Utilising Citizen Science to monitor Corymbiacalophylla ... · Utilising Citizen Science to monitor...

28
Utilising Citizen Science to monitor Corymbia calophylla (Marri) Canker incidence and severity Alex R. Chapman A , T. Paap B , C. Marbus B , T.I. Burgess B and G.E.StJ. Hardy B A Gaia Resources, PO Box 428, Leederville, 6903, Western Australia B Centre of Excellence for Climate Change Woodland and Forest Health, School of Veterinary and Life Sciences, Murdoch University, Murdoch, 6150, Western Australia

Transcript of Utilising Citizen Science to monitor Corymbiacalophylla ... · Utilising Citizen Science to monitor...

Utilising Citizen Science to monitorCorymbia calophylla (Marri) Canker

incidence and severity

Alex R. ChapmanA, T. PaapB, C. MarbusB, T.I. BurgessB and G.E.StJ. HardyB

A Gaia Resources, PO Box 428, Leederville, 6903, Western AustraliaB Centre of Excellence for Climate Change Woodland and Forest Health, School of

Veterinary and Life Sciences, Murdoch University, Murdoch, 6150, Western Australia

Introduction

• Corymbia calophylla is a keystonetree species in SW Western Australia

• plays a major role as a:• food source and habitat tree• refugia for vertebrates and invertebrates

incl. the endangered Carnaby’s cockatoo• key species for apiary & honey production

• suffering a major decline syndrome:• foliar pathogen Quambalaria pitereka &• canker fungal pathogen Q. coyrecup

Quambalaria coyrecup

Qu

Impetus for the Marri Canker Project

• came from members of the community who were observingdecline in their local Marri populations

• pathologists at Murdoch University were already researchingthe disease seeking answers and potential treatments

• a grass-roots driven project, considered one of the mainreasons funding was subsequently obtained to start thecollaboration

• community members provided an existing ‘network ofenthusiasm’ able to be engaged to collect the large-scaleresearch data required for scientific analysis

Community engagement workshop

Want to know more about the science?

APPS 2015 – Tuesday 15:35-15:55

• Corymbia calophylla (marri) canker diseaseincidence at the temporal and landscape level

Trudy PaapCentre of Excellence for Climate Change Woodland and Forest Health,School of Veterinary and Life Sciences, Murdoch University,Murdoch, 6150, Western Australia

Forest Pathol

The Marri Ap

Review

Welco

STATE NRM OFFI

EMRCCentre of Excellence forClimate Chango, Woodland & Forest H

MurdocW UNIVERSITY

THE UNIVERSITYW T RN AU TRAL

ogy

p

I Field Guide I About I Help I

me to the Biological Data Recording System

CE

ealth

h

OFIA

This is an implementation of the Biological DataRecording System. software developed by theAtlas of living Australia. You can find our moreabout this software by visiting the Atlas of LivingAustralia web site, or the Google Coderepository.

This text is the default text on the home page. Inorder to change it, your Administrator can log intothe system and change it by going to the Admin>Edit Content menu.

Latest Statistics

Number of users 151Total number of records 443

Number of species recorded O

GET IT ON

,. Google play

Sign OutForest Pathology Logged in as admin

The Marri App

New SiteClick on the map to set the location of the sighting You can drag the new y created location around the map to change the coordinates

Show Map

Location Name

Date 13 Sep 2015

Latitude

Longitude

Accuracy (meters)

Land Use Type TSoil Type T

Size of land TNumber of marri trees T

Years since last fire

Site history

Site history notes

Site Photo!L..-C_ho_o_s_Ne__ofi__fi_e_._J11_e_c_ho_s_e_n.l C ear

Submit and Add Another Will

. l .

I

lll

l

l l

Sign OutForest Pathology Logged in as admin

The Marri App

New TreeClick on the map to set the location of the sighting You can drag the new y created location around the map to change the coord nates

Show Map

Date 13 Sep 2015

Latitude

Longitude

Accuracy (meters)

Time ..___17:19 __,

Tree Species

Diameter at breast height (cm)

Photo of tree r-------..----------,Choose file No file chosen Clear

Cankers

~C_ho_o_s_e_fi_ e~_N_o_fi_e_c_h_~!oClear_se_n

Photo of canker

Number of Trunk Cankers

Number of Branch Cankers

Number of Twig Cankers

Leaf /Flower Blight

. l i .

I

I

I I I

l ! l

Sign OutForest Pathology Logged in as admin

The Marri App

Bulk Data

While you can upload datum one by one through the individual recording forms you can also contribute a bu k amount of data through this Bulk Up oad pageThere are some restr ctions to th s

• You have to down oad a template in e ther ESR Shapefile or Mcrosoft Excel format• You then fill out the details in that template and• You then upload the data through the Up oad method at the bottom of the form

Please note all co-ordinates must be in the Geographic (WGS84) Latitude - Longtude project on and if you are usng Excel you must have decima degrees Ifyou change the format of the template before load ng t it will not pass the upload method

Step 1 : Select File Format

Spreadsheet @

Shapefile O

• Download the template• fill it out, and• then up oad it.

Step 2: DownloadTemplate Spreadsheet

CollapseDown oad your template below for your project. There is help a st of locations and a taxonomy checklist included in the downloaded temp ate

Project: -- Seect a Project -- •

Down oad Checklist: CSV Zip

Download Template

Step 3: Upload Spreadsheet

i i :, l l .

l i I i,

l .

: i i , i l .i i , .

,

l

l , li l .

1 l Il I

"-1•----

Sign OutForest Pathology Logged in as admin

The Marri App

Advanced Review

Refine results for 443 records returned

.... survey Select All ~ag~ M;-i L~ Download

New Site (43) Results per p~20 ·New Tree (400) Scientific Common

Type Date •.... Location User.... Within Area U Select All Name Name

19 Aug 31.451219,·Year Select All Observation NIA NIA Peter Foss 0

2015 115 956323

2000 (1) 15 Jul -33.9455682013 (176) Observation NIA N A Gail Stubber

2015 115 7578132014 (194)2015 (72) 14 Apr -31.802935

Observation NIA NIA Nicky Mar ow 02015 116 172085

.... Month Select All14 Apr -31. 799975January (52) Observation NIA N A Nicky Mar ow2015 116 170409February (90)

March (77) 14 Apr -31.79989 0Apri (6) Observation2015

NIA N A116 170436

Nicky Mar ow

May (24)June (36) 25 Mar -31.938219

Observation NIA N A Aaron LowJuly (4) 2015 115 842722

August (29)September (85) Observation

25 MarNIA N A

-31.938215Aaron Low 0

November (22) 2015 115 842638

+ show more 20 Mar -31.938392 TraceyObservation NIA N A

.... Multlmedla Select All 2015 115 842472 Cousens

Image F e (333) Observation20 Mar

NIA N A-31.938243 Tracey 0

?n1<; 11 <; R.d?F;Q r.n11c:Pnc:

11 II

.

,I.

,l

.

,I l

.

,l I

.l

,I

.

,I.

,I

.

il I,

Sign OutForest Pathology Logged n as adm n

The Marri App

Advanced Review

Refine results for 85 records returned

.... survey Select All Wiiiii,W mages Download

D New Site (43)n New Tree (400)

.... Within Area Select All

.... Year Select All

n 2000 (1)0 2013 (176)[l 2014 (194)0 2015 (72)- -.... Month Select All- -n January (52)D February (90)n March (77)O Apr (6)n May (24)O June (36)n July (4)O August (29)~ September (85)O November (22)

+ show more

.... Multimedia Select All

D Image File (333)

i i

I

il

Sign OutForest Pathology Logged in as admin

The Marri App

Advanced Review

Refine results for 338 records (662 images) returned

.... survey Select All Images Down oad

New Site (14)Results per page 20 •

New Tree (324)

.... Year ....,.... Within Area Select All

2013 (93) Bobnpip Bobnpip Bobnp1p Bobnpip Bobnp1p14 Sep 2014 14 Sep 2014 14 Sep 2014 14 Sep 2014 14 Sep2014

2014 (183)2015 (62)

.... Month Select All

January (40)February (82)March (53)April (3) Bobnpip Bobnpip Bobnp1p Bobnp1pMay (2) 14 Sep 2014 14 Sep 2014 14 Sep 2014 14 Sep 2014

June (26)July (2)August (18)September (83)November (15)

+ show more

.... Multimedia Select AllBobnpip Bobnp1p Bobnpip Bobnpio Bobnp1p

14 Sep 2014 14 Sop 2014 14 SOp2014 14 Sop 2014 14 Sep 2014Image Fi e (333)

.... Record Type Select All

l

l

Sign OutForest Pathology Loggedin as admin

The Marri App

New TreeC ick on the map to set the ocat on of the sighting. You can drag the newlycreated location around the map to changethe coordinates Show Map

Unlockform for editingDate 14 Sep 2014 Cankers

Latitude -33 58584Photo of canker

Longitude 115 076588

Accuracy (meters) 10.0

Time 15:36

Created 14/09/201423 01 by Robert Jarv s

Last Updated 14/09/201423 01 by Robert Jarvs

Tree Species Marri

Diameter at breast height (cm) 130Number of Trunk Cankers 3+

Photo of treeNumber of Branch Cankers <3

Number of Twig Cankers Can t see

Leaf/Flower Blight

Photo of Leaf/Flower Blight

QSB on Leaves? Can't See

QSB on Flower Buds? Can t See

QSB on Flowers? Can't See

QSB on Fruit? Can't See

l l i .

.

.

: i

: i

'

'

S gn OutForest Pathology Logged n as admin

The Marri App

Advanced Review

Refine results for 333 records returned

.... survey Select All Search with n results W1iih,M Images Download

New Site (43)New Tree (400) Click to Download

.... Within Area Select All Please choose the desired formats and c ick the button below to download the current search results as a zip file.

.... Year Select AllKeyho e Markup Language (KML) - Can be used for Google EarthShapefi e (SHP) - Can be used in GIS applications such as QGIS.

2000 (1) Spreadsheet (XLS) - Can be used for Spreadsheet Applications2013 (176)2014 (194) Download2015 (72)

.... Month Select All

January (52)February (90)March (77)April (6)May (24)June (36)July (4)August (29)September (85)November (22)

+ show more

.... Multimedia ., Select All

0 Image File (333)

ii

I

l

ll ,

Sign OutForest Pathology Logged in as admin

The Marri App

Advanced Review

Refine results for 333 records returned

.... survey Select All SC'archwith n r su •s Download

n New S te (43)n New Tree (400) Click to Download

.... Within Area Select All Please choose the desired formats and cl ck the button below to download the current search results as a zip file

.... Year Select All Keyhole Markup Language (KML) - Can be used for Google EarthShapefile (SHP) - Can be used in GIS applications such as QGIS

n 2000 (1) Spreadsheet (XLS) - Can be used for Spreadsheet Applications0 2013 (176)n 2014 (194) Download0 2015 (72)

.... Month Select All

n January (52)D February (90)n March (77)O Apr (6)n May (24)n June (36)nJuly (4)[l August (29)[l September (85)D November (22)

+ show more

.... Multimedia " SelectAII

~ Image File (333)

i

i .

, .

il

_,._............,.__- -· ...

t 18..N''-(nlLL' \c:IC_,(C TO\fO~lfOlt(o.tt.V&l• (-U.Of'#tlL•().~Ual.J)C.A,.,.,.v.,a .'-.'C..m-t,....,.c,.tA..'Q..>.1£'"1:arn

,,._,~'!l~--=.e~~~-~.l.'.l_.:...t·.,._..:..-.._-.-, :-.:,:.,-.,~ -..,-.L-n -~-,I.Ml...--.-.:...:._-:_.:.-...:-:r...:...:,....:..._.~... .-

.=..:..-.•-.•_=-..:-..w.:..,.-.-:-:..:o:.w: ~•--..,c.....

.._...............,.......,_~ _..._..-.....-... , .... ...-....-........_...._. _...,

c-._-,..,,,

._., ..........._._._........

_ .......?.'......................._ ....,

..,,_

.-...-...-.-..-.---.----•.................. ...._.,._.._

_"•.-'4'-.ff".-.•.

4

-,.._.-·_-..-

~....-,.,.._-.,-'-._.....

-..--.-.~-....-...-_-_-..-.-.,.-• ·--------

......

.. . ·- .-· ... 1 "--·----•.......

-.a..,....._,.._, ._. -_.._... .-,~ ... .....

.,, -•-_ -....-..·.-....-.....,..-._-,-,,-..-.-..-.-,.-...•._·...:=.:.::-~---.........

------ --,

, -·· ...-

r-· . . -·K- L·~-~--·n- ...._ ~...-,_.:

...,... _ ...,_.IW,o,,

_

I ,.J_.. .t. .... fl~f4,.,_

Research papers

Harvest

Citizen Science BORS

Contribute

Coastal Walkabout

..., .._... _.,...,._._...~... . ..-..._.....,...--

Communityportals

Appleilunes

AndroidPlay

Download Share

~?~~e

g(&9GeoEagleBay Capel= Map options Occurrence information (1 occurrence) Dunsborough G>

Yallingup Busselton

Scientific name Quambalar a pitereka Busselton

Kingdom EYn9iFam ly Quambaaraceae G>Data prov der Australia s Virtua Herbar umLongitude 115 2 Latitude: -34 3 (zoom to) GracetownQuambalar a p tereka Spat al uncerta nty n metres 10000 metres BaOccurrence date 09/2004

Marg~t RiverLayer name Quambalaria pitereka Rename Full record View deta s

Density grid • Points Assign record to ad hoc group Jalbe

G>User defined coour

••• ••••••• G>Hamelin Bay Scott

60% River East

August4 Leeuwin

., Display spatial uncertainty as a circle

< 30km (mapped with actual radius)

Q > 30km (mapped with 30km radius)

show Terms of Use Report a map error

:

: i:

i : l ii : ' l i: . , .

i i i i i : i

:: il

l•••

DatasetPARKSANDWILDLIFE Data provider

Data quality tests Data resource

Institutionfailed: 0

warnings: 3 Collectionpassed 37

missing 8 Cata ogue number

unchecked 37 Basis of record

(} 'view full data quality report Identified by

Identified date• F ag an issue

Identifier role

m Original vs Processed Field number

Identification remark

Locaton of record Collector

Collecting number

r MapCollecting date

,Occurrence remarks

(Perth

0

... f Occurrence status

Collection codery

Date identified

Identification id

Search the Atlas

Australia's Virtual Herbarium

Australia's Virtual Herbanum

Western Australia, Department of Parks and WildlifeSupplied tnstuution code PERTH"

Western Australian Herbariurn:

: l PERTH7576447

· Preservedspecimen

T Paap et al.

2007-10·301 l

Cit

MUCC448

s Cited by T. Paap et al. in Mycol Res 112.64(2008)

i Paap,T.

MUCC448

2004-09-15

WAC 12956.

present

PERTH

2007-10 30

3523818

Results

Since Dec 2013 the apphas helped capture:• 138 registered users• 366 observations• 335 trees in 31 sites• and over 300 images.

Discussion

The development of this innovative app has provided:• education and outreach opportunities• ongoing engagement with concerned members of the

community in both urban and rural regions• a large scale data collection approach that would otherwise

be a laborious and costly research problem• data that will be used by research scientists to understand

the decline process and find treatments with the aim ofdeveloping sustainable management solutions.

Marri Canker project – lessons learned

roles of each partner agency must be clearly defined:• project ownership, coordination, training and publicity

training helps deliver the best from volunteers in both:• project research methods and smart phone app technology

development/maintenance of a successful app requires resources:• engage with app developers to specify requirements, define functionality• ensure adequate support for the app subsequent to its release.

The Marri Canker project is now:• a model for a new 100 tree treatment trial in the Shire of Mundaring• again in conjunction with the Eastern Metropolitan Regional Council.

AcknowledgementsWith thanks to the:• Cape to Cape Catchment Group• Eastern Metropolitan Regional Council• WA State Natural Resource Management Office

ReferencesPaap T, Burgess TI, McComb JA, Shearer BL, Hardy GESJ (2008).Quambalaria species, including Q. coyrecup sp. nov., implicatedin canker and shoot blight diseases causing decline of Corymbiaspecies in the southwest of Western Australia.Mycological Research 112: 57–69.

Download the Marri App

http://citizensciencehub.gaiaresources.com.au/