The Art of Life project
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Transcript of The Art of Life project
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Trish Rose-Sandler, Missouri Botanical GardenSLRLN March 2013 St Louis MO Art of Life project
The Art of Life project
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Trish Rose-Sandler, Missouri Botanical GardenSLRLN March 2013 St Louis MO Art of Life project
What is Art of Life?
• Full title - The Art of Life: Data Mining and Crowdsourcing the Identification and Description of Natural History Illustrations from the Biodiversity Heritage Library (BHL)
• Grant given to Missouri Botanical Garden in St Louis• Funded by National Endowment for the Humanities• Runs May 2012-April 2014
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Trish Rose-Sandler, Missouri Botanical GardenSLRLN March 2013 St Louis MO Art of Life project
What is BHL?
• A consortium of natural history, botanical libraries and research institutions
• An open access digital library for historic biodiversity literature
• An open data repository of taxonomic names and bibliographic information
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Trish Rose-Sandler, Missouri Botanical GardenSLRLN March 2013 St Louis MO Art of Life project
Member Institutions• Academy of Natural Sciences Library and Archives• American Museum of Natural History Library • California Academy of Sciences Library• Cornell University Library • The Field Museum Library• Harvard University Botany Libraries • Harvard University, Ernst Mayr Library of the Museum of Comparative Zoology • Library of Congress • Marine Biological Laboratory / Woods Hole Oceanographic Institution Library• Missouri Botanical Garden Library• Natural History Museum, London, Library & Archives• The New York Botanical Garden • Royal Botanic Gardens, Kew, Library & Archives• Smithsonian Institution Libraries • United States Geological Survey Libraries
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Trish Rose-Sandler, Missouri Botanical GardenSLRLN March 2013 St Louis MO Art of Life project
BHL FT Staff
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Trish Rose-Sandler, Missouri Botanical GardenSLRLN March 2013 St Louis MO Art of Life project
BHL Global
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Trish Rose-Sandler, Missouri Botanical GardenSLRLN March 2013 St Louis MO Art of Life project
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Trish Rose-Sandler, Missouri Botanical GardenSLRLN March 2013 St Louis MO Art of Life project
BHL Browse
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Trish Rose-Sandler, Missouri Botanical GardenSLRLN March 2013 St Louis MO Art of Life project
BHL Search
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Trish Rose-Sandler, Missouri Botanical GardenSLRLN March 2013 St Louis MO Art of Life project
BHL Scientific Names
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Trish Rose-Sandler, Missouri Botanical GardenSLRLN March 2013 St Louis MO Art of Life project
BHL Book viewer
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Trish Rose-Sandler, Missouri Botanical GardenSLRLN March 2013 St Louis MO Art of Life project
BHL copyright and licensing
Public Domain Content Files Public Domain
Copyrighted Content Files
Metadata, OCR, Scientific Names
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Trish Rose-Sandler, Missouri Botanical GardenSLRLN March 2013 St Louis MO Art of Life project
BHL provides data via:• APIs• Data exports• OpenURL• OAI-PMH
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Trish Rose-Sandler, Missouri Botanical GardenSLRLN March 2013 St Louis MO Art of Life project
The website and webservice BioStor by Rod Page provides tools for extracting, annotating, and visualising information on literature from BHL (http://biostor.org/). In this example, Rod has identified articles found in the Proceedings of the United States National Museum.
Reuse of BHL data
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Trish Rose-Sandler, Missouri Botanical GardenSLRLN March 2013 St Louis MO Art of Life project
Reuse of BHL data
Ryan Schenk is using publication dates of works in BHL to build histograms of the number of publications-per-year for specific species, In this example, the Guniea Pig (http://synynyms.no.de/ )
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Trish Rose-Sandler, Missouri Botanical GardenSLRLN March 2013 St Louis MO Art of Life project
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Trish Rose-Sandler, Missouri Botanical GardenSLRLN March 2013 St Louis MO Art of Life project
Why the need for Art of Life?
Problem statement – users want access to images, access to images is limited to page by page scroll or viewing selection of images in Flickr, not searchable by image content (e.g. corn, zea mays)
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Trish Rose-Sandler, Missouri Botanical GardenSLRLN March 2013 St Louis MO Art of Life project
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Trish Rose-Sandler, Missouri Botanical GardenSLRLN March 2013 St Louis MO Art of Life project
5 Primary Objectives of Art of Life
Objective 1: Define an appropriate metadata schema for natural history illustrations
Objective 2: Build software tools to automatically identify illustrations in the BHL corpus
Objective 3: Enhance existing tools to enable the initial sorting, viewing, and editing of these identified visual resources.
Objective 4: Integrate tagging applications to enable a community of users to edit descriptive metadata for the illustrations
Objective 5: Integrate the descriptive metadata generated by users back into BHL portal both for access and preservation
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Trish Rose-Sandler, Missouri Botanical GardenSLRLN March 2013 St Louis MO Art of Life project
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Trish Rose-Sandler, Missouri Botanical GardenSLRLN March 2013 St Louis MO Art of Life project
Current status of Art of Life• Development of the algorithm is about 90% complete and will
be done by April 2013• Draft schema for describing natural history illustrations
available for public review http://tinyurl.com/9hm7nsb• Classifier tool – reusing an existing BHL tool developed by Joel
Richard called Macaw http://code.google.com/p/macaw-book-metadata-tool/
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Trish Rose-Sandler, Missouri Botanical GardenSLRLN March 2013 St Louis MO Art of Life project
4 algorithms that have been tested• Analysis of the scanning metadata, aka picture block data,
contained within the OCR files generated as part of the Internet Archive scanning process.
• Application of a technique that evaluates the vertical composition of a page by applying contrast and scaling transformations.
• Analysis of the image compression ratio for scanned pages.• Analysis of color properties of scanned pages.
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Trish Rose-Sandler, Missouri Botanical GardenSLRLN March 2013 St Louis MO Art of Life project
UI for Review of Algorithm
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Trish Rose-Sandler, Missouri Botanical GardenSLRLN March 2013 St Louis MO Art of Life project
Art of Life SchemaNeeds to support three objectives:
(1) to enable the discovery, description and use of the identified images by artists, biologists, humanities scholars, librarians, and educators;(2) to make BHL’s metadata and images available to other platforms; and(3) to import crowdsourced metadata generated in other platforms back into BHL.
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Trish Rose-Sandler, Missouri Botanical GardenSLRLN March 2013 St Louis MO Art of Life project
Schema landscape review– VRA Core 4.0 (borrowed 9 elements)– LIDO– Darwin Core (borrowed 2 elements)– Dublin Core
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Trish Rose-Sandler, Missouri Botanical GardenSLRLN March 2013 St Louis MO Art of Life project
ART OF LIFE SCHEMA ELEMENTS red =required
TitleTypeDateCopyrightSourceAgentSubjectsDescriptionInscription
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Trish Rose-Sandler, Missouri Botanical GardenSLRLN March 2013 St Louis MO Art of Life project
Title Stictospiza formosa
Type Paintings
Date Publication: 1898
Agent Author: Arthur G. Butler (1844-1925)Illustrator: F.W. Frohawk (1861-1946)
Description A pair of finches with green and yellow bodies resting on reeds
Subjects Scientific name: Amandava formosa (Latham, 1790) Vernacular Name: Green Avadavat or Green MuniaAccepted Name: Amandava formosa (Latham, 1790) Birds, finches
Inscriptions bottom center: Green Amaduvade Waxbill (Stictospiza formosa)
Source Butler, Arthur Gardiner. Foreign finches in captivity. Hull and London: Brumby and Clarke, limited,1889 (2nd edition). This image comes from the Biodiversity Heritage Library, and is available online at biodiversitylibrary.org/page/17195895
Rights Public domain
Example of illustration described using Art of Life schema
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Trish Rose-Sandler, Missouri Botanical GardenSLRLN March 2013 St Louis MO Art of Life project
How will this project benefit libraries?• Significant resource of natural history images that will be made openly
accessible and reusable.• Useful to varying audiences: artists, biologists, humanities scholars,
particularly historians of science; librarians, education and outreach. Anyone who uses images in their research and teaching.
• Algorithm will be made available and can be used on any text collections with OCR output.
• Schema can be applied to other image collections that contain a large
number of natural history illustrations.
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Trish Rose-Sandler, Missouri Botanical GardenSLRLN March 2013 St Louis MO Art of Life project
Thanks to Art of Life team!PI
Trish Rose-Sandler, Missouri Botanical GardenAlgorithm development
Ed Bachta, Charlie Moad, Kyle Jaebker, Indianapolis Museum of ArtSchema development
Gaurav Vaidya and Robert Guralnick, University of Colorado, BoulderWilliam Ulate, Missouri Botanical Garden
ProgrammingMike Lichtenberg, Missouri Botanical Garden
Consultants Doug Holland, Missouri Botanical Garden; Chris Freeland, Washington University (former PI for Art of Life)
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Trish Rose-Sandler, Missouri Botanical GardenSLRLN March 2013 St Louis MO Art of Life project
Interested? Here’s how you can help• We welcome your feedback on the schema! http://tinyurl.com/9hm7nsb• If you know of scholars and users who would be interested in these types
of images and would be interested either in participating in our survey or a brief focus groups about the schema please have them contact me [email protected]
• Would love to talk with other folks about their experiences with crowdsourcing of metadata, particularly if you’ve used flickr or Wikimedia commons
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Trish Rose-Sandler, Missouri Botanical GardenSLRLN March 2013 St Louis MO Art of Life project
For more info http://biodivlib.wikispaces.com/Art+of+Life
Contact: [email protected]@mobot.org