PM+SV 0.95 4759034 NP_004721.1 eukaryotic translation termination factor 1 ETF1 2 M[147]LADEFGTASNIKM[147]LADEFGTASNIK

PM 1 4503607 NP_000117.1 electron transfer flavoprotein, alpha polypeptide ETFA 1 SDRPELTGAKGTSFDAAATSGGSASSEKVAAKLEVAPISDIIAIK

PM 0.99 4503609 NP_001976.1 electron-transfer-flavoprotein, beta polypeptide ETFB 1 LGPLQVARGIHVEVPPAEAERVETTEDLVAK

PM 1 41327741 NP_055112.2 ETHE1 protein ETHE1 1 LSGAQADLHIEDGDSIREAVLIDPVLETAPRGGSGAPILLR

PM 1 21361625 NP_060773.3 exocyst complex component 2 EXOC2 1 NGALQARVIEAVSEELSR

SV 0.96 5730037 NP_006535.1 exocyst complex component 5 EXOC5 1 NVDTVLMELGVRPM 0.77 31415882 NP_852480.1 exosome component 8 EXOSC8 1 AEFAAPSTDAPDKSV 0.97 21359818 NP_055880.1 exophilin 5 EXPH5 1 DHTSTAVGDGSSGSQPR

FCNETDVSQMLKFCNETDVSQM[147]LK

SV 0.85 26667257 NP_742103.1 eyes absent 4 isoform d; deafness, autosomal dominant 10 EYA4 1 SMEMQDLASPHTLVGGGDTPGSSKSV 0.87 4503631 NP_000120.1 Coagulation factor XIII, A polypeptide F13A1 1 GTQVVGSDMTVTVQFTNPLKPM 1 4503647 NP_000123.1 coagulation factor VIIIc F8 1 VDLLAPMIIHGIKPM 0.81 21362096 NP_073597.2 chromosome 20 open reading frame 81 FAM113A 1 DGVHWDQHAHRSV 0.72 40288203 NP_689917.2 hypothetical protein FLJ25477 isoform 1 FAM123A 1 SFDSLTGCGDIIADQEEEAGPSCDKSV 0.84 41147327 XP_371832.1 hypothetical protein LOC57579 FAM135A 1 LICLGTPCVISGSISSNTDVSEDRSV 0.91 51468049 XP_495809.1 hypothetical protein LOC253725 FAM21C 1 EVDLIPKSV 1 13384602 NP_071351.1 family with sequence similarity 38, member B FAM38B 1 MIAGNSTESSKTPVTIEKPM 0.77 46255017 NP_996889.1 hypothetical protein MGC14128 isoform b FAM83A 1 VQISDSHLKPM 0.92 21361861 NP_149075.2 Fanconi anemia, complementation group D2 FANCD2 1 SQNSQESTADESEDDMSSQASKSKATEVSLPM 0.9 8922360 NP_060532.1 Fanconi anemia, complementation group L FANCL 1 DVLEIDFPARPM 0.92 4885229 NP_005236.1 FAT gene product FAT 2 IEVEDVNDNAPQTSEPVYYPEIM[147]ENSPK

GTVKEDAPVGSLVMTVSAHDEDAGRPM 0.91 13787217 NP_001438.1 protocadherin FAT2 FAT2 1 TQLHYEASVPDTIAPGTELSV 0.76 31542628 NP_115823.2 fibrillin 3 FBN3 1 EDGAMCRDVDECADGQQDCHARPM 0.84 24432072 NP_659469.2 F-box and leucine-rich repeat protein 13 FBXL13 1 YIANSCTGIMHLTINDMPTLSV 0.65 20149533 NP_001993.2 Fc fragment of IgE, low affinity II, receptor for (CD23A) FCER2 1 LATCTPPASEGSAESM[147]GPDSRPDPDGRPM 0.97 11056052 NP_067674.1 Fc fragment of IgG, low affinity IIa, receptor for (CD32) FCGR2A 1 ISANSTDPVKPM 1 24429586 NP_000560.4 Fc fragment of IgG, low affinity IIIa, receptor for (CD16) FCGR3A 1 TEDLPK

VTYLQNGKDSVTLK

PM 1 7994572 O75015 Low affinity immunoglobulin gamma Fc region receptor III-B precursor (CD16-B) FCGR3B 1 AVVFLEPQWYSVLEKPM 1 8051584 NP_001994.2 ficolin 1 precursor FCN1 2 AGPVGPK

VADEAEKVADEAEKYKGEAGVIGER

SV 0.93 4758356 NP_004102.1 flap structure-specific endonuclease 1 FEN1 1 LIADVAPSAIRENDIKPM 1 4503689 NP_000499.1 fibrinogen, alpha chain isoform alpha-E preproprotein FGA 1 DSHSLTTNIM[147]EILRPM 0.8 11761631 NP_005132.1 fibrinogen, beta chain preproprotein FGB 1 AHYGGFTVQNEANKSV 1 32698765 NP_149077.1 FYVE, RhoGEF, and PH domain containing 3 FGD3 1 SLELISTAANHSNAAIRPM 0.82 47524173 NP_002002.3 fibroblast growth factor receptor 4 isoform 1 precursor FGFR4 1 IADFGLARSV 1 4885235 NP_005239.1 proto-oncogene tyrosine-protein kinase FGR FGR 1 IADFGLAR

SYGAADHYGPDPTKPM 0.65 19743875 NP_000134.2 fumarate hydratase precursor FH 1 AADEVAEGKSV 1 51471742 XP_370737.3 hypothetical protein LOC55701 FLJ10357 1 PGELRGGGGGGQGAEGPPGTPRPM 0.8 13375809 NP_078880.1 hypothetical protein FLJ21908 FLJ21908 1 GIAADGANALLPANR

NLDPDVFNQIVKAIECYTR

SV 1 42476015 NP_079105.2 hypothetical protein FLJ22662 FLJ22662 1 WADIFSKSV 0.78 46411154 NP_079143.2 KPL2 protein isoform 1 FLJ23577 1 YLNEMASTEKSV 0.9 46409452 NP_997297.1 hypothetical protein LOC389690 FLJ43860 1 SQSSQATLMPQEHRPM 1 41148782 XP_372120.1 hypothetical protein LOC389763 FLJ46321 1 QTVLASR

PEM[147]LSLGGSGGSSTSAPTIKPM+SV 1 4503745 NP_001447.1 filamin A, alpha (actin-binding protein-280) FLNA 4 FIIDTR FADQHVPSAGQGEVLVYVEDPAGHQEEAK

VAQPTITDNKDGTVTVRAFGPGLQGGSAGSPARTGVAVNKPAEFTVDAKAGGPGLERATCAPQHGAPGPGPADASKVVAKGLTAGAGTGEVEVVIQDPMGQKGTVEPQLEARAWGPGLEGGVVGKQGGSAGSPARLSPFM[147]ADIRDLSDGLRADTHIPGSPFKVTVLFAGQHIAKVDVGKDQEFTVKYNEQHVPGSPFTARDVDIIDHHDNTYTVKFADQHVPGSPFSVKSAGQGEVLVYVEDPAGHQEEAK

SV 0.93 4503747 NP_001448.1 filamin B, beta (actin binding protein 278) FLNB 1 NGNHVANSPVSIM[147]VVQSEIGDARVEVGKDQEFTVDTRTATPEIVDNKDGTVTVR

PM 1 4557597 NP_001449.1 filamin C, gamma (actin-binding protein-280) FLNC 1 TPCEEVYVKHMGNRSVNTRGAGGQGQLDVRDLSDGLR

PM 0.99 5031699 NP_005794.1 flotillin 1 FLOT1 2 LPQVAEEISGPLTSANKVQVQVVERAQQVAVQEQEIARGEAEAFAIGARDYELKSQLIM[147]QAEAEAASVRM[147]R

PM 0.87 4758394 NP_004466.1 flotillin 2 FLOT2 2 VDEIVVLSGDNSKEVAAPDVGRDADIGVAEAERIQQIAEGEKVKDADIGVAEAERDAGIR

PM 0.73 20138400 Q9NZU0 Leucine-rich repeat transmembrane protein FLRT3 precursor FLRT3 1 NSLTAAPVNLPGTNLRPM 1 4503753 NP_002011.1 fms-related tyrosine kinase 4 isoform 2 FLT4 1 M[147]RAPELATPAIR

SQVSTM[147]ALHIAQADAEDSPPSLQRPM 0.88 51459134 XP_371352.2 formin 2 FMN2 1 ETEDGGGGKPM 0.84 33356148 NP_005883.2 formin-like 1 FMNL1 1 AGSVSLDSVLADVRPM 0.65 4503761 NP_001452.1 flavin containing monooxygenase 5 FMO5 1 VIIIGIGNSGGDLAVEISQTAKSV 0.99 38524622 NP_055848.1 formin-binding protein 1 FNBP1 1 TYAEVDRQVIPIIGKPM 0.77 4758388 NP_004465.1 forkhead box D2 FOXD2 1 GAAAAAGSPGPGAAAARGAAGPGPGPPSGGAATR

PSFSIDHIM[147]GHGGGGAAPPGAGEGSPGPPFPM 0.76 31982943 NP_054728.2 forkhead box P3 FOXP3 1 LSAMQAHLAGKPM 0.92 3023794 P79241 fMet-Leu-Phe receptor (fMLP receptor) FPR1 1 LIHALPASLER

PM 0.8 51471440 XP_292193.3 FRAS1 related extracellular matrix protein 2 FREM2 1 GSSSSEPMVPPQSHHNDSSEVSV 0.83 5730059 NP_006644.1 fibroblast growth factor receptor substrate 3 FRS3 1 SHGSFPVPLTRPM 1 37078499 Q96I24 Far upstream element binding protein 3 FUBP3 1 PLDDGVGNQLGALVHQRPM 1 4826734 NP_004951.1 fusion (involved in t(12;16) in malignant liposarcoma) FUS 1 GGGGSGGGGRGGFPSGGGGGGGQQRPM 0.68 4503833 NP_003498.1 frizzled 7 FZD7 1 PVHGAGEICVGQNTSDGSGGPGGGPTAYPM 0.95 38195091 NP_938080.1 GalNAc transferase 10 isoform a GALNT10 1 ERQPDGTPGGSGAAVAPAAGQGSHSRQKSV 0.95 38202257 NP_938148.1 alpha glucosidase II alpha subunit GANAB 1 VSQGSKDPAEGDGAQPEETPR

PM+SV 1 7669492 NP_002037.2 glyceraldehyde-3-phosphate dehydrogenase GAPDH 2 GALQNIIPASTGAAKVIHDNFGIVEGLMTTVHAITATQKDGRGALQNIIPASTGAAKDAGAGIALNDHFVKVVDLMAHMASKEVGVNGFGRVVDLM[147]AHM[147]ASKEMTTVHAITATQKVVDLM[147]AHMASKETVDGPSGKLW

SV 0.67 42659261 XP_044196.6 GTPase activating protein and VPS9 domains 1 GAPVD1 1 ELPPAAAIGATSLVAAPHSSSSSPSKPM 1 31542535 NP_115669.2 GTPase activating Rap\RanGAP domain-like 3 GARNL3 1 GDAPSSLAASGICKSV 0.68 4503919 NP_002039.1 growth arrest-specific 1 GAS1 1 TSGGGAGGPGAGGVM[147]GCTEARPM 0.81 3913719 O43903 Growth-arrest-specific protein 2 (GAS-2) GAS2 1 LDNGALLCQLAETM[147]QEKPM 0.8 28372563 NP_777602.1 growth arrest-specific 2 like 3 GAS2L3 1 TPQPPEM[147]NPLSAVNMFPM 0.8 51471344 XP_045792.8 GCN1 general control of amino-acid synthesis 1-like 1 GCN1L1 1 QAAEVM[147]GR

CVAGKDLPEGAVKQVFTSEKQGEEVFQSLSK

SV 0.96 22748955 NP_689664.1 GRINL1A complex upstream protein GCOM1 1 TPGAPSRPM 0.7 4503977 NP_003934.1 genethonin 1 GENX-3414 1 FVLVENGGVTRPM 0.71 30061500 NP_821158.1 gamma-glutamyltransferase-like 3 isoform c GGTL3 1 GLLFSRTPQNGSMNVLRTSV 0.97 4885281 NP_005262.1 glutamate dehydrogenase 1 GLUD1 1 DIVHSGLAYTMER

HGGTIPIVPTAEFQDRPM 0.8 7706107 NP_057657.1 GEM interacting protein GMIP 1 LCEETPITSVPRGSLR

SQGSPEDSAPQASPGPSKPM+SV 0.99 4504041 NP_002061.1 guanine nucleotide binding protein, alpha inhibiting activity polypeptide 2 GNAI2 4 AMGNLQIDFADPSR

DEAASYIQSKAVVYSNTIQSIM[147]AIVKTTGIVETHFTFKAVVYSNTIQSIMAIVKIAQSDYIPTQQDVLRYDEAASYIQSK

PM 0.99 20357529 NP_005264.2 guanine nucleotide-binding protein, beta-2 subunit GNB2 1 LLVSASQDGKSV 1 6715600 NP_002069.2 golgi autoantigen, golgin subfamily a, 4 GOLGA4 1 QMTTQGEELREQK

EENPESDGEPVVEDGTSVKPM 0.74 29550850 NP_808800.1 golgi phosphoprotein 2 GOLPH2 1 DQLVIPDGQEEEQEAAGEGRPM 0.98 4504069 NP_002071.1 glutamic-oxaloacetic transaminase 2 GOT2 1 DAGMQLQGYR

IGASFLQRSV 0.93 47419932 NP_000164.3 platelet glycoprotein Ib alpha polypeptide precursor GP1BA 1 GQDLLSTVSIRPM 0.79 5031561 NP_005805.1 transmembrane glycoprotein A33 GPA33 1 VTVDAISVETPQDVLRPM 0.85 8922313 NP_060510.1 G patch domain containing 2 GPATCH2 1 SGGTPTSMVPIPGPVGNK

PM+SV 1 4504085 NP_000399.1 glycerol-3-phosphate dehydrogenase 2 GPD2 2 NHVVDISESGLITIAGGKNHVVDISESGLITIAGGKDDFSSGTSSRCVINATGPFTDSVRK

SV 1 18201905 NP_000166.2 glucose phosphate isomerase; neuroleukin GPI 1 VWYVSNIDGTHIAKSNTPILVDGKDVMPEVNK

PM 0.92 24307895 NP_005269.1 glycoprotein M6B isoform 3; protolipid M6B GPM6B 1 MKPAM[147]ETAAEENTEQSQERSV 0.66 23308585 NP_694547.1 GABAB-related G-protein coupled receptor GPR156 1 DSQCTSGPSSYAQSLEGPGK

SV 0.91 51474233 XP_496215.1 GPR158-like 1 GPR179 1 QDGKGDSQEEKPM+SV 0.97 19882213 NP_115495.1 very large G-protein coupled receptor 1 GPR98 2 IIIMKNDNAEGIIEFDPK

ATSIDIEEANRVIEETADYVECACSHM[147]SVYAVYETVSETAFGM[147]RGM[147]DVVFEVEEDVGLIMIPVVRVATENTDEQLSAMMHLIEKNSIEIIIEKNDSPVRGYIVLEEGVRQQSISIFVNEDGIPETDEPFLDSEGLTAQVIIDANDGAR

PM 0.82 4504117 NP_000821.1 Glutamate receptor, ionotropic, kainate 1 isoform 1 precursor GRIK1 1 DAVYMVAIASHRPM 0.9 29029595 NP_055434.2 glutamate receptor KA1 precursor GRIK4 2 DSEYETAETM[147]CQILPKSV 0.94 33695161 NP_892027.1 G protein-coupled receptor kinase 2-like isoform 1 GRK4 1 VGTVGYM[147]APEVVNNEKSV 0.99 4504101 NP_002073.1 G protein-coupled receptor kinase 6 GRK6 1 ISDLGLAVHVPEGQTIKSV 0.75 4504149 NP_000836.1 glutamate receptor, metabotropic 8 precursor GRM8 1 EHTHPASVCSLPCKPGERPM 1 4033392 Q90593 78 kDa glucose-regulated protein precursor (GRP 78) GRP78 1 DNHLLGTFDLTGIPPAPR

NQLTSNPENTVFDAKRSV 1 40255031 NP_079012.2 gasdermin domain containing 1; 1810036L03Rik GSDMDC1 1 SHLAAGLPPAPGPHPHPTARSV 0.92 38044288 NP_937895.1 gelsolin GSN 1 AGKEPGLQIWSV 0.72 4504167 NP_002085.1 G1 to S phase transition 1 GSPT1 1 QDQVCIAR

SVVAPPGAPKPM 0.98 4504205 NP_001512.1 general transcription factor IIIC, polypeptide 2, beta 110kDa GTF3C2 1 VSSPTKPK

VALGEAGPVGNMTVVDSPGQEVLNQLSV 1 20127457 NP_004121.2 glycogenin GYG1 2 VVLATPQVSDSMR

LVVLATPQVSDSM[147]RLVVLATPQVSDSMR

PM 1 4504225 NP_002090.1 glycophorin A precursor GYPA 2 SPSDVKPLPSPDTDVPLSPSDVKPLPSPDTDVPL

SV 1 31542868 NP_002094.2 glycogen synthase 1 (muscle) GYS1 2 KPDIVTPNGLNVKIGLFNSSADRKPDIVTPNGLNVKIGLFNSSADRTTVSQITAIEAQHLLK

SV 0.95 4758494 NP_004122.1 granzyme B precursor GZMB 1 VAQGIVSYGRNNGMPPRPM 1 122000 P02263 Histone H2A-IV H2A4 1 NDEELNKLLGK

VTIAQGGVLPNIQAVLLPKHLQLAIRNDEELNKAGLQFPVGR

PM+SV 1 8922758 NP_060737.1 H2A histone family, member J isoform 1 H2AFJ 4 AGLQFPVGRNDEELNKAGLQFPVGR

SV 1 4758496 NP_004884.1 H2A histone family, member Y isoform 2 H2AFY 1 LEAIITPPPAKKGKLEAIITPPPAKNGPLEVAGAAVSAGHGLPAKSIAFPSIGSGRAGVIFPVGR

PM 0.73 2851391 P16391 RT1 class I histocompatibility antigen, AA alpha chain precursor HA12 1 FIAVGYVDDTEFVRPM 0.99 4885387 NP_005318.1 L-3-hydroxyacyl-Coenzyme A dehydrogenase, short chain HADH 1 TGEGFYK

AGDEFVEKPM+SV 1 20127408 NP_000173.2 hydroxyacyl dehydrogenase, subunit A HADHA 4 DTSASAVAVGLK

GQQQVFKGLNDKMVGVPAALDMMLTGRILQEGVDPK

PM 1 4504327 NP_000174.1 hydroxyacyl dehydrogenase, subunit B HADHB 1 DNGIRPSSLEQM[147]AKNVVVVDGVRLAAAFAVSR

PM+SV 1 4504347 NP_000549.1 alpha 1 globin HBA1 3 VGAHAGEYGAEALERPM 0.91 122698 P02051 Hemoglobin beta chain HBB 1 FFDSFGDLSTPAAVMGNAKSV 1 38788353 NP_006393.2 hepatitis B virus x-interacting protein HBXIP 1 GTLSDEHAGVISVLAQQAAKPM 1 4885403 NP_005325.1 host cell factor C1 (VP16-accessory protein) HCFC1 1 VASSPVM[147]VSVSNPATR

TM[147]AVTPGTTTLPATVKTMAVTPGTTTLPATVK

SV 1 4885405 NP_005326.1 hematopoietic cell-specific Lyn substrate 1 HCLS1 1 SPEAPQPVIAMEEPAVPAPLPKKISSEAWPPVGTPPSSESEPVRRSPEAPQPVIAMEEPAVPAPLPKEHPVPLLPIR

SV 0.96 5174481 NP_006028.1 histone deacetylase 4; histone deacetylase A HDAC4 1 EAHAQAGVQVKSV 0.98 51460558 XP_042685.3 HEAT repeat containing 5B HEATR5B 1 M[147]VVSIAEDLLRPM 0.66 41107420 XP_371246.1 HECT domain containing 3 HECTD3 1 TVDTTDDNFMPK

ACPSRDPACKFEDFEPSDSR

SV 0.92 7705931 NP_057407.1 HECT E3 ubiquitin ligase HERC5 1 YSTM[147]ETVEEALQEAINNNRPM 1 14211923 NP_115982.1 PKCI-1-related HIT protein HINT2 1 DVAPQAPVHFLVIPK

PM+SV 1 4885381 NP_005313.1 histone cluster 1, H1b HIST1H1B 2 KATGPPVSELITKPM+SV 1 4885379 NP_005312.1 H1 histone family, member 4 HIST1H1E 1 KASGPPVSELITK

ALAAAGYDVEKSV 0.88 4504243 NP_003502.1 H2A histone family, member I HIST1H2AL 1 VTIAQGGVLPNIQAVLLPK

PM+SV 0.97 24586679 NP_733759.1 histone cluster 1, H2B HIST1H2BA 3 AM[147]SIMNSFVTDIFERAMSIM[147]NSFVTDIFERVLKQVHPDTGISSKAM[147]SIM[147]NSFVTDIFERAMSIMNSFVTDIFERM[147]PEVSSKGATISKK

PM+SV 1 4504271 NP_003516.1 H2B histone family, member K , HIST1H2BI 2 QVHPDTGISSKAMGIM[147]NSFVNDIFERVLKQVHPDTGISSKAM[147]GIM[147]NSFVNDIFERAMGIMNSFVNDIFERSTITSREIQTAVR

PM+SV 1 18105048 NP_542160.1 H2B histone family, member T HIST1H2BK 2 AM[147]GIMNSFVNDIFERAMGIMNSFVNDIFERAM[147]GIM[147]NSFVNDIFERSTITSREIQTAVR

PM 1 7387742 Q99879 Histone H2B.e HIST1H2BM 1 AMGIM[147]NSFVNDIFERAM[147]GIMNSFVNDIFERAM[147]GIM[147]NSFVNDIFERAMGIMNSFVNDIFER

PM+SV 1 4504297 NP_003528.1 Histone cluster 1, H3b HIST1H3B 2 DIQLARSTELLIRYRPGTVALVTIMPKDIQLAR

PM+SV 1 21071021 NP_003521.2 Histone cluster 1, H3d HIST1H3D 3 STELLIRDIQLAR

PM+SV 1 4504301 NP_003529.1 H4 histone family, member A HIST1H4A 4 DNIQGITKPAIRRRDNIQGITKPAIRDNIQGITKPAIRISGLIYEETRVFLENVIRTVTAM[147]DVVYALKDAVTYTEHAK

PM+SV 1 4504321 NP_003486.1 H4 histone family, member M HIST1H4I 2 MDVVYDAVTYTEHAKISGLIYEETR

DNIQGITKPAIRVFLENVIRDNIQGITKDNIQGITKPAIRRRDNIQGITKPAIRKTVTAMDVVY

PM 0.86 13375634 NP_078779.1 human immunodeficiency virus type I enhancer binding protein 3 HIVEP3 1 QDSPKPSGSGEPRDTASKPSDEVEPKETYTMATAPHPEAGR

PM+SV 1 24797067 NP_002107.3 major histocompatibility complex, class I, A precursor HLA-A 2 VETRPAGDGTFQKFDSDAASQRSWTAADMAAQITK

PM+SV 0.99 19557677 NP_002108.3 major histocompatibility complex, class I, C precursor HLA-C 3 VDDTQFVRSWTAADTAAQITQRTAADTAAQITQRWAAVVVPSGEEQR

PM 0.97 4504401 NP_002110.1 major histocompatibility complex, class II, DO alpha HLA-DOA 1 FDPQGGLAGIAAIKPM 0.79 11386181 NP_068777.1 H2.0-like homeo box 1 HLX1 1 HQTTVIKAPVTGALITASSAGSGGSSGGGGNSFPM 0.99 30581111 NP_848696.1 minor histocompatibility antigen 13 isoform 3 HM13 1 DPAAVTESKSV 1 4504425 NP_002119.1 high-mobility group box 1 HMGB1 1 YEKDIAAY

GEHPGLSIGDVAKIKGEHPGLSIGDVAKHPDASVNFSEFSK

SV 1 11321591 NP_002120.1 high-mobility group box 2 HMGB2 1 YEKDIAAYSEHPGLSIGDTAKIKSEHPGLSIGDTAKLGEMWSEQSAKSEHPGLSIGDTAKKHPDSSVNFAEFSKLGEM[147]WSEQSAK

PM 0.93 4557643 NP_000850.1 3-hydroxy-3-methylglutaryl-Coenzyme A reductase HMGCR 1 IACGQDAAQNVGSSNCITLM[147]EASGPTNEDLSV 1 47834348 NP_036424.2 minor histocompatibility antigen HA-1 HMHA1 1 QIQEVIRQSDQTIK

GRQDGSESEAVAVALAGRPM 0.69 9506785 NP_061815.1 homeo box (H6 family) 1 HMX1 1 M[147]PDELTEPGRSV 1 14043072 NP_112533.1 heterogeneous nuclear ribonucleoprotein A2\B1 isoform B1 HNRPA2B1 1 GGNFGFGDSR

GGGGNFGPGPGSNFRDDHDPVDKIVLQK

SV 1 14141152 NP_005959.2 heterogeneous nuclear ribonucleoprotein M isoform a HNRPM 1 M[147]AAGVEAAAEVAATEIKMGPLGLDHMASSIERMGPAMGPALGAGIERMGAGMGFGLER

PM 0.93 7019411 NP_037444.1 hook homolog 2; hook2 protein HOOK2 1 AGQLEATLTSCRPM 1 24497549 NP_061824.2 homeobox protein A10 isoform a HOXA10 1 MEPPDGPPPPPQQQPPPPPQPPQPAPQATSCSFSV 0.69 5031759 NP_005514.1 homeobox protein A11 HOXA11 1 RPESSSSPESSSGHTEDKAGGSSGQRSV 0.87 24497556 NP_008827.2 homeobox protein A7 HOXA7 1 EHKDEGPTAAAAPEGAVPSAAATAAADKSV 0.92 4826762 NP_005134.1 haptoglobin HP 2 GSFPWQAK

VGYVSGWGRVTSIQDWVQK

SV 0.75 40254816 NP_005339.2 heat shock 90kDa protein 1, alpha HSP90AA1 1 VTSPCCIVTSTYGWTANM[147]ERPM 1 4507677 NP_003290.1 heat shock protein 90kDa beta (Grp94), member 1 HSP90B1 2 GVVDSDDLPLNVSR

TETVEEPMEEEEAAKTDDEVVQRLGVIEDHSNREAESSPFVERESTAEKDELEVEEDEYKFAFQAEVNR

ELISNASDALDKDISTNYYASQKLSLNIDPDAKVFITDDFHDMMPK

SV 0.82 27436929 NP_005518.2 heat shock 70kDa protein 1-like HSPA1L 2 NQVAMNPQNTVFDAKRSDNQPGVLIQVYEGERAKIHDIVLVGGSTRATAGDTHLGGEDFDNRIINEPTAAAIAYGLDK

PM+SV 0.65 16507237 NP_005338.1 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) HSPA5 4 TKPYIQVDIGGGQTKDAGTIAGLNVMRVTHAVVTVPAYFNDAQRNQLTSNPENTVFDAKITITNDQNRTFAPEEISAM[147]VLTKELEEIVQPIISKDAGTIAGLNVM[147]RVTAEDKIINEPTAAAIAYGLDKTFAPEEISAMVLTKITPSYVAFTPEGERTKPYIQVDIGGGQTKSDIDEIVLVGGSTRTWNDPSVQQDIK

SV 1 24234686 NP_694881.1 heat shock 70kDa protein 8 isoform 2 HSPA8 1 NQVAMNPTNTVFDAKRSDNQPGVLIQVYEGERSQIHDIVLVGGSTR

PM 1 24234688 NP_004125.3 heat shock 70kDa protein 9B precursor HSPA9 1 DDIENM[147]VKAQFEGIVTDLIRQAASSLQQASLKDSETGENIRVEAVNMAEGIIHDTETKETGVDLTKYDDPEVQKEM[147]AGDNK

PM+SV 0.99 21314714 NP_078886.2 heat shock 27 kDa associated protein HSPBAP1 2 SEEPPSERM[147]GM[147]KSMSTVPQFETTCNY

PM 1 31542947 NP_002147.2 heat shock 60kD protein 1 (chaperonin) HSPD1 1 VGLQVVAVKVTDALNATRNAGVEGSLIVEKDGVTVAKLSDGVAVLKFGADARTVIIEQSWGSPKVGEVIVTKVGGTSDVEVNEKGYISPYDMAIATGGAVFGEEGL

PM 1 4504523 NP_002148.1 heat shock 10kDa protein 1 (chaperonin 10) HSPE1 1 GGEIQPVSVKVLQATVVAVGSGSKDGDILGKSAAETVTKDGDILGK

PM 1 7427517 NP_005520.2 perlecan HSPG2 1 RPGIVQSGGVVRAAGGPGPEQEASFTVTVPPSEGSSYR

SV 0.99 4504531 NP_000515.1 5-hydroxytryptamine (serotonin) receptor 1A HTR1A 1 QGDDGAALEVIEVHRVGNSKPM 0.66 51477156 XP_497119.1 HECT, UBA, and WWE domain containing 1 HUWE1 1 QLEAEADAIIQM[147]VREGQR

PM+SV 1 4504559 NP_002153.1 intercellular adhesion molecule 3 precursor ICAM3 4 TFVLPVTPPRQPAVEEPAEVTATVLASRIALETSLSKWEEELSRVLYGPKAAAP

SV 0.78 4504573 NP_001537.1 inhibitor of DNA binding 4, dominant negative helix-loop-helix protein ID4 1 CLAEHGHSLGGSAAAAAAAAAARPM 1 7705819 NP_057181.1 immediate early response 3 interacting protein 1 IER3IP1 1 NIGWGTDQGIGGFGEEPGIKPM 0.68 4557880 NP_000407.1 interferon gamma receptor 1 IFNGR1 1 GVKNSEWIDACINISHHY

EDDCDEIQCQLAIPVSSLNSQYPM 0.9 4504611 NP_000867.1 insulin-like growth factor 2 receptor IGF2R 1 TAAACVLSKTEGENCTVF

GHQAFDVGQPRPM+SV 0.93 4504683 NP_001548.1 interleukin 8 receptor beta IL8RB 3 ILAIHGLISK

DSRPSFVGSSSGHTSTTLSV 0.91 24234753 NP_004507.2 interleukin enhancer binding factor 3 isoform b ILF3 1 VADNLAIQLAAVTEDK

SIGTANRPM[147]GAGEALRSV 0.85 24234756 NP_703194.1 interleukin enhancer binding factor 3 isoform c ILF3 1 SIGTANRPM[147]GAGEALRSV 1 34328928 NP_899066.1 inosine monophosphate dehydrogenase 1 isoform b IMPDH1 1 LSEVM[147]TPR

IAQGVSGSIQDKGSIQKFGVPIIADGGIQTVGHVVKLPIVNDCDELVAIIAR

PM+SV 1 4504689 NP_000875.1 IMP (inosine monophosphate) dehydrogenase 2 IMPDH2 2 LPIVNEDDELVAIIARFGVPVIADGGIQNVGHIAK

PM 0.69 51458955 XP_375718.2 inositol polyphosphate-5-phosphatase, 75kDa INPP5B 1 RM[147]AITGDDVSLDQIVPVSRCAELELEM[147]PTPR

PM 0.74 51468854 XP_495889.1 integrator complex subunit 4 INTS4 1 TAGFSPDCIMDDAINILQNEKPM 0.85 44771201 NP_085131.1 integrator complex subunit 5 INTS5 1 VDTAM[147]PASVITTQGLAVPDTVREACDRPM 0.98 21361659 NP_060555.2 importin 9 IPO9 1 IPAGLCATAIDILTTVVRSV 1 4506787 NP_003861.1 IQ motif containing GTPase activating protein 1 IQGAP1 1 ALESGDVNTVWK

SKVDQIQEIVTGNPTVIKITLQDVVSHSKTLINAEDPPMVVVRKLIVDVIRQDKM[147]TNAK

PM 0.77 5729887 NP_006624.1 IQ motif containing GTPase activating protein 2 IQGAP2 1 EIEDIIEEVTVGYIRPM 0.68 7705841 NP_057207.1 interleukin-1 receptor-associated kinase 4 IRAK4 1 IVGTTAYMAPEALRPM 0.88 5031805 NP_005535.1 insulin receptor substrate 1 IRS1 1 VGNTVPFGAGAAVGGGGGSSSSSEDVKPM 0.67 38683860 NP_003740.2 insulin receptor substrate 2 IRS2 1 TASEGDGGAAAGAAAAGARPVSVAGSPLSPGPVR

GADDGYMPMTPGAALAGSGSGSCRSV 0.99 4504745 NP_000410.1 integrin alpha 2b precursor; platelet fibrinogen receptor, alpha subunit ITGA2B 1 IVLLDVPVRSV 0.65 4504747 NP_002195.1 integrin alpha 3 isoform a precursor ITGA3 1 MNITVKNDPGHHIIEDM[147]WPM 0.86 266394 Q00651 Integrin alpha-4 precursor ITGA4 1 SAWLRNGGADQGPRGIALR

PM+SV 0.93 51472885 XP_496142.1 integrin, alpha D ITGAD 1 TSPSQQSLVDPIVQLKPM+SV 1 4504759 NP_000623.1 Integrin, alpha-M (CD11B) ITGAM 4 ILVVITDGYAVYMVVLFHGTSGYAVYM[14QNTGMWTHTATGIR

GFGQSVVQLQGSRNDGEDSYRSQTETKVSTLQNQRFPEALRYVIGVGDAFRVVVGAPQEIVAANQRVQSLVLGAPRGFGQSVVQLQGSREFVSTVMEQLKAIM[147]EFNPRQELNTIASKPPRVM[147]QHQYQVSNLGQR

AIMEFNPREVARVMQHQYQVSNLGQRYAVYMVVTSHGVSTKLFHGTSGSGISPSHSQRYAVYM[147]VVTSHGVSTKQNTGMWESNANVKTHTATGIRKNAFK

PM+SV 1 34452173 NP_000878.2 integrin alpha X precursor ITGAX 2 VQSLVLGAPRIAPPASDFLAHIQK

PM 1 19743819 NP_391988.1 integrin beta 1 isoform 1D precursor ITGB1 1 SYCKNGVNGTGENGRKPM+SV 1 4557886 NP_000202.1 integrin beta chain, beta 2 precursor ITGB2 4 LGAILTPNDGR

SATTTVMNPKSATTTVMNPKFAESALNEITESGRLAENNIQPIFAVTSRLTEIIPKTVLPFVNTHPDKLAENNIQPIFAVTSRSAVGELSEDSSNVVHLIKIGFGSFVDKALNEITESGRGDCDGVQINVPITFQVKVNTHPDKLRAENNIQPIFAVTSRLLVFATDDGFHFAGDGKSNEFDYPSVGQLAHK

PM 1 31542984 NP_002209.2 inter-alpha (globulin) inhibitor H4 (plasma Kallikrein-sensitive glycoprotein) ITIH4 1 SPEQQETVLDGNLIIRSV 0.75 20127647 NP_085046.2 inter-alpha trypsin inhibitor heavy chain precursor 5 ITIH5 1 VYIHHMSPTGGTDINGALQR

AGKDVTGSPRPGGDGEGDPNHIERSV 0.81 10835023 NP_002213.1 inositol 1,4,5-triphosphate receptor, type 1 ITPR1 1 VTSQDVDNYKQIKSV 0.92 38327516 NP_689646.2 BTB and kelch domain containing 3 KBTBD3 1 NNFLVSEDHGQKPM 0.69 25952087 NP_002225.2 potassium voltage-gated channel, shaker-related subfamily, member 5 KCNA5 1 M[147]EIALVPLENGGAMTVRPM 0.77 24418457 O18868 Potassium voltage-gated channel subfamily B member 1 KCNB1 1 GGAAAAVAGLECATLLDRPM 0.89 6912444 NP_036415.1 potassium voltage-gated channel, subfamily G, member 2 KCNG2 1 EEEAAEARAGPTERGAQGSPARPM 0.99 13878557 Q9JHJ9 ATP-sensitive inward rectifier potassium channel 11 KCNJ11 1 TSYLADEILWGHRPM 0.79 13492973 NP_002242.2 potassium voltage-gated channel delayed-rectifier protein S1 KCNS1 1 DEDSDTPSSVDPCPDEISDVQRELARPM 0.99 13489099 NP_078957.1 potassium channel tetramerisation domain containing 17 KCTD17 1 M[147]EAGEAAPPAGAGGR

MEAGEAAPPAGAGGRPM+SV 0.7 42657585 XP_376472.1 PREDICTED: KIAA0319 KIAA0319 1 DWGLEEM[147]SEYSDDYR

PM 0.79 51465288 XP_376532.2 hypothetical protein LOC9729 KIAA0408 1 NVADLEEQNKRSV 1 47271354 NP_056025.1 KIAA0802 KIAA0802 1 RVDSITAAGGEGPFPTSRPM 0.99 31377671 NP_079452.2 hypothetical protein FLJ11792 KIAA0980 1 VDGPSLEAEMQALPK

QDLERAEKLGNSAPVSIETELMMEQVK

PM 0.77 51464197 XP_371706.3 PREDICTED: hypothetical protein KIAA1109 KIAA1109 1 ETNAVHVNVGAGSYDLPLM[147]PPPPDSCSM[147]KVTSEPQHVTLIVFGIGM[147]VNR

PM 0.76 25901062 NP_062539.1 hypothetical protein KIAA1434 KIAA1434 1 GAGNSTTTAQLAKPM 0.9 51474423 XP_371084.2 PREDICTED: KIAA1447 protein KIAA1447 1 NALYQSCHEDENDVQTISHKSV 0.81 37547942 XP_036299.7 hypothetical protein LOC57648 KIAA1522 1 SISEQRPPQAPK

VGPEEKM[147]GLPGSDSQKPM 0.98 51464407 XP_042661.7 hypothetical protein LOC57654 KIAA1530 1 RDHLPPPSSASPSRSV 0.88 51465266 XP_166320.3 hypothetical protein LOC57673 KIAA1553 1 M[147]EEVWHYECIPSIDERSV 0.92 51458844 XP_046531.5 hypothetical protein LOC57710 isoform 1 KIAA1614 1 GMEGTEAAAAKPAGGSPQGPKSV 0.83 17402886 NP_478144.1 HEAT-like repeat-containing protein isoform 1 KIAA1622 1 NIPISVPGPSSVTPSTSKEIKPM 0.97 51466572 XP_376680.2 similar to PHD finger protein 8 KIAA1718 1 M[147]AGAAAAVAAGAAAGAAAAAVSVAAPGR

SV 0.7 51464098 XP_291062.4 hypothetical protein LOC205717 KIAA2018 1 QLEEIQKTLQQEVQMQKK

PM 0.69 51460857 XP_291015.4 kinase D-interacting substance of 220 kDa KIDINS220 1 CEVELMARMAKLLNIVSVTGR

PM 0.79 42655960 XP_375825.1 kinesin family member 14 KIF14 1 ILEALETEKATAATGMNDK

PM 0.78 21314742 NP_112494.2 kinesin family member 18A KIF18A 1 EM[147]GLLSQNGHIPKPM 0.98 41393559 NP_904325.2 kinesin family member 1B isoform alpha KIF1B 1 EALLAEM[147]GVAIRPM 0.84 37546015 XP_050278.3 kinesin family member 26A KIF26A 1 DAPHGGPSLAPPSTTTSSR

APEEPGGGGTDGVARTPPVGMSGQVAGSPMLSV 0.75 41114119 XP_371354.1 similar to CG14535-PA KIF26B 1 AGPEAEAR

SVPGSSSQHSASPLVQSPSLQSSRPM+SV 0.96 30794488 NP_060046.1 kinesin family member 27 KIF27 2 EMGNAARHTGTTQM[147]NEHSSRSHAIF

GVGIGSM[147]AADSIEVSRSV 0.69 46852174 NP_008985.3 kinesin family member 3A KIF3A 1 SHAIFTITIECSEKGIDGNM[147]HVR

GTITVHKTDSSNEPPKPM 0.91 33589856 NP_878905.1 kinesin family member 9 KIF9 1 AEIQYCQHLVDQCRPM 1 34098674 Q96AC6 Kinesin-like protein KIFC2 KIFC2 1 TYSMEGPPEDPGIVPRPM 0.97 4507503 NP_003588.1 Kruppel-like factor 11 KLF11 1 AGPDDARAVDIMDICESILER

CITPPQSPDLVEPSTRTPVSPQVTDSKPM 1 7706477 NP_057369.1 Kruppel-like factor 12 isoform b KLF12 1 M[147]LM[147]LDGM[147]PAVR

ASSPTVITSVSSASSSSTVLTPGPLPM 0.93 31377546 NP_775755.2 zinc finger protein 393 KLF17 1 MSPPQQEMTIFSGPQLMPVGEPNIPRPM 0.95 21618357 NP_659196.1 kallikrein 11 isoform 2 precursor KLK11 1 CENAYPGNITDTMVCASVQEGGKSV 0.8 4504901 NP_002259.1 karyopherin alpha 4; importin alpha 3 KPNA4 1 VQNTSLEAIVQNASSDNQGIQLSAVQAARPM 1 51492789 XP_499389.1 PREDICTED: similar to KIAA1862 protein KRBA1 1 ATTPTDSSCSSGPTGDGVQGSPLPIKPM 0.78 33620775 NP_891556.1 kinectin 1; CG-1 antigen; kinesin receptor KTN1 1 EQMEAEIAHLKPM 0.69 27734414 P59178 Lethal(3)malignant brain tumor-like 2 protein L3MBTL2 1 CDM[147]SHHPTFRPM 0.96 2497295 Q61790 Lymphocyte activation gene-3 protein precursor (LAG-3) LAG3 1 WQCQLYEGQRPM 0.76 38788416 NP_005550.2 laminin, alpha 1 precursor LAMA1 1 IPSQQDALGGR

QGDQLM[147]AYGGKNPQCRICDGNSANPRIGGNIEVHVNPGDGTGLREAASHVLSK

PM 0.66 21264602 NP_005551.3 laminin alpha 5; laminin alpha-5 chain LAMA5 1 QVVPHERAEGARIAASATCGEEAPARQATGDYM[147]GVSLR

PM 0.79 7669503 NP_054701.1 Lysosome-associated membrane protein-2 LAMP2 1 SYAGYQTLPM 0.69 37595750 NP_002287.2 lamin B receptor LBR 1 VVEGTPLIDGRPM 1 25188199 NP_055608.2 leucine carboxyl methyltransferase 2 LCMT2 1 AQILSLGAGFDSLYFRLK

PM+SV 1 4504965 NP_002289.1 L-plastin LCP1 2 GDEEGVPAVVIDMSGLRMINLSVPDTIDERTINKNWMNSLGVNPR

SV 0.84 51459119 XP_377577.2 low density lipoprotein receptor class A domain containing 2 LDLRAD2 1 GPSPVPSQTGSTDAHTSRAGTGPSAEAMR

SV 0.72 39752663 NP_945339.1 leukocyte receptor cluster (LRC) member 9 LENG9 1 EPELPQEAPATEPAPPPACRQPHPGAPAPPGREAQPEAGAK

SV 1 4504983 NP_002297.1 galectin-3 LGALS3 1 IALDFQRGNDVAFHFNPRIQVLVEPDHFK

SV 0.81 4504379 NP_003658.1 leucine-rich repeat-containing G protein-coupled receptor 5 LGR5 1 DAGMFQAQDERPM 0.8 4504993 NP_002301.1 leukemia inhibitory factor receptor alpha, LIFR gene product LIFR 1 NISVSASSGTNVVF

NEQNVSLIPDTPEILNLSV 0.91 13324690 NP_077294.1 leukocyte immunoglobulin-like receptor 3 LILRA6 1 SHPSDPLEILPSGVSRSV 1 5031911 NP_005865.1 leukocyte immunoglobulin-like receptor 2 LILRB2 1 ADFQHPAGAVGPEPTDR

KADFQHPAGAVGPEPTDRAAVKDTQPEDGVEMDTR

SV 1 51463938 XP_067369.4 similar to abnormal cell LINeage LIN-41, heterochronic gene LIN41 1 HGGHSFIYLQEALQDSRPM 0.99 126357 P23702 Leukotoxin secretion ATP-binding protein LKTB 1 GEVIGIVGRSGSGKSTLTKPM 1 5803023 NP_006807.1 lectin, mannose-binding 2 LMAN2 1 DNVDDPTGNFRPM 0.84 22051591 XP_172995.1 PREDICTED: similar to HIDE1 LOC255809 1 GGQVVQLLQAPTDQRSV 1 41151097 XP_209178.3 PREDICTED: similar to 60S ribosomal protein L10 LOC284393 1 IFDLGR

NADEFEDMVAEKRPM 0.82 41195103 XP_373030.1 PREDICTED: hypothetical protein XP_373030 LOC285556 1 GPGSAYTDDGSETSEGSKPTSRSV 0.75 51474748 XP_290848.2 Myb protein P42POP LOC339344 1 TAASGGAM[147]ASAAAGEAEETTR

VEITPEPVSVVAAVVDGAVVAARPM 1 51460713 XP_292958.4 PREDICTED: similar to FoxI1c protein LOC344167 1 RSEASNGSTVAAGTSKSEEGLPM 1 51477621 XP_293325.3 PREDICTED: similar to brain protein 44-like LOC347411 1 STCCLQHFNGIQAKARPM 0.94 51493195 XP_370777.3 similar to lysophospholipase LOC374569 1 SPGSAGDAGGPKSV 1 41150665 XP_371023.1 PREDICTED: similar to ribosomal protein L13 LOC388344 1 VATWFNQPARSV 0.82 41190403 XP_373985.1 PREDICTED: hypothetical protein XP_373985 LOC388948 1 MQLGELTRSV 0.87 51464229 XP_374088.2 PREDICTED: hypothetical protein XP_374088 LOC389230 1 REM[147]ATTDSSCQKPM 0.84 51467255 XP_372159.2 PREDICTED: similar to CG15216-PA LOC389813 1 DSRPAGSGAPALAPPRPM 0.85 51471231 XP_372452.2 PREDICTED: similar to Peptidylprolyl isomerase A, isoform 1 LOC390299 1 ARPAGWAGR

EGMNIVEAM[147]KRPM 0.85 51466566 XP_374705.2 PREDICTED: similar to polycystic kidney disease 1 like 3 LOC393078 1 TLEGADSSGGHCGLASSPL

DPPSPAHGAGKTPHPHAGPGKPLENPSPAR

PM 1 51475816 XP_379479.2 hypothetical protein XP_379479 LOC401317 1 AGGSLSPVRGEDAGSPR

PM 0.76 11545811 NP_071380.1 hepatocellular carcinoma antigen gene 520 LOC63928 1 MGSRSSHAAVIPDGDSIRPM 0.98 51471105 XP_497341.1 PREDICTED: similar to mucin 19 LOC642613 3 TGLTGTSAQSAGVTMTSIQSAGVL

GAPGKAEDKSGDSQDAGGSKSSDGTTGTTRSGTTGPSVGGKTGLSAGVTGKVTGATGPSAGETGTTEPSTEGSVAAVLFVTGATGPSAGETGTTEPSTEGSVAAVLFVIGSETTRTGATSSEATSSEGMSGVTGQSLGSTAGSDSEITAKSGGFSYGSSSSGDLDRKK

SV 0.65 41149911 XP_062871.5 PREDICTED: similar to Centromeric protein E (CENP-E protein) LOC643677 1 QEDISM[147]TNLGSM[147]ACPIMEPLKLEMDNDSTVNQKYVTLGTPANSKESLKDSITQAKQNLDGHITEEK

PM 1 51472736 XP_496049.1 PREDICTED: similar to hypothetical protein FLJ35785 LOC653720 1 NQMAEPLPPEPPAVPSEVELPM 0.92 51492770 XP_291077.3 PREDICTED: hypothetical protein BC009862 LOC90113 1 LGPGVGQGDSATASCSPSPSSGSEGPGQVDSGRSV 0.83 40538772 NP_612373.2 hypothetical protein BC004337 LOC90826 1 DIAGIHLPTNVKSV 0.92 42789729 NP_006143.2 lymphoid-restricted membrane protein LRMP 1 M[147]NDDPSMEENGVERPM 0.93 32490559 NP_054764.2 low density lipoprotein receptor-related protein 10 LRP10 1 EGGAVGGQDGEQAPPLPIKAPLSV 0.93 5031971 NP_005815.1 leucine rich repeat containing 17 LRRC17 1 QIKSEQLCNEEEKSV 0.69 21361633 NP_060238.3 hypothetical protein FLJ20331 LRRC40 1 QATLIPDEVFDAVKPM 0.77 51458823 XP_496422.1 leucine rich repeat containing 52 LRRC52 1 HKSSEEDEDEAGTRVEVSRPM 0.66 31377705 NP_078824.2 leucine-rich repeats and IQ motif containing 2 LRRIQ2 1 AANENSVQMMRSEINTEVNEK

M[147]M[147]GVAKPM 0.71 14149720 NP_060855.1 large subunit GTPase 1 homolog LSG1 1 RAPAGGSLGRALMRPM 1 3041713 Q15722 Leukotriene B4 receptor 1 (LTB4-R) LTB4R 1 SGPAALEPGPSESLTASSPLK

ALAGQAAGLGLVGKRSLAVARPFVSQK

SV 0.65 4557733 NP_000419.1 latent transforming growth factor beta binding protein 2 LTBP2 1 STPLGQQQPAPRPM+SV 0.97 4505043 NP_002334.1 lactotransferrin; lactoferrin LTF 4 SNLCALCIGDEQGENK

THYYAVAVVKDSAIGFSRSEEEVAAR

TTYEKKDSAIGFSRDVTVLQNTDGNNNEAWAKDGAGDVAFIRSVNGKEDAIWVPPRIDSGLYVPSHAVVARKSEEEVAARKPVTEARRPVAAEVYGTERMDKVERRVPPR

PM+SV 1 4557894 NP_000230.1 lysozyme LYZ 4 STDYGIFQINSRATNYNAGDRWESGYNTRLGMDGYRAWVAWRGIFQINSRVVRDPQGIR

PM 0.81 23308699 NP_005452.2 transcription factor MAFB MAFB 1 PTSHPGPGPHATASATAAGGNGSVEDRFPM 1 21362092 NP_116106.2 lysophosphatidic acid acyltransferase theta MAG1 1 M[147]EGAELAGK

GSFEIGGTIHPVAIKGLEAIVEDEVTQRF

SV 0.68 51464912 XP_042066.8 mitogen-activated protein kinase kinase kinase 1 MAP3K1 1 RSPSPGNSPSGRSV 0.95 21735552 NP_006292.2 mitogen-activated protein kinase kinase kinase 12 MAP3K12 1 GEPPPPVGPGEGVGLLGTGR

TAVPPHEPGGPGSPGGLGGGPSAWPM 0.81 41281798 NP_705717.1 mitogen-activated protein kinase kinase kinase 7 interacting protein 1 isoform beta MAP3K7IP1 1 GEMSQPTPSPAPAAGGRVYPVSVPYPM 0.87 14149669 NP_055908.1 mitogen-activated protein kinase kinase kinase 7 interacting protein 2 isoform 1 MAP3K7IP2 1 VYISANAATGDEQVMRPM 0.88 47519639 NP_002366.2 microtubule-associated protein 4 isoform 1 MAP4 1 VSPEAVAEPPQPTAVPLELAKPM 0.91 13491174 NP_075385.1 MARCKS-related protein MARCKSL1 2 GDVTAEEAAGASPAK

GDVTAEEAAGASPAKPM 0.71 14043022 NP_004981.2 methionine-tRNA synthetase MARS 1 SITANYTDQWER

VNNVPHLGNIIGCVLSV 0.92 37620163 NP_065741.3 MASK-4E-BP3 protein MASK-BP3 1 LSVPASVVSRIM[147]GR

EVNQFPSDIECM[147]RPM 0.98 14149671 NP_055927.1 microtubule associated serine\threonine kinase 2 MAST2 1 NIGALPVDMVR

DEEAVGRSSGSSPAMETRGRLGSPQAIEEAASSSSAGPNLSLAPHPEVSQSVAPK

PM 0.84 51475014 XP_038150.4 microtubule associated serine\threonine kinase 3 MAST3 1 SRASSSGGSGGGSGGRSV 0.82 4505123 NP_002376.1 myelin basic protein MBP 1 HGFLPR

PM+SV 0.99 21735621 NP_005909.2 mitochondrial malate dehydrogenase precursor MDH2 2 VSSFEEKIQEAGTEVVKKGEDFVKIFGVTTLDIVRANTFVAELKVNVPVIGGHAGK

SV 0.99 4505145 NP_002387.1 malic enzyme 2, NAD(+)-dependent, mitochondrial ME2 1 SIVDNWPENHVKSV 0.9 4826830 NP_004983.1 methyl CpG binding protein 2 MECP2 1 EGKHEPVQPSAHHSAEPAEAGK

AETSEGSGSAPAVPEASASPKQRRPM 0.65 14192943 NP_115822.1 MEGF10 protein MEGF10 1 RDSPYAEINNSTSANRPM 0.66 4758710 NP_004518.1 mesenchyme homeo box 1 isoform 1 MEOX1 1 GKPEGSSKSV 1 5174553 NP_005917.1 microfibrillar-associated protein 1 MFAP1 1 NKTILPKSV 0.81 5174559 NP_005920.1 melanoma-associated antigen p97 MFI2 1 CLAEGAGDVAFVKPM 1 21431783 O43451 Maltase-glucoamylase MGAM 1 TLPAPLDHINLHVRPM 1 23503303 NP_699192.1 hypothetical protein MGC42105 MGC42105 1 KKALESVPVMMLPDPKPM 0.87 22035636 NP_665734.1 microsomal glutathione S-transferase 1 MGST1 1 SGPDPSTAILHFR

PM 0.78 7662284 NP_055447.1 flavoprotein oxidoreductase MICAL2 MICAL2 1 TPRVDGQTGENDMNKRPM 0.85 24308261 NP_065999.1 mesoderm induction early response 1 MI-ER1 1 VEGLHINGPTGGNKPM 1 11387366 Q9W4X9 Centromere\kinetochore protein zw10 (Mitotic 15 protein) MIT(1)15 1 LSLSYATKEPSSAHVRSV 0.97 24586653 NP_733751.1 myeloid\lymphoid or mixed-lineage leukemia 3 MLL3 1 SAVAR

TEVLSPNSKTSVSQIPFYSSDL

PM 0.67 6166555 O49621 MLO-like protein 1 MLO1 1 ENVLMHM[147]LPCSLDSRSV 1 6912508 NP_036461.1 monocyte to macrophage differentiation-associated MMD 1 SPTDFM[147]RPM 1 6042202 NP_009219.1 membrane metallo-endopeptidase; neprilysin MME 1 GGEPLLK

YGASWTAEKTEDIVAVQKHVVEDLIAQIR

SV 0.68 4505221 NP_002415.1 matrix metalloproteinase 8 MMP8 2 ISQGEADINIAFYQRSV 1 4826836 NP_004985.1 matrix metalloproteinase 9 MMP9 2 FTEGPPLHKDDVNGIR

AVIDDAFARQLSLPETGELDSATLKLGLGADVAQVTGALRQSTLVLFPGDLRHLYGPRFTEGPPLHK

SV 1 4505227 NP_002423.1 myeloid cell nuclear differentiation antigen MNDA 1 INQEEVGLAAPAPTARNKRNVPQNDPVTVVVLKNVPQNDPVTVVVLKIIEIANKTPK

PM+SV 1 4557759 NP_000241.1 myeloperoxidase MPO 4 NGFPVALVVLEGGI IANVFTNANNIFM[147]SNSYPR VDASMVYAVSNEIVRFPTDQLTPDQERIANVFTNAFRFPTDQLTPDQERQALAQISLPRNNIFM[147]SNSYPRQNQIAVDEIRVVLEGGIDPILRSPTLGASNRLFEQVM[147]RIPPNDPRNGFPVALARYQPM[147]EPNPRAVSNEIVRFPTDQLTPDQERVVLEGGIDPILRIANVFTNAFRNNIFM[147]SNSYPRVDASMVYGSEEPLARYGHTLIQPF

PM 0.68 21536464 NP_001923.2 palmitoylated membrane protein 3 MPP3 1 HSAVALAEDVM[147]EELQAASVHSDERSV 0.97 5453740 NP_006462.1 myosin regulatory light chain MRCL3 MRCL3 1 GEKLNGTDPEDVIRSV 0.68 31543161 NP_659452.2 G protein-coupled receptor MrgF MRGPRF 2 NGAVIM[147]AVRSV 0.89 13899231 NP_113608.1 mitochondrial ribosomal protein L9 MRPL9 1 LPEEPITRSV 0.83 11559927 NP_071383.1 mitochondrial ribosomal protein S14 MRPS14 1 KNTILPKPM 1 23110993 NP_006129.3 membrane-spanning 4-domains, subfamily A, member 3; (CD20) MS4A3 1 EEISSPPNSVSV 0.68 4504191 NP_000170.1 mutS homolog 6 MSH6 1 EEGSSDEISSGVGDSESEGLNSPVKSV 1 4505255 NP_002433.1 musashi 1 MSI1 1 METDAPQPGLASPDSPHDPCK

PM+SV 0.99 4505257 NP_002435.1 moesin MSN 4 ALELEQEESEAVEWFVIKPIDKTQEQLALTQEQLALEM[147]AEAQMVQEDLEKALTSELANARIGFPWSEIR

SGYLAGDKESEAVEWQQKAQSEAEKLAKFVIKPIDKAQM[147]VQEDLEKKPDTIEVQQMKNISFNDKKVTAQDVRLKQIEEQTKYGDFNKAQSEAEKIGFPWSEIRESEAVEWQQKFVIKPIDKTQEQLALEMAELTARTQEQLALEM[147]AELTARISQLEM[147]ARRKPDTIEVQQMKRKPDTIEVQQM[147]K

PM 1 3183223 O26533 Hypothetical protein MTH433 MTH_433 1 HLRDNSTWFYINKPM+SV 0.91 19913412 NP_005106.2 major vault protein , MVP 4 AQQLAEVEVKK

HADLEIRGPLEYVPSAKVASGPSPGEGISPQSAQAPQAPGDNHVVPVLRAEAARIEGEGSVLQAKGAVASVTFDDFHKFKQM[147]TEAIGPSTIRDLAVAGPEM[147]QVKEVEVVEIIQATIIRAQLELEVSKIEGEGSVLQAKSVQLAIEITTNSQEAAAKGAVASVTFDDFHK

SV 0.66 7669506 NP_005954.2 myosin heavy chain IIx\d MYH1 1 QQEISDLTEQIAEGGKSV 0.82 33563340 NP_079005.2 myosin heavy chain 14 MYH14 1 DEGEEEAEVELAESGRPM 0.76 42656791 XP_036988.9 PREDICTED: similar to Myosin heavy chain, cardiac muscle alpha isoform (MyHC-alp MYH15 1 ENQSILFTGESGAGK

EIDDLETMLVKPM+SV 1 12667788 NP_002464.1 cellular myosin heavy chain, type A MYH9 2 HEM[147]PPHIYAITDTAYR

TLEEEAKTHEAQIQEMRSMEAEMIQLQEELAAAERQAQQERDELADEIANSSGKTEMEDLMSSKDDVGKHSQAVEELAEQLEQTKAGVLAHLEEERVKLQEMEGTVKQLEEAEEEAQRANASRADEWLMKVKLQEM[147]EGTVKSGIKGLSLTGSLAVR

PM+SV 1 17986262 NP_524148.1 smooth muscle and non-muscle myosin alkali light chain isoform 4 MYL6 2 VFDKEGNGTVMGAEIRVFDKEGNGTVMGAEIRALGQNPTNAEVLK

SV 0.74 23111009 NP_002469.2 myogenic factor 3 MYOD1 1 KPEEHSHFPAAVHPAPGARSNCSDGMMDYSGPPSGARR

SV 0.67 4505315 NP_003961.1 myomesin 2 MYOM2 1 EVSDSEIHRSV 0.93 5174607 NP_005958.1 EGR1 binding protein 2 NAB2 1 APSPTAEQPPGGGDSARPM 0.73 20532181 Q9LEM8 PsbD mRNA maturation factor Nac2, chloroplast precursor NAC2 1 ADWASMETDLGNTGLAR

SV 0.99 5174613 NP_005960.1 nucleosome assembly protein 1-like 4 NAP1L4 1 DNVPHTPSSYIETLPKPM 0.97 46409588 NP_997364.1 Nck-associated protein 5 isoform 2 NAP5 1 M[147]EETVR

EETVNIMVYQEKPM 0.93 32307126 NP_858045.1 nuclear receptor coactivator 3 isoform a NCOA3 1 LSNTDATGLEEIDR

ELQPQVEGVDNKPCDTPGQGLTCSGEK

SV 1 24638433 NP_056146.1 nicastrin NCSTN 1 ALADVATVLGRPM 0.98 4758790 NP_004543.1 NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa NDUFS5 1 FGLNIDRSV 1 10835025 NP_066552.1 NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa NDUFV2 1 NSDSILEAIQKKSV 0.95 4758794 NP_004534.1 nebulin NEB 1 NKKAM[147]EIISEK

MVGFQSLQDDPKEDVSPGTAIGKTPEMMRRPDAIPIVAAKSSRVHIMPDIPQIILAK

SV 0.66 4505373 NP_002488.1 NIMA (never in mitosis gene a)-related kinase 2 NEK2 1 SQDSSPVLSELKPM 1 21704287 NP_542779.2 sialidase 4; neuraminidase 4 NEU4 1 WLSM[147]GVPRPM 1 128110 P24787 Vasotocin-neurophysin VT precursor NEUV 1 LMHLANRQQQGKQPGLPM 0.89 26787991 NP_004998.2 nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1 NFKBIL1 1 VMGAVTALSQALNRPM 0.97 21361743 NP_060846.2 nipsnap homolog 3B NIPSNAP3B 1 YDNFAHRSV 0.78 9910460 NP_064587.1 nitrilase family, member 2; Nit protein 2 NIT2 1 ECSIYLIGGSIPEEDAGKPM 0.74 13375676 NP_078804.1 NF-kappaB activating protein NKAP 1 YGHALLPGEGAAMAEYVKSV 0.91 51466727 XP_070619.8 PREDICTED: similar to homeobox protein NKX2-6 NKX2-6 1 ASAAQISVAQQRPR

M[147]GEPQPGLNAASPLGGGTRMGEPQPGLNAASPLGGGTR

PM 0.69 20139130 Q9BYT8 Neurotensin endopeptidase NLN 1 FDIEMSM[147]RGDIFERFDIEMSMRGDIFERFDIEM[147]SM[147]RGDIFER

PM 0.99 21264553 Q11088 Hypothetical protein C01C4.1 in chromosome X precursor NLP1 1 RM[147]DPNAFRMSFGKPM 0.95 24212101 P59044 NACHT-, LRR- and PYD-containing protein 6 NLRP6 1 M[147]DQPEAPCSSTGPRSV 0.97 4505409 NP_002503.1 nucleoside-diphosphate kinase 2 NME2 1 VM[147]LGETNPADSKPGTIR

TFIAIKPDGVQRSV 0.79 37540622 XP_035572.2 probable nucleolar complex protein 14 NOL14 1 M[147]NVEEDVQEEQSK

M[147]QLSEIMERDAERPM 0.93 7706254 NP_057018.1 nucleolar protein NOP5\NOP58 NOP5/NOP58 1 M[147]M[147]AIAPNVTVM[147]VGELVGARPM 1 11136626 NP_056533.1 NADPH oxidase 3 NOX3 1 NLISFIRPM 1 7019469 NP_037521.1 NPC1-like 1 NPC1L1 1 AEEAVAAVM[147]VASCPNHPSRSV 0.95 4505445 NP_000900.1 neuropeptide Y receptor Y1 NPY1R 1 NNMM[147]DKMRDNK

DDDYETIAMSTMHTDVSKSV 0.86 36950991 NP_003289.2 nuclear receptor subfamily 2, group C, member 2 NR2C2 1 IQIVTDSASVERPM 0.72 4505477 NP_002522.1 neurotensin receptor 1 NTSR1 1 IFPM[147]VVISVLNTIIANKSV 0.79 20149583 NP_009014.2 nudix-type motif 6 isoform a NUDT6 1 FPGGLSEPEEDIGDTAVRSV 0.65 5453820 NP_006176.1 nuclear mitotic apparatus protein 1 NUMA1 1 ASMQPIQIAEGTGITTR

VAEQERTAQQLRSV 0.76 7705951 NP_057443.1 nucleolar and spindle associated protein 1 NUSAP1 1 ENNYLNQHVNRPM 0.76 21361724 NP_061168.2 nuclear transport factor 2-like export factor 2 NXT2 1 EEVVTPTLPEHTATRSV 0.98 40255314 NP_443075.1 obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF OBSCN 1 DPKILTHNGR

TVLQAGGNVGLEQEGTVHRGPDEPEEKPASDVHEQLVPPRTSAQFFVEEQSITIVREDAGQITVEAEGASSSAALRVR

SV 0.7 51464323 XP_371717.2 PREDICTED: odz, odd Oz\ten-m homolog 3 ODZ3 1 MAVNVTYSSTGQIASIQRALENGINVTVSQSTTVVNGRDSHYQTEPHVLAGTANPTVAK

PM 0.81 4505493 NP_002532.1 oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) OGDH 1 SSENGVDYVIMGMPHRPM+SV 0.81 51466766 XP_291266.4 5-oxoprolinase (ATP-hydrolysing) OPLAH 1 ELGFTHVSLSSEAMPMVR

PM 0.92 37541146 XP_166900.3 Olfactory receptor 4D6 OR4D6 1 M[147]TLPM[147]DTTISINNTVITPM[147]LNPIIYPM 0.88 8923380 NP_060277.1 O-sialoglycoprotein endopeptidase OSGEP 1 ISNDPSPGYNIEQMAKR

SV 0.73 10092621 NP_065391.1 oncostatin M precursor OSM 1 AGRGASQPPTPTPASDAFQRPM 0.71 24638435 NP_653273.2 otoancorin ,otoancorin OTOA 1 THSWQDAPASAGPTRPM 0.89 20139164 Q9ESF1 Otoferlin (Fer-1 like protein 2) OTOF 1 VEVTDTLM[147]DDSNAIIK

VLENCEGVADFDETFRPM+SV 0.69 20070125 NP_000909.2 protein disulfide isomerase\oxidoreductase P4HB 3 VIEFTEQTAPK

SNFAEALAAHKM[147]DSTANEVEAVKMDSTANEVEAVKTVIDYNGEREADDIVNWLKNGDTASPKVDATEESDLAQQYGVRALAPEYAKSVSDYDGKFFPASADRVDATEESDLAQQYGVREADDIVNWLKTVIDYNGERITEFCHR

SV 0.65 4758876 NP_004634.1 poly(A) binding protein, nuclear 1; poly(A) binding protein 2 PABPN1 1 M[147]AAAAAAAAAAGAAGGRPM 0.76 30089916 NP_060496.2 phosphofurin acidic cluster sorting protein 1 PACS1 1 PHSGEAQLSGTMAMTVVTKEK

NPSDSGPEMEETESILSTPKSQVIEGISRCNCNSSM[147]PRPVKVAAVGGQSY

SV 1 6912576 NP_036519.1 peptidyl arginine deiminase, type IV PADI4 1 VQISYYGPKVMGPDFGYVTRTLPVVFDSPRVM[147]GPDFGYVTR

PM 0.86 4505601 NP_002569.1 p21-activated kinase 3; hPAK3 PAK3 1 LIATNGTPELQNPERPM 0.73 6005709 NP_009134.1 PALM2-AKAP2 protein isoform 1 PALM2-AKAP2 1 EDIVTEQIDFSAAR

SPGALETPSAAGSQGNTASQGKPM 0.98 24307991 NP_055904.1 p53-associated parkin-like cytoplasmic protein PARC 1 CVHQAQAVPVRPDHCPVCVSPLGCDDDL

NITQCWLSVVQEQVSRSV 1 5031977 NP_005737.1 pre-B-cell colony enhancing factor 1 isoform a PBEF1 1 NAQLNIELEAAHHSV 0.96 5453854 NP_006187.1 poly(rC) binding protein 1 PCBP1 1 SIQGQHTISPLDLAKPM 0.99 9966883 NP_065136.1 cadherin superfamily protein VR4-11 PCDH9 1 AVDVDTGMNAELKY

VPLSAIPGSVVAEVFAVDVDTGM[147]NAELNFVTIEESKPDDAVHEPINGTISL

PM 0.93 8850232 NP_003726.1 cadherin 21 PCDHGA12 1 ISENAATEM[147]RPM 0.92 33620745 NP_056969.2 pre-mRNA cleavage complex II protein Pcf11 PCF11 1 QDIRDPR

SPEEPSTPGTVVSSPSISTPPIVPDIQKNELQEPCDSPKQDTITEESEK

PM 0.87 51492880 XP_168530.4 Piccolo (Aczonin) PCLO 1 SQESEELVVTGGGGLRPLSKVSSIAVQTVAEISVQTEPVGTIR

SV 0.65 34878902 NP_006188.2 pericentriolar material 1 PCM1 1 LPEM[147]EPLVPRVTNDISPESSPGVGRRR

PM 1 31317307 NP_777596.2 proprotein convertase subtilisin\kexin type 9 preproprotein PCSK9 1 LPQANCSVHTAPPAEASMGTRVHCHQQGHVLPM 1 33620751 NP_057381.2 prenylcysteine oxidase 1 PCYOX1 1 TTDNSDLFINSIGIVPSVRSV 1 20070127 NP_000912.2 phosphodiesterase 3A, cGMP-inhibited PDE3A 1 SSSVVSAEMSGCSSKSHRPM 0.98 51458750 XP_378185.2 phosphodiesterase 4D interacting protein PDE4DIP 1 ETCGRSENEAEREETTSPECEEHNSLPM 0.75 5453870 NP_006197.1 platelet-derived growth factor receptor alpha precursor PDGFRA 1 IRAKEEDSGHY

PM+SV 1 21361657 NP_005304.3 glucose regulated protein, 58kDa PDIA3 4 SEPIPESNDGPVKEATNPPVIQEEKPKTADGIVSHLKLSKDPNIVIAKEATNPPVIQEEKPKK

LAPEYEAAATRDPNIVIAKTVAYTEQKSEPIPESNDGPVKYDVDYEKTDDNFESRDGEEAGAYDGPR

PM+SV 0.98 5031973 NP_005733.1 protein disulfide isomerase A, member 6 PDIA6 4 GSTAPVGGGAFPTIVERTGEAIVDAALSALRLAAVDATVNQVLASRGESPVDYDGGR

PM 0.68 46559761 NP_115901.2 PDZ domain containing 4 PDZD4 1 VGEVNPNSIAAKDGRIRPM+SV 0.99 4826898 NP_005013.1 profilin 1 PFN1 3 TFVNITPAEVGVLVGK

VNITPAEVGVLVGKDRSV 1 4505763 NP_000282.1 phosphoglycerate kinase 1 PGK1 1 VDFNVPMKNNQITNNQRPM 0.71 32129516 Q9NXG6 Putative HIF-prolyl hydroxylase PH-4 PH4 1 WIANNWINVDPSRPM 0.73 51465314 XP_376540.2 phosphatase and actin regulator 2 PHACTR2 1 SM[147]VPPPPVAPAPSPLAPPLPLPM 0.98 6005854 NP_009204.1 prohibitin 2 PHB2 1 EYTAAVEAK

IVQAEGEAEAAKPM 0.88 11038624 NP_004417.1 polyhomeotic 1 homolog PHC1 1 RSSSDIAR

M[147]ETESEQNSNSTNGSSSSGGSSRPQIAQMSLYPM 0.89 51467610 XP_045308.4 PHD finger protein 19 PHF19 2 SDVDSTDAASTSGSASTSLSYDSRPM 0.77 19923462 NP_057705.2 PHD finger protein 21A PHF21A 1 TVTTASMITTKPM 0.76 5453882 NP_006204.1 phosphorylase kinase, gamma 1 (muscle) PHKG1 1 EVCGTPSYLAPEIIECSM[147]NEDHPGYSV 0.68 24430186 NP_714969.1 phosphatidylinositol glycan, class C PIGC 1 M[147]YAQPVTNTKEVKPM 0.96 15451926 NP_002637.2 phosphoinositide-3-kinase, class 2, beta PIK3C2B 1 SPQEGPPNHSTSQGPQPGSDPWPKSV 0.83 5453892 NP_006209.1 phosphoinositide-3-kinase, catalytic, alpha PIK3CA 1 QM[147]NDAHHGGWTTK

QNNEIIFKPM+SV 0.72 4505815 NP_003548.1 phosphatidylinositol-4-phosphate 5-kinase, type I, alpha PIP5K1A 1 RPM[147]ASEVPYASGMPIKK

AQVTTKAEVEPGVHLGRM[147]SIHNIDHAQR

SV 0.88 5453908 NP_006215.1 phosphotidylinositol transfer protein, alpha PITPNA 1 QLDEMRQLDEM[147]R

SV 0.87 24308237 NP_065896.1 PYK2 N-terminal domain-interacting receptor 3 PITPNM2 1 GDANTIANVFDTVMRVHYTDAGENPDVFNLSPVEK

SV 0.82 19923084 NP_612152.1 polycystin-1L1 PKD1L1 1 KPPNRESQSPSSSASR

SV 1 33286422 NP_872271.1 pyruvate kinase 3 isoform 2 PKM2 1 APIIAVTRSV 0.8 4758932 NP_004563.1 plakophilin 2 PKP2 1 LEVAELNGVPRSV 0.84 4505851 NP_003697.1 phospholipase A2, group IVC PLA2G4C 2 IEADEAPVVAVLGSGGGLRPM 0.81 12083581 NP_056007.1 phosphoinositide-specific phospholipase C beta 1 isoform a PLCB1 1 VETALEACSLPSSR

EVIEAIAECAFKPM 0.9 5453912 NP_006217.1 phospholipase C-like 1 PLCL1 1 QPLDFMEGNQNTPRPM 0.65 20139135 Q9C5Y0 Phospholipase D delta PLDDELTA 1 VTAFIGGLDLCDGRSV 0.99 47607492 NP_000436.2 plectin 1 isoform 1 PLEC1 1 LSVAAQEAAR

GYFSEEMNRNLVDNITGQR

PM 0.84 2499860 Q29485 Plasminogen precursor PLG 1 VVLGAHQETRPM+SV 1 4505893 NP_002659.1 proteolipid protein 2 PLP2 4 HTAAPTDPADGPV

SV 0.66 10863877 NP_066928.1 phospholipid scramblase 1 PLSCR1 1 IIDNMGQEVITLSV 0.68 40255005 NP_116201.7 plexin domain containing 2 precursor PLXDC2 1 M[147]ANFDPSVSRNSTVRSV 0.92 5032223 NP_005752.1 plexin C1 PLXNC1 1 DVIQVSHVLNDTHM[147]KPM 0.91 26051278 NP_742017.1 nuclear pore membrane protein 121 POM121 1 GGSAAPAGSGSFGINVATPGSSTTTGAFSFPM 1 19923106 NP_000437.3 paraoxonase 1; Paraoxonase PON1 1 DVSSFNPHGISTFTDEDNAM[147]YPM 0.91 27545319 NP_002690.2 POU domain, class 3, transcription factor 1 POU3F1 1 AQAAYPGGGGGGLAGM[147]LSV 0.84 31543392 NP_573570.2 peroxisome proliferator-activated receptor gamma coactivator 1 beta PPARGC1B 1 ADPGAPVSQEDM[147]QAMVQLIRPM 0.7 4505983 NP_003617.1 protein tyrosine phosphatase, receptor type, f polypeptide interacting protein alpha 1 iso PPFIA1 1 VTSSM[147]SSPSMQPK

GLAAGSAETLPANFPM 0.92 51458872 XP_046751.7 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein, PPFIA4 1 DGAAEEEGTVELGPKPM 0.92 12643420 P49599 Protein phosphatase 2C PPH1 (PP2C) PPH1 1 HGNVQLACESLAQVALDRSV 1 10863927 NP_066953.1 cyclophilin A PPIA 1 VKEGMNIVEAMER

PM+SV 0.99 4758950 NP_000933.1 cyclophilin B PPIB 2 TVDNFVALATGEKDTNGSQFFITTVKIEVEKPFAIAKIGDEDVGR

SV 0.84 4505997 NP_003611.1 protein phosphatase 1D PPM1D 1 STVIDQIPFLAVARTMTGLPSTSGTTASVVIIRGM[147]K

SV 0.77 42659968 XP_350881.3 protein phosphatase 1H (PP2C domain containing) PPM1H 1 LYVANAGDSRPM+SV 1 5802974 NP_006784.1 peroxiredoxin 3 isoform a precursor PRDX3 2 HLSVNDLPVGR

GLFIIDPNGVIKPM 0.83 40254808 NP_005032.2 perforin 1 precursor PRF1 1 HVTRAKVSSTEAVARSV 1 46276889 NP_002719.3 eosinophil granule major basic protein PRG2 2 FQWVDGSR

SLQTFSQAWGNLVSIHNFGNLVSIHNFNINYNFAYW

PM+SV 0.99 5031925 NP_005798.1 megakaryocyte stimulating factor PRG4 2 EPSPTTPKAPTTTKEPTSTTSDKPAPTTPKQEPVQKCPGREPAPTTPKEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPK

PM 0.68 4506067 NP_002728.1 protein kinase C, alpha PRKCA 1 M[147]ADVFPGNDSTASQDVANRSV 0.87 13384594 NP_002730.1 protein kinase C, gamma PRKCG 1 MGPSSSPIPSPSPSPTDPKRSV 1 13654237 NP_008835.5 protein kinase, DNA-activated, catalytic polypeptide PRKDC 1 M[147]QLVCCRAIVK

HGDLPDIQIKGTGAAGNRTSPQEGERM[147]DPM[147]NIWDDIITNR

PM 0.78 5453978 NP_006250.1 protein kinase, cGMP-dependent, type II; cGKII PRKG2 1 LQDVVHM[147]QGGSPLQASPDKQTVAIAELTEELQNK

PM 0.92 40254869 NP_056444.2 pre-mRNA processing factor 31 homolog PRPF31 1 M[147]PACNIM[147]LLGAQRQSVVYGGKSTIR

PM 0.89 24431950 NP_004688.2 PRP4 pre-mRNA processing factor 4 homolog PRPF4 1 QINVSTDDSEVKACLRPM 0.89 40807485 NP_036601.2 PRP6 pre-mRNA processing factor 6 homolog PRPF6 1 HTWM[147]EDADSCVAHNALECARPM 0.81 8922157 NP_060927.1 proline-rich 13, DKFZp564J157 protein PRR13 1 NPNAGQPGPNPYPPNIGCPGGSNPAHPPPINPPF

PM+SV 1 7382458 NP_002768.2 proteinase 3 PRTN3 2 LVNVVLGAHNVRTQEPTQQHFSVAQVF

SV 1 32490589 NP_870998.1 periaxin PRX 1 ASRGQEGDAAPKSPVRSV 0.9 21314635 NP_002775.2 pregnancy specific beta-1-glycoprotein 9 PSG9 1 M[147]GPLPAPSCTQRPM 0.9 4506179 NP_002777.1 proteasome alpha 1 subunit isoform 2 PSMA1 1 AQPAQPADEPAEKADEPM[147]EHSV 1 23110942 NP_002781.2 proteasome alpha 5 subunit PSMA5 1 AIGSASEGAQSSLQEVYHKSV 1 4506195 NP_002785.1 proteasome beta 2 subunit PSMB2 1 NGIHDLDNISFPKPM 0.75 23110925 NP_002789.1 proteasome beta 6 subunit PSMB6 1 MAGIIIAGWDPQEGGQVYSVPM[147]GGM[147]M[147]VRSV 1 4506209 NP_002794.1 proteasome 26S ATPase subunit 2 PSMC2 1 IINADSEDPKYIINVKSV 1 24430160 NP_002797.2 proteasome 26S ATPase subunit 6 PSMC6 1 IHIDLPNEQARL

VVSSSIVDKYIGESARHGEIDYEAIVK

SV 1 28872725 NP_002806.2 proteasome 26S non-ATPase subunit 11 PSMD11 1 VQIEHISSLIKSV 0.99 25777602 NP_002799.3 proteasome 26S non-ATPase subunit 2 PSMD2 1 VGQAVDVVGQAGKPKSV 0.89 25777615 NP_002802.2 proteasome 26S non-ATPase subunit 7 PSMD7 1 DIKDTTVGTLSQRSV 0.71 23503261 NP_699167.1 phosphoseryl-tRNA kinase PSTK 1 RIVSQTM[147]KEAK

LQQEQGWAIGVVAYSV 0.65 4506247 NP_000255.1 patched homolog 1 PTCH1 2 DGLDLTDIVPR

TYVEVVHQSVAQNSTQKPM 1 29427539 Q9BMN8 Protein-tyrosine phosphatase Lar-like precursor PTP3 1 IVVSWRPPSEEK

PM 0.72 5453992 NP_006255.1 protein tyrosine phosphatase, non-receptor type 13 isoform 2 PTPN13 1 ISKVPSTPVHLTNEM[147]KGDQTWQESQHGSPSPSVISK

SV 0.87 4506291 NP_002819.1 protein tyrosine phosphatase, non-receptor type 2 isoform 1 PTPN2 1 M[147]GLIQTPDQLRPM 1 33112650 P08575 Leukocyte common antigen precursor (L-CA) (CD45 antigen) PTPRC 1 YDLQNLKPYTK

SEAAHQGVITWNPPQRRDPPSEPSPLEAEFQR

PM 1 18641347 NP_002829.2 protein tyrosine phosphatase, receptor type, C isoform 1 PTPRC 1 SEAAHQGVITWNPPQRTLILDVPPGVEKDPPSEPSPLEAEFQR

PM+SV 0.99 18860900 NP_002834.2 protein tyrosine phosphatase, receptor type, J (CD148) PTPRJ 4 TPSSTGPSPVFDIKAVSISPTNVILTWKAGSPTAPVHDESLVGPVDPSSGQQSRVITEPIPVSDLRTTGEAGHPSADVLKRTPEQGSNGTDGASQKVIKVITEPIPVSDLR

PM 0.84 4506329 NP_002842.1 protein tyrosine phosphatase, receptor-type, Z polypeptide 1 PTPRZ1 1 TNRSPTRGSEFPM 0.94 5360210 NP_002847.1 nectin 2 PVRL2 1 SPGGAGGGASGDGGFYDPKSV 1 42476166 NP_002854.2 glycogen phosphorylase, liver PYGL 1 GIVGVENVAELKKPM 0.77 30911103 NP_056432.1 pygopus 1 PYGO1 1 NVNRNNAVNQENSRSSSTEATNNNPANGTQNKSV 1 4758984 NP_004654.1 Rab 11A RAB11A 1 RDHADSNIVIMLVGNK

AQIWDTAGQERSTIGVEFATR

SV 0.98 19923483 NP_057406.2 Rab14 RAB14 1 NLTNPNTVIILIGNKSV 0.71 38371739 NP_941959.1 Rab-15 RAB15 1 IQIWDTAGQER

PM+SV 1 13569962 NP_112243.1 Rab1B RAB1B 3 NATNVEQAFM[147]TM[147]AAEIKMGPGAASGGERPNLKNATNVEQAFMTMAAEIK

PM 1 33589861 NP_006859.2 Rab31 RAB31 1 NAINIEELFQGISRSV 0.7 5803135 NP_006852.1 Rab35 RAB35 2 LLIIGDSGVGKSV 1 19923790 NP_036546.2 rab3 GTPase-activating protein, non-catalytic subunit RAB3GAP2 1 LTSALFNAASGWLGWKSKPM 0.96 4506371 NP_002859.1 Rab5B RAB5B 1 GVDLHEQSQQNK

PM+SV 0.75 41393545 NP_004574.2 Rab5C RAB5C 2 GVDLQENNPASRQASPNIVIALAGNK

PM+SV 0.96 34147513 NP_004628.4 Rab7 RAB7 2 EAINVEQAFQTIARSV 1 4826962 NP_005043.1 Rac3 RAC3 1 TVFDEAIRPM 0.7 21361397 NP_037409.2 Rac GTPase activating protein 1 RACGAP1 1 TTVTVPNDGGPIEAVSTIETVPYWPM 0.75 20143952 NP_002870.2 RAD52 homolog isoform alpha RAD52 1 EAVTDGLKPM 0.85 5803145 NP_006779.1 ralA binding protein 1 RALBP1 1 ETKM[147]NIQNISIVLSPTVQISNR

QTASVTLQAIAAQNAAVQAVNAHSNILKPM 0.88 4506413 NP_002875.1 RAP1A RAP1A 1 SKINVNEIF

LVVLGSGGVGKPM+SV 1 7661678 NP_056461.1 RAP1B RAP1B 2 LVVLGSGGVGK

VKDTDDVPM[147]ILVGNKVKDTDDVPMILVGNKSKINVNEIF

PM 1 20070215 NP_006096.2 RAP guanine-nucleotide-exchange factor 3 RAPGEF3 1 GPDALLTVALRKPPGQRSV 0.92 8922733 NP_060724.1 REST corepressor 3 RCOR3 1 MEGGIEEFKPPESNQKPM 0.95 15559211 NP_005603.2 RE1-silencing transcription factor REST 1 SDNMSEGSDDSGLHGARPVPQESSRSV 0.68 38327605 NP_940832.1 regulator of G-protein signalling 12 isoform 4 RGS12 1 QNTAVNSSSRSV 0.69 21361149 NP_002915.2 regulator of G-protein signalling 7 RGS7 1 KMEDVIARMQDEKSV 0.96 10835049 NP_001655.1 RhoA RHOA 1 DGVREVFEMATRPM 0.68 28629866 NP_055651.1 Rho-related BTB domain containing 1 RHOBTB1 1 ILSVDPEEEREEGPPRPM 1 19923580 NP_068749.2 Rad50-interacting protein 1 RINT-1 1 DITDVDEMKVPDCAETFMTLSV 0.93 47716512 NP_115622.2 ring finger and KH domain containing 3 RKHD3 1 NGSGGGGGGSSGGGETLDDQR

RIQQQTHTYIVTPSRSV 0.98 4506549 NP_002925.1 ribonuclease, RNase A family, 2 RNASE2 2 DPPQYPVVPVHLDR

PM+SV 1 45243507 NP_002926.2 ribonuclease, RNase A family, 3 RNASE3 3 AIQHISLNPPRYPVVPVHLDTTI

SV 0.97 4506569 NP_002932.1 roundabout 1 isoform a ROBO1 1 DPSSSSSMSSRGSGSRQRQDCPEETGHMQHQPDRRR

SV 1 4885583 NP_005397.1 p160-ROCK ROCK1 1 NLESTVSQIEKEKPM 0.72 4506591 NP_000320.1 retinal pigment epithelium-specific protein 65kDa RPE65 1 ESNETMGVWLHIADKSV 0.92 15431288 NP_009035.3 ribosomal protein L10a RPL10A 1 AVDIPHMDIEALKKSV 1 4506607 NP_000970.1 ribosomal protein L18 RPL18 1 TAVVVGTITDDVRVQEVPKSV 1 4506609 NP_000972.1 ribosomal protein L19 RPL19 1 VWLDPNETNEIANANSRSV 1 4506613 NP_000974.1 ribosomal protein L22 RPL22 1 ITVTSEVPFSKRSV 1 4506605 NP_000969.1 ribosomal protein L23 RPL23 1 NLYIISVK

FEDNAGVIVNNKGEMKSV 1 17105394 NP_000975.2 ribosomal protein L23a RPL23A 1 IEDNNTLVFIVDVK

VNTLIRPDGEKSV 1 4506619 NP_000977.1 ribosomal protein L24 RPL24 1 AITGASLADIM[147]AKR

AITGASLADIMAKRPM+SV 1 13904866 NP_000982.2 ribosomal protein L28 RPL28 2 TVGVEPAADGKGVVVVIK

SV 1 16579885 NP_000959.2 ribosomal protein L4 RPL4 1 AVSELAGHQTSAESWGTGRSV 1 14591909 NP_000960.2 ribosomal protein L5 RPL5 1 NSVTPDMMEEMYKK

GAVDGGLSIPHSTKSV 1 16753227 NP_000961.2 ribosomal protein L6 RPL6 1 HQEGEIFDTEKEK

YYPTEDVPRIDISNVKIPK

SV 1 15431301 NP_000962.2 ribosomal protein L7 RPL7 1 LAFVIRTTHFVEGGDAGNREDQINR

SV 1 4506663 NP_000964.1 ribosomal protein L8 RPL8 1 ASGNYATVISHNPETKPM+SV 1 4506675 NP_002941.1 ribophorin I RPN1 3 NIEIDSPYEISR

VTAEVVLAHLGGGSTSRTVDLSSHLAKGEDEEENNLEVRSAVEAERLVAGK

SV 0.97 14277700 NP_001007.2 ribosomal protein S12 RPS12 1 TALIHDGLARPM+SV 1 5032051 NP_005608.1 ribosomal protein S14 RPS14 2 ELGITALHIK

IGRIEDVTPIPSDSTRIGRIEDVTPIPSDSTRRTPGPGAQSALRIEDVTPIPSDSTRR

SV 1 4506687 NP_001009.1 ribosomal protein S15 RPS15 1 DMIILPEM[147]VGSMVGVYNGKEAPPMEKPEVVKDMIILPEMVGSMVGVYNGKEAPPM[147]EKPEVVK

SV 1 4506691 NP_001011.1 ribosomal protein S16 RPS16 1 VNGRPLEM[147]IEPRVNGRPLEMIEPRGPLQSVQVFGR

SV 0.91 11968182 NP_072045.1 ribosomal protein S18 RPS18 1 RAGELTEDEVERAGELTEDEVERVITIMQNPR

SV 1 4506695 NP_001013.1 ribosomal protein S19 RPS19 1 VPEWVDTVKDLDRIAGQVAAANKDVNQQEFVR

SV 1 4506697 NP_001014.1 ribosomal protein S20 RPS20 1 TPVEPEVAIHRLIDLHSPSEIVK

SV 0.95 4506699 NP_001015.1 ribosomal protein S21 RPS21 1 MGESDDSILRSV 1 33354240 NP_877578.1 ribosomal protein S3a RPS3A 1 APAMFNIR

EVQTNDLKEVVNKSV 1 4506725 NP_000998.1 ribosomal protein S4 RPS4X 1 LSNIFVIGKPM 0.76 133967 P23402 Cyanelle 30S ribosomal protein S5 RPS5 1 VIM[147]RPSAEGTGVIAGGAVRPM 0.82 549712 P36070 RNA polymerase I specific transcription initiation factor RRN3 RRN3 1 QTVCHHDMLK

SV 0.96 38044112 NP_937883.1 restin isoform b RSN 1 AAQTAEDAMQIMEQMTKEKSIEDM[147]TVKAEQSQQEAAK

SV 0.87 46397364 NP_937994.2 arginine/serine-rich coiled-coil 2 isoform a RSRC2 1 M[147]AASDTERDGLAPEKSV 0.79 24308005 NP_055953.1 Paf1/RNA polymerase II complex component RTF1 1 KLTQIQESQVTSHNK

PM+SV 0.98 41393604 NP_958832.1 reticulon 3 isoform C RTN3 2 TQIDHYVGIARSEEGHPFKSVIQAVQK

SV 0.98 24431933 NP_722550.1 reticulon 4 isoform B RTN4 1 GPLPAAPPVAPERSV 0.87 14739645 XP_048462.1 RUN and SH3 domain containing 2 RUSC2 1 AVNIAVDLIVAHFGTSR

LSEGPAAM[147]AGPGSPPRPM 0.76 37704386 NP_001027.2 ryanodine receptor 3 RYR3 1 M[147]VASCCR

VNVPKDHPHIEVMRIDGTM[147]DSPPCLQSPEIPLESLRADMEDGEK

SV 1 5032059 NP_005612.1 S100 calcium-binding protein A12; calgranulin C S100A12 1 NIKDKAVIDEIFSV 1 9845516 NP_062427.1 S100 calcium-binding protein A4 S100A4 1 ALDVMVSTFHK

PM+SV 0.97 21614544 NP_002955.2 S100 calcium-binding protein A8; calgranulin A S100A8 4 ALNSIIDVYHKKELDINTDGAVNFGADVWFKM[147]GVAAHKK

PM+SV 1 4506773 NP_002956.1 S100 calcium-binding protein A9; calgranulin B S100A9 4 NIETIINTFHQYSVKVIEHIMEDLDTNADKQLVIEHIMEDLDTNADKNIETIINTFHQYLGHPDTLNQGEF

SV 0.8 38230498 NP_055178.2 sacsin SACS 1 RINHSSDQGISSYTKVPGNVDAAVQLTAASGTTPVRKSVGNPVEAR

PM 0.77 21361922 NP_071419.2 SAM domain, SH3 domain and nuclear localisation signals, 1 SAMSN1 1 TSNNGGGLGKPM+SV 0.99 19923597 NP_078821.2 mSin3A-associated protein 130 SAP130 3 INELIQGNMQR

INELIQGNM[147]QRAAAP

PM 0.96 18266844 P26638 Seryl-tRNA synthetase SARS 1 VIGKGSEKSDDNSYDEKPM 0.73 51477191 XP_291339.3 spermidine/spermine N1-acetyl transferase-like 1 SATL1 1 QSGTNLPDINQPDMK

PM+SV 1 5730031 NP_005688.2 secretory carrier membrane protein 2 SCAMP2 2 ELQNTVANLHVRSV 0.95 7705767 NP_057086.1 saccharopine dehydrogenase SCCPDH 1 QATVVLNCVGPYRPM 0.95 30089970 NP_000326.2 voltage-gated sodium channel type V alpha isoform b SCN5A 2 EHPPDTTTPSEEPGGPQMLTSQAPCVDGF

LICLNM[147]VTM[147]M[147]VETDDQSPEKTSAQGQPSPGTSAPGHALHGK

SV 0.97 38504671 NP_078859.2 secernin 3 SCRN3 1 GAEM[147]GANEHGVCIGNEAVWGRSV 0.98 51464029 XP_171032.4 Succinate dehydrogenase flavoprotein subunit, mitochondrial precursor SDHAL2 1 SREQHGALGAANAHDTVR

TYLSCTSAHTSTSDGTAM[147]ITRPM+SV 0.99 7657546 NP_055117.1 protein transport protein SEC61 gamma subunit SEC61G 2 M[147]DQVM[147]QFVEPSR

LIHIPINNIIVGGPM 0.95 20140147 Q96T21 SECIS-binding protein 2 SECISBP2 1 IEDAEEFPNLAVASERPM 0.98 4506879 NP_002997.1 selectin P ligand SELPLG 1 SPGLTPEPRPM 0.79 33942064 NP_006369.2 semaphorin 4D SEMA4D 1 ETLVEPGSFSQQNGEHPK

TVFQVVAKPM 0.78 24234741 NP_705871.1 semaphorin 6D isoform 4 precursor SEMA6D 1 KIFGGPTSDMEVSSSSVTTMASIPEITPKSV 1 21361198 NP_000286.2 protease inhibitor 1 (anti-elastase), alpha-1-antitrypsin SERPINA1 3 GTEAAGAM[147]FLEAIPMSIPPEVK

TDTSHHDQDHPTFNKDTEEEDFHVDQVTTVKSASLHLPKSVLGQLGITK

SV 1 13489087 NP_109591.1 protease inhibitor 2 (anti-elastase), monocyte\neutrophil derived SERPINB1 1 TFHFNTVEEVHSRPM 0.79 7662122 NP_056374.1 SET binding protein 1 SETBP1 1 QPTQFDEDSR

DSSMSPGMPSPHLKVDQTAVHSK

SV 0.98 13994282 NP_114121.1 CLLL8 protein SETDB2 1 QLCQNRVVQHGPQVRPM 0.65 5902076 NP_008855.1 splicing factor, arginine\serine-rich 1 SFRS1 1 GGGGGGGGGAPRSV 1 47271443 NP_003007.2 splicing factor, arginine\serine-rich 2 SFRS2 1 DAEDAMDAMDGAVLDGR

VGDVYIPRPM 0.72 13346506 NP_008857.1 surfactant, pulmonary-associated protein A2 SFTPA2 1 DVCVGSPGIPGTPGSHGLPGRPM 1 42476330 NP_003010.3 surfactant, pulmonary-associated protein D SFTPD 2 GVPGNAGAAGSAGAMGPQGSPGARGPPGLK

GVPGNAGAAGSAGAMGPQGSPGARAGPVGPK

PM 0.82 4506921 NP_003012.1 small glutamine-rich tetratricopeptide SGTA 1 M[147]NNPQIQQLM[147]SGM[147]ISGGNNPLGTPGTSPSQNDLPM 0.89 4885525 NP_005481.1 SH2 domain containing 3A SH2D3A 1 EDPAGMEASTMPISALPRTSSDPVLPM 0.95 13994242 NP_114098.1 SH3-domain kinase binding protein 1 SH3KBP1 1 KPPPPSAPVIKQGAGTTER

DYQAQHDDELTISVGEIITNIRPM 0.92 11968152 NP_057232.1 SH3 and multiple ankyrin repeat domains 1 SHANK1 1 TVYQMALNK

EGPAGGTGGSGGPGGSLGSRGRPM 0.99 44680159 NP_976224.2 rai-like protein SHC4 1 HCGKAPETVQPGATAQPASSHSLPHIKSV 0.75 7657572 NP_055257.1 sialic acid binding Ig-like lectin 8 SIGLEC8 1 KSARPAAGVGDTGMEDAKPM 0.73 23943856 NP_055256.1 sialic acid binding Ig-like lectin 9 SIGLEC9 1 PAAGVGDTGIEDANAVRSV 0.78 23397666 NP_056292.1 transcriptional co-repressor Sin3A SIN3A 1 MVYVIKSEDY

LDTEEENSDDPVEAERPM+SV 1 18426911 NP_542970.1 protein tyrosine phosphatase, non-receptor type substrate 1 precursor SIRPA 3 NNM[147]DFSIR

VPPTLEVTQQPVRSGAGTELSVRGSPDDVEFK

SV 0.97 4885599 NP_005405.1 SKI-like SKIL 2 IM[147]EEVM[147]RKM[147]ITDIHVNGKTINK

SV 0.94 39930353 NP_056175.2 superkiller viralicidic activity 2, KIAA0052 SKIV2L2 1 KAQIAIDIKSAKQMCQAAKAIGNTELENK

PM 0.82 27151692 Q9WVL3 Solute carrier family 12 member 7 SLC12A7 1 NEREREAQLIHDRPM 0.93 23396845 Q8WWT9 Solute carrier family 13, member 3 SLC13A3 1 KDPSQESEENTAAVRRPM 0.96 4759112 NP_004198.1 solute carrier family 16, member 3 SLC16A3 1 VVTAQPGSGPPRPSR

DLGVPDTKPM 1 31543628 NP_004163.2 solute carrier family 1, member 3 SLC1A3 1 AVVYYM[147]TTTIIAVVIGIIIVIIIHPGKSV 0.89 4827012 NP_005062.1 solute carrier family 1 (high affinity aspartate\glutamate transporter), member 6 SLC1A6 1 TMTNVLGDSIGAAVIEHLSQRPM 0.67 40316845 NP_005107.4 solute carrier family 23 (nucleobase transporters), member 2 SLC23A2 1 SDNSRSSDEDSQATGSV 1 33598954 NP_037518.2 solute carrier family 25 member 24 isoform 1 SLC25A24 1 QLLAGGIAGAVSRPM 0.86 47132595 NP_998776.1 solute carrier family 25 member 3 isoform b precursor SLC25A3 3 IQTQPGYANTLR

TVEALYKPM 0.85 38524616 NP_940982.1 solute carrier family 27 (fatty acid transporter), member 1 SLC27A1 1 GENVSTTEVEGVLSR

PM+SV 0.74 5902090 NP_008862.1 solute carrier family 2 (facilitated glucose transporter), member 3 SLC2A3 1 AFEGQAHGADRGRTFEDITRSGKDGVMEMNSIEPAKETTTNV

SV 0.94 17999520 NP_542119.1 vesicular GABA transporter SLC32A1 2 IACLYEENEDGEVVRPM 1 21361344 NP_002385.2 solute carrier family 3, member 2 SLC3A2 1 VAEDEAEAAAAAKPM 0.93 4507021 NP_000333.1 solute carrier family 4, anion exchanger, member 1 SLC4A1 2 IPPDSEATLVLVGR

ASTPGAAAQIQEVKNSSYFPGK

PM 0.9 8394291 NP_059131.1 solute carrier organic anion transporter family, member 1C1 SLCO1C1 1 EDSNSSSEKSGNSSGIVGRCQKDNGCPQM[147]F

PM 1 45267821 NP_659427.2 schlafen-like 1 SLFNL1 1 QSCQGRPSGVCSDSAIVHQQIVGKDQLPM+SV 0.8 11321571 NP_003053.1 slit homolog 3 SLIT3 2 ILVTSFNHMPK

PM 0.67 5174513 NP_005893.1 SMAD 3 SMAD3 1 SHSIPENTNFPAGIEPQSNIPETPPPGYLPM 0.7 6806898 NP_009292.1 alpha-synuclein isoform NACP112 SNCA 1 EGVVAAAEKPM 0.91 4885603 NP_005451.1 synuclein alpha interacting protein SNCAIP 1 ACSTGSSESSSSNMAPFCVLSPVKPM 0.99 27597094 NP_775490.1 SNF1-like kinase SNF1LK 1 M[147]VIM[147]SEFSADPAGQGQGQQK

PM+SV 0.65 4507125 NP_003082.1 small nuclear ribonucleoprotein polypeptide B\B' isoform B SNRPB 2 GIPAGVPMPQAPAGLAGPVRPM 0.97 42659639 XP_374949.1 Sorting nexin 19 SNX19 1 CLQEGNVESETLSM[147]SAM[147]ESF

SYSEPEGSAGPSPEVEEGHEAVEGDL

PM+SV 1 10835187 NP_000627.1 superoxide dismutase 2, mitochondrial SOD2 4 AIWNVINWENVTERYQEALAKGDVTAQIALQPALK

SV 1 6912678 NP_036575.1 sperm associated antigen 6 isoform 1 SPAG6 1 SDIAKHSPELAQTVVDAGAVAHLPM 0.97 23308553 NP_694568.1 spermatogenesis associated 13 SPATA13 1 HITMPTSVPQQQVFGLAEPK

AGDVIQVLEASNKSV 0.65 21703346 NP_055902.1 spartin SPG20 2 ENQEGAANVNVRGEKDEQTK

VSQFLVDGVCTVANCVGKPM 0.99 4507181 NP_003114.1 sialophorin (CD43) SPN 2 TGALVLSRPM 1 32401445 NP_861449.1 sprouty-related protein with EVH-1 domain 2 SPRED2 1 KAIEDLIEGSTTSSSTIHNEAELPM 0.99 2493433 Q13813 Spectrin alpha chain SPTAN1 1 IEDLGAAMEEALILDNK

LIQEQHPEEELIKAQLADSFHLQQFFRHQAFEAELHANADR

SV 1 27413156 NP_000338.2 spectrin, beta, SPTB 1 AEMEMPDTLEDLEVVQHRAQGLLSAGHPEGEQIIRNQTLQNEILGHTPR

SV 1 4507195 NP_003119.1 spectrin, beta, non-erythrocytic 1 isoform 1 SPTBN1 1 VAVVNQIARQLM[147]HSGHPSEKAQTLPTSVVTITSESSPGKRLVSDGNINSDRIQEKDVSSVELLMNNHQGIKM[147]HSGHPSEKEIK

PM 0.85 40353204 NP_066022.1 spectrin, beta, non-erythrocytic 4 SPTBN4 1 VEALNAAALREAALQALEPRILQGELGGREGGEGGGSR

PM+SV 1 10864011 NP_067022.1 sulfide dehydrogenase like SQRDL 4 GLPEGFAHPKKVGAENVAIVEPSERTAAAVAAQSGILDRGLPEGFAHPKVGAENVAIVEPSERYADALQEIIQEREGNAIFTFPNTPVKADALQEIIQERPTASVIPSGVEWIK

PM 0.76 27477113 NP_004590.2 sterol regulatory element-binding transcription factor 2 SREBF2 1 GSSSGAVDPSVQRSCNDCQQMIVK

PM 1 5454090 NP_006271.1 signal sequence receptor, delta SSR4 1 VQNMALYADVGGKVQNM[147]ALYADVGGKNNEDISIIPPLFTVSVDHR

PM 0.9 7662168 NP_055497.1 suppression of tumorigenicity 18 ST18 1 LQTQITSM[147]ESNLKFPGEASIPSPKPK

PM 0.76 5032063 NP_005853.1 stromal antigen 1 STAG1 1 GLM[147]EEDAEPIFEDVM[147]M[147]SSRSV 0.99 21618340 NP_644805.1 signal transducer and activator of transcription 3 isoform 1 STAT3 1 SQGDMQDLNGNNQSVTRQKPM 0.8 41349446 NP_065911.2 stromal interaction molecule 2 STIM2 1 QNAEMQLAIAK

QNAEM[147]QLAIAKPM+SV 1 38016911 NP_004090.4 stomatin isoform a STOM 4 AKVIAAEGEMNASR

TISFDIPPQEILTKEASMVITESPAALQLRVQNATLAVANITNADSATRDDATDAWGIKVER

PM 1 22749415 NP_689926.1 integral membrane protein 1 STT3A 1 NNIPIIASVSEHQPTTWPM 0.94 5902128 NP_008880.1 syntaxin binding protein 2; Hunc18b STXBP2 1 NGVSEENLAKSV 0.99 19923784 NP_006704.2 activated RNA polymerase II transcription cofactor 4 SUB1 1 SQLKEQISDIDDAVR

KEQISDIDDAVRPM 0.81 29789000 NP_003839.1 succinate-CoA ligase, GDP-forming, beta subunit SUCLG2 1 SQAADQITKPM 0.94 24233580 NP_710161.1 synaptonemal complex protein 3 SYCP3 1 SSAGVVEDMGGEVQNMLEGVGVDINK

SV 0.99 23097308 NP_149062.1 nesprin 1 SYNE1 2 LLGECSSSIDSVKEIDSELEAMTEKM[147]VQSIDFQTEM[147]SRDLESAM[147]SRQQGSYILTVEAGKSQSLPDHHEELHAEQMRLMPQEGSEKIIKISADDISILNER

PM 1 4759202 NP_004701.1 synaptogyrin 2 SYNGR2 1 FLTQPQVVARDVLVGADSVR

SV 0.87 40068038 NP_057608.2 synaptotagmin XVII SYT17 1 LNVDVIRPM 0.81 18562480 XP_087804.1 synaptotagmin-like 3 SYTL3 1 FPTGGKPM 0.72 4507369 NP_000344.1 tyrosine aminotransferase TAT 1 MDPYMIQM[147]SSKPM 1 549052 P36220 Tubulin alpha-6 chain TBA 1 NLDIERPTYTNLNR

AVFVDLEPTVIDEVRLISQIVSSITASLR

SV 0.8 21362084 NP_073608.2 TBC1 domain family, member 15 TBC1D15 1 INQQEEPGFEVITRPM 0.74 45439357 NP_057511.2 elongin A2 TCEB3B 1 EGGQAGSGQR

RPQHSHSNKPM 0.97 31652244 NP_005641.1 transcription factor 20 isoform 1 TCF20 2 RATEMQSK

GSQEDDPAATQRPPSNGGAKQLMPQLSPTPSMMPSPNSHAAGF

SV 0.65 4507411 NP_000347.1 treacle TCOF1 1 APSAKGTISAPGKVVTAAAQAKGM[147]GTVEGGDQSNPKQEAKPQQAAGMLSPK

SV 1 13540473 NP_110379.1 t-complex 1 TCP1 1 DNKQAGVFEPTIVKPM 0.99 6166139 O42671 ELONGATION FACTOR 1-ALPHA TEF1 1 GKTLLEAISASRPHTRPM 0.94 38201702 NP_937986.1 telomerase reverse transcriptase isoform 2 TERT 1 RVISDTASLCYSV 0.95 20127666 NP_113639.3 testis-specific protein TES101RP TEX101 1 GALCQETILIIK

MGARQIQTSSSQTSPEEAM[147]GTPRPM 0.81 13775178 NP_112563.1 testis expressed sequence 13B TEX13B 1 EAVAAAGAAGGKGEERY

PM+SV 0.74 4557871 NP_001054.1 transferrin TF 2 DGAGDVAFVKAPNHAVVTR

SV 0.84 8659574 NP_006512.2 transcription factor binding to IGHM enhancer 3 TFE3 1 TPAMSSSSSSRPM+SV 0.83 8923812 NP_060943.1 thioesterase superfamily member 2 THEM2 2 LGEDIVITAHVLK

PM 0.89 14150171 NP_115737.1 THO complex 3 THOC3 1 M[147]AVPAAAM[147]GPSALGQSGPGSMAPWSV 1 8923485 NP_060328.1 timeless-interacting protein; tipin TIPIN 1 EVQTCLKPM 1 4507715 NP_003308.1 thyroid transcription factor 1 TITF1 1 PAISRFM[147]GPASGMNMSGMGGL

PM+SV 0.79 4507521 NP_001055.1 transketolase TKT 2 MPSLPSYKNMAEQIIQEIYSQIQSKMFGIDRDAIAQAVRISSDLDGHPVPKNM[147]AEQIIQEIYSQIQSKM[147]FGIDRDAIAQAVR

PM 0.66 4827030 NP_005069.1 transducin-like enhancer protein 3 TLE3 1 AGLHNIPPQM[147]SAAAAAAAAAYGRPM+SV 0.67 16753233 NP_006280.2 talin 1 TLN1 2 WAASPK

ACKEAAYHPEVAPDVRALEATTEHIREAAYHPEVAPDVRIGITNHDEYSLVRDPPSWSVLAGHSRVVAPTISSPVCQEQLVEAGREMDSALSVVQNLEK

PM 0.99 20140689 Q95M53 Toll-like receptor 2 TLR2 1 LM[147]TLPDASLLPM[147]LLVLKPM 0.69 20302166 NP_057694.2 toll-like receptor 8 TLR8 2 QNDSVIAECSNR

QNDSVIAECSNRPM 0.65 4507547 NP_003264.1 transmembrane 7 superfamily member 2 TM7SF2 1 APAGSTRVPARAGGAVEPTGAAAVAR

SV 0.65 23943900 NP_689681.2 EVIN2 TMC8 2 FQLM[147]QQQTRPM 1 40255041 NP_006818.2 transmembrane trafficking protein TMED10 1 NYEEIAK

ITDSAGHILYSKDTNESTNTRMSGLSGPPAR

PM 0.87 13129092 NP_076997.1 transmembrane protein 109 TMEM109 1 EAPVDVLTQIGRPM 0.96 13386492 NP_085054.1 hypothetical protein MGC10993 TMEM177 1 GDLVINTNHPVVIHGHTVDWRSV 1 42716277 NP_055622.3 transmembrane protein 24 TMEM24 1 DAIVSTQPAMMVNLRSV 0.99 51470820 XP_495866.1 transmembrane protein 41B TMEM41B 1 EGGLLAPRSV 1 7657649 NP_055362.1 tropomodulin 3 (ubiquitous) TMOD3 1 QKPVQTFTEEK

ENDAHLVEVNLNNIKPM 0.66 28973799 NP_803190.1 transmembrane and ubiquitin-like domain containing 2 isoform a TMUB2 1 GDSTGEAGAGGGVEPSLPM 0.85 26051240 NP_006282.2 tumor necrosis factor, alpha-induced protein 2 TNFAIP2 1 AVVAEQEREDRQAAAAGPGTSGLPM 0.89 4507577 NP_001057.1 tumor necrosis factor receptor 2 TNFRSF1B 1 SQHTQPTPEPSTAPSTSFLLPM 0.99 20270212 NP_203754.1 tankyrase 1-binding protein of 182 kDa TNKS1BP1 1 NM[147]APGAVCSPGESK

EMEEELVPTGSEPGDTRPM 0.65 42476299 NP_056390.2 trinucleotide repeat containing 15 TNRC15 1 DVGRPNFEEGGPTSVGRPM 0.77 33413425 NP_061869.2 trinucleotide repeat containing 6C TNRC6C 1 SGSGWNDTTR

GDSISSTAVSTAAAAKSGHAWSGAANQEDKSV 0.81 20544189 NP_061978.4 tenascin XB isoform 1 TNXB 1 GEESEVTVGGLEPGR

VGPVSAVGLTASTEPPTPEPPIKTLSPVLESPR

PM 0.96 6094496 O24308 DNA topoisomerase II (PsTopII) TOP2 1 GLLINFIHSFWPSLLKPM 0.81 40805104 NP_005793.2 topoisomerase I binding protein TOPORS 1 MDNFSPKAGTSK

ECDIATLSNNLNNANKSV 0.94 21450775 NP_659471.1 torsin A interacting protein 2 TOR1AIP2 1 FTNSDTPTSFNHM[147]DSDKPM 0.79 51471745 XP_375045.2 epidermal Langerhans cell protein LCP1 TOX4 1 SANPPVTIDVPM[147]TDM[147]TSGLM[147]GHSQL

PM+SV 0.7 5032189 NP_005648.1 tumor protein p53 binding protein, 1 TP53BP1 2 KDGDM[147]HSSSLTVECSKECSEAMEVETSVISIDSPQKENPVLDVVSNPEQTAGEERQSQQPM[147]KPISPVKSNVSSPATPTASSSSSTTPTRKDVVSNPEQTAGEER

SV 0.99 28558984 NP_783650.1 thyroid peroxidase isoform b TPO 1 STLPISETGGGTPELRPM 0.93 4507659 NP_003283.1 translocated promoter region (to activated MET oncogene) TPR 1 IVKPGM[147]K

IAHLAGVKSETETKGIASTSDPPTANIKPTPVVSTPSK

PM 0.65 34878836 NP_908973.1 ring finger protein 29 isoform 1 TRIM55 1 GGTTM[147]ASGGRETSAPAATSQIGFEAPPLQGQAAAPASGSGADSEPAR

PM 0.69 10863905 NP_004230.1 thyroid hormone receptor interactor 11 TRIP11 1 QDLNDEKKGGLGSGLGQSL

SV 0.65 42656588 XP_376178.1 thyroid hormone receptor interactor 12 TRIP12 1 GRLSTQSNSNNIEPARPM 0.88 1174798 P19334 Transient receptor potential protein TRP 1 KSITSGGTGGGASM[147]LAAAALR

QTLERLKLAIRPM 0.89 133329 P17545 DNA-directed RNA polymerase II largest subunit TRP5.9 1 NVEKIGAAANNRTLNR

VDESYIIETGMANNVRPM+SV 0.86 4507691 NP_003487.1 transformation\transcription domain-associated protein TRRAP 3 EVQSNMVPR

HYTMVAVAQQCGPFLEVQSNM[147]VPRSMLKEVQSNMVPRSM[147]LKVACQVNDNTNTAGSPGEVLSRLVEM[147]ASSLAIR

PM 0.92 34556207 NP_904358.1 transforming growth factor beta 1 induced transcript 4 isoform 1 TSC22D1 2 MHQPPESTAAAAAAADISAREKENAVPATEGVLINK

SV 0.99 4502481 NP_000705.1 peripheral benzodiazapine receptor TSPO 1 FVHGEGLRPM 0.76 41196192 XP_371844.1 TSPY-like 1 TSPYL1 1 TAGAEAEAEEVK

PM 0.74 4507709 NP_003304.1 tissue specific transplantation antigen P35B TSTA3 1 EAAEAVVEAM[147]DFHGEVTFDTTKPM 1 21450645 NP_659402.1 tetratricopeptide repeat domain 16 TTC16 1 M[147]VAQAQQARQDAGILAVQGKSV 0.9 21359841 NP_003307.2 tetratricopeptide repeat domain 3 TTC3 1 SSQGSPSVVVAPSPK

PM+SV 1 20143914 NP_003310.2 titin isoform N2-B TTN 3 AEASTSY MPDDDGGMVCSSVAILEGMGVTFHCKDEVILQCEISKVYAENIAGIGKFGPGPPCVSKPLDGGAEITNYVIELRAENKIGTGPPTESKPVIAKGVSEPRETVTAVTVQDLRVGASDPSDSSDPQIAKERHIFNVKKTEPKETSRPNWAQVSATVPITSCSVEKYILTIENGVGEPKVFAENEYGIGDPGETREM[147]KEVTLDDISQIKIEQEIEM[147]EM[147]KVTGYLIEMQKMPDDDGGDRMVCSSVARTTFKILEGMGVTFHCK

SV 0.69 4507725 NP_000362.1 transthyretin TTR 2 GSPAINVAVHVFRSV 1 17921989 NP_005991.1 tubulin, alpha 1 TUBA1 1 VGINYQPPTVVPGGDLAK

LISQIVSSITASLRDVNAAIAAIK

SV 0.97 17986283 NP_006000.2 tubulin, alpha 3 TUBA3 1 AVFVDLEPTVIDEVRSV 0.9 13376539 NP_079295.1 tubulin, alpha 4 TUBA4 1 QIFHPEQLITGKSV 1 9507215 NP_061816.1 tubulin, alpha 8 TUBA8 2 VGINYQPPTVVPGGDLAK

LISQIVSSITASLRSV 1 29788785 NP_821133.1 beta 5-tubulin TUBB 1 IM[147]NTFSVVPSPK

LAVNM[147]VPFPRISEQFTAM[147]FRISVYYNEATGGKAILVDLEPGTM[147]DSVRLAVNMVPFPR

SV 0.95 4507729 NP_001060.1 tubulin, beta, 2A TUBB2A 1 ISEQFTAMFRMSMKEVDEQMLNVQNK

SV 0.77 5453660 NP_006313.1 tubulin, gamma complex associated protein 3 TUBGCP3 1 TLAALVDHCQGRPM 0.71 15982588 NP_065194.1 tubulin, gamma complex associated protein 6 TUBGCP6 1 FRSQLISQAWGPPGGPRPM 0.67 38372182 Q814C4 Elongation factor Tu (EF-Tu) TUF 1 TVGYGVVATIVESV 0.79 34147630 NP_003312.3 Tu translation elongation factor, mitochondrial TUFM 1 TTLTAAITKSV 0.98 6715610 NP_003313.2 tubby like protein 1 TULP1 1 KEEEEEEEAATVIKPM 0.95 7705696 NP_056997.1 endoplasmic reticulum thioredoxin superfamily member, 18 kDa TXNDC12 1 EAAASGLPLMVIIHKPM 0.71 40254947 NP_066979.2 thioredoxin domain containing 13 TXNDC13 1 IAAVAATAGPEEAALPPEQSRVQPM[147]TASNWPM 0.92 51467582 XP_376898.2 thioredoxin domain containing 4 TXNDC4 1 DLAEITTLDRPM 1 4507755 NP_003323.1 TYRO protein tyrosine kinase binding protein isoform 1 TYROBP 1 ITETESPYQELQGQRSV 0.68 24308155 NP_060473.1 uveal autoantigen with coiled-coil domains and ankyrin repeats UACA 1 TPLVLATQMSRSV 0.8 40254861 NP_055662.2 NICE-4 protein UBAP2L 1 QHGVNVSVNASATPFQQPSGYGSHGY

SSVATTSGKPM+SV 1 11024714 NP_061828.1 ubiquitin B UBB 2 TITLEVEPSDTIENVK

MQIFVKTITLEVEPSDTIENVKAKAKIQDKEGIPPDQQRLIFAGK

PM 1 23510338 NP_003325.2 ubiquitin-activating enzyme E1 UBE1 1 NFAMIGLGCGEGGEIIVTDM[147]DTIEKPM 0.83 40255039 NP_060697.3 ubiquitin-activating enzyme E1-like 2 UBE1L2 1 NAIFQLEK

PM 0.65 21363047 O94941 Ubiquitin conjugating enzyme 7 interacting protein 5 UBOX5 1 ISADGYEVENLISEDLTKPM 0.75 1174863 P43593 Ubiquitin carboxyl-terminal hydrolase 6 UBP6 1 FDPSSSENVM[147]TPRPM 0.93 8567418 NP_059509.1 ubiquilin 3 UBQLN3 1 QIEQGLQVLATEAPRSV 0.93 13027638 NP_006750.2 UDP-glucose pyrophosphorylase 2 UGP2 1 IQRPPEDSIQPYEKPM 0.72 27477061 NP_775259.1 cardiomyopathy associated 4 UNC45B 1 QAATECM[147]CNM[147]VLHKSV 1 31742498 NP_056189.1 unc-84 homolog B UNC84B 1 IRPTAVTLEHVPK

EGVIGVTEEQVHHIVKPM 0.84 1174865 P43265 Ubiquinol-cytochrome C reductase complex core protein 2, mitochondrial precursor UQCR2 1 VITLDNGGSVAQLTFLYKSV 0.94 5174743 NP_005994.1 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 UQCRFS1 1 SGPFAPVLSATSRPM 1 46249406 NP_996816.1 usherin isoform B USH2A 1 QACTSGGCSTSKPTSITTLEAAPSEVSPPDLSV 0.94 6912742 NP_036607.1 ubiquitin-specific protease 21 USP21 1 APPILANGPVPSPPRPM 0.69 51475763 XP_374396.2 ubiquitin specific protease 42 USP42 1 CMMCTMQAHITQALSNPGDVIKPM[147]FPM 0.67 6005938 NP_009055.1 utrophin; dystrophin-related protein UTRN 1 QLLEQPESDSR

AETPSTVTEVDM[147]DLDSYSV 1 4759300 NP_004772.1 vesicle-associated membrane protein 3 VAMP3 1 RLQQTQNQVDEVVDIMRSV 0.97 14043026 NP_003752.2 vesicle-associated membrane protein 8 VAMP8 1 NLQSEVEGVKNIMTQNVERSV 0.97 7110735 NP_036608.1 ventral anterior homeobox 2 VAX2 1 ADGGGHSPTEVAGTSASSPAGSRPM 0.7 4507875 NP_001069.1 vascular cell adhesion molecule 1 (CD106) VCAM1 1 LHIDEMDSVPTVRQAVK

PM+SV 0.73 4507877 NP_003364.1 vinculin isoform VCL VCL 4 ILSTVKAIPDLTAPVAAVQAAVSNLVRENHSGKLGATAEKVGELCAGKEAEAASIKCKVAM[147]ANIQPQM[147]LVAGATSIARLANVMMGPYRWIDNPTVDDRGVGQAAIR

SV 1 6005942 NP_009057.1 valosin-containing protein VCP 1 QTNPSAMEVEEDDPVPEIRVINQILTEMDGMSTKK

PM 0.75 6005968 NP_009077.1 zinc finger protein 161 VEZF1 1 STVTTSSSGTNPSSSASTTAM[147]PVTQSVKKPSKPM+SV 1 4507895 NP_003371.1 vimentin VIM 2 TVETRDGQVINETSQHHDDLE

DGQVINETSQHHDDLEFADLSEAANRDVRQQYESVAAKADAINTEFKNTR

SV 0.78 35493713 NP_060360.3 vacuolar protein sorting 13B isoform 5 VPS13B 1 HM[147]QQQPVVAVPLVM[147]PVCRHM[147]QQQPVVAVPLVMPVCR

SV 1 42734333 NP_056193.1 vacuolar protein sorting 13D VPS13D 1 YIDTCM[147]VIFAPRYAAPDKNSSSSTIGSPSSR

PM 0.7 38348278 NP_940883.1 V-set and transmembrane domain containing 1 VSTM1 1 SEAASDTTQEPPGSHEYAALKPM+SV 0.69 31377846 NP_060808.2 WD repeat domain 52 WD40 2 QGGTALVWVPR

QGGTALVWVPRPM 0.88 5901892 NP_009017.1 WD repeat and HMG-box DNA binding protein 1 WDHD1 1 TEEVK

LPYCQIATEKSV 0.82 31317286 NP_851938.1 WD repeat domain 21 isoform 3 WDR21A 1 SGEIFAIDLRSV 0.65 9954875 NP_005443.2 WD repeat domain 46 WDR46 1 LM[147]CEINVM[147]EAVRDIR

QSLQQQHHKEAKSV 0.66 33300657 NP_877435.1 WD repeat domain 72 WDR72 1 TATLPNQVGIPR

HDSNSNSANFQDVEDMPDRPM 1 16445434 NP_060288.2 WD repeat domain 8 protein WDR8 1 QLGGHTSV 0.97 38093663 NP_938026.1 WD repeat domain 86 WDR86 1 EESPSQASGFSLVARPM 1 28212222 NP_783165.1 WAP, FS, Ig, two KU and NTR module related protein WFIKKN2 1 IIM[147]GEVDGGM[147]AM[147]LSV 0.83 14916475 NP_149122.1 wingless-type MMTV integration site family, member 3A WNT3A 1 DKYDSASEM[147]VVEKSV 0.79 16507239 NP_006513.1 wingless-type MMTV integration site family, member 6 WNT6 1 QESVQLEENCLCRPM 0.91 17505193 NP_478679.1 wingless-type MMTV integration site family, member 7B WNT7B 1 LCNRTSPGADGCDTMCCGRPM 0.76 15082261 NP_003386.1 wingless-type MMTV integration site family, member 9A WNT9A 1 DGSPLAR

ASGAGGSDPLPRM[147]LDGSPLAR

PM 0.76 5739524 NP_000544.1 Werner Syndrome helicase WRN 1 QKHANKMDVPPAILATNKSV 0.79 40255055 NP_079225.3 WW, C2 and coiled-coil domain containing 2 WWC2 1 ETNTDEAANDNMAVRPKERPM 0.94 9966899 NP_065144.1 G antigen, family D, 2 isoform 1a; XAGE-1 protein XAGE1 2 RSCEPATR

M[147]PEAGEEQPQVRSCEPATR

PM 0.9 27734750 NP_775954.1 XK-related protein 6 isoform b XKR6 1 WGIPLPPDVEPMAPEIPGYPM 0.75 24308364 NP_291035.1 homolog of yeast Golgi membrane protein Yif1p (Yip1p-interacting factor) YIF1B 1 ILADAAAEGVPVRPM 0.9 2499181 Q28983 Zonadhesin precursor ZAN 1 GVPSPKKPEASNR

YDGDHLVEVTVPSSYAGRPM 0.75 42662523 XP_376023.1 zinc finger, BED domain containing 4 ZBED4 1 QQADGLSPR

RAINEMSVECNFRPM 0.89 31982941 NP_055885.2 zinc finger CCCH-type containing 13 ZC3H13 1 DKPRSTSPAGQHHSPISSR

GNIETTSEDGQVFSPKPM 0.74 38348432 NP_940983.1 zinc finger CCCH type domain containing 6 ZC3H6 1 PSPNVGVTLEGPADPQADVPRVLPM 0.69 21361545 NP_057562.2 nuclear interacting partner of anaplastic lymphoma kinase (ALK) ZC3HC1 1 QSSQPAETDSM[147]SLSEK

SQDATFSPGSEQAEKSPGPIVSRSV 0.68 47933346 NP_061901.2 zinc finger, DHHC domain containing 13 isoform 1 ZDHHC13 1 GQSVNMTDVNGQTPLMLSAHKPM 0.94 7662184 NP_055610.1 Smad-interacting protein 1 ZFHX1B 1 QDGDEEFEEEEEESENK

PM+SV 1 37545894 XP_033370.8 zinc finger homeobox 2 ZFHX2 2 HEDGSLSPTGSEAGGGGEGEPPRNACEGGSMPTGGGTGGASGCRNACEGGSM[147]PTGGGTGGASGCR

PM 1 15812180 NP_004917.2 zinc finger protein, C3H type, 36-like 1 ZFP36L1 1 CQFAHGIHELRSLTRSV 0.91 11641241 NP_071735.1 FYVE-finger-containing Rab5 effector protein rabenosyn-5 ZFYVE20 1 DQQQTEKAIELSRPM 0.66 466154 P34656 Hypothetical protein ZK632.11 in chromosome III ZK632.11 1 IVWYPGFNGEQSSLNDRSV 0.79 37594442 NP_003431.2 zinc finger protein 140 (clone pHZ-39) ZNF140 1 EPWLGKPM 1 51460949 XP_376172.2 zinc finger protein 142 (clone pHZ-49) ZNF142 1 LALDEHRRQQHFSHRPM 0.73 38788288 NP_150630.2 zinc finger protein 160 ZNF160 1 SSLTTHM[147]AIHTGEKPM 1 24307935 NP_009080.1 zinc finger protein 184 (Kruppel-like) ZNF184 1 IRSSSLAK

SVNVSSNLVTQEPSPEETSTKSV 0.82 5730124 NP_006517.1 zinc finger protein 217 ZNF217 1 TAFGTSSAQTDSPQGGM[147]PSSR

QTDVAAEVKNDGKPM 0.92 32308169 NP_861421.1 zinc finger protein 233 ZNF233 1 SSNQNSCLPSHELTHPGEKSV 0.7 16507198 NP_065894.1 zinc finger protein 291 ZNF291 1 KDAEGWETVQR

YIIDIVVESTAPAEALKSV 0.72 40807465 NP_116208.3 zinc finger protein 341 ZNF341 1 QGFKPK

NSVTVQVMALNPSRPM 1 38788219 NP_872304.2 zinc finger protein 428 ZNF428 1 AGEGRPAGR

GEAPPGTPPCRLCCPATAPQEAPAPEGRSV 0.76 14249386 NP_116141.1 zinc finger protein 496 ZNF496 1 REQAASEDADKGPKPM 0.89 51474550 XP_377498.2 zinc finger protein 508 ZNF508 1 TNDTVSIEK

VLPPGQTAPLRSV 0.78 42661562 XP_375593.1 PREDICTED: zinc finger protein 536 ZNF536 1 SPSDPEVPVPMGGMSQEAHANLY

KDNTIGVTVNCKDQARSV 0.81 51474979 XP_375569.2 zinc finger protein 700 ZNF700 1 EFTLGRPM 0.81 34740327 NP_919226.1 zinc finger protein 804A ZNF804A 1 NTILLNGQSNATM[147]IHSGKSV 0.91 28626521 NP_066363.1 zinc finger, NFX1-type containing 1, KIAA1404 protein ZNFX1 1 VIEEEEVVRPQRPM 0.68 14249488 NP_116194.1 zinc finger protein 206 ZSCAN10 1 HLATHAEPGQEQAEPPQECVECGKPM 0.76 24416002 NP_065816.1 retinoblastoma-associated factor 600 ZUBR1 1 TEIITFTAMMK

QPSLQPSSVISIM[147]KPVRSV 1 4508047 NP_003452.1 zyxin ZYX 1 VNPFRPGDSEPPPAPGAQRPM 0.68 38202226 NP_055928.2 zinc finger, ZZ-type with EF hand domain 1 ZZEF1 1 NSSGANLQGELSHIIR