The construction of a crop wild relatives database for the UK
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Transcript of The construction of a crop wild relatives database for the UK
The construction of a crop wild relatives database for the UK
Presentation for PGR-ForumMenorca, 21 April 2004
Maria Scholten, Nigel Maxted, Brian Ford-Lloyd, Chris Baggott, Shelagh Kell
University of Birmingham
The construction of a crop wild relatives database for the UK
Terms of reference:
National Inventory of UK PGR (Department of Food, Environment and Rural Affairs) for crop wild relatives and landraces
At School of Biosciences, University of Birmingham
Agriculture and Food uses
Procedure
Starting point: the PGR-Forum first match of Mansfeld’s with Euro+Med database, filtered on UK distribution
Harmonisation of European and UK taxonomies (UK taxonomy = National Flora (Stace 1997)
Check with UK ethnobotanical literature on uses
Collate occurrence data from botanical surveys (UK occurrence data = New Atlas 2002)
Collate conservation data
Database structure: two taxonomies
Crop Wild Relatives Euro+Med+MDB-genus
Euro+Med+MDB-species
Euro+Med+MDB-subspecies
Family ISOStace-genus
Stace_species
Stace_subsp
Avena fatua Poaceae GBR Avena fatua
Avena sterilis subsp. ludoviciana
Poaceae GBR Avena sterilis subsp. ludoviciana
Avena sterilis subsp. sterilis Poaceae GBR Avena sterilis subsp. sterilis
Avena sterilis Poaceae GBR Avena sterilis
Avena strigosa Poaceae GBR Avena strigosa
Database structure: two taxonomies in order to retain synonyms
EURGENUS EURSPECIES EURSUBTAXA GENUS SPECIES SUBTAXAFestuca heterophylla Festuca heterophylla
Festuca huoniiFestuca lemanii Festuca lemaniiFestuca longifolia Festuca longifoliaFestuca ovina Festuca ovinaFestuca pratensis Festuca pratensisFestuca rubra Festuca rubra
Festuca rubra subsp. arctica
Festuca nigrescens Festuca rubrasubsp. commutata
Festuca rubra subsp. juncea Festuca rubra subsp. junceaFestuca rubra subsp. pruinosa Festuca rubra subsp. junceaFestuca rubra subsp. litoralis Festuca rubra subsp. litoralisFestuca rubra subsp. rubra Festuca rubra subsp. rubra
Festuca rubra subsp. scoticaFestuca vivipara Festuca vivipara
UK Crop Wild Relatives Overview
Total UK taxa: 4111CWR agriculture and food: 973
20.3 % of UK flora is a crop wild relative for agriculture and food
UK Crop Wild Relatives Overview
Number of families: 72
1. Poaceae2. Cyperaceae3. Rosaceae4. Fabaceae5. Asteraceae
Number of genera: 233Number of species: 836
Database structure: occurrence data
• Floristic data: botanical surveys (most recent 1999)
• Data format: number of 10 by 10 km squares
• Change index to indicate relative change
Database structure: linking taxonomy with distribution data
GENUS SPECIES SUBTAXA DISLEVEL DISTRIBUTION TREND CWRNAME
Festuca rubra sens lat 2748 Red Fescues
Festuca rubra subsp. arctica 23
Festuca rubrasubsp. commutata 88
Festuca rubra subsp. juncea 168
Festuca rubra subsp. juncea 168
Festuca rubra subsp. litoralis 67
Festuca rubra subsp. rubra
Festuca rubra subsp. scotica 2
sensu lato
Occurrence categories
Occurence frequency categories(number of taxa within the given ranges of 10x10km grid
squares)
<1616-100101-200201-596597-1451>1451
> 50% (= very common)
20 – 50% (= common)
> 200 squares – 20%100 – 200 10 by 10 km squares
< 16 10 by 10 km squares (= rare)
16 – 100 10 by 10 km squares
(= scarce)
UK Crop Wild Relatives Occurrence Overview
19% of taxa is very common (>50% of grid squares)
37% of taxa is common to very common
46% of taxa occurs in less than 200 grid squares
UK Crop Wild Relatives in decline
11% of taxa is scarce (< 200 grids) AND in decline
12% of native taxa17% of archeophytes Are synanthropic taxa more
vulnerable?Examples of threatened
archeophytes:Carum carvi, Chenopodium ssp.
Database structure: Conservation related fields
• Threat assessment (IUCN)• Legal conservation status (UK Legislation)• Conservation action (Biodiversity Action Plan)
IUCN Threat Assessment
IUCN threat category native total taxaCR (Critically Endangered) 9 10EN (Endangered) 8 9VU (Vulnerable) 35 38NT (Near Threatened) 18 21LC (Least Concern) 13 14NS (Nationally Scarce) 84 92DD (Data Deficient) 3 3NE (Not Evaluated) 451 783
Conservation priorities: Endemics or socio-economics?
12 of 18 endemic taxa have IUCN threatened of near-threatened status
(14 of 18 endemic taxa are Sorbus)
Or socio-economic importance?
The construction of a national crop wild relatives database for the UK: conclusions
Taxonomy is important and time-consuming
Other data-entry is relatively easy and fast
IUCN assessment relatively easy
Application of CWR data: Avena strigosa Schreb.
Before 1970 1989- 1999
Distribution data of wild A. strigosa