Synthetic Protein Mimics for Functional Protein Delivery · Synthetic Protein Mimics for Functional...

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Synthetic Protein Mimics for Functional Protein Delivery A. O ̈ zgü l Tezgel, Paejonette Jacobs, Coralie M. Backlund, Janice C. Telfer,* ,,§ and Gregory N. Tew* ,,,§ Department of Polymer Science and Engineering, Molecular and Cell Biology Program, and § Veterinary and Animal Science, University of Massachusetts, Amherst, Massachusetts 01003, United States * S Supporting Information ABSTRACT: The use of proteins as biological tools and therapeutic agents is limited due to the fact that proteins do not eectively cross the plasma membrane of cells. Here, we report a novel class of protein transporter molecules based on protein transduction domain mimics (PTDMs) synthesized via ring opening metathesis polymerization (ROMP). The PTDMs reported here were specically inspired by amphi- philic peptides known to deliver functional proteins into cells via noncovalent interactions between the peptide and the cargo. This contrasts with peptides like TAT, penetratin, and R9, which often require covalent fusion to their cargoes. Using the easily tunable synthetic ROMP platform, the importance of a longer hydrophobic segment with cationic guanidinium groups was established through the delivery of EGFP into Jurkat T cells. The most ecient of these protein transporters was used to deliver functional Cre Recombinase with 80% knockdown eciency into hard to transfect human T cells. Additionally, a C-terminally deleted form of the transcription factor Runx1 (Runx1.d190) was delivered into primary murine splenocytes, producing a 2-fold increase in c-Myc mRNA production, showcasing the versatility of this platform to deliver biologically active proteins into hard to transfect cell types. INTRODUCTION Proteins have tremendous value as basic research reagents and even greater potential as human therapeutics. 1 However, this potential is limited because many proteins that have interesting intercellular functions have poor permeability, or transduction, across cell membranes. This prevents access to internal cellular targets (in the cytosol and nucleus), and thus, major interest remains in developing new, more ecient, tools capable of delivering proteins into mammalian cells. 1 In general, there are four major approaches to protein delivery: (i) physical methods like electroporation 2,3 and microinjection; 4,5 (ii) viral-based vectors; 6 (iii) covalently attached delivery agents, most notably a class of molecules known as cell-penetrating peptides or protein transduction domains (PTDs); 710 and (iv) non- covalent assemblies between the protein and the delivery system. 1115 Perhaps the most commonly studied noncovalent delivery systems are amphiphilic peptides, like Pep-1, 16 but others also exist, such as lipid-based nanoparticles. 12,17 Despite some success, intracellular delivery remains a signicant challenge. The development of more potent PTDs will greatly increase the scope of accessible intracellular targets leading to an enormous increase in the number of protein reagents and therapeutics. Many studies have shown the peptide-based PTDs like TAT, oligoarginine, and penetratin can transduce proteins only when covalently fused to cargo. 79 More recently, supercharged GFP was shown to be as, or more, eective than small PTDs like TAT, oligoarginine, and penetratin in several side-by-side studies. 17 However, covalent fusions require each protein of interest to be produced as a unique molecule, limiting their availability and use. To overcome this limitation, focus on noncovalent platforms has increased. Amphiphilic, or block-type, peptides have been developed that enable noncovalent protein delivery including Pep-1 and Wr-T. 15 Pep-1 is the rst and the most widely studied peptide; it consists of a hydrophobic domain composed mainly of tryptophan (W), which is reported to be responsible for both cargo binding and cell membrane interactions. 16 The hydrophilic domain is derived from the nuclear localization sequence (NLS) of SV40 large T-antigen and contains six amino acids (KKKRKV). Although these peptides deliver many proteins eciently, including in vivo, to the best of our knowledge, there is no literature report showing the delivery of folded, functionally active proteins into nontrivial suspension human T cell lines and primary cells with high ecacy. Inspired by PTDs, more specically by amphiphilic delivery peptides, a series of protein transduction domain mimics (PTDMs) is reported here that enables highly ecient delivery of functional protein into hard to transfect cell types. These PTDMs contain a guanidine-rich domain connected to a hydrophobic domain consisting of phenylalanine-like function- Received: November 14, 2016 Revised: January 31, 2017 Published: February 6, 2017 Article pubs.acs.org/Biomac © 2017 American Chemical Society 819 DOI: 10.1021/acs.biomac.6b01685 Biomacromolecules 2017, 18, 819825

Transcript of Synthetic Protein Mimics for Functional Protein Delivery · Synthetic Protein Mimics for Functional...

Page 1: Synthetic Protein Mimics for Functional Protein Delivery · Synthetic Protein Mimics for Functional Protein Delivery A. Özgül Tezgel, †Paejonette Jacobs, ‡Coralie M. Backlund,

Synthetic Protein Mimics for Functional Protein DeliveryA. Ozgul Tezgel,† Paejonette Jacobs,‡ Coralie M. Backlund,† Janice C. Telfer,*,‡,§

and Gregory N. Tew*,†,‡,§

†Department of Polymer Science and Engineering, ‡Molecular and Cell Biology Program, and §Veterinary and Animal Science,University of Massachusetts, Amherst, Massachusetts 01003, United States

*S Supporting Information

ABSTRACT: The use of proteins as biological tools andtherapeutic agents is limited due to the fact that proteins donot effectively cross the plasma membrane of cells. Here, wereport a novel class of protein transporter molecules based onprotein transduction domain mimics (PTDMs) synthesized viaring opening metathesis polymerization (ROMP). ThePTDMs reported here were specifically inspired by amphi-philic peptides known to deliver functional proteins into cellsvia noncovalent interactions between the peptide and thecargo. This contrasts with peptides like TAT, penetratin, andR9, which often require covalent fusion to their cargoes. Usingthe easily tunable synthetic ROMP platform, the importance ofa longer hydrophobic segment with cationic guanidiniumgroups was established through the delivery of EGFP into Jurkat T cells. The most efficient of these protein transporters wasused to deliver functional Cre Recombinase with ∼80% knockdown efficiency into hard to transfect human T cells. Additionally,a C-terminally deleted form of the transcription factor Runx1 (Runx1.d190) was delivered into primary murine splenocytes,producing a 2-fold increase in c-Myc mRNA production, showcasing the versatility of this platform to deliver biologically activeproteins into hard to transfect cell types.

■ INTRODUCTIONProteins have tremendous value as basic research reagents andeven greater potential as human therapeutics.1 However, thispotential is limited because many proteins that have interestingintercellular functions have poor permeability, or transduction,across cell membranes. This prevents access to internal cellulartargets (in the cytosol and nucleus), and thus, major interestremains in developing new, more efficient, tools capable ofdelivering proteins into mammalian cells.1 In general, there arefour major approaches to protein delivery: (i) physical methodslike electroporation2,3 and microinjection;4,5 (ii) viral-basedvectors;6 (iii) covalently attached delivery agents, most notablya class of molecules known as cell-penetrating peptides orprotein transduction domains (PTDs);7−10 and (iv) non-covalent assemblies between the protein and the deliverysystem.11−15 Perhaps the most commonly studied noncovalentdelivery systems are amphiphilic peptides, like Pep-1,16 butothers also exist, such as lipid-based nanoparticles.12,17

Despite some success, intracellular delivery remains asignificant challenge. The development of more potent PTDswill greatly increase the scope of accessible intracellular targetsleading to an enormous increase in the number of proteinreagents and therapeutics. Many studies have shown thepeptide-based PTDs like TAT, oligoarginine, and penetratincan transduce proteins only when covalently fused to cargo.7−9

More recently, supercharged GFP was shown to be as, or more,effective than small PTDs like TAT, oligoarginine, and

penetratin in several side-by-side studies.17 However, covalentfusions require each protein of interest to be produced as aunique molecule, limiting their availability and use. Toovercome this limitation, focus on noncovalent platforms hasincreased. Amphiphilic, or block-type, peptides have beendeveloped that enable noncovalent protein delivery includingPep-1 and Wr-T.15 Pep-1 is the first and the most widelystudied peptide; it consists of a hydrophobic domain composedmainly of tryptophan (W), which is reported to be responsiblefor both cargo binding and cell membrane interactions.16 Thehydrophilic domain is derived from the nuclear localizationsequence (NLS) of SV40 large T-antigen and contains sixamino acids (KKKRKV). Although these peptides deliver manyproteins efficiently, including in vivo, to the best of ourknowledge, there is no literature report showing the delivery offolded, functionally active proteins into nontrivial suspensionhuman T cell lines and primary cells with high efficacy.Inspired by PTDs, more specifically by amphiphilic delivery

peptides, a series of protein transduction domain mimics(PTDMs) is reported here that enables highly efficient deliveryof functional protein into hard to transfect cell types. ThesePTDMs contain a guanidine-rich domain connected to ahydrophobic domain consisting of phenylalanine-like function-

Received: November 14, 2016Revised: January 31, 2017Published: February 6, 2017

Article

pubs.acs.org/Biomac

© 2017 American Chemical Society 819 DOI: 10.1021/acs.biomac.6b01685Biomacromolecules 2017, 18, 819−825

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alized monomers. The first PTDM contained domains of equallength and delivered EGFP into Jurkat T cells much moreefficiently than Pep-1; changing the guanidine functionalities toamines and the phenyl groups to indole rings decreased thedelivery efficiency. The length of the hydrophobic domain wasalso important, revealing that as the domain length wasincreased, protein delivery also increased. The protein deliveryefficiency was not largely affected under energy depletedconditions (ATP-depleted media or at 4 °C) indicating that alarge component of delivery involved energy independentpathways, or direct translocation, across the membrane. Studieswith Cre Recombinase were performed to examine the deliveryof a functional enzyme. This allowed direct comparison ofdelivery efficiencies between the noncovalent PTDM/Crecomplex and the commercially available TAT-Cre fusionprotein. The noncovalent PTDM/Cre system was 4× moreefficient at 100 nM Cre. Finally, our PTDM-based system wassuccessfully used to deliver a native C-terminally deleted formof transcription factor Runx1 (Runx1.dl90) into primarymurine splenocytes. The new PTDMs reported here wereshown to be more efficient at protein delivery than both theTAT-fusion proteins (covalent approach) and Pep-1/proteincomplexes (noncovalent approach) demonstrating the impor-tance of using biomimetic design principles to develop newtransduction platforms.

■ MATERIALS AND METHODSSynthesis of PTDMs. Boc-protected guanidinium and amine

functionalized oxanorbornene monomers and indole and benzyl-functionalized oxanorbornene monomer were synthesized as described

earlier (see Supporting Information for details). PTDMs werecopolymers of both guanidinium and benzyl functionalized monomersat varying block lengths, polymerized by Grubb’s third generationcatalyst (see Supporting Information for details). In this paper, werefer to the hydrophobic moieties as phenyl instead of benzyl toassimilate their likeness to phenylalanine. PTDMs were characterizedby NMR and gel permeation chromatography (GPC) having verynarrow polydispersity indices (PDIs; Table S1).

Cell Culture Conditions. Jurkat T cells (E6.1 clone, ATCC) andCre/LoxP-reporter Human T cell line (ABP-RP-CGFPLoxT,purchased from Allele Biotechnology) were cultured in completeRPMI (RPMI 1640 + glutamax I supplemented with 10% fetal bovineserum (FBS), HEPES, nonessential amino acids, sodium pyruvate, andpenicillin/streptomycin).

PTDM/EGFP Delivery into Jurkat T Cells. The 60 nM EGFP(purchased from BioVision) and PTDMs at varying concentrations(0.3−2.4 μM) were mixed in 200 μL of PBS and incubated for 30 minat room temperature for complex formation. Jurkat T cells werecounted and plated in a 12-well plate at 400000 cells/well in 800 μL ofeither serum-free RPMI 1640 or RPMI 1640 media with 10% FBS.Complexes were added onto the cells dropwise and incubated for 4 hat 37 °C. At the end of 4 h, cells were harvested and washed threetimes with heparin (20U/mL heparin in PBS) to remove any cellsurface bound molecules, resuspended in 500 μL of ice-cold PBScontaining 0.2% BSA and 1 mM EDTA (CBE), and then analyzed byflow cytometry using an LSRII (BectonDickinson). Cell-associatedfluorophores were excited at 488 nm, and fluorescence was measuredat 530 nm. The fluorescence signal was collected for 10000 cells, andviable cells were gated on to obtain a histogram of fluorescenceintensity per cell.

Mechanism of Uptake. The 60 nM EGFP and 1.2 μM PTDM-2were mixed in 200 μL of PBS for complex formation at roomtemperature for 30 min. Jurkat T cells were counted and plated in 12-

Figure 1. Screening of PTDMs to determine their protein delivery efficiency. (a) Chemical structures of PTDMs. (b) Flow cytometric analysisshowing EGFP delivery into Jurkat T cells via either PTDM-1 (red curve) or Pep-1 (green curve) at a molar ratio of 40:1 transporter to cargo. (c)Percentage of EGFP positive cells after treatment with different PTDM/EGFP complexes at two different molar ratios, 20 and 40. *p < 0.05 ofPTDM-1 vs PTDM-IG1. Jurkat T cells were treated with either PTDM/EGFP or Pep-1/EGFP complexes for 4 h and analyzed by flow cytometryafter washing three times with PBS containing heparin (20 U/L) to remove cell surface bound molecules. Concentrations of EGFP: 60 nM; PTDMs:1.2 μM (for molar ratio 20) and 2.4 μM (for molar ratio 40). Values and error bars represent the mean ± SD of three independent experiments.

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well plate at 400000 cells/well in 800 μL of RPMI 1640 media with10% FBS either at 37 or 4 °C, or in 800 μL of ATP-depleted medium(glucose-free RPMI 1640 containing 20 mM 2-deoxy-D-glucose and 10mM sodium azide). The complexes were added into the wellsdropwise and incubated for 1 h at 4 °C, 37 °C or in ATP-depletedmedium at 37 °C. At the end of 1 h, cells were harvested and washedthree times with heparin (20U/mL heparin in PBS) to remove any cellsurface bound molecules, resuspended in 500 μL of ice-cold PBScontaining 0.2% BSA and 1 mM EDTA (CBE), and then analyzed byflow cytometry using an LSRII (BectonDickinson). Cell-associatedfluorophores were excited at 488 nm, and fluorescence was measuredat 530 nm. The fluorescence signal was collected for 10000 cells, andviable cells were gated on to obtain a histogram of fluorescenceintensity per cell.Cre Delivery into Cre/LoxP Reporter Human T cells. Cre-

Recombinase (purchased from Excellgene) and PTDM-2 were mixedat a fixed ratio of 1:10 at varying concentrations (Cre: 25−200 nM;PTDM-2: 0.25−2 μM) in 200 μL in PBS and incubated for 30 min atroom temperature for complex formation. Cre reporter human T cellswere counted and plated in 12-well plate at 100000 cells/well in 800μL of serum-free RPMI 1640. Complexes were added onto the cellsdropwise and incubated for 2 h at 37 °C. Then, serum-free media wasexchanged with complete growth medium with 10% FBS, and cellswere incubated for 72 h before flow cytometry analysis. At 72 h, cellswere harvested washed two times and resuspended in 500 μL of ice-cold PBS containing 0.2% BSA and 1 mM EDTA (CBE) thenanalyzed by flow cytometry using an LSRII (BectonDickinson). Cell-associated fluorophores were excited at 488 nm, and fluorescence wasmeasured at 530 nm. The fluorescence signal was collected for 10000

cells, and viable cells were gated on to obtain a histogram offluorescence intensity per cell.

Runx1.d190 Delivery into Primary Mouse Splenocytes. Redblood cells in splenocytes from C57Bl/6J mice were lysed. The cellswere resuspended in HL1 serum-free media (Lonza, Allendale, NJ)supplemented with 2 mM glutamax, 50 units/mL penicillin, 50 μg/mLstreptomycin, and 0.05 mg/mL gentamycin (Invitrogen, Carlsbad,CA). A total of 3.3 × 106 cells in a 0.9 mL volume were left untreatedor incubated for 4 h with the following: 1.25 μM PTDM, 1.25 μMPTDM complexed with 125 nM EGFP (PTDM/EGFP) or 125 nMRunx1.d190 (PDTM/Runx1.d190), as well as 125 nM TAT-Runx1.d190. All treatments were added in a total volume of 100 μLof PBS. Only PBS was added to the untreated sample. After the 4 hincubation, cells were centrifuged at 3000 rpm for 5 min. Thesupernatant was removed and the remaining pellet was washed withPBS and resuspended into 0.5 mL of Qiazol (Qiagen, Valenica, CA).

Quantitative Real-Time PCR Analysis. RNA was extracted fromsamples using the Qiazol (Qiagen) reagent instructions steps 1−7followed by the RNeasy MinElute kit (Qiagen) according to themanufacturer’s instructions. RNA concentration and integrity wasaccessed by NanoDrop (Thermo Scientific, Hudson, NH). Approx-imately 1 μg of RNA was treated with DNase (Invitrogen) and cDNAsynthesis was carried out using iScript cDNA synthesis kit (Bio-Rad,Hercules, CA) according to the manufacturer’s instructions. Real-timePCR reactions were carried out using Takara SYBR Premix Ex Taq(Clontech, Mountain View, CA). The primers and cycling conditionsused were as follows: GAPDH forward 5′-CCAATGT GTCCGTCG-TGGATCTG-3′, GAPDH reverse 5′-TGCCTGCTTCACCACC-TTCTTG-3′, c-Myc forward 5′-GAGACACCGCCCACCACCAG-3′,

Figure 2. Comparison of EGFP delivery into Jurkat T cells via different PTDMs at a ratio of 20. (a) Structures and cartoon representation ofPTDMs with varying hydrophobicity and cationic character. Red balls represent hydrophobic domains and blue diamonds represent cationic content.(b) Percentage of EGFP positive cells. **p < 0.01 of PTDM-1 vs PTDM-2 and PTDM-3. (c) Protein uptake per cell as mean fluorescence intensity.*p < 0.05 of PTDM-2 vs PTDM-1. **p < 0.01 of PTDM-3 vs PTDM-1. (d) Flow cytometric analysis showing Jurkat T cells untreated (solid graycurve) or treated with PTDM-1/EGFP complexes (blue curve), PTDM-2/EGFP complexes (red curve), and PTDM-3/EGFP complexes (greencurve). Cells were incubated with PTDM/EGFP (1.2 μM PTDM, 60 nM EGFP) complexes for 4 h and analyzed by flow cytometry after washingthree times with PBS containing heparin (20 U/L) to remove cell surface bound molecules. Values and error bars represent the mean ± SD of threeindependent experiments.

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c-Myc reverse 5′-AGCCCGACTCCG ACCTCTTG-3′. Cyclingconditions: 95 °C for 10 s, 95 °C for 5 s, 60 °C for 10 s, and 72°C for 22 s for 40 cycles. For randomly selected data sets, calculationswere performed manually to confirm consistency with software results.PCR products were also resolved on a 2% tris-acetate-EDTA agarosegel to ensure that only a single band of the correct size was present insamples.Statistical Analysis. The results are expressed as means ± SD.

Unpaired two-tailed student t test using GraphPad Prism 5.0 was usedto determine P values for statistical significance.

■ RESULTS AND DISCUSSION

Design and EGFP Delivery Efficiencies of PTDMs. Thedesign of PTDM-1 (Figure 1a) was inspired by both Pep-1, alsoknown as Chariot, and the TAT peptide, since Pep-1 has beenshown to deliver a variety of peptide/protein cargos intodifferent cell types,16 and TAT is one of the most commonlyreported PTDs in the literature. PTDM-1 contained a phenyl/methyl functionalized hydrophobic block and a guanidiniumfunctionalized cationic block on a polyoxanorbornene back-bone (Figure 1a). To understand the role of each functionaldomain on delivery efficiency, we systematically replaced thephenyl groups with indole moieties and the guanidines withprimary amines. This resulted in the three PTDMs, shown inFigure 1a. The ability of these transporter molecules to deliverfolded, intact proteins intracellularly was assessed using EGFPdelivery into Jurkat T cells as a model system. Carriermolecules and EGFP were mixed in PBS and incubated for30 min at room temperature to allow complexes to form. JurkatT cells were treated with the complexes for 4 h, after which thecells were thoroughly washed with PBS containing heparin (20U/L) to remove all the cell surface bound molecules prior toflow cytometric analysis.18

First, the protein delivery abilities of PTDM-1 and Pep-1were compared at the complexation ratio of 40. Only ∼5% ofthe cells were detected as EGFP positive using Pep-1 (Figure1b, green curve); on the other hand, ∼95% of the cells wereEGFP positive following treatment with the PTDM-1 basedsystem (Figure 1b, red curve). Replacing the phenyl groups ofPTDM-1 with indole groups gave PTDM-IG1 (Figure 1c),which showed a slight reduction in activity compared toPTDM-1, but it did not affect the protein delivery ability.

Modifying the hydrophilic domain by replacing the guanidineswith amines nearly eliminated the polymer’s ability to deliver(PTDM-1 vs PTDM-A1, Figure 1c). Changing the phenylgroups of PTDM-A1 to indole groups resulted in PTDM-IA1,which showed slightly better activity compared to PTDM-A1,but still significantly lower efficiency than PTDM-1. Both ofthese changes create repeat units that more closely resemblethe tryptophan and lysine residues found in Pep-1. Interest-ingly, the closest chemical mimic to Pep-1, PTDM-IA1, wassignificantly less efficient than either of the two PTDMscontaining a guanidine hydrophilic domain inspired by theTAT peptide, indicating that, within this molecular scaffold,guanidine is much more effective than an amine for proteindelivery. The difference between the phenyl and the indolegroup in delivery efficiency was less than that of guanidine oramine, although the phenyl group was more effective.Given that the number of amino acids in the hydrophobic

and hydrophilic domains of Pep-1 is not equal, we nextexplored the relative domain lengths of the block copolymerPTDMs (Figure 2a). Here, we focused on PTDM-1 since it wasthe most efficient sequence. The chemistry platform allows therelative block lengths to be varied simply by controlling themonomer to initiator ratio. Two new PTDMs were prepared:one with a longer hydrophobic domain, similar to Pep-1(PTDM-2, Figure 2a), and the other with a longer hydrophilicblock (PTDM-3, Figure 2a). The size and zeta potential ofthese PTDMs complexed with their cargo at molar ratios of 10,20, and 40 (Table S2) was measured. Between polymerscomplexed at the same ratio, the size and zeta potentialremained consistent. As the ratio was increased, the size of thecomplexes decreased and the zeta potential increasedconsistently across all three PTDMs. This suggests that thereis no fundamental difference in the way the polymers interactwith the protein when the molecular architecture is changed.The efficiency of each PTDM was evaluated via EGFP

delivery into Jurkat T cells. PTDMs and EGFP were mixed atvarious molar ratios (PTDM/EGFP 5, 10, 15, 20, and 40) inPBS at a constant EGFP concentration (60 nM). In general,increasing the complexation ratio increased the percentage ofEGFP positive cells for each PTDM (Supporting Information,Figure S3a); however, it did not significantly impact the total

Figure 3. EGFP delivery via PTDM-2 into Jurkat T cells under conditions which favor nonendosomal pathway. (a) Flow cytometric analysisshowing Jurkat T cells treated with PTDM-2 (1.2 μM)/EGFP (60 nM) complexes at a ratio of 20 at 37 °C in normal growth medium (red curve), at37 °C in ATP-depleted medium (glucose-free RPMI containing 20 mM 2-deoxy-D-glucose and 10 mM sodium azide; green curve) and at 4 °C innormal growth medium (blue curve) for 1 h. (b) Percentage of EGFP positive cells after treatment with PTDM-2 (1.2 μM)/EGFP (60 nM)complexes for 1 h. Cells were incubated with PTDM/EGFP complexes for 1 h and analyzed by flow cytometry after washing three times with PBScontaining heparin (20 U/L) to remove cell surface bound molecules. Values and error bars represent the mean ± SD of three independentexperiments.

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amount of protein delivered per cell (Supporting Information,Figure S3b). Consistent with previous structure activityrelationships performed with this class of PTDM,19 varyingthe length of either domain affected the ability of these PDTMsto deliver protein to the whole cell population, especially at lowcomplexation ratios (Supporting Information, Figure S3a).PTDM-3, with the largest number of guanidinium groups, wasthe most efficient PTDM in targeting the whole population at acomplexation ratio of 15. However, the quantity of proteindelivered per cell increased upon lengthening the hydrophobicdomain and decreased upon lengthening the hydrophilic,cationic block (Supporting Information, Figure S3b).To more precisely compare the delivery efficiencies of the

three PTDMs, their activities were compared at a singlecomplexation ratio of 20. As shown in Figure 2b, PTDM-2 witha longer hydrophobic block and PTDM-3 with a longerguanidinium domain were able to target basically the entire cellpopulation (95−100%), unlike PTDM-1 (70%). There is asignificant difference between the percentages of EGFP positivecells treated with PTDM-2 vs PTDM-1 and PTDM-3 vsPTDM-1, emphasizing the importance of both the hydrophobicand cationic domains on the percentage of EGFP positive cells.On the other hand, the amount of intracellular proteindelivered per cell showed a significant increase with PTDM-2(Figure 2c). At the same time, there was a significant decrease(50%) of delivered protein when using PTDM-3 (50%decrease). In this case, it appears that PTDM-2, with thelonger hydrophobic domain, is the best PTDM for proteindelivery.Internalization of PTDM/Protein Complexes under

Energy-Depleted Conditions. To gain insight into thepredominant internalization pathway of these PTDM-2/EGFPcomplexes, delivery experiments were performed undercommonly used, modified conditions that inhibit most of theenergy dependent, or endosomal uptake, pathways.20 Twodifferent conditions were examined including the use of ATP-depleted media (glucose-free RPMI containing 20 mM 2-deoxy-D-glucose and 10 mM sodium azide) as well as deliveryat 4 °C in normal growth media. Figure 3a shows the

histograms for this set of experiments while Figure 3b quantifiesthe percentage of EGFP positive cells for all three conditions(37 °C, normal media; 37 °C ATP-depleted media; 4 °C,normal media). While a reduction in total delivery is observedfor the 4 °C experiments, there is still slightly more than 50%internal delivery even under these conditions. For comparison,TAT-fusion proteins are not internalized at 4 °C.21 In contrast,in ATP-depleted media at 37 °C, there is only a slight reductionin the percentage of EGFP positive cells. This is in sharpcontrast to TAT-fusion protein which shows more than 70%decrease under similar conditions.22 These experiments suggestthat while some of the PTDM-2/EGFP complexes internalizedby an endocytotic mechanism,23 a large part of their deliveryinvolves non-endocytotic cell membrane permeation. Previousreports have suggested the interaction with the membranecould cause negative Gaussian curvature, allowing the PTDMand the cargo to transverse the cell membrane into thecytosol.24

Biologically Active Cre-Recombinase Delivery intoHuman T Cells. To demonstrate the ability of this PTDM-mediated protein delivery system to deliver biologically active,functional proteins into cells, Cre-Recombinase was chosen as amodel system. Cre-Recombinase is an enzyme from bacter-iophage P1 used to induce site specific recombination of DNAsequences between two LoxP recognition sites.25,26 The use ofCre-Recombinase is well established for in vitro applicationsand it is increasingly being used to switch on/off genes in vivoto generate conditional mutants in both cultured cells andmodel animals.25−30 However, Cre must be coexpressed withinthe same cell since Cre is not excreted and does not enter cellsefficiently on its own.26 Thus, the efficient delivery of Cre isextremely important for a large and growing list of in vitro andin vivo studies.27−30 Cre was also chosen for this model studyfor several other reasons. Cre is delivered as a monomericprotein that must enter the nucleus and assemble into atetramer to mediate DNA recombination.31 Thus, it is arelatively complex test system. Finally, the commerciallyavailable TAT-Cre fusion protein, was used as a directcomparison to these new PTDMs. In the current work, the

Figure 4. Native-functional Cre delivery into Cre/LoxP-reporter Human T cell line (ABP-RP-CGFPLoxT) via PTDM-2. ABP-RP-CGFPLoxT is acell line in which Cre-mediated recombination deactivates the expression of GFP gene. (a) Flow cytometric analysis showing human T cells treatedwith PTDM-2 (1.5 μM)/Cre (150 nM) complexes (purple curve), TAT-Cre (150 nM; green curve), Cre (150 nM; orange curve), or untreated(gray solid curve). (b) Quantification of recombination activities of reporter cells treated with various concentrations of either complexes (PTDM-2/TAT-Cre-red line, PTDM-2/Cre-purple line, and TAT/Cre-blue line) or Cre proteins (Cre-orange line and TAT-Cre-green line). Cells were treatedwith PTDM-2/Cre complexes or Cre proteins alone in serum-free media for 2 h, then media was exchanged with complete growth media. At 72 h,cells were harvested, washed, and analyzed by flow cytometry.

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ability of PTDM-2 to deliver Cre-Recombinase was studied.Both Cre and TAT-Cre proteins used in this study contain aNLS, which is important for the recombination efficiency of theenzyme (Supporting Information, Figure S4). A Cre/LoxPreporter human T cell line was used, in which the GFP gene isflanked by two LoxP sites. This means GFP is normallyexpressed, but upon delivery of functional Cre-Recombinase,the GFP gene would be deleted leading to a loss of fluorescencewhich was easily monitored by flow cytometry.PTDM-2/Cre complexes were formed in PBS after

incubation at room temperature for 30 min. DifferentPTDM-2 to Cre ratios were tested, but with little variationbetween the ratios 10 was chosen for all experiments(Supporting Information, Figure S5). Various Cre concen-trations from 25 to 200 nM were examined. Representative flowcytometry histograms show that PTDM-2 mediated delivery ofCre resulted in ∼80% recombination activity (SupportingInformation, Figure S6a, red curve) at 200 nM Cre comparedto Cre alone which mediated only 5% recombination(Supporting Information, Figure S6a, green curve). This∼80% recombination at 200 nM Cre is significantly betterthan the 1 μM concentration previously reported to reach 40−70% recombination depending on the cell types studied.17,32

Supporting Information, Figure S6b, shows the concentrationdependence of recombination with 50% recombinationactivated at ∼75 nM Cre. Figure 4 compares the recombinationefficiencies of our noncovalent PTDM-based system directly tothe TAT-Cre fusion protein. This commercial fusion reagent ismost commonly used to deliver Cre internally.32 As shown inFigure 4a, this PTDM-2/Cre system (purple curve) is almostthree times more efficient than TAT-Cre (green curve),yielding 70% recombination compared with only 25% for thefusion protein at identical Cre concentrations. Figure 4b showsthe recombination efficiency as a function of concentration forthese two systems along with three controls including Crealone, the noncovalent mixture of TAT and Cre (TAT/Cre),and the noncovalent assembly between PTDM-2 and TAT-Crefusion protein (PTDM-2/TAT-Cre). As expected, neither Crealone nor the noncovalent mixture TAT/Cre affordedrecombination (Figure 4, orange curve). The direct comparisonof the two noncovalent mixtures, PTDM-2/Cre and TAT/Cre(Figure 4, purple and red curves, respectively), clearlydemonstrates the improvement enabled by these novelPTDMs compared to TAT. Finally, the additional activity ofthe PTDM-2/TAT-Cre system is encouraging since it suggestsa pathway to even further increase recombination throughprotein delivery. For the current systems, Cre-loxP recombi-nation efficiency is reported between 46 and 93%,17,33 even inthe systems where Cre is co-expressed within the same cellcontaining flanked gene in its DNA. The recombinationefficiency depends on the cell types, the distance between theloxP sites and the expression level of Cre, making Cre/loxP avery complicated system for which our complicated system andour noncovalent protein delivery system successfully mediated∼90% recombination efficiency.Native-Functional Transcription Factor, Runx1.d190

Delivery into Primary Splenocytes. Given the superior andhighly effective delivery of Cre-Recombinase, the ability todeliver a native protein was also considered. Transcriptionfactor Runx1 (also known as AML-1, PEPB2αB, CBFα2) wasoriginally isolated as a regulator of viral enhancers,34,35 as wellas the target of chromosomal translocations in humanleukemia.36,37 It also plays critical roles in the process of

hematopoiesis.38−42 A truncated form of Runx1 (Runx1.d190),which has increased binding activity and acts as a dominantnegative to full length Runx1,43,44 was used here. To investigatethe ability of PTDM-2 to deliver Runx transcriptionfactors.d190, primary mouse splenocytes were treated withthe PTDM-2/Runx1.d190 complexes (10:1). After 4 h oftreatment, the increase in the levels of c-Myc mRNA wasquantified using qRT-PCR (Figure 5). c-Myc is a potentoncogene that is overexpressed upon cell activation.45,46 andwhose transcription is repressed by full length Runx1.

qRT-PCR analysis showed a significant increase in theexpression of the Runx1.d190 target gene c-Myc in splenocytestreated with PTDM-2/Runx1.d190 complexes compared to thecells treated with all other controls including the TAT-fusedRunx1.d190 protein (Figure 5). No significant increase in c-Myc expression was observed in the splenocytes that weretreated with only PTDM-2 or PTDM-2/EGFP complexescompared to untreated cells. Collectively, these results indicatethat the PTDM-2 based protein delivery system can deliverRunx1.d190 into cells in a fully folded and functional form,form, an advantage over the covalently linked TAT andRunx1.d190, whose cell membrane translocation is mostefficient in a denatured form, and whose DNA-binding activitydepends on its ability to renature correctly and to translocate tothe nucleus.42,43,45 The data also indicate that PTDM-2mediated delivery of Runx1,46.d190 is more effective than thefusion protein with TAT.

■ CONCLUSIONSUsing biomimetic design principles, a series of new PTDMswas reported. Both hydrophobic phenyl and cationicguanidinium groups play important roles in PTDM activity.Increasing the hydrophobic content led to more efficienttransporters. The ability to efficiently deliver functional proteinsinto cells has been conclusively demonstrated. These novel

Figure 5. Native-functional transcription factor, Runx1.d190 deliveryinto primary splenocytes via PTDM-2. C57Bl/6J splenocytes wereharvested, red blood cells were lysed, and the cells were left untreatedor treated for 4 h with PTDM-2/Runx1.d190 complexes. The cellswere also treated with controls such as TAT-Runx1.d190 protein,PTDM-2/EGFP complexes, and only PTDM-2. SYBR green real-timePCR was carried out using cDNA prepared from the samples. The datashow a significant increase in the expression of a Runx1.d190 targetgene (c-Myc) in cells treated with PTDM-2/Runx1.d190 complexes; n= 3 and error bars represent ± SD.

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PTDMs are more efficient than noncovalent complexes of Pep-1 and TAT-fusion proteins. Two functional proteins weredelivered including a transcription factor into primary murinesplenocytes. The synthetic flexibility of this platform allowsnumerous other PTDMs to be envisaged, and this work iscurrently underway.

■ ASSOCIATED CONTENT*S Supporting InformationThe Supporting Information is available free of charge on theACS Publications website at DOI: 10.1021/acs.bio-mac.6b01685.

All detailed experimental procedures and character-izations, including monomer and polymer synthesis,NMR spectra, and GPC traces, as well as the biologicalassays protocols (PDF).

■ AUTHOR INFORMATIONCorresponding Authors*E-mail: [email protected].*E-mail: [email protected] N. Tew: 0000-0003-3277-7925NotesThe authors declare no competing financial interest.

■ ACKNOWLEDGMENTSThis work was primarily supported by NSF (CHE-0910963).Mass spectral data were obtained at the University ofMassachusetts Mass Spectrometry Facility, which is alsosupported in part by NSF. Authors would like to giveadditional thanks to Dr. Amy Burnside and the FlowCytometry core facility at the University of Massachusetts,Amherst.

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