Tuberculosis E-health module in care2x for improved ...

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The Nelson Mandela AFrican Institution of Science and Technology NM-AIST Repository https://dspace.mm-aist.ac.tz Computational and Communication Science Engineering Masters Theses and Dissertations [CoCSE] 2019-03 Tuberculosis E-health module in care2x for improved healthcare delivery at Kibong’oto infectious diseases hospital Mark, Patrick Njau NM-AIST http://dspace.nm-aist.ac.tz/handle/123456789/260 Provided with love from The Nelson Mandela African Institution of Science and Technology

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The Nelson Mandela AFrican Institution of Science and Technology

NM-AIST Repository https://dspace.mm-aist.ac.tz

Computational and Communication Science Engineering Masters Theses and Dissertations [CoCSE]

2019-03

Tuberculosis E-health module in care2x

for improved healthcare delivery at

Kibong’oto infectious diseases hospital

Mark, Patrick Njau

NM-AIST

http://dspace.nm-aist.ac.tz/handle/123456789/260

Provided with love from The Nelson Mandela African Institution of Science and Technology

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TUBERCULOSIS E-HEALTH MODULE IN CARE2X FOR IMPROVED

HEALTHCARE DELIVERY AT KIBONG’OTO INFECTIOUS

DISEASES HOSPITAL

Patrick Njau Mark

A Dissertation Submitted in Partial Fulfillment of the Requirements for the Degree of

Masters in Information and Communication Science and Engineering of the Nelson

Mandela African Institution of Science and Technology

Arusha, Tanzania

March, 2019

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ABSTRACT

Tuberculosis (TB) continues to be a global cause of millions of deaths yearly. The World

Health Organization (WHO) believes that TB can completely be eliminated with proper

treatment and monitoring tools and systems in place. It has therefore developed a strategy to

end TB worldwide, the Stop TB Strategy focusing on eliminating TB by 2035. World Health

Organization recommends the use of Electronic Medical Recording (EMR) systems to support

data managements in care and treatment of TB patients. At Kibong’oto Infectious Diseases

Hospital (KIDH), formerly Kibong’oto National TB Hospital (KNTH) in Tanzania,

management of TB care and treatment data used a paper-based system. Therefore, this study

aimed to improve management of TB at KIDH through digitization of TB care and treatment.

To accomplish the aim, a module was developed, integrated and tested in the existed Care2x

Hospital Management Information System (HMIS). Care2x HMIS being web based and open

source modular system, developed using Hypertext Pre-processor (PHP), Hypertext Markup

Language (HTML) and JavaScript and using My Structured Query Language (MySQL)

backend database for data storage, enabled extending its functionality by developing and

integrating into it a module to provide means for capturing and storing WHO recommended

TB data elements. The viability of the developed module is to improve capturing of all required

TB care and treatment data elements through imposing data validation rules, controlled access

to TB data, timely reports generation with reduced human effort, easy monitoring of patients’

treatment and reducing running costs. Thus, generally improving overall TB management.

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DECLARATION

I, Patrick Njau Mark, do hereby declare to the Senate of the Nelson Mandela African Institution

of Science and Technology that, this dissertation is my own original work and that it has neither

been submitted nor being concurrently submitted for degree award in any other institution.

Patrick Njau Mark _______________________ ________________

Name and signature of candidate Date

The above declaration is confirmed

Dr. Mussa A. Dida _______________________ _________________

Name and Signature of Supervisor 1 Date

Dr. Anael E. Sam ________________________ _________________

Name and Signature of Supervisor 2 Date

13/03/2019

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COPYRIGHT

This dissertation is copyright material protected under the Berne Convention, the Copyright

Act of 1999 and other international and national enactments, in that behalf, on intellectual

property. It must not be reproduced by any means, in full or in part, except for short extracts in

fair dealing; for researcher private study, critical scholarly review or discourse with an

acknowledgement, without the written permission of the office of Deputy Vice Chancellor for

Academics, Research and Innovations, on behalf of both the author and the Nelson Mandela

African Institution of Science and Technology.

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CERTIFICATION

The undersigned certify that they have read and found the dissertation conform to the standard

and format acceptable by the Nelson Mandela African Institution of Science and Technology.

Dr. Mussa A. Dida _________________________ _________________

Name and Signature of Supervisor 1 Date

Dr. Anael E. Sam __________________________ _________________

Name and Signature of Supervisor 2 Date

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ACKNOWLEDGEMENTS

Firstly, I would like to thank GOD ALMIGHTY for His endless Blessings, good health and

opportunities He has provided me with that enabled me to undertake a Master’s program at The

Nelson Mandela African Institution of Science and Technology (NM-AIST) which

incorporated this study.

My sincere thanks go to my supervisors, Dr. Mussa Ally Dida and Dr. Anael Elikana Sam for

their support, guidance and valuable time they dedicated to ensure this research work is a

success.

I would also like to express my gratitude to the African Development Bank (AfDB) for their

funding of my studies at NM-AIST and support in this research work.

Special thanks go also to my parents, my wife, my kids and all my family members for their

support, prayers and encouragements during the whole period of undertaking my master’s

studies.

Sincere appreciations go to my colleagues at NM-AIST, all staff members, the surrounding

community and my co-workers at Moshi Co-operative University (MoCU), thank you all.

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DEDICATION

To my family, I dedicate this work.

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TABLE OF CONTENTS

ABSTRACT ................................................................................................................................ i

DECLARATION ....................................................................................................................... ii

COPYRIGHT ........................................................................................................................... iii

CERTIFICATION .................................................................................................................... iv

ACKNOWLEDGEMENTS ....................................................................................................... v

DEDICATION .......................................................................................................................... vi

TABLE OF CONTENTS ......................................................................................................... vii

LIST OF TABLES ..................................................................................................................... x

LIST OF FIGURES .................................................................................................................. xi

LIST OF APPENDICES .......................................................................................................... xii

LIST OF ABBREVIATIONS ................................................................................................ xiii

CHAPTER ONE ........................................................................................................................ 1

INTRODUCTION ..................................................................................................................... 1

1.1 Background Information ............................................................................................. 1

1.2 Research Problem ........................................................................................................ 2

1.3 Objectives .................................................................................................................... 2

1.3.1 General Objective ................................................................................................ 2

1.3.2 Specific Objectives .............................................................................................. 2

1.4 Research Questions ..................................................................................................... 3

1.5 Significance of the Study ............................................................................................ 3

1.6 Limitations and Assumptions of the Research ............................................................ 3

CHAPTER TWO ....................................................................................................................... 4

LITERATURE REVIEW .......................................................................................................... 4

2.1 Introduction ................................................................................................................. 4

2.2 Tuberculosis ................................................................................................................ 4

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2.3 E-health ....................................................................................................................... 4

2.4 Hospital Information Systems Implementations in Tanzania ..................................... 5

2.5 Related Works ............................................................................................................. 6

2.5.1 E-Health and TB Care in Developed Countries ................................................... 6

2.5.2 E-Health and TB Care in Developing Countries ................................................. 6

2.6 Research Gap............................................................................................................... 8

2.7 Factors to Consider in Designing the TB Module....................................................... 8

CHAPTER THREE ................................................................................................................... 9

MATERIALS AND METHODS ............................................................................................... 9

3.1 Introduction ................................................................................................................. 9

3.2 The Research Case Study Area ................................................................................... 9

3.3 Sample Size and Sampling Techniques ...................................................................... 9

3.4 Data Collection Methods ........................................................................................... 10

3.4.1 Questionnaires.................................................................................................... 10

3.4.2 Interviews ........................................................................................................... 10

3.4.3 Documents Review ............................................................................................ 10

3.4.4 Care2x HMIS Review ........................................................................................ 10

3.5 Data Analysis Methods ............................................................................................. 11

3.6 Requirements Analysis .............................................................................................. 11

3.6.1 Functional Requirements ................................................................................... 11

3.6.2 Non-Functional Requirements ........................................................................... 12

3.7 Architectural Design ................................................................................................. 12

3.7.1 Decision Logic ................................................................................................... 12

3.7.2 Conceptual Design ............................................................................................. 13

3.7.3 Use Case Diagram.............................................................................................. 14

3.7.4 Data Flow Diagram ............................................................................................ 16

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3.7.5 Database Schema ............................................................................................... 18

3.8 Module Development Approach ............................................................................... 20

3.8.1 Development Methodology ............................................................................... 20

3.8.2 Tools and Technologies Used ............................................................................ 21

3.8.3 Requirements for Operating Environment ......................................................... 21

3.9 Assumptions and Dependencies ................................................................................ 21

CHAPTER FOUR .................................................................................................................... 22

RESULTS AND DISCUSSION .............................................................................................. 22

4.1 Introduction ............................................................................................................... 22

4.2 Research Case Study Area Results and Discussion .................................................. 22

4.3 Developed TB module in Care2x HMIS ................................................................... 25

4.4 Module Testing ......................................................................................................... 31

4.4.1 Unit testing ......................................................................................................... 31

4.4.2 Integration Testing ............................................................................................. 32

4.4.3 System Testing ................................................................................................... 32

4.5 Module Validation Testing........................................................................................ 33

4.6 Results Discussion..................................................................................................... 38

CHAPTER FIVE ..................................................................................................................... 40

CONCLUSION AND RECOMMENDATIONS .................................................................... 40

5.1 Conclusion ................................................................................................................. 40

5.2 Recommendations ..................................................................................................... 41

REFERENCES ........................................................................................................................ 42

APPENDICES ......................................................................................................................... 47

RESEARCH OUTPUTS .......................................................................................................... 64

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LIST OF TABLES

Table 1: Number of Employees at Kibong'oto National TB Hospital as of May 2018 ............. 9

Table 2: Description of user roles for integrated TB module in Care2x HMIS ...................... 16

Table 3: Components of DFDs ................................................................................................ 17

Table 4: Responses for integrated Care2x HMIS and TB module will reduce paper work .... 23

Table 5: Responses for integrated Care2x HMIS and TB module will improve patient's data

management .............................................................................................................. 23

Table 6: Responses for integrated Care2x HMIS and TB module will increase accuracy in

creating reports.......................................................................................................... 24

Table 7: Responses for integrated Care2x HMIS and TB module will reduce running costs . 24

Table 8: Results of TB module integration testing .................................................................. 32

Table 9: Summary of the users’ responses on validation testing ............................................. 34

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LIST OF FIGURES

Figure 1: Patients flow with integrated TB Module in Care2x ................................................ 13

Figure 2: TB module development framework ........................................................................ 14

Figure 3: Use cases diagram for the integrated TB module in Care2x HMIS ......................... 15

Figure 4: Context diagram for the TB module in Care2x HMIS ............................................. 17

Figure 5: Level 1 DFD for the TB module in Care2x HMIS................................................... 18

Figure 6: Logical database design for the integrated TB module in Care2x HMIS ................ 19

Figure 7: Agile Methodology................................................................................................... 20

Figure 8: The login page to TB Module .................................................................................. 25

Figure 9: TB module successful login homepage .................................................................... 26

Figure 10: Registration of first time patient to TB care ........................................................... 27

Figure 11: Registration interface for MDR-TB patient ........................................................... 28

Figure 12: MDR-TB patient treatment episodes and outcomes............................................... 29

Figure 13: Homepage for the selected registered patient into TB care .................................... 30

Figure 14: Form for taking daily medications of TB patients ................................................. 31

Figure 15: Results for the statement the developed TB module is interactive ........................ 35

Figure 16: Results for the developed TB module is easy to learn ........................................... 36

Figure 17: Results for the developed TB module aligned with the requirements ................... 37

Figure 18: Results for the developed TB module captures most of the required TB data elements

................................................................................................................................. 38

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LIST OF APPENDICES

Appendix 1: Questionnaires for Data Collection ..................................................................... 47

Appendix 2: User Validation Testing Questionnaire ............................................................... 62

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LIST OF ABBREVIATIONS

DOTS Directly Observed Treatment-Short Course

EERD Enhanced Entity Relationship Diagram

EMR Electronic Medical Records

GoTHOMIS Government of Tanzania, Hospital Management Information System

HMIS Hospital Management Information System

ICT Information and Communication Technology

KIDH Kibong’oto Infectious Diseases Hospital

KNTH Kibong’oto National TB Hospital

LUICO Lutheran Investment Company

MDR Multi-Drug Resistant

MoHCDGEC Ministry of Health, Community Development, Gender, Elderly and Children

MoHSW Ministry of Health and Social Welfare

MVC Model View Controller

NHIF National Health Insurance Fund

PORALG President’s Office, Regional Administration and Local Government

RR Recording and Reporting

TB Tuberculosis

USSD Unstructured Supplementary Service Data

WHO World Health Organization

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CHAPTER ONE

INTRODUCTION

This chapter presents the general overview of the research study focusing on global

Tuberculosis burden and describing the existing problem in TB care and treatment at

Kibong’oto Infectious Diseases Hospital (KIDH). It also describes the objectives of

undertaking the study, the questions that this research aims to answer, the justification of

undertaking the study, limitations and assumptions of the research.

1.1 Background Information

Tuberculosis (TB) is an infectious airborne disease that normally affects the lungs but may also

affect other parts of the body (Agyeman and Ofori-Asenso, 2017). Tuberculosis continues to

be a major global cause of death with poorest communities being the most affected. There are

millions of new TB cases and more than a million deaths worldwide yearly, 1.8 million deaths

in 2015 (Falzon et al., 2016) and 1.7 million deaths in 2016 (WHO, 2018). According to the

World Health Organization (WHO), TB prevalence is still high in Tanzania with 306

incidences of TB out of 100 000 population as reported in 2015 (WHO, 2017). With proper

medication and care, majority of TB cases can be cured (Falzon et al., 2015).

To support the global TB burden, WHO has a strategy to end TB worldwide by 2035 (Falzon

et al., 2016), the Stop TB Strategy (Kigozi et al., 2017), which recommends the use of

electronic data Recording and Reporting (RR) (Perumal and Desai, 2014). World Health

Organization believes that, ICTs present opportunities to innovate in support of TB care and

prevention efforts (Falzon et al., 2016). The success of this strategy depends much on RR

system for TB surveillance (Nadol et al., 2008). To support this strategy, many countries run

national TB control programs which are normally under the country’s respective ministry of

health (Konduri et al., 2017) and some have implemented e-health systems to manage

information in those programs. These systems help to integrate primary care (by which

practitioners record routine clinical patients’ data to the systems) and public health practices

by analyzing data and producing real time reports and indicators for diseases to public health

departments (Klompas et al., 2012) for policies creation and planning.

Several e-health systems that are clinical in focus have been implemented to transform medical

care by increasing the safety, quality, and efficiency in handling patients’ clinical data

(Klompas et al., 2012; Kukafka et al., 2007). On the other hand, specialized e-health systems

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for diseases which some have national control programs (such as TB) that require more than a

generic e-health system have also been developed.

Tanzania has designated Kibong'oto Infectious Disease Hospital (KIDH) for TB care and

treatment. It became a national tuberculosis hospital (KNTH) in 1956 and in 2010 KIDH

received approval from the WHO to treat Multi-drug Resistant TB (MDR-TB) patients

(stoptb.org, 2014). However, at KIDH, the Hospital Management Information System (HMIS)

in use, Care2x, maintains clinical information for patients but does not have a module for TB

care making TB data for respective patients under TB care to be recorded in special paper forms

provided by the Ministry of Health (MoH). Therefore, this study aimed at improving the

management of TB by developing a web-based module in Care2x HMIS to facilitate the

capture, transfer and reporting of the TB data elements as well as integrating patients’ other

clinical data with TB data. The reporting format conforms to the WHO-recommended TB data

elements (Nadol et al., 2008).

1.2 Research Problem

Tuberculosis being a sensitive disease that requires long time treatment and follow up for six

to nine months (Horsburgh et al., 2015) and up to two years for drug resistant TB, it is essential

for e-health system to support delivery of quality healthcare, data recording and reporting.

However, the deployed e-health system at KIDH, Care2x HMIS, had most of the generic

functions to support clinical care and treatment but missing a module for TB healthcare

delivery, recording and reporting. All the care and treatment activities for TB patients were

paper-based. Therefore, this research has introduced the use of ICT to digitize TB care by

developing and integrating into Care2x HMIS, a module for TB care and treatment that sought

to improve healthcare delivery to TB patients and overall TB management at KIDH.

1.3 Objectives

1.3.1 General Objective

The general objective of this study was to develop a web based module for improved healthcare

delivery, monitoring and reporting for TB patients in Care2x HMIS.

1.3.2 Specific Objectives

The specific objectives of this study were:

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(i) To identify, gather and analyze the requirements for TB module for healthcare delivery,

monitoring and reporting in Care2x HMIS.

(ii) To develop and integrate with Care2x HMIS, a TB module for healthcare delivery,

monitoring and reporting.

(iii) To validate the developed module for TB in Care2x HMIS.

1.4 Research Questions

The following research questions were used to guide the conduction of this study to attain its

objectives:

(i) How is the existing TB care and treatment practiced and what are requirements for

developing a TB module in Care2x HMIS?

(ii) What methodologies will be suitable to be applied in designing and developing a module

for TB healthcare delivery, monitoring and reporting in Care2x HMIS?

(iii) How will the developed TB module in Care2x MHIS be tested and validated?

1.5 Significance of the Study

This study would be of interest to KIDH, the Ministry of Health, Community Development,

Gender, Elderly and Children (MoHCDGEC), scholars, policy makers, e-health enthusiasts and

other stakeholders in community health. To improve healthcare delivery to TB patients and

follow up at KIDH, the generic healthcare system, Care2x HMIS needed improvement. With

the TB module, the Care2x HMIS will be able to record TB data for generating WHO

recommended reports as well as facilitate integrating other clinical data for TB patients with

their respective TB data. This study will also create a base for further research on mobile

integration for improvement of TB care (Denkinger et al., 2013) via provision of m-health

services (Falzon et al., 2015) and information via mobile technologies such as mobile phones

and personal digital assistants (Falzon et al., 2016).

1.6 Limitations and Assumptions of the Research

The first limitation of this study is that it is focused on one health facility only. However, it is

assumed that, since KIDH is a National designated facility for TB care, and the guidelines

provided by the WHO and the MoHCDGEC apply to all facilities, the results of this study can

be applied to several other facilities that run Care2x HMIS in the country.

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CHAPTER TWO

LITERATURE REVIEW

2.1 Introduction

This chapter presents the general concepts of TB and e-health. Furthermore, it explores HIS

implementations in Tanzania and related literatures to e-health and TB care in developed and

in developing countries.

2.2 Tuberculosis

Tuberculosis is an infectious airborne disease acquired by inhaling the bacteria Mycobacterium

tuberculosis (M. tb) that causes the disease (Agyeman and Ofori-Asenso, 2017). When inhaled

through the nasal passage and reach the alveoli of the lungs, a person becomes infected.

Majority of those who become infected (90%) show no sign of disease, a condition called latent

infection. However, those with latent infection are at risk of developing active TB later. About

one third of the world population (2 billion) is infected by the TB bacteria. The bacteria usually

attacks the lungs, but any other part of the body such as brain, kidney and spine can be attacked

by the TB bacteria (Agyeman and Ofori-Asenso, 2017; Schraufnagel, 2010).

Latent TB infection and TB disease can both be treated. If left untreated, latent TB can develop

in to TB disease which can be fatal if not properly treated (CDC, 2018). From the mid-1990s,

a standardized paper-based system for recording and reporting TB treatment was rolled out

worldwide. The paper-system includes TB treatment cards that record patient’s information

about the history of treatment; TB registers which document data for all cases within a

particular health-care facility; quarterly reporting forms for sending summaries of aggregated

data on notifications and treatment outcomes for all cases in the area (WHO, 2012). The

development of science and technology calls for digitization of the paper-based system of TB

care so as to have among other benefits, improved data quality, reduced workload, improved

access to data and timeliness information (WHO, 2012).

2.3 E-health

E-health can be defined as “the use of ICTs in health products, services and processes combined

with organizational change in healthcare systems and new skills, in order to improve health of

citizens, efficiency and productivity in healthcare delivery, and the economic and social value

of health” (Barbabella et al., 2016). World Health Organization defines e-health as use of ICTs

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to ensure timely provision of correct health information when that information is needed and

to the ones needing it, securely and in electronic form, for improved quality and efficiency in

healthcare delivery and prevention programs (WHO, 2017). The use of ICTs in TB care for

Directly Observed Treatment (DOT) has proven to improve adherence to treatment and clinical

outcomes (Ngwatu et al., 2018) as well as the overall management of TB.

2.4 Hospital Information Systems Implementations in Tanzania

Care2x HMIS, a web-based open source cross platform and modular integrated HMIS which

started as a sourceforge project in May 2002, and it was named care 2002 (Bouidi et al., 2017).

The system is written in Hypertext Pre-processor (PHP), Java, and JavaScript and runs in

Apache web server with My Structured Query Language (MySQL) backend database for

storing data. It has among other, modules for Registration and Admission, Doctors, Nursing,

Laboratory, Radiology, Billing, Pharmacy and Care and Treatment Clinic (CTC) (Care2X.org,

2018). The system being open source, it is being customized to meet the requirements for

Tanzania hospitals. The Lutheran Investment Company (LUICo) owned by the Evangelical

Lutheran Church in Tanzania (ELCT) is the one currently maintaining and customizing the

system in Tanzania (ELCT, 2018).

Several Hospital Information Systems other than Care2x HMIS have been implemented in

Tanzania. These include OpenMRS, Government of Tanzania Hospital Management

Information System (GoTHOMIS), Powerweb's Hospital Management Software, MediPro e-

Health and AfyaPro.

OpenMRS is open source software that was formed in 2004 for developing countries. It is

customizable as per health provider needs with no programming knowledge required

(Kalogriopoulos et al., 2009). OpenMRS was implemented in 3 sites in Tanzania in the year

2008, the sites being Morogoro Regional Hospital which is a referral hospital in Morogoro

region, Tumbi Special Hospital, a district hospital in Coast region and Ocean Road Cancer

Institute in Dar Es Salaam. This implementation meant to eliminate paper based Human

Immunodeficiency Virus (HIV) register forms by providing the National AIDS Control

Program (NACP) with a database for HIV/Acquired Immunodeficiency Syndrome (AIDS)

registry (Tierney et al., 2010). It is not indicated that OpenMRS had focus in management of

TB.

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On the other hand, GoTHOMIS which is owned by the Regional Administration and Local

Government of the Government of Tanzania has been implemented in over 170 facilities. An

overview of this software’s modules shows that it doesn’t have a module for TB care (PO-

RALG, 2017). Also, Powerwebs’s HMS is owned by an Information Technology (IT) company

operating in Tanzania known as PowerComputers Telecommunications Ltd, thus, not free to

customize (Powercomputers, 2017). Furthermore, MediPro e-Health developed by Maxcom

Africa PLC is a modular system based on J2EE standard driven architecture and is platform

and database independent (Maxcom Africa PLC- Maxmalipo, 2018). AfyaPro is also a Hospital

Management Information System (HMIS) that has core modules of registration, billing,

inventory, diagnosis and treatment, laboratory, RCH, in-patient and CTC (Afya Connect for

Change, 2015). The implementation of AfyaPro focused on Lake Zone regions in Tanzania.

All these implementations however, do not mention to focus on support for management of TB

or include integrated module for TB care.

2.5 Related Works

2.5.1 E-Health and TB Care in Developed Countries

To enhance national TB surveillance, United States of America (USA) implemented in March

2010, a web-based system called TB Genotyping Information Management System (TB

GIMS). The system provides online secured database of TB data integrated with genotype

results for TB programs at state and local level (Ghosh et al., 2012).

A web-based system called Tuberculosis Information Management System (TBIMS) was also

implemented in China and started to phase out the paper recording of TB surveillance data in

2005 (Huang et al., 2014). The system however focuses only on TB data recording and

reporting.

2.5.2 E-Health and TB Care in Developing Countries

Nadol et al. (2008) analyzed three systems, electronic tuberculosis register (ETR.Net),

Electronic Nominal TB Registration System (ENRS) and Electronic DOTS (eDOTS) which

was piloted tested in Uganda, Kenya, Micronesia, Mexico, Kyrgyzstan and Vietnam. ETR.Net

was tested in South Africa, Botswana and Tanzania. It is based on Microsoft.Net framework

and uses Microsoft Access and SQL server. An evaluation of ETR.Net in Eden District, South

Africa, shows that it is simple and acceptable proved success to support the TB control program

and reduced the incomplete data problem which existed in TB cards (Mlotshwa et al., 2017).

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Moreover, ENRS was tested in Egypt, Jordan, Sudan and Syria. It is Microsoft Excel based.

The two systems ETR.Net and ENRS do not eliminate the primary patient forms used for

maintaining patients’ data at the lowest level. Electronic DOTS (eDOTS) however, supports

patient-level data entry, data transfer to central computer as well as reports generations at

different levels but it is proprietary with associated fees. Its interface is Microsoft Windows

based and no communication with the hospital Health Information System (HIS).

On the other hand, Fraser et al. (2013) developed OpenMRS-TB, an open source EMR system

for Peru, Haiti, Pakistan, and other areas with resource constraints. The system support MDR-

TB data management and is also flexible to support other diseases.

In 2012, an android based system named Treatment Information from Basic Unit (TIBU) was

deployed in Kenya to replace paper TB data recording and reporting (Sharma et al., 2015;

Sitienei, 2016). The system syncs data with the national server through local data service

providers. The data can then be analyzed for reporting. Despite proving success for TB

surveillance in Kenya, the system had focus on TB only and did not solve the problem of

patients’ clinical data integration with TB data at facility level (Sharma et al., 2015; Sitienei,

2016).

In 2010, Lighthouse Trust and partners developed a user friendly EMR system for TB/HIV co-

infected patients that replaced the paper-based registers for TB and integrated with HIV

Antiretroviral Therapy (ART) EMR at Martin Preuss Centre (MPC) clinic in Malawi (Tweya

et al., 2016). The system is open source. It led to improved patient care, however focuses only

on the two care services, TB and HIV care (Tweya et al., 2016).

Another major implementation of TB e-health system in more than 10 countries, funded by

United States Agency for International Development (USAID) is the e-TB Manager. It was

done in countries in East, South and West Africa, Central and South Asia as well as Latin

America and the Caribbean. The system integrates all aspects of TB control data for national

TB control programs (Konduri et al., 2017). Ukraine started to use e-TB Manager in 2009 and

is one of the successful implementations nationwide (Konduri et al., 2017).

In addition to that, Pellison et al. (2017) in a project called ecosystem explain how tedious it is

to organize patients’ information to obtain compete history from different systems and TB data

for better treatment strategies. They worked to integrate data in different systems to have a

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single, complete database that is well organized to provide quality information for TB patients

that was piloted in a hospital of the State in São Paulo, Brazil.

2.6 Research Gap

Despite existence of several implementations of e-health HMIS and specialized systems for

TB care, majority of HMIS are not integrated with support or a module for management of TB.

Also the specialized systems focus on TB care only or integrated TB care and HIV co-infected

patients. This makes facilities to run two parallel RR systems which are not integrated nor share

data, leading to isolation of patients’ TB data from other clinical data. As previous studies have

shown focus on digitization of TB data recording and reporting with less focus on integration

of patients’ data, this study sought to improve TB management at KIDH through the use of

ICTs with focus on integrating all patients’ data in one place.

2.7 Factors to Consider in Designing the TB Module

In designing of TB module, several factors need to be considered which include Human

Computer Interaction (HCI), TB cases, structure of Care2x HMIS, data validation, standards,

reporting and security.

(i) Human Computer Interaction: the design of the interfaces for the module will be in

a way that is interactive such that it creates a balance between both functionality and

usability (Mathew et al., 2011).

(ii) Tuberculosis Cases: patients with TB fall under two categories, normal TB and drug

resistant TB. The module should be able to handle both cases and allow a transfer of

patient from normal to drug resistant TB.

(iii) Care2x HMIS Structure: the current modular structure of Care2x HMIS, technologies

used as well as intercommunication between the modules should be maintained to

ensure that the organization structure and flow of operations are not affected.

(iv) Data Validation: to ensure correct information is captured by the module, the design

should enforce data integrity rules as well as validation of input data.

(v) Standards: the standards provided by the WHO and MoHCDGEC will be followed.

(vi) Reporting: ability to generate reports and giving feedback on different conditions.

(vii) Security: controlled access to the module as well as protection of patients’ data

captured by the module will be enforced.

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CHAPTER THREE

MATERIALS AND METHODS

3.1 Introduction

This chapter focuses on describing the materials and methods employed in developing the

solution, the analysis, results and discussion.

3.2 The Research Case Study Area

This study selected KIDH located at 3°11'46.3"S 37°06'21.0"E coordinates in Siha district of

Kilimanjaro Region, Tanzania as a case study area. The targeted group was health services

providers for TB patients. The motive for selecting KIDH was to answer the first research

question “How is the existing TB care and treatment practiced and what are the requirements

for developing a TB module in Care2x HMIS?” as KIDH is the National designated facility for

providing care and treatment of TB patients. Kibong’oto Infectious Diseases Hospital started

in 1926 as a sanatorium for patients with tuberculosis. Since 1950, the hospital has undergone

several changes of its scope, its obligation as well as name. From being a Sanatorium, it has

transformed to TB hospital then to Kibong’oto National TB Hospital and consequently to

Kibong’oto Infectious Diseases Hospital in 2010. From November 2009, KIDH has been the

sole centre which provides treatment for MDR-TB patients in the country (KIDH, 2018).

3.3 Sample Size and Sampling Techniques

In conducting this study, purposive sampling was used to select KIDH since it is the facility

specialized in TB care and designated to treat TB in the country. The facility has a total 250

employees, clinical and non-clinical. The numbers are as shown in Table 1.

Table 1: Number of Employees at Kibong'oto National TB Hospital as of May 2018

Title Count Title Count

Doctors 21 Laboratory Personnel 11

Nurses 65 Radiologists 2

Medical Attendants 110 Pharmacists 5

IT personnel 2 Others 34

Total 250

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From different employees’ groups as shown in Table 1, stratified sampling was employed to

get participants from different strata based on profession. On each stratum, representatives

were selected randomly of which each had an equal chance. The selected representatives

comprised of 12 doctors, 26 nurses, 3 laboratory personnel, 1 radiologist, 2 pharmacists and 2

IT personnel.

3.4 Data Collection Methods

Collection of data from the study area was conducted in May 2018. The tools and techniques

employed in the collection of data were questionnaires, interviews as well as documents and

Care2x HMIS review. The tools and techniques are described below:

3.4.1 Questionnaires

The selected representatives were issued questionnaires with questions based on their

profession, and some general questions to all. Questions focused on the current situation, the

workflow of activities in TB patients’ care with the associated tools, challenges faced on care

giving and suggestions on what can be done.

3.4.2 Interviews

Some of the selected representatives along with filling the questionnaires, were also

interviewed. Each stratum had at least one representative. The interviews focused on getting

clarity on some medical terms and procedures involved in TB patients’ care that required

digitization.

3.4.3 Documents Review

Documentary analysis was done on all the provided paper work involved in TB care and

treatment. The reviewed documents include: patients TB registration card, TB treatment card

and MDR-TB forms, laboratory request and reporting form as well as TB drugs administration

sheet. The objective was to get all the required TB data elements that needed to be captured for

digitization, and the associated required reports.

3.4.4 Care2x HMIS Review

A review of the existing Care2x HMIS was done which focused on understanding the system

architecture, design and functionalities. From the review, it was found that the existed Care2x

HMIS was modular in structure with the following generic modules: registration and admission

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module, billing module, doctors’ module (for consultation), laboratory module, radiology

module, wards management and nursing care module, pharmacy module, appointments module

and reporting module. Each module supports a stage in the workflow of patients at the facility,

from registration to discharge. The system has two classes of patients, outpatients and

inpatients. The wards management and nursing care module is specifically for inpatient

admitted patients.

The new module for TB care was developed to work with existed modules in Care2x HMIS

such that, a TB patient follows the same existed workflow but with added items for TB care

and treatment in the TB module to capture TB data elements. The module utilizes

functionalities and data captured in other modules from patient’s registration, consultation,

prescriptions and tests requests and results, then integrates these data with TB data elements to

provide comprehensive reports as may be required.

3.5 Data Analysis Methods

Qualitative and quantitative methods were both employed in this study to get what was required

of the TB care digitization at KIDH. In analyzing quantitative results, the Statistical Package

for the Social Sciences (SPSS) was used. The qualitative and quantitative results are presented

in chapter four of this dissertation.

3.6 Requirements Analysis

Requirements analysis involved determining the requirements for the development of the

proposed TB module. All the necessary requirements for the development and integration of a

TB module in Care2x HMIS are into functional and non-functional system requirements.

Functional requirements indicate what the TB module will provide to its users whereas non-

functional requirements describe the properties of the module.

3.6.1 Functional Requirements

From the requirements analysis, the following functional requirements were established:

(i) The initial registration of TB patients should be through the registration and admission

module of the Care2x HMIS.

(ii) Admission of TB patients should be directed to the TB clinic/department in Care2x

HMIS for outpatient and to TB wards for inpatient admission.

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(iii) The registration of TB patients to TB care and treatment, for normal TB patients and

MDR-TB patients shall be done through the TB module.

(iv) Registration and treatment data in TB care shall be validated before submission to the

system via the TB module.

(v) Transfer of registered patients from normal TB care to MDR-TB care and treatment

will be through the TB module.

(vi) Lists and data for patients registered to TB care will be accessible by authorized users

through the TB module.

(vii) Daily medication of admitted patients in TB care will be through the TB module.

(viii) Other clinical data for patients registered to TB care will be available to authorized

practitioners through the integrated TB module.

3.6.2 Non-Functional Requirements

The following are non-functional requirements:

(i) The TB module will not depend on hardware implementation (hardware independent).

(ii) The TB module should have controlled secure access via login.

(iii) The TB module should be easy to learn and use.

(iv) High level of HCI support should be provided by the module.

(v) The TB module should run in any web browser (browser independent).

(vi) The TB module should be easily maintained and upgradeable.

3.7 Architectural Design

After analysis of both primary and secondary data, a decision logic and a framework for the

TB module development and integration in Care2x HMIS were developed.

3.7.1 Decision Logic

This study developed a flow for TB patients in relation to the existed modules in Care2x HMIS.

Once the registration and admission send the patient to TB clinic/department in the main

system, the list of patients in TB clinic gets updated and a user of the module can then access

the patient from the module. The patient, if is first time visit, provides additional information

which is recorded via the module. Figure 1 describes the designed patient flow with integrated

TB module in Care2x HMIS that would not affect the existed flow.

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Figure 1: Patients flow with integrated TB Module in Care2x

After accessing the patient through the module, the user fills in all other required clinical and

progress information for the respective patient’s visit. The user, most likely a doctor can issue

prescriptions, set appointments and others from the TB module through linked respective

modules. The required TB reports can then be generated from the Care2x HMIS.

3.7.2 Conceptual Design

As indicated in the decision logic, the integrated TB module would not work on its own but

utilizes data from other modules. At the first stage of registration and admission, TB patients

will be sent to TB clinic/department which will make them available in the integrated TB

module for further registration to TB care (if not yet registered) and treatment. Figure 2 shows

a conceptual framework for the integrated TB module in Care2x HMIS.

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Figure 2: TB module development framework

The framework shows that, all the modules including the TB module will share common

database storage making the data available in all modules.

3.7.3 Use Case Diagram

As first proposed by Jacobson (1986), a use case diagram is one of the Object Oriented

Diagrams used in system analysis as a methodology to identify, clarify, and organize system

requirements (Aleryani, 2016). This study employed use case diagrams to describe how users

will interact with the integrated TB module in Care2x HMIS. The parent Care2x HMIS already

has its dynamic categories of users. These categories will be improved per the requirement of

the facility on deployment of the module. The categories of users who will have access to the

module are all care providers with assigned respective privileges. These privileges will be

dynamically allocated to the TB module users as per Care2x HMIS security approach. The

categories of users who will have access to the integrated TB module are:

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(i) Registrar/Medical Records personnel

(ii) Doctors

(iii) Laboratory Scientists

(iv) Care and Support personnel that include nurses and medical attendants

Figure 3 shows the categories of users for TB module in Care2x HMIS and in relation to other

modules.

Figure 3: Use cases diagram for the integrated TB module in Care2x HMIS

As the privileges will be dynamically assigned, it will be possible to have more categories of

users in the future. Table 2 gives a description of each role that will be assigned to users of the

TB module in Care2x HMIS.

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Table 2: Description of user roles for integrated TB module in Care2x HMIS

Role Description

Registration The registrar will be able to register first time patients into TB care

and treatment and edit data for existing patients through the

module. First time patient must first be registered to Care2x HMIS

through its registration/admission module.

View patient history Actors will be able to view the patient’s clinical history through

the TB module

Add consultation notes The module will integrate with the doctors module of Care2x

HMIS and provide access for adding consultation notes by doctors

Request tests The module will integrate with laboratory and radiology modules

of Care2x HMIS for doctors to request tests

Lab results The laboratory and radiology personnel will be able to post their

findings to TB module

Add prescriptions Doctors will have a provision for adding prescriptions to TB

patients through the module

Drugs administration The module will provide means for nurses and medical attendants

who issue drugs and services directly to the admitted patients to

chart daily medications to TB patients.

View reports The module will provide access to view different TB care and

treatment reports to authorized users.

3.7.4 Data Flow Diagram

Data Flow Diagrams (DFDs) are tools to present program design by illustrating how data flows

in a system that have replaced flowcharts and pseudo codes (Aleryani, 2016; Le Vie, 2000).

Four basic components that make up DFDs are entity, process, data store, and data flow

(Aleryani, 2016). Table 3 defines the components of DFDs.

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Table 3: Components of DFDs

Component Description

Entity This is a data source or destination, represented by a rectangle

Process This is the manipulation of data to yield result, represented by a

circle

Data store This is the storage of data, represented by a rectangle

Data flow Is the movement of data between entities, process and data flow,

represented by an arrow

Data flow diagrams show the manipulation of input through a system process and its output.

Different levels of DFDs are used to present system design that include level 0 or context

diagram, level 1 and level 2 DFDs. This study uses context diagram and DFD level 1 to present

the flow of data in the integrated TB module with Care2x HMIS.

(i) Context Diagram

The external entities interaction with the system is presented by the context diagram. Figure 4

shows the context diagram for the TB module in Care2x HMIS.

Figure 4: Context diagram for the TB module in Care2x HMIS

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(ii) Level 1 Data Flow Diagram

Level 1 DFD presents a decomposed context diagram system process into sub-processes that

are connected by data flow and data store. Figure 5 shows proposed level 1 DFD for the TB

module in Care2x HMIS.

Figure 5: Level 1 DFD for the TB module in Care2x HMIS

3.7.5 Database Schema

The database schema presents the logical design of the database tables with their relationships

to each other. To capture all the required TB data elements via a TB module, twenty-five (25)

new tables were added to Care2x HMIS database and four existing tables modified by adding

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new columns. The modified tables carry data about patients’ visits, prescriptions, test requests

and findings. Figure 6 describes the logical database design for the integrated TB module in

Care2x HMIS.

Figure 6: Logical database design for the integrated TB module in Care2x HMIS

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3.8 Module Development Approach

3.8.1 Development Methodology

Any software development follows a methodology, that is, a set of rules and guidelines used in

the process of planning, designing, developing, testing, setup and maintaining a software

product (Despa, 2014). In following these set of rules and guidelines, a System Development

Lifecycle (SDLC) is created. Several methodologies exist, however this study used agile

methodology to develop the TB module in Care2x HMIS. Agile methodology combines

iterative and incremental processes that are repeated over and over until customer satisfaction

is reached. It follows the principles to satisfy customer, welcome changes, deliver working

product often and other principles (Eason, 2016). The main advantages of agile methodology

are reduced development time, active customer participation in the process and effective

response to change that leads to customer satisfaction. The agile methodology is described in

Figure 7.

Figure 7: Agile Methodology

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3.8.2 Tools and Technologies Used

The development of the TB module employed different web technologies, programming

languages as well as other development support tools. The tools are as follows:

(i) Hypertext Pre-Processor (PHP) programming language

(ii) Hypertext Markup Language version 5 (HTML5) for interface development

(iii) JavaScript Scripting Language for improved interactivity

(iv) Cascading Style Sheets (CSS) to format interfaces

(v) Apache web server

(vi) My Structured Query Language database server and MySQL workbench

(vii) NetBeans Integrated Development Environment (IDE)

3.8.3 Requirements for Operating Environment

Since the system and the module are web based, following constraints apply on the operability

of the module.

(i) Server: A computer server running any operating system and a web server.

(ii) Local Area Network or Internet: for the user to access the system and module, he/she

will need a connection to the server which can be a local server via Local Area Network

(LAN) or an online server via internet for remote connection.

(iii) Web Browser: The client computer/device will need a web browser to access the system.

3.9 Assumptions and Dependencies

One assumption about the TB module is that it will not be able to operate on its own but will

always use data from registration/admission module data from other modules. Another

assumption is that Care2x HMIS will be accessible from all devices that have a web browser

and have a connection/link to the server and that users have basic computer skills. For interface

design, bootstrap was employed to support mobile devices with low resolution.

One dependency is that all users of the TB module will utilize the existing login interface to

Care2x HMIS which then gives access to other all allowed modules.

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CHAPTER FOUR

RESULTS AND DISCUSSION

4.1 Introduction

This chapter presents the results from the analysis of data collected from the research study

area and presents the developed TB module in Care2x HMIS as well as validation testing of

the developed module.

4.2 Research Case Study Area Results and Discussion

The study sought to find out how TB care was being practiced using paper based system at

KIDH which is a National designated facility for TB care and treatment. The aim was to assess

the need and requirements for the digitization of the paper based system.

From the case study area, all questionnaires issued were filled by the participants (100%

response). It was clear from the responses that the patient flow of TB patients is not different

from other patients. The flow starts from registration then to consultation rooms, laboratory (if

tests are requested), and pharmacy and then discharged. If a patient is admitted to Inpatient

Department (IPD), he/she will be allocated to ward. After treatment, a patient will be

discharged. Majority of respondents provided an understanding of the same workflow.

In attending TB patients, the following paper works are produced which need digitization:

Patient TB register, patient file, patient laboratory request form, laboratory registers, patients’

monitoring sheet/treatment card and adverse drug effects. All respondents (100%) indicated a

need for the digitization of TB care. The main reason given by majority of respondents was to

simplify data capturing and retrieving/reporting and to reduce paper works. One doctor

responded;

“I want to be able to get different reports from the system that are linked to TB care.

For example, TB patients who are also on ART or patients with TB and diabetes, or

patients on TB care who suffered a certain drug reaction etc. and the like by age, sex

and so on without a need to analyze one treatment card after another”.

Another responding doctor further added that;

“Some people are on TB care but their data are missing….cannot be found anywhere”.

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In addition to that, majority of the respondents showed a need for a TB module to be developed

and integrated in Care2x HMIS rather than having a separate system for TB care.

Also, the results of analysis of data from the case study area which were analyzed using SPSS

are presented. Questions focused to access users’ view on the importance of the module in

which health practitioners were asked to assess the extent to which integrated Care2x HMIS

and TB module will reduce paper work, improve patients’ data management, increase accuracy

in creating reports and reduce running costs. The criteria for assessment was based on the scale

of strongly disagree, disagree, neutral, agree, and strongly agree. Majority of respondents

(50%) strongly agreed that the module will reduce paper work whereas (38.6%) of them agreed

and the rest (11.4%) were neutral. Table 4 shows the results.

Table 4: Responses for integrated Care2x HMIS and TB module will reduce paper work

Valid Criteria Frequency Percent Valid Percent Cumulative Percent

Neutral 5 11.4 11.4 11.4

Agree 17 38.6 38.6 50.0

Strongly Agree 22 50.0 50.0 100.0

Total 44 100 100

On improvement of patients’ data management, 56.8% of the respondents strongly agreed and

43.2% agreed while none was neutral nor disagreed as shown in Table 5.

Table 5: Responses for integrated Care2x HMIS and TB module will improve patient's data

management

Valid Criteria Frequency Percent Valid Percent Cumulative Percent

Agree 19 43.2 43.2 43.2

Strongly Agree 25 56.8 56.8 100.0

Total 44 100 100

With the reported tediousness in generating reports which are error prone, again majority of

respondents (61.4%) strongly agreed that the module if developed will increase accuracy in

creating reports. About 36.4% agreed and the rest (2.3%) fell under neutral. Results from

analysis are shown in Table 6.

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Table 6: Responses for integrated Care2x HMIS and TB module will increase accuracy in

creating reports

Valid Criteria Frequency Percent Valid Percent Cumulative Percent

Neutral 1 2.3 2.3 2.3

Agree 16 36.4 36.4 38.6

Strongly Agree 27 61.4 61.4 100.0

Total 44 100 100

Respondents also showed a need to reduce costs by digitization of TB care. 63.6% strongly

agreed that the module will reduce running costs while 34.1% agreed and 2.3% was neutral.

Table 7 summarizes the results.

Table 7: Responses for integrated Care2x HMIS and TB module will reduce running costs

Valid Criteria Frequency Percent Valid Percent Cumulative Percent

Neutral 1 2.3 2.3 2.3

Agree 15 34.1 34.1 36.4

Strongly Agree 28 63.6 63.6 100.0

Total 44 100.0 100.0

Respondents also indicated challenges with the current flow and system. The main reported

challenges by majority of the respondents are unreliable power supply and loss of TB patients’

files due to manual system. Also, the use of a long time in attending TB patients which is

associated with lots of paper work. Other challenges are lack of enough knowledge on

computer use. Furthermore, majority of responding nursing officers reported that the nursing

module in Care2x HMIS lacks some functionalities required for charting patients’ medication

and nurses’ activities, making their work not properly recorded and reported. In addition to

that, one laboratory personnel indicated that the current Care2x HMIS has no room to capture

TB culture results provided weekly by the laboratory.

The field work conducted at KIDH provided the existing situation in care and treatment of TB

patients with paper based system. KIDH being a National designated facility for TB care and

treatment represent majority of other facilities in the country that are in TB care and treatment

programme as well as facilities that use Care2x as their HMIS. The study found that the paper

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based system was inefficient and brings about a lot of challenges. The following chapter section

provides a description of the development of a TB module in Care2x HMIS.

4.3 Developed TB module in Care2x HMIS

The developed module for TB care and treatment in Care2x HMIS maintained the modular

structure of Care2x HMIS. The TB module provides controlled access through login by

providing username and a password. Also a link to access the TB module was added to the

Care2x HMIS main menu but the module can also be accessed by selecting TB clinic through

Outpatient link. Since the security implementation of Care2x HMIS allows login at module

level, a user with privilege to access the module can login directly to TB clinic and access the

TB module by clicking the “TB Care” link on the main menu. Figure 8 presents the login page

to TB Module which opens when a link to access TB module is clicked on the main menu.

Figure 8: The login page for TB Module

Once login is validated and approved, user will be redirected to the module homepage which

provides links to access normal TB and MDR-TB patients registered and admitted to TB care.

Also a link to view patients admitted to TB outpatients’ clinic who are not yet registered to TB

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care and a link to access different TB reports. Figure 9 shows the TB module successful login

homepage.

Figure 9: TB module successful login homepage

All TB patients whose visit is first time to the facility or those who are not yet registered to TB

care and treatment program through the TB module can be registered through the registration

form provided by the module. The basic registration details such as names, date of birth or age,

patient’s file number and address which were initially captured during patient registration will

be made available to TB module and visible on the registration page to TB care. Figure 10

shows the registration of first time patient to TB care.

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Figure 10: Registration of first time patient to TB care

The module also provides an interface for registration of MDR-TB patients and a means to

transfer a normal TB patient to MDR-TB. This form will also display the basic registration

details at the top section. For the case of transferred patient from normal TB to MDR-TB,

details for normal TB registration such as district registration number and the corresponding

registration date will automatically be populated in the form. Figure 11 shows the registration

interface for MDR-TB.

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Figure 11: Registration interface for MDR-TB patient

Other TB data elements that are required such as treatment support, treatment phases and

outcomes, MDR-TB treatment episodes and outcomes and so on are captured through provided

forms in the module. Figure 12 shows a form to capture treatment episodes and outcomes for

MDR-TB patients.

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Figure 12: MDR-TB patient treatment episodes and outcomes

Once a patient is registered to TB care, doctors and medical attendants can access the patient

and record consultations, daily medications as well as other TB data elements through the

module. Figure 13 shows the landing page for the selected registered patient into TB care. This

registered patient if under normal TB, the link to transfer to MDR-TB appears in case the

patient develops resistance to first line drugs.

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Figure 13: Homepage for the selected registered patient into TB care

On recording daily medications (or charting) for TB registered and admitted patients as

required, details for the prescribed drugs with their dosage and doctor’s comments if any will

be automatically fetched from the database. Figure 14 shows an interactive form powered by

Ajax technology for recording daily medications of TB patients currently admitted at the

facility and under direct observation. For home-based care, further development will be

required such as mobile integration to assist care takers chart daily drugs administration.

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Figure 14: Form for taking daily medications of TB patients

4.4 Module Testing

The aim of module testing and validation was to answer the research question “How will the

developed TB module in Care2x MHIS be tested and validated?” Several testing approaches

and techniques were employed during the development of the TB module to ensure that the

user requirements were met as well as standards. Upon implementation of the developed

module, users were involved to validate the module. The following are testing procedures that

were employed in the development and implementation of the TB module in Care2x HMIS.

4.4.1 Unit testing

This is testing at software’s component level to ensure that it works as required before

integrating with other components. In this study, the development of the module employed

testing at each functional level for operability, data validation, response time, usability and

interactivity. In ensuring that users will enter required data, appropriate data types were defined

in the design of database schema. This was supplemented by the user input validation at the

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application level through the use of HTML5 built in validation features in combination with

JavaScript form validation. Cases such as date input are handled by HTML5 by providing a

calendar that forces user to pick rather than typing a date. Fields that are a must be filled are

handled by JavaScript which runs at the client side to reduce response time. Invalid input would

be rejected for fields with defined format such as district registration number, date, numeric

values etc. However, for fields that accept alphanumeric values, anything could be entered. On

the other hand, to ensure the overall response becomes low, the standard response time set for

each component was below 0.5 seconds.

4.4.2 Integration Testing

This refers to testing of the functionalities and behavior of the individual components when

integrated together after passing the unit testing. The components’ behavior upon integrating

together was also tested during and after development. Real patients’ data was used to test for

the behavior and working of the TB module when integrated with other modules in Care2x

HMIS. The module responded well to majority of tests. Some of the test results are presented

in Table 8.

Table 8: Results of TB module integration testing

Integrating Module with TB Module Results

Registration and Admission Passed, registration details were available in TB

module

Doctors Module Passed, the doctors’ module was accessible from the

TB module.

Nursing Care Passed, medications could be charted from the TB

module.

4.4.3 System Testing

This comprises testing of the whole system functionalities. Upon integrating the TB module

into Care2x HMIS, tests were conducted on the overall system to see how the system works

with the integrated module in terms of responsiveness, response time, data exchange with other

modules and the overall activity flow of the system. Some of the tests included admitting

patients to TB clinic and check if they were available in the list, issue prescriptions to TB

patients from the module, requesting for laboratory and radiology tests and access to results

from the TB module and so on. Real patients’ data was used to conduct the tests. It was found

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that, the module worked perfectly well with other modules combined. The overall performance

of the system was not affected by the added TB module.

4.5 Module Validation Testing

To validate the developed TB module in Care2x HMIS, users were also involved in the testing

process. This type of testing focused on getting the users’ perspective and satisfaction on the

developed TB module. It focused on answering the following key questions:

(i) Is the developed TB module interactive?

(ii) Is the developed TB module easy to learn?

(iii) Does the developed TB module align with the requirements?

(iv) Does the developed TB module capture most of the required TB data elements?

To answer the above questions, questionnaires were issued to fifteen (15) health practitioners

in TB care selected randomly at KIDH. Out of the 15 issued questionnaires, 13 were collected

(86.66%) response. Microsoft Office Excel was used to analyze and present the results.

Responses from the questionnaires were based in a scale of 1 – Strongly Agree; 2 – Agree; 3 –

Neutral; 4 – Disagree; 5 – Strongly Disagree. Table 9 presents the summary of the users

responses on validation testing.

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Table 9: Summary of the users’ responses on validation testing

S/No Question/Statement Strongly

Agree

Agree Neutral Disagree Strongly

Disagree

1 The module is interactive 23.08% 53.85% 15.38% 7.69% 0.00%

2 The module is user friendly 30.77% 61.54% 7.69% 0.00% 0.00%

3 The module is comfortable to

use

46.15% 46.15% 7.69% 0.00% 0.00%

4 The module is easy to learn 23.08% 76.92% 0.00% 0.00% 0.00%

5 The module captures most of the

TB data elements

23.08% 53.85% 23.08% 0.00% 0.00%

6 The module aligns with my

requirements

30.77% 46.15% 15.38% 7.69% 0.00%

7 The module has integrated all

the patient’s data in one place

23.08% 53.85% 7.69% 15.38% 0.00%

8 The module provides the

required reports

7.69% 46.15% 15.38% 30.77% 0.00%

9 The patient flow is well

organized in the module

30.77% 61.54% 7.69% 0.00% 0.00%

10 The module reduces paper work 38.46% 61.54% 0.00% 0.00% 0.00%

11 The module increases patients’

TB data correctness

15.38% 53.85% 15.38% 15.38% 0.00%

12 The module improves patients’

TB data completeness

30.77% 69.23% 0.00% 0.00% 0.00%

13 The module improves TB data

handling

38.46% 61.54% 0.00% 0.00% 0.00%

14 The module reduces TB

patients’ attending time

23.08% 69.23% 0.00% 7.69% 0.00%

15 The module improves TB

patients’ treatment monitoring

15.38% 53.85% 23.08% 7.69% 0.00%

16 The module integrates all TB

treatment activities

15.38% 61.54% 7.69% 15.38% 0.00%

17 The module simplifies reports

generation

23.08% 46.15% 23.08% 7.69% 0.00%

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35

Based on the focus of the validation testing, majority of the respondents indicated that the

developed TB module was interactive. Figure 15 presents the results for the statement the

developed TB module is interactive.

Figure 15: Results for the statement the developed TB module is interactive

Further, majority of the respondents indicated that the developed TB module is easy to learn.

Figure 16 presents the results for the developed TB module is easy to learn.

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Figure 16: Results for the developed TB module is easy to learn

Majority of respondents also indicated that the developed TB module aligned with their

requirements. Figure 17 presents the results for the developed TB module aligned with the

requirements.

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Figure 17: Results for the developed TB module aligned with the requirements

Majority of respondents also indicated that the developed TB module captures most of the

required TB data elements. Figure 18 presents the results for the developed TB module captures

most of the required TB data elements.

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Figure 18: Results for the developed TB module captures most of the required data elements

4.6 Results Discussion

From the research case study area, not all interview responses and interview results were

presented. The selected responses presented are those which had contribution to the

development of the TB module or justification of this study. Some of the responses from the

research case study indicated that, several weaknesses existed as well as challenges were

encountered during care and treatment of not just TB patients but all patients. To be specific,

respondents indicated that the paper-based system for recording and reporting TB care and

treatment data at KIDH was associated with lots of weaknesses and challenges. To mention a

few, the weaknesses include:

(i) Low confidentiality and security of patients’ treatment data which are supposed to be

confidential between the patient and care taker, from the doctors’ code of conduct.

(ii) Missing TB data elements that were skipped during the filling of TB cards as there was

no way of enforcing filling of them.

(iii) Isolation of data for TB patients whereby data for TB care and treatment resided in forms

that could easily be lost or damaged while other clinical data resided in Care2x HMIS.

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Some of the challenges that care takers were facing in attending TB patients with paper-based

system of recording and reporting include the following:

(i) The system was time consuming as first, someone must fill the forms by hand and move

around with files from one point to another as patients are not allowed to carry their own

files. Also, to access patient’s information, a doctor or any other care taker needed to

physically find and locate the patient’s file.

(ii) Costs of producing the TB cards and forms that the hospital was incurring increased the

overall running costs of the facility.

(iii) Further, the paper-based system had made it tedious to generate reports as required by

the MoHCDGEC.

Despite literature showing existence of several TB e-health implementations which could

easily be adopted and customized, the focus of this study was to digitize TB care while putting

in to account the issue of data integration which was not addressed in previous studies. The

developed TB module in Care2x addresses digitization of TB care with integration of all

patients’ data. The presented results from the case study area and user validation testing make

it clear that digitization of TB care was essential and will provide a way forward for further

developments.

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CHAPTER FIVE

CONCLUSION AND RECOMMENDATIONS

5.1 Conclusion

The use of e-health systems has become important for quality health care delivery, data

recording and reporting. Health facilities that have implemented e-health HMIS have more

effective and efficient service delivery, with potentially higher productivity, providing

healthcare of greater economic and social value. However, most facilities employing HMIS,

have either a missing digitized TB healthcare delivery module, or are running a separate system

for TB care only or integrated TB care and HIV co-infected patients only. This makes facilities

to run two parallel RR systems which are not integrated nor do they share data leading to

isolation of patients’ TB data from other clinical data. The deployed e-health system at KIDH,

Care2x HMIS, had also most of the generic functions to support clinical care and treatment but

missing a module for TB healthcare delivery, recording and reporting. All the care and

treatment activities for TB patients were paper-based.

The paper-based system for recording and reporting TB care and treatment data at KIDH was

associated with lots of weaknesses and challenges that include: Low confidentiality and

security of patients’ treatment data, missing TB data elements that were skipped during the

filling of TB cards, isolation of data, the system was time consuming, running costs and

problems in reports generation. To overcome the said weaknesses and challenges, this study

sought to introduce the use of ICT in TB care at KIDH by developing and integrating into

Care2x HMIS, a module for TB care and treatment, with an aim of improving management of

TB and eventually improve healthcare delivery to TB patients. This study, through interviews

and review of the existed Care2x HMIS at KIDH, learned and understood the workflow of

activities in TB healthcare delivery together with the architecture, design and functionalities of

the existed HMIS. The collected requirements were used to develop and integrate into Care2x

HMIS, a module for TB care. The developed TB module was successfully integrated into

Care2x HMIS and put into use by the facility. It was found that, more TB patients could be

served in relatively shorter time and activity work-flow run more smoothly. The integrated TB

module in Care2x HMIS moreover, managed to eliminate the isolation which existed between

the TB patients’ data kept in papers and other clinical data that were kept in Care2x HMIS.

Therefore, the developed TB module integrated into Care2x HMIS improved the overall

healthcare delivery to TB patients at KIDH.

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5.2 Recommendations

This study focused on developing solution for digitization of TB care in one facility, however,

it has shown that digitization of TB management is possible. The researcher therefore calls

upon other facilities which do not use ICTs in management of TB to follow. On the other hand,

the study has laid down a framework for further development to provide a national wide

integrated solution for TB management through the use of ICT.

Also, the provided solution by this study focused on a web based module and data storage,

however, the results of this study can be used by other researches as a benchmark for further

development in other areas such as mobile integration for TB care through Unstructured

Supplementary Service Data (USSD) for featured phones and mobile applications for smart

phones. This would go together with the nationwide ICT solution for TB management. Further,

it is also possible to digitize reporting of TB suspected patients for immediate attention and

tests which was not covered in this study.

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APPENDICES

Appendix 1: Questionnaires for Data Collection

Questionnaire for Doctors

1. Names (optional): …………………………………………………………………................

2. Job Function / Title: …………………………………………………………………………

3. Working experience (years): ……...…………………………………………………………

4. Health facility Information

a) Name of Health facility: ...............................................................................................

b) Level of health facility(Please put tick in the box for appropriate level)

Dispensary ☐

Health center ☐

District hospital ☐

Regional Referral Hospital ☐

National Referral Hospital ☐

c) District..........................................................................................................................

d) Region..........................................................................................................................

5. How is the patient flow starting from when a patient arrives at the hospital?

……………………………………………………………………………………………….....

………………………………………………………………………………………………….

6. What other medical and non-medical staff attend the patient thought the entire treatment

process?

…………………………………………………………………………………………………..

..............…………………………………………………………………………………………

7. What paper work is produced or required thought the process of attending a patient?

(registers, charts files, request forms, notes etc) Is it possible to get copies?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

8. What data/information do you gather from patient during consultation?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

9. What tool do you use to record the information in (8) above?

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…………………………………………………………………………………………………

…………………………………………………………………………………………………

10. Is there any standard to be followed in taking consultation notes? (please explain if any)

…………………………………………………………………………………………………

…………………………………………………………………………………………………

11. Are there any time critical procedure or time sensitive procedure to patients that need to be

captured?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

12. What are common diagnosis cases? (and nature of cases)

…………………………………………………………………………………………………

……….…………………………………………………………………………………………

13. What kind of medications or prescriptions do patients receive? Any special cases for TB

patients (please explain)?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

14. What are Government/WHO guidelines for TB treatment?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

15. What is your experience with Care2x System..................................(years/months)

16. What other information systems do you use? And for what purposes?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

17. What types of investigation are done to the patients?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

18. How do you request for investigations and receive results of TB patients? (Lab, Radiology)

…………………………………………………………………………………………………

…………………………………………………………………………………………………

19. What tool do you use to record diagnosis of TB patients?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

20. Can you get a complete patient history with the current system? If not, what do you do?

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…………………………………………………………………………………………………

…………………………………………………………………………………………………

21. How do you handle Emergency cases?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

22. How do you handle treatment of the following TB cases? DOTS TB, DR TB, MDR-TB.

…………………………………………………………………………………………………

…………………………………………………………………………………………………

23. With the current system structure, what improvements do you suggest for it to be able to

handle TB data elements?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

…………………………………………………………………………………………………

24. What types of reports do you generate/produce/need from patients’ TB data?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

25. What are the constraints of the current system? (both manual and electronic systems)

......................................................................................................................................................

......................................................................................................................................................

26. Are there any outreach clinics (if available how are they practiced)?

......................................................................................................................................................

......................................................................................................................................................

27. How do you practice Home Based Care? (if any)

......................................................................................................................................................

......................................................................................................................................................

28. Is there any need for communicating or monitoring TB patient after discharge? How is it

currently done (if any)

......................................................................................................................................................

......................................................................................................................................................

29. How is DHIS-2 used to handle TB data? Does it eliminate paper work?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

30. What diseases other than TB do you deal with?

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…………………………………………………………………………………………………

…………………………………………………………………………………………………

31. What challenges do you face in your current Care2x system with regard to TB care?

......................................................................................................................................................

......................................................................................................................................................

32. Is it necessary for the module to be developed in Care2x? Give reasons if any.

......................................................................................................................................................

......................................................................................................................................................

.

33. Please tick one box to assess the extent to which integrated Care2x and TB module will

Strongly

Disagree

Disagree Neutral Agree Strongly

Agree

a) Reduce paper work

☐ ☐ ☐ ☐ ☐

b) Improve patients’ data

management ☐ ☐ ☐ ☐ ☐

c) Increase accuracy in

creating reports ☐ ☐ ☐ ☐ ☐

d) Reduce running costs ☐ ☐ ☐ ☐ ☐

34. Any wishes, ambitions or desires as an individual?

......................................................................................................................................................

If you have any questions about the study, please feel free to call +255 755 864 209 or

email [email protected]

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Questionnaire for Nurses

1. Names (optional): …………………………………………………………………................

2. Job Function / Title: …………………………………………………………………………

3. Working experience (years): ……...…………………………………………………………

4. Health facility Information

a) Name of Health facility: ................................................................................................

b) District............................................................................................................................

c) Region............................................................................................................................

5. What are the procedures for admitting patients to wards?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

6. What tool do you use to keep the records in (5) above?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

7. What standard practices and procedures are there for inpatient/wards? What is the current

practice?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

8. How is ward round done?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

9. How are Emergency cases handled?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

10. Is there any paper work produced or required thought the processes of TB inpatient

treatment? (registers, charts files, request forms, notes etc) Is it possible to get copies?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

11. What is your experience with Care2x System..................................(years/months)

12. What other information systems do you use?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

13. How do you request for patients’ drugs and supplies? (for inpatient)?

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…………………………………………………………………………………………………

…………………………………………………………………………………………………

14. What tool do you use to record/chart/track patients’ taking of medicine/drugs?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

15. How is the discharge process for inpatient and outpatients handled?

......................................................................................................................................................

......................................................................................................................................................

16. What types of reports do you generate/produce/need from TB patients’ data and how is it

done now?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

17. What are the constraints of the current system? (both manual and electronic systems)

......................................................................................................................................................

......................................................................................................................................................

18. Are there any outreach clinics? If available how are they practiced?

......................................................................................................................................................

......................................................................................................................................................

19. How do you practice Home Based Care? (if any)

......................................................................................................................................................

......................................................................................................................................................

20. Is there any need for communicating or monitoring TB patient after discharge? How is it

currently done (if any)

......................................................................................................................................................

......................................................................................................................................................

21. How is DHIS-2 used to handle TB data? Does it eliminate paper work?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

22. Please tick one box to assess the extent to which integrated Care2x and TB module will

Strongly

Disagree

Disagree Neutral Agree Strongly

Agree

a) Reduce paper work

☐ ☐ ☐ ☐ ☐

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53

b) Improve patients’ data

management ☐ ☐ ☐ ☐ ☐

c) Increase accuracy in

creating reports ☐ ☐ ☐ ☐ ☐

d) Reduce running costs ☐ ☐ ☐ ☐ ☐

23. What challenges do you face in your current Care2x system with regard to TB care?

......................................................................................................................................................

......................................................................................................................................................

24. Do you think it is necessary for the TB module to be developed in Care2x? Give reasons

if any.

......................................................................................................................................................

......................................................................................................................................................

25. Any wishes, ambitions or desires as an individual?

......................................................................................................................................................

......................................................................................................................................................

If you have any questions about the study, please feel free to call +255 755 864 209 or

email [email protected]

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54

Questionnaire for Hospital Administration

1. Names (optional): …………………………………………………………………................

2. Job Title: …………………………………………………………………………………….

3. Working experience (years): ……...…………………………………………………………

4. Health facility Information

a) Name of Health facility: ................................................................................................

b) Level of health facility(Please put tick in the box for appropriate level)

Dispensary ☐

Health center ☐

District hospital ☐

Regional Referral Hospital ☐

National Referral Hospital ☐

c) District.........................................................................................................................

d) Region.........................................................................................................................

5. What are the processes involved in treating a patient in your hospital. How is the

process/workflow/patient flow starting from when a patient arrives at the hospital to

discharging a patient?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

6. Are the processes mentioned in (5) the same for TB patient?

Yes ☐ No ☐

If not the same please describe the process involved in treating TB patient

…………………………………………………………………………………………………

…………………………………………………………………………………………………

7. Which guideline do you use/follow in treating TB patients?

WHO ☐ GOT ☐ Other (specify) ☐

…………………………………………………………………………………………………

…………………………………………………………………………………………………

8. Which medical and non-medical staff attend the patient thought the entire treatment

process?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

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55

9. Are there any billing and insurance, exemptions or social services involved? How are they

handled?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

10. When did your facility start using Care2x System ................................(year/month)

11. How is TB treatment practiced? If you are using computer system, how was the practice

before computers?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

12. What other Information systems does your facility use? For what purposes?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

13. What diseases other than TB does your facility deal with?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

14. Please tick one box to assess the extent to which integrated Care2x system and TB

module will:

Strongly

Disagree

Disagree Neutral Agree Strongly

Agree

a) Reduce paper work

☐ ☐ ☐ ☐ ☐

b) Improve patients’ data

management ☐ ☐ ☐ ☐ ☐

c) Increase accuracy in

creating reports ☐ ☐ ☐ ☐ ☐

d) Reduce running costs ☐ ☐ ☐ ☐ ☐

15. New TB incidences reported at your facility for the years:

Year /

Quarter 2015 2016 2017

First Quarter (Q1)

Second Quarter (Q2)

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56

Third Quarter (Q3)

Fourth Quarter (Q4)

16. Deaths attributed to TB for the years:

Year /

Quarter 2015 2016 2017

First Quarter (Q1)

Second Quarter (Q2)

Third Quarter (Q3)

Fourth Quarter (Q4)

17. What challenges do you face in your current system / approach for TB care/treatment?

......................................................................................................................................................

......................................................................................................................................................

18. Are there any future improvements in patients treatment you are thinking to make (long

term and short term)

......................................................................................................................................................

......................................................................................................................................................

If you have any questions about the study, please feel free to call +255 755 864 209 or

email [email protected]

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57

Questionnaire for Laboratory Scientists and Radiologists

1. Names (optional): …………………………………………………………………................

2. Job Function / Title: …………………………………………………………………………

3. Working experience (years): ……...…………………………………………………………

4. Health facility Information

a) Name of Health facility: ...............................................................................................

b) District...........................................................................................................................

c) Region...........................................................................................................................

5. What are the types of investigation done to the patients

………………………………………………….………………………………………………

………………………………………………………………………………………………….

6. Are there any machines/analyzers involved in investigations? If present, how are results

output? (for each) eg. Dumps xml data, printed, etc.

………………………………………………….………………………………………………

………………………………………………………………………………………………….

7. Is there any paper work produced or required during the investigation process (registers,

charts files, request forms, notes etc) Is it possible to get copies?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

8. What is your experience with Care2x System..................................(years/months)

9. What other Information systems do you use and for what purposes?

………………………………………………….………………………………………………

………………………………………………………………………………………………….

10. How do you receive investigations requests and send results for TB patients? (Any paper

work involved?)

…………………………………………………………………………………………………

…………………………………………………………………………………………………

11. With the current Care2x system structure, what improvements do you suggest for it to be

able to handle TB patients?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

12. What investigations reports do you generate/produce for TB patients? (Can we get sample

reports? )

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58

…………………………………………………………………………………………………

…………………………………………………………………………………………………

13. What diseases other than TB does your facility investigate?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

14. Please tick one box to assess the extent to which integrated Care2x and TB module will

Strongly

Disagree Disagree Neutral Agree

Strongly

Agree

a) Reduce paper work ☐ ☐ ☐ ☐ ☐

b) Improve patients’ data

management ☐ ☐ ☐ ☐ ☐

c) Increase accuracy in

creating reports ☐ ☐ ☐ ☐ ☐

d) Reduce running costs ☐ ☐ ☐ ☐ ☐

15. What are the constraints of the current system? (both manual and electronic systems)

......................................................................................................................................................

......................................................................................................................................................

16. What challenges do you face in your current Care2x system with regard to TB care?

......................................................................................................................................................

......................................................................................................................................................

17. Is it necessary for the module to be developed in Care2x? Give reasons if any.

......................................................................................................................................................

......................................................................................................................................................

18. Any wishes, ambitions or desires as an individual?

......................................................................................................................................................

If you have any questions about the study, please feel free to call +255 755 864 209 or

email [email protected]

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59

Questionnaire for System Administrators

1. Names (optional): …………………………………………………………………................

2. Job Function / Title: …………………………………………………………………………

3. Working experience (years): ……...…………………………………………………………

4. Health facility Information

a) Name of Health facility: ...............................................................................................

b) District...........................................................................................................................

c) Region...........................................................................................................................

5. What is your experience with Care2x System..................................(years/months)

6. What are commonly reported issues to you from the system users? ………………………

…………………………………………………………………………………………………

7. What modules present in care2x are in use? ….…………………………………………….

………………………………………………………………………………………………..…

8. Is there any module which is not in use? If present, why?

…………………………………………………………………………………………………

9. Have you ever worked to customize/improve the system? If yes, what improvements?

…………………………………………………………………………………………………

10. What other systems do you administer?

…………………………………………………………………………………………………

11. What is the position of the facility in terms of infrastructure? (Connectivity/LAN,

hardware, software, ICT literacy?)

......................................................................................................................................................

12. With the current system structure, do you think it can handle TB data elements?

………………………………………………………………………………………………….

13. What improvements would you recommend for the current workflow?

......................................................................................................................................................

14. What challenges do users report in current Care2x system with regard to TB care?

......................................................................................................................................................

15. Any wishes, ambitions or desires as an individual?

......................................................................................................................................................

If you have any questions about the study, please feel free to call +255 755 864 209 or

email [email protected]

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60

Questionnaire for Registry

1. Names (optional): …………………………………………………………………................

2. Job Function / Title: …………………………………………………………………………

3. Working experience (years): ……...…………………………………………………………

4. Health facility Information

a) Name of Health facility: ...............................................................................................

b) District...........................................................................................................................

c) Region...........................................................................................................................

5. How is the process/workflow/patient flow starting from when a patient arrives at the

hospital to discharging a patient? Is it different for TB patients? Please explain.

…………………………………………………………………………………………………

…………………………………………………………………………………………………

6. What tool do you use for registration of TB patients? What data do you need?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

7. How is referral handled inbound and outbound?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

8. How are emergency cases for TB patients handled at registration?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

9. Are there any billing and insurance, exemptions or social services involved? How are they

handled at registration?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

10. How many TB patients’ records exist and how are they kept? (approximate value)

…………………………………………………………………………………………………

…………………………………………………………………………………………………

11. For how long are the records/archives stored (even the manual)

…………………………………………………………………………………………………

…………………………………………………………………………………………………

12. Have there ever been any cases of lost or damaged/destroyed patient’s files? If yes, how

frequent?

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61

…………………………………………………………………………………………………

…………………………………………………………………………………………………

13. How do you handle files for TB care and other clinical data for the same patient?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

14. Do you produce any reports for TB care? If yes, which ones? ……………………………

…………………………………………………………………………………………………

15. Please tick one box to assess the extent to which integrated Care2x and TB module will

Strongly

Disagree

Disagree Neutral Agree Strongly

Agree

a) Reduce paper work ☐ ☐ ☐ ☐ ☐

b) Improve patients’ data

management ☐ ☐ ☐ ☐ ☐

c) Increase accuracy in

creating reports ☐ ☐ ☐ ☐ ☐

d) Reduce running costs ☐ ☐ ☐ ☐ ☐

16. What challenges do you face in your dealing with TB patients’?

......................................................................................................................................................

......................................................................................................................................................

17. Any wishes, ambitions or desires as an individual?

......................................................................................................................................................

......................................................................................................................................................

......................................................................................................................................................

.....................................................................................................................................................

If you have any questions about the study, please feel free to call +255 755 864 209 or

email [email protected]

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62

Appendix 2: User Validation Testing Questionnaire

User Validation Questionnaire

I am Patrick N Mark, a master’s student at The Nelson Mandela African Institution of Science

and Technology (NM-AIST). In my research titled “Tuberculosis E-health Module in Care2x

for Improved Healthcare Delivery at Kibong’oto National TB Facility”, I have developed and

integrated a module for TB care in Care2x.

To evaluate and validate the module, please assist to assess the developed TB module in Care2x

and give your views so that the feedback can be used to improve the module.

1. Names (optional): …………………………………………………………………................

2. Job Function/ Title/ Designation (Please tick one).

Doctor ☐

Nurse ☐

Laboratory Scientist ☐

Radiologist ☐

Pharmacist ☐

Other (Please Specify) ☐ ………………………………………………………….

In the following statements/questions, please choose the best answer on how you feel

about the developed TB module in Care2x based on the following scale:

1 – Strongly Agree; 2 – Agree; 3 – Neutral; 4 – Disagree; 5 – Strongly Disagree.

S/No Question 1 2 3 4 5

3. The module is interactive ☐ ☐ ☐ ☐ ☐

4. The module is user friendly ☐ ☐ ☐ ☐ ☐

5. The module is comfortable to use ☐ ☐ ☐ ☐ ☐

6. The module is easy to learn ☐ ☐ ☐ ☐ ☐

7. The module captures most of the TB data

elements ☐ ☐ ☐ ☐ ☐

8. The module aligns with my requirements ☐ ☐ ☐ ☐ ☐

9. The module has integrated all the patient’s data in

one place ☐ ☐ ☐ ☐ ☐

10. The module provides the required reports ☐ ☐ ☐ ☐ ☐

11. The patient flow is well organized in the module ☐ ☐ ☐ ☐ ☐

12. The module reduces paper work ☐ ☐ ☐ ☐ ☐

13. The module increases patients’ TB data

correctness ☐ ☐ ☐ ☐ ☐

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63

14. The module improves patients’ TB data

completeness ☐ ☐ ☐ ☐ ☐

15. The module improves TB data handling ☐ ☐ ☐ ☐ ☐

16. The module reduces TB patients’ attending time ☐ ☐ ☐ ☐ ☐

17. The module improves TB patients’ treatment

monitoring ☐ ☐ ☐ ☐ ☐

18. The module integrates all TB treatment activities ☐ ☐ ☐ ☐ ☐

19. The module simplifies reports generation ☐ ☐ ☐ ☐ ☐

20. What other features would you like to be added to the developed module?

…………………………………………………………………………………………………

…………………………………………………………………………………………………

…………………………………………………………………………………………………

…………………………………………………………………………………………………

…………………………………………………………………………………………………

…………………………………………………………………………………………………

Thank you for your feedback!

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64

RESEARCH OUTPUTS

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Output 1: Research Paper

Towards Computerization of TB Care at Kibong’oto National TB Hospital in Tanzania

Patrick N Mark, Mussa Ally, Anael Sam

The Nelson Mandela African Institution of Science and Technology,

Tanzania [email protected], [email protected], [email protected]

DOI: 10.20470/jsi.v9i4.353

Abstract: Tuberculosis (TB) continues to pose a global threat that causes millions of deaths globally annually. Several clinical Hospital Management Information Systems (HMIS) have been developed as well as specialized e-health systems to support TB care. However, most lead to isolation of patient’s TB care data from other clinical data. At Kibong’oto Infectious Diseases Hospital (KIDH) in Tanzania, the HMIS named Care2x is also missing a module to support TB care, making the facility to use paper-based system in TB care. This study employed questionnaires, interviews, TB care documentation and Care2x system reviews to get what is required of the TB care computerization at KIDH. Responses from a total of 44 health practitioners and 2 Information Technology (IT) personnel were collected and analyzed. Findings indicate that an integration of all patient’s data with TB care data is essential. This paper therefore, provides a design of a TB module for integrating in the existing Care2x HMIS at KIDH to improve delivery of health care to TB patients with timely and accurate reports generation as per World Health Organization (WHO) specifications. Keywords: E-health, Care2x, TB care, Kibong’oto.

1. Introduction Tuberculosis (TB) is observed to continue to be among the major causes of deaths globally with poorest communities being the most affected. There are millions of new cases and more than a million deaths worldwide yearly attributed to TB. In 2015, 1.8 million deaths and 1.7 million deaths occurred in 2016 (Falzon et al., 2016; WHO, 2018). As per World Health Organization (WHO), TB prevalence is still high in Tanzania with 306 incidences out of 100 000 population as reported in 2015 (WHO, 2017). With proper medication and care, majority of TB cases may get cured (Falzon et al., 2015).

To support the global TB burden, WHO has a strategy to end TB worldwide by 2035, the Stop TB Strategy, which recommends the use of electronic data recording and reporting (R&R) (Perumal and Desai, 2014; Kigozi et al., 2017). WHO believes that information and communication technologies (ICTs) present innovation opportunities to support efforts in TB care and prevention (Falzon et al., 2016). To succeed, this strategy depends much on R&R system used in TB surveillance (Nadol et al., 2008). Many countries run control programs to support this strategy and some have implemented e-health systems to manage information in those programs (Konduri et al., 2017). These systems help to integrate primary care (by which practitioners record routine clinical patients’ data to the systems) with public health practices by analyzing data and producing real time reports and indicators for diseases to public health departments for policies creation and planning (Klompas et al., 2012). WHO defines e-health as use of ICTs to ensure timely provision of correct health information when that information is needed and to the ones needing it, securely and in electronic form, for improved quality and efficiency in healthcare delivery and prevention programs (WHO | eHealth, 2017). Several e-health systems that are clinical in focus have been implemented to transform medical care by increasing the safety, quality, and efficiency in handling patients’ clinical data (Kukafka et al., 2007; Klompas et al., 2012). On the other hand, specialized e-health systems for diseases, which some have national control programs (such as TB) that require more than a generic e-health system have also been developed (Konduri et al., 2017). Tanzania has designated Kibong'oto Infectious Diseases Hospital (KIDH), formally Kibong’oto National TB Hospital (KNTH) to provide care and treatment of TB patients. It became a national TB hospital in 1956 and in 2010 KNTH received approval from the WHO to treat Multi-drug Resistant TB (MDR-TB) patients (stoptb.org, 2014). However, at KIDH, the Hospital Management Information System (HMIS)

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TOWARDS COMPUTERIZATION OF TB CARE AT KIBONG’OTO NATIONAL TB HOSPITAL IN TANZANIA

in use, Care2x, maintains clinical information for patients but does not have a module to support TB care, making TB data for respective patients under TB care to be recorded in special paper forms provided by the Ministry of Health, Community Development, Gender, Elderly and Children (MoHCDGEC). Therefore, this paper focuses on assessing the current situation by analyzing the users’ requirements for computerization of TB care at KIDH.

1.1 HMIS Implementations in Tanzania Care2x HMIS: Care2x is a web-based open source cross platform and modular integrated HMIS which started as a sourceforge project in May 2002, and it was named care 2002 (Bouidi, Idrissi and Rais, 2017). The system is written in PHP, Java, JavaScript runs in Apache web server with MySQL backend database for storing data. It has among other, modules for Registration and Admission, Doctors, Nursing, Laboratory, Radiology, Billing, Pharmacy and Care and Treatment Clinic (CTC) (Care2X.org, 2018). The system being open source, it is being customized to meet the requirements for Tanzania hospitals. The Lutheran Investment Company (LUICo) owned by the Evangelical Lutheran Church in Tanzania (ELCT) is the one currently maintaining and customizing the system in Tanzania (ELCT, 2018). Several other HMIS have been implemented in Tanzania. These include OpenMRS, Government of Tanzania HMIS (GoT-HOMIS), Powerweb's Hospital Management Software, MediPro e-Health and AfyaPro (Tierney et al., 2010). OpenMRS is open source software that was formed in 2004 for developing countries. It is customizable as per health provider needs without knowledge of programming required (Kalogriopoulos et al., 2009). OpenMRS was implemented in 3 sites in Tanzania in the year 2008, the sites being Morogoro Regional Hospital which is a referral hospital in Morogoro region, Tumbi Special Hospital, a district hospital in Coast region and Ocean Road Cancer Institute in Dar Es Salaam. This implementation meant to eliminate paper based HIV-register forms by providing the National AIDS Control Program (NACP) with a database for HIV/AIDS registry (Tierney et al., 2010). On the other hand, GoT-HOMIS which is owned by the Regional Administration and Local Government of the Government of Tanzania has been implemented in over 170 facilities. An overview of this software’s modules shows that it doesn’t have a module for TB care (PO-RALG, 2017). Also, Powerwebs’s HMS is owned by an Information Technology (IT) company operating in Tanzania known as PowerComputers Telecommunications Ltd, thus, not free to customize (Powercomputers, 2017). Furthermore, MediPro e-Health developed by Maxcom Africa PLC is a modular system based on J2EE standard driven architecture and is platform and database independent (Maxcom Africa PLC-Maxmalipo, 2018). AfyaPro is also a HMIS that has core modules of registration, billing, inventory, diagnosis & treatment, laboratory, RCH, in-patient and CTC. The implementation of AfyaPro focused on Lake Zone regions in Tanzania. All these implementations however, do not mention to include integrated module for TB care (Afya Connect for Change, 2015).

1.2 Related Works 1.2.1 E-Health and TB Care in Developed Countries To enhance national TB surveillance, United States of America (USA) implemented in March 2010 a web-based system called TB Genotyping Information Management System (TB GIMS). The system provides online secured database of TB data integrated with genotype results for TB programs at all levels, local and state (Ghosh et al., 2012). A web-based system called Tuberculosis Information Management System (TBIMS) was also implemented in China and started to phase out the paper recording of TB surveillance data in 2005 (Huang et al., 2014). The system however focuses only on TB data recording and reporting. 1.2.2 E-Health and TB Care in Developing Countries Nadol et al., (2008) analyzed three systems, electronic tuberculosis register (ETR.Net), Electronic Nominal TB Registration System (ENRS) and eDOTS which was piloted tested in Uganda, Kenya, Kyrgyzstan, Mexico, Micronesia and Vietnam. ETR.Net was tested in South Africa, Botswana and Tanzania. It is based on Microsoft .Net framework and uses Microsoft Access and SQL server. An evaluation of ETR.Net in Eden District, South Africa, shows that it is simple and acceptable proved success to support the TB control program and reduced the incomplete data problem which existed in TB cards (Mlotshwa et al., 2017). Moreover, ENRS was tested in Egypt, Jordan, Sudan and Syria. It is Microsoft Excel based. The two systems ETR.Net and ENRS do not eliminate the primary patient

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PATRICK N MARK, MUSSA ALLY, ANAEL SAM forms used for maintaining patients’ data at the lowest level. eDOTS however, supports patient-level data entry, data transfer to central computer as well as reports generations at different levels but it is proprietary with associated fees. Its interface is Microsoft Windows based and no communication with the HMIS (Nadol et al., 2008). Furthermore, Fraser et al., (2013) developed OpenMRS-TB, an open source Electronic Medical Records (EMR) system implemented in Peru, Pakistan, Haiti and other areas with resource constraints. The system support MDR-TB data management and is also flexible to support other diseases. In 2012, an android based system named Treatment Information from Basic Unit (TIBU) was deployed in Kenya to replace paper TB data R&R. The system synchronizes data with the national server through local data service providers. The data can be analyzed for reporting then. Despite proving success for TB surveillance in Kenya, the system has focus on TB only and doesn’t solve the problem of patients’ clinical data integration with TB data at facility level (Sharma et al., 2015; Sitienei, 2016). Also, in 2010, Lighthouse Trust and partners developed an EMR system that replaced the paper-based registers for TB and integrated with human immunodeficiency virus (HIV) antiretroviral therapy (ART) EMR at Martin Preuss Centre (MPC) clinic in Malawi (Tweya et al., 2016). The system is open source. It led to improved patient care, however focuses only on the two care services, TB and HIV care (Tweya et al., 2016). Another major implementation of TB e-health system in more than ten countries, funded by USAID is the e-TB Manager. It was done in countries in East, South and West Africa, Central and South Asia, the Caribbean and Latin America. The system integrates all aspects of data in TB control required for TB control programs nationwide (Konduri et al., 2017). Ukraine started to use e-TB Manager in 2009 and is one of the successful implementations nationwide (Konduri, Sawyer and Nizova, 2017). In addition to that, Pellison et al., (2017) in a project called ecosystem explain how tedious it is to organize patients’ information to obtain compete history from different systems and TB data for better treatment strategies. They worked to integrate data in different systems to have a single, complete database that is well organized to provide quality information for TB patients that will be piloted in a state hospital of the São Paulo, Brazil (Pellison et al., 2017). Majority of reviewed implementations indicate isolation of patients’ TB care data from other clinical data. This study therefore focused on providing a solution that will computerize TB care while focusing on integrating all patients’ data.

2. Materials and Methods

2.1 The Research Study Area This research selected KIDH located at 3°11'46.3"S 37°06'21.0"E coordinates in Siha district of Kilimanjaro Region, Tanzania. The targeted group was health services providers for TB patients.

2.2 Sampling In conducting this study, purposive sampling was used to select KIDH since it is the facility specialized in TB care and designated to treat TB in the country. The facility has a total 250 employees, clinical and non-clinical. The numbers are as shown in Table 1. Table 1: Number of Employees at Kibong'oto National TB Hospital as of May 2018

Title Count Title Count

Doctors 21 Laboratory Personnel 11

Nurses 65 Radiologists 2

Medical Attendants 110 Pharmacists 5

IT personnel 2 Others 34

Total 250

From different employees’ groups as shown in Table 1, stratified sampling was employed to get participants from different strata based on profession. On each stratum, representatives were selected randomly of which each had an equal chance. The selected representatives comprised of 12 doctors, 26 nurses, 3 laboratory personnel, 1 radiologist, 2 pharmacists and 2 IT personnel.

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TOWARDS COMPUTERIZATION OF TB CARE AT KIBONG’OTO NATIONAL TB HOSPITAL IN TANZANIA

2.3 Data Collection Methods Collection of data from the study area was conducted in May 2018. The tools and techniques employed in the collection of data were questionnaires, interviews as well as documents and Care2x system review. The tools and techniques are described below: Questionnaires: The selected representatives were issued questionnaires with questions based on their profession, and some general questions to all. Questions focused on the current situation, the workflow of activities in TB patients’ care with the associated tools, challenges faced on care giving and suggestions on what can be done. Interviews: Some of the selected representatives along with filling the questionnaires, were also interviewed. Each stratum had at least one representative. The interviews focused on getting clarity on some medical terms and procedures involved in TB patients’ care that require computerization. Documents Review: Documentary analysis was done on all the provided paper work involved in TB care and treatment. The objective was to get all the required TB data elements that needed to be captured for computerization, and the associated required reports. Care2x HMIS Review: A review of the existing Care2x system was done which focused on understanding the system architecture, design and functionalities.

2.4 Data Analysis Qualitative and quantitative methods were both employed in this study to get what is required of the TB care computerization at KIDH. In analyzing quantitative results, the Statistical Package for the Social Sciences (SPSS) was used.

3. Results

3.1 Qualitative and Quantitative Results All 46 questionnaires issued were filled by the participants (100% response). It was clear from the responses that the patient flow of TB patients is not different from other patients. The flow starts from registration then to consultation rooms, laboratory (if tests are requested), and pharmacy and then discharged. If a patient is admitted to Inpatient Department (IPD), he/she will be allocated to ward. After treatment, a patient will be discharged. Majority of respondents provided an understanding of the same workflow. In attending TB patients, the following paper works are produced which need computerization: Patient TB register, patient file, patient laboratory request form, laboratory registers, patients’ monitoring sheet/treatment card and adverse drug effects. All respondents (100%) indicated a need for the computerization of TB care. The main reason given by majority of respondents was to simplify data capturing and retrieving/reporting and to reduce paper works. One doctor responded “I want to be able to get different reports from the system that are linked to TB care. For example, TB patients who are also on antiretroviral therapy (ART) or patients with TB and diabetes, or patients on TB care who suffered a certain drug reaction etc. and the like by age, sex and so on without a need to analyze one treatment card after another”. Another responding doctor further added that, ‘some people are on TB care but their data are missing….cannot be found anywhere’. In addition to that, majority of the respondents showed a need for a TB module to be developed and integrated in Care2x rather than having a separate system for TB care. Also, to access users’ view on the importance of the module, health practitioners were asked to assess the extent to which integrated Care2x and TB module will reduce paper work, improve patients’ data management, increase accuracy in creating reports and reduce running costs. The criteria for assessment was based on the scale of strongly disagree, disagree, neutral, agree, and strongly agree. Majority of respondents (50%) strongly agreed that the module will reduce paper work whereas (38.6%) of them agreed and the rest (11.4%) were neutral. Table 2 shows the results.

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Table 2: Responses for integrated Care2x system and TB module will reduce paper work On improvement of patients’ data management, 56.8% of the respondents strongly agreed and 43.2% agreed while none was neutral nor disagreed as shown in Table 3. Table 3: Responses for integrated Care2x system and TB module will improve patient's data management

With the reported tediousness in generating reports which are error prone, again majority of the respondents (61.4%) strongly agreed that the module if developed will increase accuracy in creating reports. 36.4% agreed and the rest (2.3%) fell under neutral. Results from analysis are shown in Table 4. Table 4: Responses for integrated Care2x system and TB module will increase accuracy in creating reports Respondents also showed a need to reduce costs by computerization of TB care. 63.6% strongly agreed that the module will reduce running costs while 34.1% agreed and 2.3% was neutral. Table 5 summarizes the results. Table 5: Responses for integrated Care2x system and TB module will reduce running costs

Respondents also indicated challenges with the current flow and system. The main reported challenges by majority of the respondents are unreliable power supply and loss of TB patients’ files due to manual system. Also, the use of a long time in attending TB patients which is associated with lots of paper work. Other challenges are lack of enough knowledge on computer use. Furthermore, 22 JOURNAL OF SYSTEMS INTEGRATION 2018/4

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majority of responding nursing officers reported that the nursing module in Care2x system lacks some functionalities required for charting patients’ medication and nurses’ activities, making their work not properly recorded and reported. In addition to that, one laboratory personnel indicated the current Care2x system has no room to capture TB culture results provided weekly by the laboratory.

3.2 Proposed Module Design 3.2.1 Conceptual Design After analysis of both primary and secondary data, a framework for the TB module development and integration in Care2x was developed as shown in Figure 1.

Figure 1: TB module development framework. On the other hand, the main system Care2x already has its categories of users. The categories of users who will have access to the module are all care providers with assigned respective privileges. However, the privileges will be dynamically allocated for the module as per Care2x HMIS security approach. Figure 2 shows the proposed classes of users:

Figure 2: Use cases diagram for the initial design of a TB module in Care2x JOURNAL OF SYSTEMS INTEGRATION 2018/4 23

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3.2.2 Patients Workflow Once the registration and admission send the patient to TB clinic/department in the main system, the list of patients in TB clinic gets updated and a user of the module can then access the patient from the module. The patient, if is first time visit, provides additional information which is recorded via the module. Figure 3 describes the designed patient flow with integrated TB module in Care2x that will not affect the existing flow.

Figure 3: Proposed patients flow with integrated TB Module in Care2x

After accessing the patient through the module, the user fills in all other required clinical and progress information for the respective patient’s visit. The user, most likely a doctor can issue prescriptions, set appointments and others from the TB module through linked respective modules. The required TB reports can then be generated from the Care2x system. 3.2.3 Database Design To capture all the required TB data elements via a TB module, twenty-five (25) new tables have been added to Care2x database and four existing tables modified by adding new columns. The modified tables carry data about patients’ visits, prescriptions, test requests and findings. Figure 4 describes the tables’ relationships in an enhanced entity relationship (EER) model for the integrated TB module. 24 JOURNAL OF SYSTEMS INTEGRATION 2018/4

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Figure 4: EER diagram for an integrated TB module in Care2x

3.3 Constraints Since the system and the module are web based, following constraints apply on the operability of the

module:

a) Local Area Network (LAN) and Internet: for the user to access the system and module, he/she

will need a connection to the server which can be a local server via LAN or an online server via internet for remote connection.

b) Web Browser: The client computer/device will need a browser to access the system.

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3.4 Assumptions and Dependencies One assumption about the module is that it will not be able to operate on its own but will always use data from registration/admission module and data from other modules. The architecture of TB module will be based on the architecture of Care2x HMIS. The programming language that will be used is PHP, with HTML5, JavaScript and CSS. For interface design, Bootstrap will be employed to support mobile devices with low resolution. The care2x supported database server is MySQL, thus the module is also designed on the same.

4. Discussion and Future Perspectives Health practitioners at KIDH showed a strong need for integration of patients’ TB data with their corresponding other clinical data. Our aim is to computerize the TB care while having all the patients’ data in one place. Despite several challenges, many respondents indicated that Care2x system has been helpful to the hospital. Therefore, it is suggested that a module be developed and integrated in Care2x. An evaluation study on the developed module will need also be conducted. Furthermore, a mobile integration for TB care provision is invited to support home-based care and easing data collection on outreach clinics. Also, patients can be reminded of taking their medications, following their appointments and a lot more with this integration.

4.1 Limitations The first limitation of this study is that it is focused on one health facility only. However, it is assumed that, since KIDH is a National designated facility for TB care, and the guidelines provided by the WHO and the ministry apply to all facilities, the results of this study can be applied to several other facilities that run Care2x HMIS in the country. Another limitation is the length of questionnaires, especially the questionnaire for doctors which required many qualitative responses that led to some respondents to leave some questions unanswered.

5. Conclusion Despite many implementations of generic e-health systems and systems to support TB care, it is observed that the systems are independent. Literature suggests that most TB e-health systems are purposely designed for TB surveillance only. However, findings of this study indicate that, an integration of all clinical and program specific patients’ data is essential to maintain quality and complete data. This study has therefore provided a design of an integrated module in Care2x HMIS to enhance integration of patients’ data, improve delivery of health care to TB patients as well as timely and accurate reports generation as per WHO specifications.

References Afya Connect for Change, 2015: AfyaPro. Available at: http://afyac4c.org/afyapro.html (Accessed: August 17, 2018). Bouidi, Y., Idrissi, M. A. and Rais, N., 2017: “Adopting An Open Source Hospital Information System To Manage Healthcare Institutions,” LIFE: International Journal of Health and Life-Sciences, 3(3), pp. 38–57 Care2X.org, 2018: Care2X - Features. Care2X.org. Available at: http://www.care2x.org/node/25 (Accessed: August 14, 2018) ELCT, 2018: Care2x Software. Available at: http://health.elct.org/projects/information-and- communication-technology/care2x-software.html (Accessed: August 14, 2018) Falzon, D. et al., 2015: “The role of eHealth and mHealth in tuberculosis and tobacco control: A WHO/ERS consultation,” European Respiratory Journal, 46(2), pp. 307–311, doi: 10.1183/09031936.00043315. Falzon, D. et al,. 2016: “Digital health technology for the end TB strategy: Developing priority products and making them work,” European Respiratory Journal, 48(suppl 60).

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Fraser, H. S. F. et al., 2013: “E-Health Systems for Management of MDR-TB in Resource-Poor Environments : A Decade of Experience and Recommendations for Future Work.”, doi: 10.3233/978-1-61499-289-9-627 Ghosh, S. et al., 2012: “Tuberculosis Genotyping Information Management System: Enhancing Tuberculosis Surveillance in the United States,” Infection, Genetics and Evolution. Elsevier B.V., 12(4), pp. 782–788. doi: 10.1016/j.meegid.2011.10.013. Huang, F. et al., 2014: “Electronic recording and reporting system for tuberculosis in China: experience and opportunities,” Journal of the American Medical Informatics Association, 21(5), pp. 938–941. doi: 10.1136/amiajnl-2013-002001 Kalogriopoulos, N. A. et al., 2009: “Electronic Medical Record Systems for Developing Countries: Review.” https://ewh.slc.engr.wisc.edu/publications/conferences/2009/ Kigozi, G. et al., 2017: “Factors influencing treatment default among tuberculosis patients in a high burden province of South Africa,” International Journal of Infectious Diseases. The Author(s), 54, pp. 95–102. doi: 10.1016/j.ijid.2016.11.407. Klompas, M. et al., 2012: “Integrating clinical practice and public health surveillance using electronic medical record systems,” American Journal of Preventive Medicine. Elsevier Inc., 42(6 SUPPL. 2), pp. S154–S162. doi: 10.1016/j.amepre.2012.04.005 Konduri, N. et al., 2017: “User experience analysis of an eHealth system for tuberculosis in resource- constrained settings : A nine-country comparison,” International Journal of Medical Informatics. Elsevier Ireland Ltd, 102, pp. 118–129. doi: 10.1016/j.ijmedinf.2017.03.017 Konduri, N., Sawyer, K. and Nizova, N., 2017: “User experience analysis of e-TB Manager, a nationwide electronic tuberculosis recording and reporting system in Ukraine.,” ERJ open research. European Respiratory Society, 3(2), pp. 00002-2017. doi: 10.1183/23120541.00002-2017 Kukafka, R. et al., 2007: “Redesigning electronic health record systems to support public health,” Journal of Biomedical Informatics, 40(2007), pp. 398–409. doi: 10.1016/j.jbi.2007.07.001 Maxcom Africa PLC- Maxmalipo, 2018: Fully Integrated Hospital Management Information System – Maxcom Africa PLC- Maxmalipo. Available at: https://maxcomafrica.com/fully-integrated-hospital- management-information-system/ (Accessed: August 17, 2018). Mlotshwa, M. et al., 2017: “Evaluating the electronic tuberculosis register surveillance system in Eden District, Western Cape, South Africa, 2015,” Global Health Action. Taylor & Francis, 10(1), p. 1360560. doi: 10.1080/16549716.2017.1360560 Nadol, P. et al., 2008: “Electronic tuberculosis surveillance systems : A tool for managing today’s TB programs,” INT J TUBERC LUNG DIS 12(3):S8–S16 (April 2008) Pellison, F. C. et al., 2017: “Development and evaluation of an interoperable system based on the semantic web to enhance the management of patients’ tuberculosis data,” Procedia Computer Science. Elsevier B.V., 121, pp. 791–796. doi: 10.1016/j.procs.2017.11.102. Perumal, R. and Desai, H., 2014: “The role of process analysis and expert consultation in implementing an electronic medical record solution for multidrug-resistant tuberculosis,” South African Journal of Information Management, 16(1), pp. 1–8. doi: 10.4102/sajim.v16i1.617 PO-RALG (2017) “GoT HOMIS V3 User Manual,” pp. 5–7 Powercomputers, 2017: Hospital Management Software in Tanzania. Available at: http://www.powerwebtz.com/hospital-management-software.php (Accessed: November 22, 2017) Sharma, A. et al., 2015: “A review of data quality of an electronic tuberculosis surveillance system for case-based reporting in Kenya: Table 1,” The European Journal of Public Health, 25(6), pp. 1095–1097. doi: 10.1093/eurpub/ckv092 Sitienei, J., 2016: Kenya’s adoption of an electronic tuberculosis surveillance system | AMR Control. Available at: http://resistancecontrol.info/2016/amr-and-tuberculosis/kenyas-adoption-of-an-electronic- tuberculosis-surveillance-system/ (Accessed: November 2, 2017) stoptb.org, 2014: Stop TB Partnership. Available at: http://www.stoptb.org/partners/partner_profile2.asp?PID=70034 (Accessed: April 21, 2018).

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Tierney, W. M. et al., 2010: “Experience implementing electronic health records in three East African countries,” Studies in Health Technology and Informatics, 160(PART 1), pp. 371–375. doi: 10.3233/978-1-60750-588-4-371 Tweya, H. et al., 2016: “Developing a point-of-care electronic medical record system for TB/HIV co- infected patients: Experiences from Lighthouse Trust, Lilongwe, Malawi,” BMC Research Notes. BioMed Central, 9(1), pp. 1–10. doi: 10.1186/s13104-016-1943-4 WHO, 2017: Incidence of tuberculosis (per 100 000 people) | Data. Available at: http://data.worldbank.org/indicator/SH.TBS.INCD?page=6 (Accessed: May 2, 2017). WHO, 2018: WHO | Tuberculosis, WHO. World Health Organization. Available at: http://www.who.int/mediacentre/factsheets/fs104/en/ (Accessed: April 22, 2018) WHO | eHealth, 2017: WHO | eHealth, Who. World Health Organization. Available at: http://www.who.int/ehealth/en/ (Accessed: May 1, 2017)

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Output 2: Manuscript

Digitization of TB Care at Kibong’oto Infectious Diseases Hospital in

Tanzania

Patrick N Mark, Mussa Ally, Anael Sam

The Nelson Mandela African Institution of Science and Technology, Tanzania

[email protected], [email protected], [email protected]

Abstract

Tuberculosis (TB) continues to be a global cause of millions of deaths yearly. The World

Health Organization (WHO) believes that TB can completely be eliminated with proper

treatment and monitoring tools and systems in place and it recommends the use of Electronic

Medical Recording (EMR) systems to support data managements in care and treatment of TB

patients. At Kibong’oto Infectious Diseases Hospital (KIDH), formerly Kibong’oto National

TB Hospital (KNTH) in Tanzania, management of TB care and treatment data used a paper-

based system. Therefore, this study aimed to improve TB care at KIDH through

computerization of TB care and treatment data handling in accordance with the WHO

recommendations, the Stop TB strategy and the Ministry of Health, Community Development,

Gender, Elderly and Children (MoHCDGEC). To accomplish the aim, agile methodology for

systems development was employed to develop, integrate and test a module in the existed

Care2x Hospital Management Information System (HMIS) at KIDH. To validate the developed

module, questionnaires were issued to fifteen (15) health practitioners in TB care selected

randomly at KIDH. Majority of the respondents indicated that the developed TB module was

interactive, easy to learn, aligned with their requirements and captures most of the TB data

elements. Thus, the developed TB module in Care2x HMIS generally improved overall TB

patients care and treatment.

Keywords: Care2x, TB Care Computerization, Kibong’oto, EMRS.

Introduction

Tuberculosis (TB) continues to be a global cause of millions of deaths (Agyeman & Ofori-

Asenso, 2017; Sandhu, 2011; Sulis, Roggi, Matteelli, & Raviglione, 2014). The World Health

Organization (WHO) believes that TB can completely be eliminated with proper treatment and

monitoring tools and systems in place and it recommends the use of Electronic Medical

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Recording (EMR) systems to support data managements in care and treatment of TB patients.

The use of e-health systems has become important for quality health care delivery, data

recording and reporting (Bouidi, Idrissi, & Rais, 2017). Health facilities that have implemented

Hospital Management Information Systems (HMIS) have more effective and efficient service

delivery, with potentially higher productivity, providing healthcare of greater economic and

social value. However, most facilities employing HMIS, have either a missing computerized

Tuberculosis (TB) healthcare delivery module, or are running a separate system for TB care

only or integrated TB care and HIV co-infected patients only (Falzon et al., 2017; Fraser et al.,

2013; Huang et al., 2014; Mlotshwa, Smit, Williams, Reddy, & Medina-Marino, 2017). This

makes facilities to run two parallel Recording and Reporting (R&R) systems which are not

integrated, nor share data, leading to isolation of patients’ TB data from other clinical data. The

deployed e-health system at Kibong’oto Infectious Diseases Hospital (KIDH), Care2x HMIS,

had also most of the generic functions to support clinical care and treatment but missed a

module for TB healthcare delivery, recording and reporting. All the care and treatment

activities for TB patients were paper-based.

The paper-based system for recording and reporting TB care and treatment data at KIDH was

associated with lots of weaknesses and challenges. To mention a few, the weaknesses included:

(i) Low confidentiality and security of patients’ treatment data which are supposed to be

confidential between the patient and care taker, from the doctors’ code of conduct.

(ii) Missing TB data elements that were skipped during the filling of TB cards as there was

no way of enforcing filling of them.

(iii) Isolation of data for TB patients whereby data for TB care and treatment resided in

forms that could easily be lost or damaged while other clinical data resided in Care2x

HMIS.

Some of the challenges that care takers were facing in attending TB patients with paper-based

system of recording and reporting included the following:

(i) The system was time consuming as first, someone must fill the forms by hand and move

around with files from one point to another as patients are not allowed to carry their

own files. Also, to access patient’s information, a doctor or any other care taker needed

to physically find and locate the patient’s file.

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(ii) Costs of producing the TB cards and forms that the hospital was incurring increased the

overall running costs of the facility.

(iii) Further, the paper-based system had made it tedious to generate reports as required by

the Ministry of Health, Community Development, Gender, Elderly and Children

(MoHCDGEC).

To overcome the said weaknesses and challenges, this study sought to computerize the TB care

at KIDH by developing and integrating into Care2x HMIS, a module for TB care and treatment,

with an aim of eliminating paper work and improving healthcare delivery to TB patients.

Materials and Methods

Methodology

This study employed agile methodology to develop the TB module in Care2x HMIS. Agile

methodology combines iterative and incremental processes that are repeated over and over until

customer satisfaction is reached. It follows the principles to satisfy customer, welcome

changes, deliver working product often and other principles (Eason, 2016).

Care2x HMIS

Care2x HMIS is a web-based open source cross platform and modular integrated HMIS that

started as a sourceforge project in May 2002, and it was named care 2002 (Bouidi et al., 2017).

The system is written in PHP, Java, and JavaScript and runs in Apache web server with MySQL

backend database for storing data. It has among other, modules for Registration and Admission,

Doctors, Nursing, Laboratory, Radiology, Billing, Pharmacy and Care and Treatment Clinic

(CTC) (Care2X.org, 2018). The system being open source, it is being customized to meet the

requirements for Tanzania hospitals. The Lutheran Investment Company (LUICo) owned by

the Evangelical Lutheran Church in Tanzania (ELCT) is the one currently maintaining and

customizing the system in Tanzania (ELCT, 2018).

Tools and Technologies

The development of the TB module employed different web technologies, programming

languages as well as other development support tools. The tools are as follows: Hypertext Pre-

Processor (PHP) programming language, Hypertext Markup Language version 5 (HTML5) for

interface development, JavaScript Scripting Language for improved interactivity, Cascading

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Style Sheets (CSS) to format interfaces, Apache web server, MySQL database server, MySQL

workbench and NetBeans Integrated Development Environment (IDE).

Module Testing and Validation

The aim of module testing and validation was to answer the research question “Did the

developed TB module meet the hospital requirements? How?” Several testing approaches and

techniques were employed during the development of the TB module to ensure that the user

requirements were met as well as standards. Upon implementation of the developed module,

users were involved to validate the module. The following are testing procedures that were

employed in the development and implementation of the TB module in Care2x HMIS.

Unit testing

This is testing at software’s component level to ensure that it works as required before

integrating with other components. In this study, the development of the module employed

testing at each functional level for operability, data validation, response time, usability and

interactivity. To ensure the overall response becomes low, the standard response time set for

each component was below 0.5 seconds.

Integration Testing

This refers to testing of the functionalities and behavior of the individual components when

integrated together after passing the unit testing. The components’ behavior upon integrating

together was also tested during development. The module was also tested to see how it responds

when integrated into the parent Care2x HMIS.

System Testing

This comprises testing of the whole system functionalities. Upon integrating the TB module

into Care2x HMIS, tests were conducted on the overall system to see how the system works

with the integrated module in terms of responsiveness, response time, data exchange with other

modules and the overall activity flow of the system.

User Validation Testing

Users were also involved in the testing of the developed module. This type of testing focused

on getting the users’ perspective and satisfaction on the developed TB module. It focused on

answering the following key questions:

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(i) Is the developed TB module interactive?

(ii) Is the developed TB module easy to learn?

(iii) Does the developed TB module align with the requirements?

(iv) Does the developed TB module capture most of the required TB data elements?

To answer the above questions, questionnaires were issued to fifteen (15) health practitioners

in TB care selected randomly at KIDH.

Results

Data Flow Diagram

Data Flow Diagrams (DFDs) are tools to present program design by illustrating how data flows

in a system that have replaced flowcharts and pseudo codes (Aleryani, 2016; Le Vie, 2000).

Data flow diagrams show the manipulation of input through a system process and its output.

Different levels of DFDs are used to present system design that include level 0 or context

diagram, level 1 and level 2 DFDs. This study uses context diagram and DFD level 1 to present

the flow of data in the integrated TB module with Care2x HMIS.

Context Diagram

The external entities interaction with the system is presented by the context diagram. Figure 1

shows the context diagram for the TB module in Care2x HMIS.

Figure 1: Context diagram for the TB module in Care2x HMIS

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Level 1 Data Flow Diagram

Level 1 DFD presents a decomposed context diagram system process into sub-processes that

are connected by data flow and data store. Figure 2 shows level 1 DFD for the TB module in

Care2x HMIS.

Figure 2: Level 1 DFD for the TB module in Care2x HMIS

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Database Schema

Figure 3 describes the logical database design for the integrated TB module in Care2x HMIS.

Figure 3: Logical database design for the integrated TB module in Care2x HMIS

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Module Development Results

The developed module for TB care and treatment in Care2x HMIS maintained the modular

structure of Care2x HMIS. The TB module provides controlled access through login by

providing username and a password. Also a link to access the TB module was added to the

Care2x HMIS main menu but the module can also be accessed by selecting TB clinic through

Outpatient link. Figure 4 presents the login page to TB Module with a link to access TB module.

Figure 4: The login page to TB Module

Once login is validated and approved, user will be redirected to the module homepage which

provides links to access normal TB and MDR-TB patients registered and admitted to TB care.

Also a link to view patients admitted to TB outpatients’ clinic who are not yet registered to TB

care and a link to access different TB reports. Figure 5 shows the TB module successful login

homepage.

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Figure 5: TB module successful login homepage

All TB patients whose visit is first time to the facility or those who are not yet registered to TB

care and treatment program through the TB module can be registered through the registration

form provided by the module. Figure 6 shows the registration of first time patient to TB care.

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Figure 6: Registration of first time patient to TB care

The module also provides an interface for registration of MDR-TB patients and a means to

transfer a normal TB patient to MDR-TB. Figure 7 shows the registration interface for MDR-

TB.

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Figure 7: Registration interface for MDR-TB patient

Other TB data elements that are required such as treatment support, treatment phases and

outcomes, MDR-TB treatment episodes and outcomes and so on are captured through provided

forms in the module. Figure 8 shows a form to capture treatment episodes and outcomes for

MDR-TB patients.

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Figure 8: MDR-TB patient treatment episodes and outcomes

Once a patient is registered to TB care, doctors and medical attendants can access the patient

and record consultations, daily medications as well as other TB data elements through the

module. Figure 9 shows the landing page for the selected registered patient into TB care. This

registered patient if under normal TB, the link to transfer to MDR-TB appears in case the

patient develops resistance to first line drugs.

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Figure 9: Homepage for the selected registered patient into TB care

On taking daily medications (or charting) for TB registered and admitted patients, details for

the prescribed drugs with their dosage and doctor’s comments if any will be automatically

fetched from the database. Figure 10 shows an interactive form powered by Ajax technology

for taking daily medications of TB patients.

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Figure 10: Form for taking daily medications of TB patients

User Validation Testing Results

Out of the 15 issued questionnaires, 13 were collected (86.66%) response. Microsoft Office

Excel was used to analyze and present the results. Responses from the questionnaires were

based in a scale of 1 – Strongly Agree; 2 – Agree; 3 – Neutral; 4 – Disagree; 5 – Strongly

Disagree.

Table 1 presents the summary of the users responses on validation testing.

Table 1: Summary of the users responses on validation testing

S/No Question/Statement Strongly

Agree

Agree Neutral Disagree Strongly

Disagree

1 The module is interactive 23.08% 53.85% 15.38% 7.69% 0.00%

2 The module is user friendly 30.77% 61.54% 7.69% 0.00% 0.00%

3 The module is comfortable to

use

46.15% 46.15% 7.69% 0.00% 0.00%

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S/No Question/Statement Strongly

Agree

Agree Neutral Disagree Strongly

Disagree

4 The module is easy to learn 23.08% 76.92% 0.00% 0.00% 0.00%

5 The module captures most of the TB data elements

23.08% 53.85% 23.08% 0.00% 0.00%

6 The module aligns with my requirements

30.77% 46.15% 15.38% 7.69% 0.00%

7 The module has integrated all the

patient’s data in one place

23.08% 53.85% 7.69% 15.38% 0.00%

8 The module provides the

required reports

7.69% 46.15% 15.38% 30.77% 0.00%

9 The patient flow is well

organized in the module

30.77% 61.54% 7.69% 0.00% 0.00%

10 The module reduces paper work 38.46% 61.54% 0.00% 0.00% 0.00%

11 The module increases patients’

TB data correctness

15.38% 53.85% 15.38% 15.38% 0.00%

12 The module improves patients’

TB data completeness

30.77% 69.23% 0.00% 0.00% 0.00%

13 The module improves TB data

handling

38.46% 61.54% 0.00% 0.00% 0.00%

14 The module reduces TB patients’

attending time

23.08% 69.23% 0.00% 7.69% 0.00%

15 The module improves TB

patients’ treatment monitoring

15.38% 53.85% 23.08% 7.69% 0.00%

16 The module integrates all TB

treatment activities

15.38% 61.54% 7.69% 15.38% 0.00%

17 The module simplifies reports

generation

23.08% 46.15% 23.08% 7.69% 0.00%

Based on the focus of the validation testing, majority of the respondents indicated that the

developed TB module was interactive. Figure 11 presents the results for the statement the

developed TB module is interactive.

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Figure 11: Results for the statement the developed TB module is interactive

Further, majority of the respondents indicated that the developed TB module is easy to learn.

Figure 12 presents the results for the developed TB module is easy to learn.

Figure 12: Results for the developed TB module is easy to learn

Majority of respondents also indicated that the developed TB module aligned with their

requirements. Figure 13 presents the results for the developed TB module aligned with the

requirements.

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Figure 13: Results for the developed TB module aligned with the requirements

Majority of respondents also indicated that the developed TB module captures most of the

required TB data elements. Figure 14 presents the results for the developed TB module captures

most of the required TB data elements.

Figure 14: Results for the developed TB module captures most of the required TB data elements

Discussion and Conclusion

The main contribution of this research work points directly to the improvement of healthcare

delivery to TB patients at KIDH. The implementation of the developed TB module in Care2x

HMIS has contributed to improve healthcare delivery at KIDH to TB patients through

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elimination of paper work, improved TB data management and handling, reduced reports

generating time as well as cost effectiveness. The use of the integrated TB module in Care2x

HMIS will also solve the problem of isolation of patient’s data by running two parallel systems,

therefore, with the developed solution, all patient’s data will be integrated in one place.

Further, since Care2x HMIS is an open source software, the source codes have been shared to

the open source community which can thus be used freely to bring change in the open source

community as well as shared knowledge.

The research work has also contributed to the academic community through the research paper

titled “Towards Computerization of TB Care at Kibong’oto National TB Hospital in Tanzania”

submitted to the Journal of Systems Integration. The research paper presents the existed TB

Care practices at KIDH, related computerization of TB care in developed and in developing

countries and the proposed solution for computerization of TB care at KIDH.

It was found that, with the developed TB module in Care2x HMIS, more TB patients could be

served in relatively shorter time and activity work-flow run more smoothly. The integrated TB

module in Care2x HMIS moreover, managed to eliminate the isolation which existed between

the TB patients’ data kept in papers and other clinical data that were kept in Care2x HMIS.

Therefore, the developed TB module integrated into Care2x HMIS improved the overall

healthcare delivery to TB patients at KIDH.

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