Supplementary Information Titles - Nature Research...mammalian genome work as bi-directional...
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Supplementary Information Titles Journal: Nature Neuroscience Article Title: Wnt-mediated activation of NeuroD1 and retroelements during adult neurogenesis Corresponding Author: Tomoko Kuwabara Supplementary Item & Number (add rows as necessary) Title or Caption Supplementary Figure 1 Immunohistochemical analysis of Wnt3a in adult hippocampus. Supplementary Figure 2 The activity of β -catenin shRNA. Supplementary Figure 3 Schematic representation of retrovirus-based in vivo analysis to determine the role of β-catenin at the single cell level. Supplementary Figure 4 Immunohistochemical analysis of the DCX+ cells in β-catenin floxed mice Supplementary Figure 5 Immunohistochemical analysis of the TUJ1+ cells in β-catenin cKO mice. Supplementary Figure 6 Lineage tracing Sox2+ NSCs in β-catenin cKO mice with neuronal markers. Nature Neuroscience: doi:10.1038/nn.2360
Transcript of Supplementary Information Titles - Nature Research...mammalian genome work as bi-directional...
Supplementary Information Titles
Journal: Nature Neuroscience
Article Title: Wnt-mediated activation of NeuroD1 and retroelements during adult neurogenesis
Corresponding Author:
Tomoko Kuwabara
Supplementary Item & Number (add rows as necessary)
Title or Caption
Supplementary Figure 1
Immunohistochemical analysis of Wnt3a in adult
hippocampus.
Supplementary Figure 2
The activity of β-catenin shRNA.
Supplementary Figure 3
Schematic representation of retrovirus-based in vivo
analysis to determine the role of β-catenin at the single cell
level.
Supplementary Figure 4
Immunohistochemical analysis of the DCX+ cells in β-catenin floxed mice
Supplementary Figure 5
Immunohistochemical analysis of the TUJ1+ cells in β-catenin cKO mice.
Supplementary Figure 6
Lineage tracing Sox2+ NSCs in β-catenin cKO mice with neuronal markers.
Nature Neuroscience: doi:10.1038/nn.2360
Supplementary Figure 7
Infection of LV β-catenin shRNA in vivo.
Supplementary Figure 8
The β-catenin shRNA-GFP+ and control-GFP+ cells co-localized with Sox2.
Supplementary Figure 9
The shRNA-GFP cells co-localized with GFAP and the radial glial cell marker Nestin.
Supplementary Figure 10
Immunohistochemical analysis of apoptotic cells labeled by active caspase 3 in β-catenin cKO mice.
Supplementary Figure 11
Loss-of-function experiments of NeuroD1 by using siRNA with and without Wnt3a.
Supplementary Figure 12
NeuroD1 is necessary in Wnt3a-mediated neuronal differentiation.
Supplementary Figure 13
In vivo L1-based promoter activity.
Supplementary Figure 14
The expression of RUNX3 in NeuN+ mature neuron.
Supplementary Figure 15
Wnt-mediated regulatory mechanism to simultaneously coordinate activation of NeuroD1 and L1.
Supplementary Table 1
L1 elements proximal to the transcriptional start site of known protein-coding genes in human genome.
Supplementary Table 2
L1 elements proximal to the transcriptional start site of known protein-coding genes in mouse genome.
Supplementary Table 3
L1 elements proximal to the transcriptional start site of known protein-coding genes in rat genome.
SUPPLEMENTARY FIGURES Wnt-mediated activation of NeuroD1 and retroelements during adult neurogenesis
Tomoko Kuwabara, Jenny Hsieh, Alysson Muotri, Gene Yeo, Masaki Warashina,
Dieter Chichung Lie, and Lynne Moore, Kinichi Nakashima, Makoto Asashima and
Fred H. Gage
Nature Neuroscience: doi:10.1038/nn.2360
Supplemental Figure 1.
Immunohistochemical analysis of Wnt3a in adult hippocampus. Immunohistochemical analysis of adult hippocampal DG by using antibodies against Wnt3a (red) and astrocyte-specific markers. Astrocytes expressing S100β (green) also
produced Wnt3a protein [merged image with DAPI (blue) in left]. Astrocytes
expressing GFAP (middle) also produced Wnt3a protein (left, and merged image, right).
Double positive cells (GFAP+Wnt3a+) are indicated by white arrows.
Nature Neuroscience: doi:10.1038/nn.2360
Supplemental Figure 2. The activity of β-catenin shRNA. The knock-down
effect of shRNA on β-catenin protein was confirmed by Western blot (left panels).
The knock-down of β-catenin also caused the decrease in L1 ORF2 transcription, as
confirmed by RT-PCR (right panels).
Nature Neuroscience: doi:10.1038/nn.2360
Supplemental Fig. 3. Schematic representation of retrovirus-based in vivo analysis to determine the role of β-catenin at the single cell level. Retrovirus
containing Sox2 promoter-driven Cre/GFP (Sox2CreGFP) was injected into the DG of mice with a conditional ‘floxed’ allele of β-catenin reporter mice (β-cateninflox/ROSA26-EGFP; β-catenin cKO). Two weeks after the retrovirus injection
into β-catenin cKO mice, BrdU (colored in blue) was injected once a day for two weeks.
Supplemental Figure 4. Immunohistochemical analysis of the DCX+ cells in β-catenin floxed mice. Sox2CreGFP retrovirus was injected into the DG of control (left) or β-catenin cKO mice (right). Immunohistochemical analysis of the DCX+ (red), GFP+ cells (green) and
DAPI (blue) in both animal groups is shown. The GFP+ cells co-localizing with DCX in the control animal are indicated by white arrows (left panels).
Nature Neuroscience: doi:10.1038/nn.2360
Supplemental Figure 5. Immunohistochemical analysis of the TUJ1+ cells in β-catenin cKO mice. Immunohistochemical analysis of the TUJ1+ (red), GFP+ cells (green) and DAPI (blue)
in both control and β-catenin cKO mice is shown. GFP+TUJ1+ cells in the control animals are indicated by white arrows (left panels).
Nature Neuroscience: doi:10.1038/nn.2360
Supplemental Fig. 6. Lineage tracing Sox2+ NSCs in β-catenin cKO mice with neuronal markers. Quantification of GFP+ cells expressing various neuronal markers (DCX, TUJ1 and Prox-1) in DG of control and β-catenin cKO mice. Numbers (a) and percentage (b) of
GFP+ cells in the DG of control mice (white bars) and β-catenin cKO mice (black bars) are shown.
Nature Neuroscience: doi:10.1038/nn.2360
Supplemental Fig. 7. Infection of LV β-catenin shRNA in vivo. (a) Immunohistochemical analysis of the β-catenin shRNA-GFP+ cells (green) and mature neuronal cells (NeuN; magenta) is shown in left panel. The proportion of the cells double positive for NeuroD1 and GFP against total GFP+ cells is plotted for each set of
injection experiments (Control GFP and β-catenin shRNA-GFP). (b) Triple immunohistochemistry of NeuroD1, shRNA-GFP and BrdU is shown. NeuroD1+ cells did not co-localize with shRNA-GFP (green arrows) but well co-localized well
with BrdU (white arrows). (c) Control-EGFP+ cell was determined to be NeuroD1+
(red) and BrdU+ (blue, in the left panel). Triple staining of the control GFP+ cell with
NeuroD1 and DAPI (blue) is also shown in the right panel.
Nature Neuroscience: doi:10.1038/nn.2360
Nature Neuroscience: doi:10.1038/nn.2360
Supplemental Fig. 8. The β-catenin shRNA-GFP+ and control-GFP+ cells co-localized with Sox2. (a) Immunohistochemical analysis of the β-catenin shRNA-GFP+ cells (green) and neural stem cells (Sox2; red) is shown. The
shRNA-GFP cells co-localize with Sox2 (indicated by white arrows). (b) Triple immunohistochemistry of Sox2 (red), shRNA-GFP (green) and BrdU (blue) is shown in the left panel. Triple staining of same region by Sox2 (red), shRNA-GFP (green) and
DAPI (blue) is also shown in the right panel. (c) Control LV-GFP injections resulted
in many GFP+ cells in the granule cell layer of DG. Some of those GFP+ cells were
determined to be Sox2+ (white arrows) and BrdU+ (blue arrows).
Supplemental Fig. 9. The shRNA-GFP cells co-localized with GFAP and the radial glial cell marker Nestin. (a) The immunohistochemistry of GFAP (red),
shRNA-GFP (green) and DAPI (blue) is shown. The shRNA-GFP cells co-localize with GFAP, and the co-localizing cell (in white square region) is magnified in right panels. (b) The immunohistochemistry of Nestin (red), shRNA-GFP (green) and
DAPI (blue) is shown. The shRNA-GFP cells co-localizing with Nestin (in white square region) is magnified in right panels.
Nature Neuroscience: doi:10.1038/nn.2360
Supplemental Fig. 10. Immunohistochemical analysis of apoptotic cells labeled by active caspase 3 in β-catenin cKO mice. Representative image of AC3+ cells (red), GFP+ cells (green) and DAPI (blue) in
β-catenin cKO mice (left). GFP+ cell (green) was determined to be AC3+ (red, left
panels) and Sox2+ (blue, the right panel). Triple staining of the GFP+ cell with AC3+
and Sox2 (blue) is shown in the right panel.
Nature Neuroscience: doi:10.1038/nn.2360
Supplemental Fig. 11. Loss-of-function experiments of NeuroD1 by using siRNA with and without Wnt3a. Adult hippocampal NSCs were cultured under the introduction of NeuroD1 siRNA in vitro, with or without Wnt3a (50 ng/mL) for two days. Immunostaining of the neuron marker Map2AB (red) was performed and the percentage of Map2AB+ cells is shown in bottom of each panel.
Nature Neuroscience: doi:10.1038/nn.2360
Supplemental Fig. 12. NeuroD1 is necessary in Wnt3a-mediated neuronal differentiation. Adult neurosphere culture from ND1 cKO mice15. Immunostaining of the neuron marker TUJ1 (red) was performed on neurosphere cultures expressing lentivirus GFP (green) or Cre-GFP (green). Wnt3a ligand or DMSO was added to the
spheres for 2 days.
Nature Neuroscience: doi:10.1038/nn.2360
Supplemental Figure 13. In vivo L1-based promoter activity. The 5’ UTR of L1-driven GFP showed neurogenic area-specific expression. GFP+ cells (green) also express the neuron-specific β-III tubulin isoform, recognized by the
TUJ1 antibody (red).
Supplemental Fig. 14. The expression of RUNX3 in NeuN+ mature neuron.
Immunohistochemical analysis of adult hippocampal DG by using antibodies against
RUNX3 (red) and NeuN (green). Co-staining with RUNX3 (red) and NeuroD1 (cyan)
is also shown in bottom panels. *Some LINE-GFP expressions were observed within the differentiated neurons deeper [NeuroD1(-)] in the granule cell layer (Fig. 8a), and they were determined to be NeuN+ (Fig. 8c). Since previously it was determined that
RUNX3 increased L1 expression and retrotransposition (HeLa and 143B cells42), these data suggest that L1-based promoters retain to be active not only in the early neurogenic stage but also in mature neurons, probably by RUNX3. The role of RUNX3 in adult
Nature Neuroscience: doi:10.1038/nn.2360
neurogenesis may likely be in later stages rather than in the initial steps of L1 expression during the neurogenic stage, when NeuroD1 is expressed (Fig. 1) and regulated by Wnt/β-catenin signaling.
Supplemental Figure 15. Wnt-mediated regulatory mechanism to simultaneously coordinate activation of NeuroD1 and L1. Schematic representation of Sox/LEF
Nature Neuroscience: doi:10.1038/nn.2360
site-mediated transcriptional regulation during adult neurogenesis. Overlapping
Sox/LEF binding site is shown in green box. L1 retroelements embedded in
mammalian genome work as bi-directional promoters (red triangles under L1s),
suggesting that they may actively influence nearby genomic transcription status actively
during adult hippocampal neurogenesis.
Supplemental Table 1. L1 elements proximal to the transcriptional start site of
known protein-coding genes in human genome.
A) Gene ID (GenBank accession number).
B) Gene name
C) hg17 (human version 17)
D) chromosome
E) start coordinate of L1
F) end coordinate of L1
G-I) family of L1
J-) TCF and SOX2 sites a|b|c separated by colons ":"
a = location in L1 of the site,
b = site motif
c = which transcription factor (TF) (Sox or TCF/LEF)
Nature Neuroscience: doi:10.1038/nn.2360
AY255534 - hg17 chr3 155634071 155640211 L1PA4 LINE L1 405¦ATCAAA¦TCF:472¦AACAAAG¦SOX:472¦AACAAA¦TCF:572¦AACAAA¦TCF:622¦CTTTGAA¦SOX:623¦TTTGAA¦TCF:945¦AACAAA¦TCF:995¦ATCAAAG¦SOX:995¦ATCAAA¦TCF:1118¦AACAAAG¦SOX:1118¦AACAAA¦TCF:1173¦ATCAAA¦TCF:1394¦TTCAAA¦TCF:1610¦TTCAAA¦TCF:2104¦ATCAAA¦TCF:2298¦AACAAA¦TCF:2352¦AACAAAG¦SOX:2352¦AACAAA¦TCF:2359¦ATCAAA¦TCF:2489¦TACAAAG¦SOX:2489¦TACAAA¦TCF:2764¦AACAAA¦TCF:2792¦ATCAAA¦TCF:2914¦CTTTGAA¦SOX:2915¦TTTGAA¦TCF:2930¦AACAAAG¦SOX:2930¦AACAAA¦TCF:2966¦TTCAAAG¦SOX:2966¦TTCAAA¦TCF:3088¦TTCAAA¦TCF:3122¦ATCAAAG¦SOX:3122¦ATCAAA¦T
BC027488 - hg17 chr3 164503588 164511194 L1MA1 LINE L1 144¦TTTGAT¦TCF:153¦CATTGTT¦SOX:301¦TTCAATG¦SOX:1082¦TACAAAG¦SOX:1082¦TACAAA¦TCF:1696¦AACAAAG¦SOX:1696¦AACAAA¦TCF:1927¦TACAAA¦TCF:1972¦TTCAATG¦SOX:1986¦ATCAAAG¦SOX:1986¦ATCAAA¦TCF:2080¦AACAAA¦TCF:2109¦TTCAAA¦TCF:2188¦ATCAAA¦TCF:2334¦TTTGAA¦TCF:2397¦TACAAA¦TCF:2480¦TTCAAA¦TCF:2576¦AACAAA¦TCF:2618¦ATCAATG¦SOX:2796¦AACAAA¦TCF:2809¦TTCAAA¦TCF:2846¦AACAAA¦TCF:2891¦TACAAA¦TCF:3022¦CATTGTA¦SOX:3078¦AACAATG¦SOX:3204¦TTTGAT¦TCF:3276¦TTTGTA¦TCF:3312¦TACAATG¦SOX:3492¦ATCAAA¦TCF:3535¦CATTGAT¦SOX:3597¦AACAAA¦TCF:3888¦A
U91935 POU domain, class 6, transcription factor 2 hg17 chr7 38820367 38826392 L1PA2 LINE L1 402¦ATCAAA¦TCF:469¦AACAAAG¦SOX:469¦AACAAA¦TCF:569¦AACAAA¦TCF:623¦CTTTGAA¦SOX:624¦TTTGAA¦TCF:825¦AACAAA¦TCF:875¦ATCAAAG¦SOX:875¦ATCAAA¦TCF:999¦AACAAAG¦SOX:999¦AACAAA¦TCF:1021¦CTTTGAT¦SOX:1022¦TTTGAT¦TCF:1054¦ATCAAA¦TCF:1083¦TTCAAA¦TCF:1111¦CTTTGAA¦SOX:1112¦TTTGAA¦TCF:1996¦ATCAAA¦TCF:2190¦AACAAA¦TCF:2244¦AACAAAG¦SOX:2244¦AACAAA¦TCF:2251¦ATCAAA¦TCF:2381¦TACAAAG¦SOX:2381¦TACAAA¦TCF:2451¦ATCAATG¦SOX:2655¦AACAAA¦TCF:2683¦ATCAAA¦TCF:2805¦CTTTGAA¦SOX:2806¦TTTGAA¦TCF:2821¦AACAAAG¦SOX:2821¦AACAAA¦TCF:2857¦TTCAAAG¦S
AK127911 - hg17 chr8 32148418 32154543 L1PA4 LINE L1 407¦ATCAAA¦TCF:474¦AACAAAG¦SOX:474¦AACAAA¦TCF:574¦AACAAA¦TCF:624¦CTTTGAA¦SOX:625¦TTTGAA¦TCF:947¦AACAAA¦TCF:997¦ATCAAAG¦SOX:997¦ATCAAA¦TCF:1120¦AACAAAG¦SOX:1120¦AACAAA¦TCF:1142¦CTTTGAT¦SOX:1143¦TTTGAT¦TCF:1170¦ATCAAA¦TCF:1199¦TTTGAA¦TCF:1353¦TTTGAT¦TCF:1450¦AACAAAG¦SOX:1450¦AACAAA¦TCF:1605¦TTCAAA¦TCF:2045¦ATCAAAG¦SOX:2045¦ATCAAA¦TCF:2111¦ATCAAA¦TCF:2294¦AACAAA¦TCF:2305¦AACAAA¦TCF:2360¦AACAAAG¦SOX:2360¦AACAAA¦TCF:2367¦ATCAAA¦TCF:2601¦CATTGAA¦SOX:2770¦AACAAA¦TCF:2798¦ATCAAA¦TCF:2891¦AACAAA¦TCF:2913¦CTTTGAA¦S
AF238315 HZFw1 protein isoform 1 hg17 chr6 30156344 30162381 L1PA3 LINE L1 398¦ATCAAA¦TCF:465¦AACAAA¦TCF:565¦AACAAA¦TCF:616¦CTTTGAA¦SOX:617¦TTTGAA¦TCF:818¦AACAAA¦TCF:991¦AACAAAG¦SOX:991¦AACAAA¦TCF:1046¦ATCAAA¦TCF:1075¦TTCAAA¦TCF:1103¦CTTTGAA¦SOX:1104¦TTTGAA¦TCF:1988¦ATCAAA¦TCF:2182¦AACAAA¦TCF:2237¦AACAAAG¦SOX:2237¦AACAAA¦TCF:2244¦ATCAAA¦TCF:2374¦TACAAAG¦SOX:2374¦TACAAA¦TCF:2648¦AACAAA¦TCF:2676¦ATCAAA¦TCF:2798¦CTTTGAA¦SOX:2799¦TTTGAA¦TCF:2814¦AACAAAG¦SOX:2814¦AACAAA¦TCF:2850¦TTCAAAG¦SOX:2850¦TTCAAA¦TCF:2972¦TTCAAA¦TCF:3079¦TTTGAA¦TCF:3091¦AACAAA¦TCF:3142¦ATCAAA¦TCF:3222¦TACAAA¦TC
AF071882 epidermal type II transmembrane serine protease hg17 chr4 68661898 68667926 L1PA2 LINE L1 403¦ATCAAA¦TCF:470¦AACAAAG¦SOX:470¦AACAAA¦TCF:570¦AACAAA¦TCF:621¦CTTTGAA¦SOX:622¦TTTGAA¦TCF:822¦AACAAA¦TCF:872¦ATCAAAG¦SOX:872¦ATCAAA¦TCF:995¦AACAAAG¦SOX:995¦AACAAA¦TCF:1050¦ATCAAA¦TCF:1079¦TTCAAA¦TCF:1107¦CTTTGAA¦SOX:1108¦TTTGAA¦TCF:1627¦TTCAAAG¦SOX:1627¦TTCAAA¦TCF:1992¦ATCAAA¦TCF:2186¦AACAAA¦TCF:2241¦AACAAAG¦SOX:2241¦AACAAA¦TCF:2248¦ATCAAA¦TCF:2378¦TACAAAG¦SOX:2378¦TACAAA¦TCF:2652¦AACAAA¦TCF:2680¦ATCAAA¦TCF:2802¦CTTTGAA¦SOX:2803¦TTTGAA¦TCF:2818¦AACAAAG¦SOX:2818¦AACAAA¦TCF:2854¦TTCAAAG¦SOX:2854¦TTCAAA¦TC
BC050425 zinc finger protein 322B hg17 chr9 97046980 97053142 L1PA3 LINE L1 413¦ATCAAA¦TCF:480¦AACAAAG¦SOX:480¦AACAAA¦TCF:580¦AACAAA¦TCF:631¦CTTTGAA¦SOX:632¦TTTGAA¦TCF:1011¦ATCAAAG¦SOX:1011¦ATCAAA¦TCF:1132¦AACAAAG¦SOX:1132¦AACAAA¦TCF:1216¦TTCAAA¦TCF:1244¦CTTTGAA¦SOX:1245¦TTTGAA¦TCF:1468¦AACAAAG¦SOX:1468¦AACAAA¦TCF:2127¦ATCAAA¦TCF:2321¦AACAAA¦TCF:2376¦AACAAAG¦SOX:2376¦AACAAA¦TCF:2383¦ATCAAA¦TCF:2814¦ATCAAA¦TCF:2952¦AACAAAG¦SOX:2952¦AACAAA¦TCF:2988¦TTCAAAG¦SOX:2988¦TTCAAA¦TCF:3100¦AACAAA¦TCF:3110¦TTCAAA¦TCF:3184¦TTCAAA¦TCF:3216¦TTTGAA¦TCF:3228¦AACAAA¦TCF:3280¦ATCAAA¦TCF:3337¦TACAAA
AK127610 putative UST1-like organic anion transporter hg17 chr11 62754698 62760853 L1PA5 LINE L1 420¦ATCAAA¦TCF:487¦AACAAAG¦SOX:487¦AACAAA¦TCF:587¦AACAAA¦TCF:637¦CTTTGAA¦SOX:638¦TTTGAA¦TCF:960¦AACAAA¦TCF:1010¦ATCAAAG¦SOX:1010¦ATCAAA¦TCF:1132¦AACAAAG¦SOX:1132¦AACAAA¦TCF:1155¦TTCAATG¦SOX:1187¦ATCAAA¦TCF:1244¦CTTTGAA¦SOX:1245¦TTTGAA¦TCF:1321¦AACAATG¦SOX:1365¦AACAATG¦SOX:1407¦ATCAAA¦TCF:1460¦AACAAA¦TCF:1468¦AACAAAG¦SOX:1468¦AACAAA¦TCF:1505¦AACAAA¦TCF:1624¦TTCAAA¦TCF:2081¦AACAAA¦TCF:2135¦ATCAAA¦TCF:2329¦AACAAA¦TCF:2384¦AACAAAG¦SOX:2384¦AACAAA¦TCF:2391¦ATCAAA¦TCF:2521¦TACAAAG¦SOX:2521¦TACAAA¦TCF:2591¦ATCAA
BC028728 sperm-associated cation channel 2 isoform 4 hg17 chr15 41729465 41735492 L1PA3 LINE L1 387¦ATCAAA¦TCF:454¦AACAAAG¦SOX:454¦AACAAA¦TCF:554¦AACAAA¦TCF:605¦CTTTGAA¦SOX:606¦TTTGAA¦TCF:807¦AACAAA¦TCF:980¦AACAAAG¦SOX:980¦AACAAA¦TCF:1035¦ATCAAA¦TCF:1064¦TTCAAA¦TCF:1092¦CTTTGAA¦SOX:1093¦TTTGAA¦TCF:1863¦AACAAA¦TCF:1976¦ATCAAA¦TCF:2170¦AACAAA¦TCF:2225¦AACAAAG¦SOX:2225¦AACAAA¦TCF:2232¦ATCAAA¦TCF:2378¦TACAAAG¦SOX:2378¦TACAAA¦TCF:2652¦AACAAA¦TCF:2680¦ATCAAA¦TCF:2802¦CTTTGAA¦SOX:2803¦TTTGAA¦TCF:2818¦AACAAAG¦SOX:2818¦AACAAA¦TCF:2854¦TTCAAAG¦SOX:2854¦TTCAAA¦TCF:2976¦TTCAAA¦TCF:3050¦TTCAAA¦TCF:3082¦TTTGAA¦TC
AY499142 - hg17 chr3 152442258 152448258 L1PA2 LINE L1 393¦ATCAAA¦TCF:460¦AACAAAG¦SOX:460¦AACAAA¦TCF:560¦AACAAA¦TCF:611¦CTTTGAA¦SOX:612¦TTTGAA¦TCF:806¦AACAAA¦TCF:856¦ATCAAAG¦SOX:856¦ATCAAA¦TCF:978¦AACAAAG¦SOX:978¦AACAAA¦TCF:1033¦ATCAAA¦TCF:1062¦TTCAAA¦TCF:1090¦CTTTGAA¦SOX:1091¦TTTGAA¦TCF:1975¦ATCAAA¦TCF:2169¦AACAAA¦TCF:2224¦AACAAAG¦SOX:2224¦AACAAA¦TCF:2231¦ATCAAA¦TCF:2361¦TACAAAG¦SOX:2361¦TACAAA¦TCF:2635¦AACAAA¦TCF:2663¦ATCAAA¦TCF:2785¦CTTTGAA¦SOX:2786¦TTTGAA¦TCF:2801¦AACAAAG¦SOX:2801¦AACAAA¦TCF:2837¦TTCAAAG¦SOX:2837¦TTCAAA¦TCF:2959¦TTCAAA¦TCF:3033¦TTCAAA¦TCF
AF279779 cholinergic receptor, muscarinic 3 hg17 chr1 236112839 236118864 L1HS LINE L1 399¦ATCAAA¦TCF:466¦AACAAAG¦SOX:466¦AACAAA¦TCF:566¦AACAAA¦TCF:617¦CTTTGAA¦SOX:618¦TTTGAA¦TCF:819¦AACAAA¦TCF:869¦ATCAAAG¦SOX:869¦ATCAAA¦TCF:991¦AACAAAG¦SOX:991¦AACAAA¦TCF:1046¦ATCAAA¦TCF:1075¦TTCAAA¦TCF:1103¦CTTTGAA¦SOX:1104¦TTTGAA¦TCF:1988¦ATCAAA¦TCF:2182¦AACAAA¦TCF:2237¦AACAAAG¦SOX:2237¦AACAAA¦TCF:2244¦ATCAAA¦TCF:2374¦TACAAAG¦SOX:2374¦TACAAA¦TCF:2648¦AACAAA¦TCF:2676¦ATCAAA¦TCF:2798¦CTTTGAA¦SOX:2799¦TTTGAA¦TCF:2814¦AACAAAG¦SOX:2814¦AACAAA¦TCF:2850¦TTCAAAG¦SOX:2850¦TTCAAA¦TCF:2972¦TTCAAA¦TCF:3046¦TTCAAA¦TCF
AB051505 - hg17 chr7 139256299 139262387 L1PA5 LINE L1 390¦ATCAAA¦TCF:557¦AACAAA¦TCF:607¦CTTTGAA¦SOX:608¦TTTGAA¦TCF:917¦AACAAA¦TCF:967¦ATCAAAG¦SOX:967¦ATCAAA¦TCF:1155¦AACAAA¦TCF:1184¦TTCAAA¦TCF:1341¦TTTGAT¦TCF:1378¦ATCAAA¦TCF:1434¦AACAAA¦TCF:1438¦AACAAAG¦SOX:1438¦AACAAA¦TCF:1594¦TTCAAA¦TCF:2099¦ATCAAA¦TCF:2292¦AACAAA¦TCF:2348¦AACAAAG¦SOX:2348¦AACAAA¦TCF:2355¦ATCAAA¦TCF:2470¦TACAAA¦TCF:2743¦AACAAA¦TCF:2771¦ATCAAA¦TCF:2893¦CTTTGAA¦SOX:2894¦TTTGAA¦TCF:2909¦AACAAAG¦SOX:2909¦AACAAA¦TCF:3067¦TTCAAA¦TCF:3141¦TTCAAA¦TCF:3150¦ATCAATG¦SOX:3186¦AACAAA¦TCF:3234¦ATCAAA¦TC
U88898 - hg17 chrY 21547766 21553802 L1PA3 LINE L1 403¦ATCAAA¦TCF:470¦AACAAAG¦SOX:470¦AACAAA¦TCF:570¦AACAAA¦TCF:621¦CTTTGAA¦SOX:622¦TTTGAA¦TCF:823¦AACAAA¦TCF:873¦ATCAAAG¦SOX:873¦ATCAAA¦TCF:997¦AACAAAG¦SOX:997¦AACAAA¦TCF:1052¦ATCAAA¦TCF:1081¦TTCAAA¦TCF:1109¦CTTTGAA¦SOX:1110¦TTTGAA¦TCF:1994¦ATCAAA¦TCF:2188¦AACAAA¦TCF:2243¦AACAAA¦TCF:2250¦ATCAAA¦TCF:2563¦TTTGTT¦TCF:2649¦AACAAA¦TCF:2677¦ATCAAA¦TCF:2800¦TTTGAA¦TCF:2815¦AACAAAG¦SOX:2815¦AACAAA¦TCF:2830¦TACAATG¦SOX:2852¦TTCAAAG¦SOX:2852¦TTCAAA¦TCF:2974¦TTCAAA¦TCF:3048¦TTCAAA¦TCF:3080¦TTTGAA¦TCF:3092¦AACAAA¦TCF:3
BC002897 zinc finger protein 343 hg17 chr20 2429471 2435604 L1PA4 LINE L1 404¦ATCAAA¦TCF:471¦AACAAAG¦SOX:471¦AACAAA¦TCF:575¦AACAAA¦TCF:625¦CTTTGAA¦SOX:626¦TTTGAA¦TCF:948¦AACAAA¦TCF:998¦ATCAAAG¦SOX:998¦ATCAAA¦TCF:1122¦AACAAAG¦SOX:1122¦AACAAA¦TCF:1177¦ATCAAA¦TCF:1398¦ATCAAA¦TCF:1453¦AACAAA¦TCF:1457¦AACAAAG¦SOX:1457¦AACAAA¦TCF:2118¦ATCAAA¦TCF:2312¦AACAAA¦TCF:2367¦AACAAAG¦SOX:2367¦AACAAA¦TCF:2374¦ATCAAA¦TCF:2419¦AACAAA¦TCF:2774¦AACAAA¦TCF:2802¦ATCAAA¦TCF:2924¦CTTTGAA¦SOX:2925¦TTTGAA¦TCF:2940¦AACAAAG¦SOX:2940¦AACAAA¦TCF:2976¦TTCAAAG¦SOX:2976¦TTCAAA¦TCF:3098¦TTCAAA¦TCF:3172¦TTCAAA¦TC
AB018295 NY-REN-7 antigen hg17 chr5 177145805 177151923 L1PA5 LINE L1 405¦ATCAAA¦TCF:472¦AACAAAG¦SOX:472¦AACAAA¦TCF:572¦AACAAA¦TCF:622¦CTTTGAA¦SOX:623¦TTTGAA¦TCF:800¦ATCAAA¦TCF:993¦ATCAAAG¦SOX:993¦ATCAAA¦TCF:1113¦AACAAAG¦SOX:1113¦AACAAA¦TCF:1168¦ATCAAA¦TCF:1353¦TTTGAT¦TCF:1390¦ATCAAA¦TCF:1446¦AACAAA¦TCF:1450¦AACAAAG¦SOX:1450¦AACAAA¦TCF:1606¦TTCAAA¦TCF:2111¦ATCAAA¦TCF:2305¦AACAAA¦TCF:2360¦AACAAAG¦SOX:2360¦AACAAA¦TCF:2367¦ATCAAA¦TCF:2497¦TACAAAG¦SOX:2497¦TACAAA¦TCF:2771¦AACAAA¦TCF:2799¦ATCAAA¦TCF:2892¦AACAAA¦TCF:2921¦CTTTGAA¦SOX:2922¦TTTGAA¦TCF:2937¦AACAAAG¦SOX:2937¦AACAAA¦TC
M28826 CD1B antigen, b polypeptide hg17 chr1 155118960 155125099 L1PA4 LINE L1 461¦AACAAAG¦SOX:461¦AACAAA¦TCF:561¦AACAAA¦TCF:611¦CTTTGAA¦SOX:612¦TTTGAA¦TCF:934¦AACAAA¦TCF:983¦ATCAAAG¦SOX:983¦ATCAAA¦TCF:990¦ATCAAAG¦SOX:990¦ATCAAA¦TCF:1106¦AACAAAG¦SOX:1106¦AACAAA¦TCF:1161¦ATCAAA¦TCF:1345¦TTTGAT¦TCF:1395¦AACAAAG¦SOX:1395¦AACAAA¦TCF:2102¦ATCAAA¦TCF:2295¦AACAAA¦TCF:2358¦ATCAAA¦TCF:2488¦TACAAAG¦SOX:2488¦TACAAA¦TCF:2577¦AACAAAG¦SOX:2577¦AACAAA¦TCF:2762¦TACAAA¦TCF:2790¦ATCAAA¦TCF:2912¦CTTTGAA¦SOX:2913¦TTTGAA¦TCF:2928¦AACAAA¦TCF:3086¦TTCAAA¦TCF:3160¦TTCAAA¦TCF:3168¦ATCAATG¦SOX:3204¦AACAAA¦TC
AK026795 secernin 3 hg17 chr2 175094693 175100717 L1PA2 LINE L1 401¦ATCAAA¦TCF:468¦AACAAAG¦SOX:468¦AACAAA¦TCF:568¦AACAAA¦TCF:619¦CTTTGAA¦SOX:620¦TTTGAA¦TCF:821¦AACAAA¦TCF:871¦ATCAAAG¦SOX:871¦ATCAAA¦TCF:994¦AACAAAG¦SOX:994¦AACAAA¦TCF:1049¦ATCAAA¦TCF:1078¦TTCAAA¦TCF:1106¦CTTTGAA¦SOX:1107¦TTTGAA¦TCF:1717¦AACAAA¦TCF:1991¦ATCAAA¦TCF:2183¦AACAAA¦TCF:2238¦AACAAAG¦SOX:2238¦AACAAA¦TCF:2245¦ATCAAA¦TCF:2375¦TACAAAG¦SOX:2375¦TACAAA¦TCF:2445¦ATCAATG¦SOX:2649¦AACAAA¦TCF:2677¦ATCAAA¦TCF:2799¦CTTTGAA¦SOX:2800¦TTTGAA¦TCF:2851¦TTCAAAG¦SOX:2851¦TTCAAA¦TCF:2973¦TTCAAA¦TCF:3047¦TTCAAA¦TCF
AK055902 hypothetical protein FLJ31340 hg17 chr7 86313723 86319735 L1PA2 LINE L1 406¦ATCAAA¦TCF:473¦AACAAAG¦SOX:473¦AACAAA¦TCF:573¦AACAAA¦TCF:624¦CTTTGAA¦SOX:625¦TTTGAA¦TCF:819¦AACAAA¦TCF:869¦ATCAAAG¦SOX:869¦ATCAAA¦TCF:991¦AACAAAG¦SOX:991¦AACAAA¦TCF:1046¦ATCAAA¦TCF:1075¦TTCAAA¦TCF:1103¦CTTTGAA¦SOX:1104¦TTTGAA¦TCF:1813¦TTTGTA¦TCF:1986¦ATCAAA¦TCF:2234¦AACAAAG¦SOX:2234¦AACAAA¦TCF:2241¦ATCAAA¦TCF:2371¦TACAAAG¦SOX:2371¦TACAAA¦TCF:2441¦ATCAATG¦SOX:2645¦AACAAA¦TCF:2673¦ATCAAA¦TCF:2794¦CTTTGAA¦SOX:2795¦TTTGAA¦TCF:2810¦AACAAAG¦SOX:2810¦AACAAA¦TCF:2846¦TTCAAAG¦SOX:2846¦TTCAAA¦TCF:2966¦CATTGAA¦S
BC052962 hypothetical protein FLJ40243 hg17 chr5 41109136 41115287 L1PA4 LINE L1 313¦AACAAA¦TCF:406¦ATCAAA¦TCF:572¦AACAAA¦TCF:622¦CTTTGAA¦SOX:623¦TTTGAA¦TCF:945¦AACAAA¦TCF:967¦ATCAAA¦TCF:995¦ATCAAAG¦SOX:995¦ATCAAA¦TCF:1119¦AACAAAG¦SOX:1119¦AACAAA¦TCF:1174¦ATCAAA¦TCF:1268¦ATCAATG¦SOX:1455¦AACAAAG¦SOX:1455¦AACAAA¦TCF:1611¦TTCAAA¦TCF:2117¦ATCAAA¦TCF:2311¦AACAAA¦TCF:2366¦AACAAAG¦SOX:2366¦AACAAA¦TCF:2373¦ATCAAA¦TCF:2503¦TACAAAG¦SOX:2503¦TACAAA¦TCF:2751¦AACAAA¦TCF:2777¦AACAAA¦TCF:2805¦ATCAAA¦TCF:2927¦CTTTGAA¦SOX:2928¦TTTGAA¦TCF:2943¦AACAAAG¦SOX:2943¦AACAAA¦TCF:2979¦TTCAAAG¦SOX:2979¦TTCAAA¦T
AF228636 interleukin 2 precursor hg17 chr4 123738535 123744755 L1PA4 LINE L1 410¦ATCAAA¦TCF:477¦AACAAAG¦SOX:477¦AACAAA¦TCF:577¦AACAAA¦TCF:950¦AACAAA¦TCF:1000¦ATCAAAG¦SOX:1000¦ATCAAA¦TCF:1179¦ATCAAA¦TCF:1399¦ATCAAA¦TCF:1459¦AACAAAG¦SOX:1459¦AACAAA¦TCF:1615¦TTCAAA¦TCF:2115¦ATCAAA¦TCF:2309¦AACAAA¦TCF:2364¦AACAAAG¦SOX:2364¦AACAAA¦TCF:2371¦ATCAAA¦TCF:2501¦TACAAAG¦SOX:2501¦TACAAA¦TCF:2571¦ATCAATG¦SOX:2775¦AACAAA¦TCF:2803¦ATCAAA¦TCF:2925¦CTTTGAA¦SOX:2926¦TTTGAA¦TCF:2941¦AACAAAG¦SOX:2941¦AACAAA¦TCF:2977¦TTCAAAG¦SOX:2977¦TTCAAA¦TCF:3099¦TTCAAA¦TCF:3163¦TACAAA¦TCF:3175¦TTCAAA¦TCF:3183¦ATCAA
AK128539 - hg17 chr5 177131852 177137881 L1HS LINE L1 405¦ATCAAA¦TCF:472¦AACAAAG¦SOX:472¦AACAAA¦TCF:572¦AACAAA¦TCF:623¦CTTTGAA¦SOX:624¦TTTGAA¦TCF:875¦ATCAAAG¦SOX:875¦ATCAAA¦TCF:998¦AACAAAG¦SOX:998¦AACAAA¦TCF:1053¦ATCAAA¦TCF:1082¦TTCAAA¦TCF:1110¦CTTTGAA¦SOX:1111¦TTTGAA¦TCF:1995¦ATCAAA¦TCF:2189¦AACAAA¦TCF:2244¦AACAAAG¦SOX:2244¦AACAAA¦TCF:2251¦ATCAAA¦TCF:2381¦TACAAAG¦SOX:2381¦TACAAA¦TCF:2655¦AACAAA¦TCF:2683¦ATCAAA¦TCF:2805¦CTTTGAA¦SOX:2806¦TTTGAA¦TCF:2821¦AACAAAG¦SOX:2821¦AACAAA¦TCF:2857¦TTCAAAG¦SOX:2857¦TTCAAA¦TCF:2979¦TTCAAA¦TCF:3053¦TTCAAA¦TCF:3061¦ATCAATG¦S
BC051193 ovarian zinc finger protein hg17 chr4 47759992 47766056 L1PA6 LINE L1 393¦AACAAAG¦SOX:393¦AACAAA¦TCF:492¦AACAAA¦TCF:847¦AACAAA¦TCF:876¦AACAAA¦TCF:1045¦AACAAA¦TCF:1109¦AACAAA¦TCF:1386¦AACAAAG¦SOX:1386¦AACAAA¦TCF:1542¦TTCAAA¦TCF:1569¦TACAAAG¦SOX:1569¦TACAAA¦TCF:1773¦AACAAA¦TCF:1785¦TTCAATG¦SOX:1981¦ATCAATG¦SOX:2047¦ATCAAA¦TCF:2297¦AACAAAG¦SOX:2297¦AACAAA¦TCF:2304¦ATCAAA¦TCF:2434¦TACAAA¦TCF:2706¦AACAAA¦TCF:2734¦ATCAAA¦TCF:2856¦CTTTGAA¦SOX:2857¦TTTGAA¦TCF:2872¦AACAAAG¦SOX:2872¦AACAAA¦TCF:3030¦TTCAAA¦TCF:3104¦TTCAAA¦TCF:3112¦ATCAATG¦SOX:3136¦TTTGAA¦TCF:3148¦AACAAA¦TCF:3256¦TACAA
AJ421033 TPTE and PTEN homologous inositol lipid hg17 chr13 18968926 18974953 L1PA2 LINE L1 405¦ATCAAA¦TCF:472¦AACAAAG¦SOX:472¦AACAAA¦TCF:572¦AACAAA¦TCF:623¦CTTTGAA¦SOX:624¦TTTGAA¦TCF:825¦AACAAA¦TCF:875¦ATCAAAG¦SOX:875¦ATCAAA¦TCF:998¦AACAAAG¦SOX:998¦AACAAA¦TCF:1053¦ATCAAA¦TCF:1082¦TTCAAA¦TCF:1110¦CTTTGAA¦SOX:1111¦TTTGAA¦TCF:1993¦ATCAAA¦TCF:2048¦ATCAAA¦TCF:2187¦AACAAA¦TCF:2242¦AACAAAG¦SOX:2242¦AACAAA¦TCF:2249¦ATCAAA¦TCF:2379¦TACAAAG¦SOX:2379¦TACAAA¦TCF:2653¦AACAAA¦TCF:2681¦ATCAAA¦TCF:2803¦CTTTGAA¦SOX:2804¦TTTGAA¦TCF:2819¦AACAAAG¦SOX:2819¦AACAAA¦TCF:2855¦TTCAAAG¦SOX:2855¦TTCAAA¦TCF:2977¦TTCAAA¦TCF
BC008909 pleckstrin homology domain interacting protein hg17 chr6 79737951 79743965 L1PA3 LINE L1 234¦ATCAAAG¦SOX:234¦ATCAAA¦TCF:471¦AACAAAG¦SOX:471¦AACAAA¦TCF:571¦AACAAA¦TCF:622¦CTTTGAA¦SOX:623¦TTTGAA¦TCF:824¦AACAAA¦TCF:846¦ATCAAA¦TCF:874¦ATCAAAG¦SOX:874¦ATCAAA¦TCF:997¦AACAAAG¦SOX:997¦AACAAA¦TCF:1019¦CTTTGAT¦SOX:1020¦TTTGAT¦TCF:1052¦ATCAAA¦TCF:1081¦TTCAAA¦TCF:1109¦CTTTGAA¦SOX:1110¦TTTGAA¦TCF:1993¦ATCAAA¦TCF:2187¦AACAAA¦TCF:2240¦AACAAAG¦SOX:2240¦AACAAA¦TCF:2247¦ATCAAA¦TCF:2377¦TACAAAG¦SOX:2377¦TACAAA¦TCF:2651¦AACAAA¦TCF:2679¦ATCAAA¦TCF:2801¦CTTTGAA¦SOX:2802¦TTTGAA¦TCF:2817¦AACAAAG¦SOX:2817¦AACAAA¦TCF:
AK096822 zinc finger protein 533 hg17 chr2 180442169 180448332 L1PA5 LINE L1 395¦ATCAAA¦TCF:462¦AACAAAG¦SOX:462¦AACAAA¦TCF:562¦AACAAA¦TCF:612¦CTTTGAA¦SOX:613¦TTTGAA¦TCF:934¦AACAAA¦TCF:984¦ATCAAAG¦SOX:984¦ATCAAA¦TCF:1107¦AACAAAG¦SOX:1107¦AACAAA¦TCF:1191¦TTCAAA¦TCF:1199¦CATTGTA¦SOX:1364¦CATTGAA¦SOX:1372¦ATCAAA¦TCF:1423¦AACAAA¦TCF:1427¦AACAAAG¦SOX:1427¦AACAAA¦TCF:1476¦TTTGAT¦TCF:1583¦TTCAAA¦TCF:1993¦TACAAA¦TCF:2134¦ATCAAA¦TCF:2383¦AACAAAG¦SOX:2383¦AACAAA¦TCF:2390¦ATCAAA¦TCF:2520¦TACAAAG¦SOX:2520¦TACAAA¦TCF:2590¦ATCAATG¦SOX:2794¦AACAAA¦TCF:2822¦ATCAAA¦TCF:2944¦CTTTGAA¦SOX:2945¦TTTGAA¦
AY244357 collagen, type XXIV, alpha 1 hg17 chr1 86340064 86346193 L1PA5 LINE L1 471¦AACAAAG¦SOX:471¦AACAAA¦TCF:571¦AACAAA¦TCF:621¦CTTTGAA¦SOX:622¦TTTGAA¦TCF:942¦AACAAA¦TCF:992¦ATCAAAG¦SOX:992¦ATCAAA¦TCF:1116¦AACAAAG¦SOX:1116¦AACAAA¦TCF:1171¦ATCAAA¦TCF:1200¦TTCAAA¦TCF:1355¦TTTGAT¦TCF:1392¦ATCAAA¦TCF:1452¦AACAAAG¦SOX:1452¦AACAAA¦TCF:1924¦AACAAA¦TCF:2114¦ATCAAA¦TCF:2308¦AACAAA¦TCF:2363¦AACAAAG¦SOX:2363¦AACAAA¦TCF:2370¦ATCAAA¦TCF:2500¦TACAAAG¦SOX:2500¦TACAAA¦TCF:2802¦ATCAAA¦TCF:2940¦AACAAAG¦SOX:2940¦AACAAA¦TCF:3098¦TTCAAA¦TCF:3171¦TTCAAA¦TCF:3179¦ATCAATG¦SOX:3203¦TTTGAA¦TCF:3267¦ATCAAA¦T
BC048324 hemogen hg17 chr9 97787201 97793349 L1PA6 LINE L1 551¦AACAAA¦TCF:923¦AACAAA¦TCF:998¦ATCAAAG¦SOX:998¦ATCAAA¦TCF:1121¦AACAAAG¦SOX:1121¦AACAAA¦TCF:1143¦CTTTGAT¦SOX:1144¦TTTGAT¦TCF:1185¦AACAAA¦TCF:1214¦TTTGAA¦TCF:1369¦TTTGAT¦TCF:1406¦ATCAAA¦TCF:1461¦AACAAAG¦SOX:1461¦AACAAA¦TCF:1510¦TTTGAT¦TCF:1617¦TTCAAA¦TCF:2055¦ATCAATG¦SOX:2121¦ATCAAA¦TCF:2379¦AACAAAG¦SOX:2379¦AACAAA¦TCF:2386¦ATCAAA¦TCF:2818¦ATCAAA¦TCF:2940¦CTTTGAA¦SOX:2941¦TTTGAA¦TCF:2956¦AACAAAG¦SOX:2956¦AACAAA¦TCF:3108¦AACAAA¦TCF:3114¦TTCAAA¦TCF:3196¦TTCAAA¦TCF:3204¦ATCAATG¦SOX:3241¦AACAAA¦TCF:3291¦ATCA
AF279784 organic anion transporting polypeptide A isoform hg17 chr12 21439210 21445240 L1PA2 LINE L1 405¦ATCAAA¦TCF:472¦AACAAAG¦SOX:472¦AACAAA¦TCF:572¦AACAAA¦TCF:623¦CTTTGAA¦SOX:624¦TTTGAA¦TCF:825¦AACAAA¦TCF:875¦ATCAAAG¦SOX:875¦ATCAAA¦TCF:998¦AACAAAG¦SOX:998¦AACAAA¦TCF:1053¦ATCAAA¦TCF:1082¦TTCAAA¦TCF:1707¦TTCAAA¦TCF:1804¦AACAAA¦TCF:1994¦ATCAAA¦TCF:2188¦AACAAA¦TCF:2243¦AACAAAG¦SOX:2243¦AACAAA¦TCF:2250¦ATCAAA¦TCF:2380¦TACAAAG¦SOX:2380¦TACAAA¦TCF:2654¦AACAAA¦TCF:2682¦ATCAAA¦TCF:2804¦CTTTGAA¦SOX:2805¦TTTGAA¦TCF:2820¦AACAAAG¦SOX:2820¦AACAAA¦TCF:2856¦TTCAAAG¦SOX:2856¦TTCAAA¦TCF:2978¦TTCAAA¦TCF:3052¦TTCAAA¦TCF:
BC000088 glutathione S-transferase M3 hg17 chr1 109997444 110003605 L1PA4 LINE L1 401¦ATCAAA¦TCF:468¦AACAAAG¦SOX:468¦AACAAA¦TCF:568¦AACAAA¦TCF:959¦AACAAA¦TCF:1009¦ATCAAAG¦SOX:1009¦ATCAAA¦TCF:1132¦AACAAAG¦SOX:1132¦AACAAA¦TCF:1187¦ATCAAA¦TCF:1216¦TTCAAA¦TCF:1244¦CTTTGAA¦SOX:1245¦TTTGAA¦TCF:1468¦AACAAAG¦SOX:1468¦AACAAA¦TCF:2285¦AACAAAG¦SOX:2285¦AACAAA¦TCF:2323¦AACAAA¦TCF:2378¦AACAAAG¦SOX:2378¦AACAAA¦TCF:2385¦ATCAAA¦TCF:2514¦TACAAAG¦SOX:2514¦TACAAA¦TCF:2788¦AACAAA¦TCF:2938¦CTTTGAA¦SOX:2939¦TTTGAA¦TCF:2954¦AACAAAG¦SOX:2954¦AACAAA¦TCF:2990¦TTCAAAG¦SOX:2990¦TTCAAA¦TCF:3112¦TTCAAA¦TCF:3186¦TTC
AK001823 guanylate binding protein 3 hg17 chr1 89206237 89212388 L1PA6 LINE L1 450¦AACAAAG¦SOX:450¦AACAAA¦TCF:518¦AACAAA¦TCF:602¦TTTGAA¦TCF:891¦ATCAAA¦TCF:992¦ATCAAAG¦SOX:992¦ATCAAA¦TCF:1115¦AACAAAG¦SOX:1115¦AACAAA¦TCF:1179¦AACAAA¦TCF:1363¦TTTGAT¦TCF:1400¦ATCAAA¦TCF:1460¦AACAATG¦SOX:1497¦ATCAAA¦TCF:1509¦TTTGAT¦TCF:1616¦TTCAAA¦TCF:2053¦ATCAATG¦SOX:2367¦AACAAAG¦SOX:2367¦AACAAA¦TCF:2374¦ATCAAA¦TCF:2420¦TTCAAA¦TCF:2504¦TACAAAG¦SOX:2504¦TACAAA¦TCF:2574¦ATCAATG¦SOX:2778¦AACAAA¦TCF:2806¦ATCAAA¦TCF:2899¦AACAAA¦TCF:2928¦CTTTGAA¦SOX:2929¦TTTGAA¦TCF:2944¦AACAAAG¦SOX:2944¦AACAAA¦TCF:3102¦TTCAAA
AF081459 origin recognition complex subunit 5 isoform 2 hg17 chr7 103444135 103450288 L1PA3 LINE L1 399¦ATCAAA¦TCF:466¦AACAAAG¦SOX:466¦AACAAA¦TCF:566¦AACAAA¦TCF:617¦CTTTGAA¦SOX:618¦TTTGAA¦TCF:947¦AACAAA¦TCF:997¦ATCAAAG¦SOX:997¦ATCAAA¦TCF:1120¦AACAAAG¦SOX:1120¦AACAAA¦TCF:1175¦ATCAAA¦TCF:1204¦TTCAAA¦TCF:1232¦CTTTGAA¦SOX:1233¦TTTGAA¦TCF:1456¦AACAAAG¦SOX:1456¦AACAAA¦TCF:1752¦AACAAAG¦SOX:1752¦AACAAA¦TCF:2126¦ATCAAA¦TCF:2375¦AACAAAG¦SOX:2375¦AACAAA¦TCF:2382¦ATCAAA¦TCF:2786¦AACAAA¦TCF:2814¦ATCAAA¦TCF:2936¦CTTTGAA¦SOX:2937¦TTTGAA¦TCF:2988¦TTCAAAG¦SOX:2988¦TTCAAA¦TCF:3110¦TTCAAA¦TCF:3184¦TTCAAA¦TCF:3216¦TTTGAA¦T
BC065516 mitogen-activated protein kinase 10 isoform 2 hg17 chr4 87387565 87393806 L1PA10 LINE L1 474¦TTTGAA¦TCF:1060¦AACAAA¦TCF:1108¦ATCAAAG¦SOX:1108¦ATCAAA¦TCF:1134¦TTTGAA¦TCF:1143¦ATCAATG¦SOX:1271¦TTCAAA¦TCF:1569¦AACAAA¦TCF:1674¦TTCAAA¦TCF:1725¦TTCAAA¦TCF:1793¦ATCAAA¦TCF:1862¦TACAAAG¦SOX:1862¦TACAAA¦TCF:2133¦TACAAA¦TCF:2227¦ATCAAA¦TCF:2475¦AACAAAG¦SOX:2475¦AACAAA¦TCF:2615¦TTCAAAG¦SOX:2615¦TTCAAA¦TCF:2703¦AACAAAG¦SOX:2703¦AACAAA¦TCF:2887¦AACAAA¦TCF:2915¦ATCAAAG¦SOX:2915¦ATCAAA¦TCF:3037¦CTTTGAA¦SOX:3038¦TTTGAA¦TCF:3053¦AACAAAG¦SOX:3053¦AACAAA¦TCF:3133¦CTTTGAA¦SOX:3134¦TTTGAA¦TCF:3205¦AACAAA¦TCF:3294¦
AY035376 peptidoglycan recognition protein-I-alpha hg17 chr1 150099810 150106115 L1PA6 LINE L1 602¦AACAAA¦TCF:1050¦AACAAA¦TCF:1079¦AACAAA¦TCF:1125¦ATCAAAG¦SOX:1125¦ATCAAA¦TCF:1245¦AACAAA¦TCF:1268¦TTTGAT¦TCF:1309¦AACAAA¦TCF:1472¦TACAAA¦TCF:1493¦TTTGAT¦TCF:1529¦ATCAAA¦TCF:1589¦AACAAAG¦SOX:1589¦AACAAA¦TCF:1638¦TTTGAT¦TCF:1745¦TTCAAA¦TCF:2275¦ATCAAA¦TCF:2374¦ATCAATG¦SOX:2525¦AACAAAG¦SOX:2525¦AACAAA¦TCF:2532¦ATCAAA¦TCF:2662¦TACAAAG¦SOX:2662¦TACAAA¦TCF:2940¦AACAAA¦TCF:2968¦ATCAAA¦TCF:3090¦CTTTGAA¦SOX:3091¦TTTGAA¦TCF:3106¦AACAAAG¦SOX:3106¦AACAAA¦TCF:3337¦TTCAAA¦TCF:3345¦ATCAATG¦SOX:3369¦TTTGAA¦TCF:3381¦AA
BC054878 solute carrier organic anion transporter family, hg17 chr12 21176035 21182186 L1PA4 LINE L1 405¦ATCAAA¦TCF:466¦TTTGAT¦TCF:478¦AACAAAG¦SOX:478¦AACAAA¦TCF:578¦AACAAA¦TCF:629¦CTTTGAA¦SOX:630¦TTTGAA¦TCF:952¦AACAAA¦TCF:1002¦ATCAAAG¦SOX:1002¦ATCAAA¦TCF:1125¦AACAAAG¦SOX:1125¦AACAAA¦TCF:1180¦ATCAAA¦TCF:1209¦TTCAAA¦TCF:1237¦CTTTGAA¦SOX:1238¦TTTGAA¦TCF:1461¦AACAAAG¦SOX:1461¦AACAAA¦TCF:1912¦AACAAA¦TCF:2118¦ATCAAA¦TCF:2312¦AACAAA¦TCF:2367¦AACAAAG¦SOX:2367¦AACAAA¦TCF:2374¦ATCAAA¦TCF:2504¦TACAAAG¦SOX:2504¦TACAAA¦TCF:2574¦ATCAATG¦SOX:2778¦AACAAA¦TCF:2806¦ATCAAA¦TCF:2928¦CTTTGAA¦SOX:2929¦TTTGAA¦TCF:2944¦AACAAA¦
AK125777 - hg17 chr2 65029808 65035860 L1PA5 LINE L1 469¦AACAAAG¦SOX:469¦AACAAA¦TCF:569¦AACAAA¦TCF:619¦CTTTGAA¦SOX:620¦TTTGAA¦TCF:636¦TTCAAAG¦SOX:636¦TTCAAA¦TCF:947¦AACAAA¦TCF:994¦ATCAAAG¦SOX:994¦ATCAAA¦TCF:1117¦AACAAAG¦SOX:1117¦AACAAA¦TCF:1396¦ATCAAA¦TCF:1448¦AACAAA¦TCF:1452¦AACAAA¦TCF:1456¦AACAAAG¦SOX:1456¦AACAAA¦TCF:1612¦TTCAAA¦TCF:1925¦AACAAA¦TCF:2115¦ATCAAA¦TCF:2309¦AACAAA¦TCF:2364¦AACAAAG¦SOX:2364¦AACAAA¦TCF:2501¦TACAAAG¦SOX:2501¦TACAAA¦TCF:2797¦ATCAAA¦TCF:2918¦CTTTGAA¦SOX:2919¦TTTGAA¦TCF:2934¦AACAAAG¦SOX:2934¦AACAAA¦TCF:3092¦TTCAAA¦TCF:3166¦TTCAAA¦TC
AF119862 - hg17 chr1 50172322 50178703 L1PB1 LINE L1 127¦CTTTGAA¦SOX:128¦TTTGAA¦TCF:378¦CATTGTT¦SOX:468¦CTTTGTA¦SOX:469¦TTTGTA¦TCF:1394¦ATCAAAG¦SOX:1394¦ATCAAA¦TCF:1570¦ATCAAA¦TCF:1813¦ATCAAA¦TCF:1864¦ATCAAA¦TCF:1873¦AACAATG¦SOX:1906¦AACAAAG¦SOX:1906¦AACAAA¦TCF:2314¦TTTGTA¦TCF:2391¦ATCAAA¦TCF:2404¦TACAAA¦TCF:2585¦CATTGAA¦SOX:2844¦AACAATG¦SOX:3032¦AACAAAG¦SOX:3032¦AACAAA¦TCF:3040¦AACAATG¦SOX:3066¦AACAAA¦TCF:3206¦ATCAAA¦TCF:3336¦AACAATG¦SOX:3490¦AACAAA¦TCF:3513¦AACAAA¦TCF:3528¦CTTTGAA¦SOX:3529¦TTTGAA¦TCF:3646¦TACAAA¦TCF:3687¦TACAAA¦TCF:3824¦AACAAA¦TCF:3877¦TT
BX161415 - hg17 chr14 37305752 37311787 L1PA3 LINE L1 405¦ATCAAA¦TCF:472¦AACAAAG¦SOX:472¦AACAAA¦TCF:623¦CTTTGAA¦SOX:624¦TTTGAA¦TCF:825¦AACAAA¦TCF:875¦ATCAAAG¦SOX:875¦ATCAAA¦TCF:998¦AACAAAG¦SOX:998¦AACAAA¦TCF:1053¦ATCAAA¦TCF:1082¦TTCAAA¦TCF:1110¦CTTTGAA¦SOX:1111¦TTTGAA¦TCF:1995¦ATCAAA¦TCF:2189¦AACAAA¦TCF:2244¦AACAAAG¦SOX:2244¦AACAAA¦TCF:2251¦ATCAAA¦TCF:2381¦TACAAAG¦SOX:2381¦TACAAA¦TCF:2451¦TTCAATG¦SOX:2655¦AACAAA¦TCF:2683¦ATCAAA¦TCF:2805¦CTTTGAA¦SOX:2806¦TTTGAA¦TCF:2821¦AACAAAG¦SOX:2821¦AACAAA¦TCF:2857¦TTCAAAG¦SOX:2857¦TTCAAA¦TCF:2920¦TTCAAA¦TCF:2979¦TTCAAA¦T
AK095757 - hg17 chr5 131401320 131408255 L1PA13 LINE L1 847¦TTTGAA¦TCF:931¦AACAAAG¦SOX:931¦AACAAA¦TCF:1130¦TTTGAA¦TCF:1222¦TTCAAA¦TCF:1389¦TTTGAA¦TCF:1818¦AACAAA¦TCF:2462¦ATCAAA¦TCF:2680¦AACAAA¦TCF:2854¦TACAAA¦TCF:2948¦ATCAAA¦TCF:3142¦AACAAA¦TCF:3195¦AACAAAG¦SOX:3195¦AACAAA¦TCF:3202¦ATCAAAG¦SOX:3202¦ATCAAA¦TCF:3243¦TTTGAT¦TCF:3334¦TTCAAAG¦SOX:3334¦TTCAAA¦TCF:3424¦AACAAAG¦SOX:3424¦AACAAA¦TCF:3609¦AACAAA¦TCF:3637¦ATCAAA¦TCF:3759¦CTTTGAA¦SOX:3760¦TTTGAA¦TCF:3765¦AACAAAG¦SOX:3765¦AACAAA¦TCF:3831¦ATCAAA¦TCF:3902¦AACAAA¦TCF:4080¦TTCAAA¦TCF:4367¦TACAAAG¦SOX:4367¦TACA
BC042665 CD80 antigen (CD28 antigen ligand 1, B7-1 hg17 chr3 120764717 120770854 L1PA5 LINE L1 466¦AACAAAG¦SOX:466¦AACAAA¦TCF:566¦AACAAA¦TCF:939¦AACAAA¦TCF:978¦ATCAAAG¦SOX:978¦ATCAAA¦TCF:994¦ATCAAAG¦SOX:994¦ATCAAA¦TCF:1117¦AACAAAG¦SOX:1117¦AACAAA¦TCF:1139¦CTTTGAT¦SOX:1140¦TTTGAT¦TCF:1172¦ATCAAA¦TCF:1201¦TTTGAA¦TCF:1453¦AACAAAG¦SOX:1453¦AACAAA¦TCF:1609¦TTCAAA¦TCF:2048¦CATTGAT¦SOX:2115¦ATCAAA¦TCF:2307¦AACAAA¦TCF:2362¦AACAAAG¦SOX:2362¦AACAAA¦TCF:2369¦ATCAAA¦TCF:2499¦TACAAAG¦SOX:2499¦TACAAA¦TCF:2801¦ATCAAA¦TCF:2894¦AACAAA¦TCF:2923¦CTTTGAA¦SOX:2924¦TTTGAA¦TCF:2939¦AACAAAG¦SOX:2939¦AACAAA¦TCF:3097¦TTCAAA
BC032824 hypothetical protein DKFZp586E1923 hg17 chr6 88089715 88095715 L1PA3 LINE L1 404¦ATCAAA¦TCF:471¦AACAAAG¦SOX:471¦AACAAA¦TCF:571¦AACAAA¦TCF:622¦CTTTGAA¦SOX:623¦TTTGAA¦TCF:824¦AACAAA¦TCF:874¦AACAAAG¦SOX:874¦AACAAA¦TCF:997¦AACAAAG¦SOX:997¦AACAAA¦TCF:1049¦ATCAAA¦TCF:1078¦TTCAAA¦TCF:1106¦CTTTGAA¦SOX:1107¦TTTGAA¦TCF:1978¦ATCAAA¦TCF:2172¦AACAAA¦TCF:2227¦AACAAAG¦SOX:2227¦AACAAA¦TCF:2234¦ATCAAA¦TCF:2364¦TACAAAG¦SOX:2364¦TACAAA¦TCF:2638¦AACAAA¦TCF:2666¦ATCAAA¦TCF:2788¦CTTTGAA¦SOX:2789¦TTTGAA¦TCF:2804¦AACAAAG¦SOX:2804¦AACAAA¦TCF:2840¦TTCAAAG¦SOX:2840¦TTCAAA¦TCF:2962¦TTCAAA¦TCF:3036¦TTCAAA¦TCF
AF091606 catenin, alpha 3 hg17 chr10 69129396 69135555 L1PA3 LINE L1 407¦ATCAAA¦TCF:474¦AACAAAG¦SOX:474¦AACAAA¦TCF:574¦AACAAA¦TCF:625¦CTTTGAA¦SOX:626¦TTTGAA¦TCF:955¦AACAAA¦TCF:1005¦ATCAAA¦TCF:1128¦AACAAAG¦SOX:1128¦AACAAA¦TCF:1183¦ATCAAA¦TCF:1212¦TTCAAA¦TCF:1240¦CTTTGAA¦SOX:1241¦TTTGAA¦TCF:2124¦ATCAAA¦TCF:2318¦AACAAA¦TCF:2373¦AACAAAG¦SOX:2373¦AACAAA¦TCF:2380¦ATCAAA¦TCF:2510¦TACAAAG¦SOX:2510¦TACAAA¦TCF:2718¦TTCAAA¦TCF:2784¦AACAAA¦TCF:2812¦ATCAAA¦TCF:2843¦TTCAAA¦TCF:2934¦CTTTGAA¦SOX:2935¦TTTGAA¦TCF:2950¦AACAAAG¦SOX:2950¦AACAAA¦TCF:2986¦TTCAAAG¦SOX:2986¦TTCAAA¦TCF:3049¦TTCAAA¦
AF285592 ferritin, heavy polypeptide-like 17 hg17 chrX 30855091 30861237 L1PA4 LINE L1 383¦CATTGTT¦SOX:406¦ATCAAA¦TCF:473¦AACAAAG¦SOX:473¦AACAAA¦TCF:623¦CTTTGAA¦SOX:624¦TTTGAA¦TCF:942¦AACAAA¦TCF:992¦ATCAAAG¦SOX:992¦ATCAAA¦TCF:1115¦AACAAAG¦SOX:1115¦AACAAA¦TCF:1170¦ATCAAA¦TCF:1264¦ATCAATG¦SOX:1391¦ATCAAA¦TCF:1451¦AACAAAG¦SOX:1451¦AACAAA¦TCF:1607¦TTCAAA¦TCF:2112¦ATCAAA¦TCF:2306¦AACAAA¦TCF:2361¦AACAAAG¦SOX:2361¦AACAAA¦TCF:2368¦ATCAAA¦TCF:2498¦TACAAAG¦SOX:2498¦TACAAA¦TCF:2772¦AACAAA¦TCF:2800¦ATCAAA¦TCF:2893¦AACAAA¦TCF:2922¦CTTTGAA¦SOX:2923¦TTTGAA¦TCF:2938¦AACAAAG¦SOX:2938¦AACAAA¦TCF:2974¦TTCAAAG
AK026210 chromosome 15 open reading frame 29 hg17 chr15 32245457 32251584 L1PA6 LINE L1 455¦AACAAAG¦SOX:455¦AACAAA¦TCF:555¦AACAAA¦TCF:911¦AACAAA¦TCF:940¦AACAAA¦TCF:986¦ATCAAA¦TCF:1050¦TTCAAA¦TCF:1109¦AACAAA¦TCF:1173¦AACAAA¦TCF:1357¦TTTGAT¦TCF:1394¦ATCAAA¦TCF:1454¦AACAAAG¦SOX:1454¦AACAAA¦TCF:1503¦TTTGAT¦TCF:1608¦TTCAAA¦TCF:2105¦ATCAAA¦TCF:2256¦TTCAAA¦TCF:2354¦AACAAAG¦SOX:2354¦AACAAA¦TCF:2361¦ATCAAA¦TCF:2491¦TACAAAG¦SOX:2491¦TACAAA¦TCF:2519¦AACAATG¦SOX:2597¦TTTGAA¦TCF:2793¦ATCAAA¦TCF:2915¦TTTGAA¦TCF:2930¦AACAAAG¦SOX:2930¦AACAAA¦TCF:3055¦ATCAAA¦TCF:3082¦AACAAA¦TCF:3088¦TTCAAA¦TCF:3161¦TTCAAA¦TC
AK055595 - hg17 chr4 169737870 169743919 L1PA2 LINE L1 406¦ATCAAA¦TCF:496¦AACAAAG¦SOX:496¦AACAAA¦TCF:647¦CTTTGAA¦SOX:648¦TTTGAA¦TCF:849¦AACAAA¦TCF:899¦ATCAAAG¦SOX:899¦ATCAAA¦TCF:1022¦AACAAAG¦SOX:1022¦AACAAA¦TCF:1044¦CTTTGAT¦SOX:1045¦TTTGAT¦TCF:1077¦ATCAAA¦TCF:1106¦TTCAAA¦TCF:1134¦CTTTGAA¦SOX:1135¦TTTGAA¦TCF:1601¦TTCAAA¦TCF:2019¦ATCAAA¦TCF:2213¦AACAAA¦TCF:2268¦AACAAAG¦SOX:2268¦AACAAA¦TCF:2275¦ATCAAA¦TCF:2405¦TACAAAG¦SOX:2405¦TACAAA¦TCF:2679¦AACAAA¦TCF:2707¦ATCAAA¦TCF:2829¦CTTTGAA¦SOX:2830¦TTTGAA¦TCF:2845¦AACAAAG¦SOX:2845¦AACAAA¦TCF:2881¦TTCAAAG¦SOX:2881¦TTCAAA
BC068561 solute carrier family 25 member 24 isoform 1 hg17 chr1 108458092 108464560 L1PA7 LINE L1 286¦TTCAAA¦TCF:342¦TTTGAA¦TCF:677¦TTTGAA¦TCF:1106¦CTTTGTT¦SOX:1107¦TTTGTT¦TCF:1221¦AACAAA¦TCF:1250¦AACAAA¦TCF:1313¦ATCAAAG¦SOX:1313¦ATCAAA¦TCF:1320¦ATCAAAG¦SOX:1320¦ATCAAA¦TCF:1377¦TTTGAA¦TCF:1436¦AACAAA¦TCF:1459¦TTTGAT¦TCF:1500¦AACAAA¦TCF:1776¦AACAAA¦TCF:1825¦TTTGAT¦TCF:1931¦TTCAAA¦TCF:2391¦ATCAAA¦TCF:2435¦ATCAAA¦TCF:2681¦AACAAA¦TCF:2696¦AACAAAG¦SOX:2696¦AACAAA¦TCF:2703¦ATCAAA¦TCF:2833¦TACAAA¦TCF:2903¦ATCAATG¦SOX:3162¦TTCAAA¦TCF:3224¦AACAAA¦TCF:3252¦CTTTGAA¦SOX:3253¦TTTGAA¦TCF:3268¦AACAAAG¦SOX:3268¦AACAA
AY358110 - hg17 chr3 194618838 194626507 L1MA6 LINE L1 76¦TTTGAT¦TCF:112¦ATCAAAG¦SOX:112¦ATCAAA¦TCF:1001¦AACAATG¦SOX:1268¦ATCAATG¦SOX:1923¦CATTGAT¦SOX:1947¦TACAAAG¦SOX:1947¦TACAAA¦TCF:2083¦CATTGAT¦SOX:2095¦AACAAA¦TCF:2135¦AACAAAG¦SOX:2135¦AACAAA¦TCF:2348¦AACAAAG¦SOX:2348¦AACAAA¦TCF:2497¦TTTGAA¦TCF:2545¦AACAAAG¦SOX:2545¦AACAAA¦TCF:2586¦ATCAAA¦TCF:2637¦AACAAA¦TCF:3097¦TACAAA¦TCF:3259¦CATTGTT¦SOX:3341¦TTTGTA¦TCF:3424¦TACAAAG¦SOX:3424¦TACAAA¦TCF:3472¦ATCAAA¦TCF:3503¦ATCAAAG¦SOX:3503¦ATCAAA¦TCF:3533¦AACAAA¦TCF:3544¦TACAAA¦TCF:3556¦ATCAAA¦TCF:3563¦AACAAAG¦SOX:3563¦
AL133606 WD repeat domain 52 hg17 chr3 114568130 114574277 L1PA6 LINE L1 278¦TTCAAA¦TCF:450¦AACAAAG¦SOX:450¦AACAAA¦TCF:549¦AACAAA¦TCF:919¦AACAAA¦TCF:948¦AACAAA¦TCF:994¦ATCAAAG¦SOX:994¦ATCAAA¦TCF:1117¦AACAAAG¦SOX:1117¦AACAAA¦TCF:1140¦TTTGAT¦TCF:1185¦AACAAA¦TCF:1407¦ATCAAA¦TCF:1467¦AACAAAG¦SOX:1467¦AACAAA¦TCF:1516¦TTTGAT¦TCF:2128¦ATCAAA¦TCF:2192¦TACAAA¦TCF:2376¦AACAAAG¦SOX:2376¦AACAAA¦TCF:2383¦ATCAAA¦TCF:2510¦TACAAAG¦SOX:2510¦TACAAA¦TCF:2804¦ATCAAA¦TCF:2896¦AACAAA¦TCF:2925¦CTTTGAA¦SOX:2926¦TTTGAA¦TCF:3093¦AACAAA¦TCF:3099¦TTCAAA¦TCF:3172¦TTCAAA¦TCF:3180¦ATCAATG¦SOX:3270¦ATCAAA¦TC
BC060840 N-ethylmaleimide-sensitive factor attachment hg17 chr20 23354745 23360777 L1HS LINE L1 404¦ATCAAA¦TCF:471¦AACAAAG¦SOX:471¦AACAAA¦TCF:571¦AACAAA¦TCF:622¦CTTTGAA¦SOX:623¦TTTGAA¦TCF:874¦ATCAAAG¦SOX:874¦ATCAAA¦TCF:997¦AACAAAG¦SOX:997¦AACAAA¦TCF:1052¦ATCAAA¦TCF:1081¦TTCAAA¦TCF:1109¦CTTTGAA¦SOX:1110¦TTTGAA¦TCF:1994¦ATCAAA¦TCF:2188¦AACAAA¦TCF:2243¦AACAAAG¦SOX:2243¦AACAAA¦TCF:2250¦ATCAAA¦TCF:2380¦TACAAAG¦SOX:2380¦TACAAA¦TCF:2655¦AACAAA¦TCF:2683¦ATCAAA¦TCF:2805¦CTTTGAA¦SOX:2806¦TTTGAA¦TCF:2821¦AACAAAG¦SOX:2821¦AACAAA¦TCF:2857¦TTCAAAG¦SOX:2857¦TTCAAA¦TCF:2979¦TTCAAA¦TCF:3053¦TTCAAA¦TCF:3061¦ATCAATG¦S
BX248259 - hg17 chr14 93989151 93995655 L1PB1 LINE L1 66¦CTTTGAA¦SOX:67¦TTTGAA¦TCF:79¦TTCAAAG¦SOX:79¦TTCAAA¦TCF:677¦AACAAA¦TCF:1108¦AACAAA¦TCF:1516¦AACAAA¦TCF:1751¦ATCAAAG¦SOX:1751¦ATCAAA¦TCF:1796¦TTCAAAG¦SOX:1796¦TTCAAA¦TCF:1814¦AACAAAG¦SOX:1814¦AACAAA¦TCF:1848¦AACAAAG¦SOX:1848¦AACAAA¦TCF:2237¦AACAAA¦TCF:2262¦TTTGTA¦TCF:2321¦AACAAA¦TCF:2394¦AACAAA¦TCF:2458¦AACAAA¦TCF:2749¦AACAAA¦TCF:2998¦AACAATG¦SOX:3024¦AACAAA¦TCF:3146¦ATCAATG¦SOX:3234¦TTCAAA¦TCF:3258¦AACAAA¦TCF:3293¦AACAATG¦SOX:3326¦TTTGAA¦TCF:3357¦ATCAAA¦TCF:3422¦ATCAAA¦TCF:3494¦AACAAA¦TCF:3566¦AACAAA¦TC
BC005235 nuclear DNA-binding protein hg17 chr2 68202566 68208679 L1PA5 LINE L1 381¦ATCAAA¦TCF:448¦AACAAAG¦SOX:448¦AACAAA¦TCF:548¦AACAAA¦TCF:596¦CTTTGAA¦SOX:597¦TTTGAA¦TCF:919¦AACAAA¦TCF:969¦ATCAAAG¦SOX:969¦ATCAAA¦TCF:1092¦AACAAA¦TCF:1156¦AACAAA¦TCF:1185¦TTTGAA¦TCF:1339¦TTTGAT¦TCF:1376¦ATCAAA¦TCF:1436¦AACAAAG¦SOX:1436¦AACAAA¦TCF:2024¦ATCAATG¦SOX:2090¦ATCAAA¦TCF:2283¦AACAAA¦TCF:2338¦AACAAAG¦SOX:2338¦AACAAA¦TCF:2345¦ATCAAA¦TCF:2749¦AACAAA¦TCF:2777¦ATCAAA¦TCF:2870¦AACAAA¦TCF:2900¦TTTGAA¦TCF:2915¦AACAAAG¦SOX:2915¦AACAAA¦TCF:3073¦TTCAAA¦TCF:3135¦AACAAA¦TCF:3147¦TTCAAA¦TCF:3155¦ATCAATG¦SOX
BC067298 RAS guanyl releasing protein 1 hg17 chr15 36647119 36653516 L1PA7 LINE L1 1084¦CTTTGTT¦SOX:1085¦TTTGTT¦TCF:1199¦AACAAAG¦SOX:1199¦AACAAA¦TCF:1228¦AACAAA¦TCF:1274¦ATCAAAG¦SOX:1274¦ATCAAA¦TCF:1396¦AACAAA¦TCF:1460¦AACAAA¦TCF:1741¦AACAAAG¦SOX:1741¦AACAAA¦TCF:1790¦TTTGAT¦TCF:2384¦ATCAAA¦TCF:2561¦TACAAAG¦SOX:2561¦TACAAA¦TCF:2632¦AACAAAG¦SOX:2632¦AACAAA¦TCF:2639¦ATCAAA¦TCF:2680¦ATCAATG¦SOX:2767¦TACAAAG¦SOX:2767¦TACAAA¦TCF:3041¦AACAAA¦TCF:3069¦ATCAAA¦TCF:3207¦AACAAAG¦SOX:3207¦AACAAA¦TCF:3359¦AACAAA¦TCF:3392¦AACAAAG¦SOX:3392¦AACAAA¦TCF:3444¦TTCAAA¦TCF:3452¦ATCAATG¦SOX:3476¦TTTGAA¦TCF:348
AF242528 zinc finger protein 291 hg17 chr15 74966582 74972732 L1PA6 LINE L1 448¦AACAAAG¦SOX:448¦AACAAA¦TCF:549¦AACAAA¦TCF:757¦AACAAAG¦SOX:757¦AACAAA¦TCF:922¦AACAAA¦TCF:997¦ATCAAAG¦SOX:997¦ATCAAA¦TCF:1088¦TTCAAAG¦SOX:1088¦TTCAAA¦TCF:1120¦AACAAAG¦SOX:1120¦AACAAA¦TCF:1178¦AACAAA¦TCF:1400¦ATCAAA¦TCF:1462¦AACAAAG¦SOX:1462¦AACAAA¦TCF:1617¦TTCAAA¦TCF:1949¦TTTGTT¦TCF:2119¦ATCAAA¦TCF:2357¦TTCAAA¦TCF:2372¦ATCAAA¦TCF:2421¦AACAAA¦TCF:2501¦TACAAAG¦SOX:2501¦TACAAA¦TCF:2799¦ATCAAA¦TCF:2921¦CTTTGAA¦SOX:2922¦TTTGAA¦TCF:2928¦ATCAATG¦SOX:2937¦AACAAAG¦SOX:2937¦AACAAA¦TCF:3095¦TTCAAA¦TCF:3169¦TTCAAA¦
AK000177 - hg17 chr6 119244988 119251416 L1PA8 LINE L1 1227¦AACAAA¦TCF:1279¦ATCAAAG¦SOX:1279¦ATCAAA¦TCF:1357¦TTCAAA¦TCF:1453¦AACAAA¦TCF:1892¦TTCAAA¦TCF:2032¦TACAAAG¦SOX:2032¦TACAAA¦TCF:2110¦TTCAAA¦TCF:2221¦TTTGTA¦TCF:2300¦TACAAA¦TCF:2644¦AACAAAG¦SOX:2644¦AACAAA¦TCF:2651¦ATCAAA¦TCF:2692¦ATCAATG¦SOX:2781¦TTCAAAG¦SOX:2781¦TTCAAA¦TCF:3083¦ATCAAA¦TCF:3205¦CTTTGAA¦SOX:3206¦TTTGAA¦TCF:3221¦AACAAAG¦SOX:3221¦AACAAA¦TCF:3369¦AACAAA¦TCF:3373¦AACAAA¦TCF:3379¦TTCAAA¦TCF:3453¦TTCAAA¦TCF:3485¦TTTGAA¦TCF:3497¦AACAAA¦TCF:3549¦ATCAAA¦TCF:3607¦TACAAA¦TCF:3837¦TACAAAG¦SOX:3837¦T
BC064574 hypothetical protein LOC150763 hg17 chr2 96127583 96133724 L1PA6 LINE L1 456¦AACAAAG¦SOX:456¦AACAAA¦TCF:555¦AACAAA¦TCF:941¦AACAAA¦TCF:987¦ATCAAAG¦SOX:987¦ATCAAA¦TCF:1012¦AACAAA¦TCF:1107¦AACAAA¦TCF:1171¦AACAAA¦TCF:1446¦AACAAAG¦SOX:1446¦AACAAA¦TCF:1495¦TTTGAT¦TCF:1602¦TTCAAA¦TCF:2036¦CATTGAT¦SOX:2103¦ATCAAA¦TCF:2352¦AACAAA¦TCF:2359¦ATCAAA¦TCF:2490¦TACAAAG¦SOX:2490¦TACAAA¦TCF:2560¦ATCAATG¦SOX:2764¦AACAAA¦TCF:2792¦ATCAAA¦TCF:2914¦CTTTGAA¦SOX:2915¦TTTGAA¦TCF:2930¦AACAAAG¦SOX:2930¦AACAAA¦TCF:3087¦TTCAAA¦TCF:3107¦AACAAA¦TCF:3169¦ATCAATG¦SOX:3253¦ATCAAA¦TCF:3310¦TACAAA¦TCF:3484¦TACAAA
AK075391 hypothetical protein DKFZp564K0822 hg17 chr7 55419090 55425219 L1PA5 LINE L1 547¦AACAAAG¦SOX:547¦AACAAA¦TCF:597¦CTTTGAA¦SOX:598¦TTTGAA¦TCF:920¦AACAAA¦TCF:1091¦AACAAAG¦SOX:1091¦AACAAA¦TCF:1155¦AACAAA¦TCF:1339¦TTTGAT¦TCF:1376¦ATCAAA¦TCF:1587¦TTCAAA¦TCF:1902¦AACAAA¦TCF:2286¦AACAAA¦TCF:2358¦AACAAAG¦SOX:2358¦AACAAA¦TCF:2365¦ATCAAA¦TCF:2495¦TACAAAG¦SOX:2495¦TACAAA¦TCF:2769¦AACAAA¦TCF:2797¦ATCAAA¦TCF:2920¦TTTGAA¦TCF:3091¦TTCAAA¦TCF:3165¦TTCAAA¦TCF:3173¦ATCAATG¦SOX:3209¦AACAAA¦TCF:3261¦ATCAAA¦TCF:3318¦TACAAA¦TCF:3761¦ATCAAA¦TCF:4051¦CTTTGAA¦SOX:4052¦TTTGAA¦TCF:4291¦ATCAATG¦SOX:4445¦TACAAA
AB020970 solute carrier family 39 (zinc transporter), hg17 chr4 103550996 103557493 L1PA7 LINE L1 655¦AACAAAG¦SOX:655¦AACAAA¦TCF:673¦TTCAAA¦TCF:1217¦AACAAA¦TCF:1246¦AACAAA¦TCF:1415¦AACAAA¦TCF:1479¦AACAAA¦TCF:1744¦AACAATG¦SOX:1810¦TTTGAT¦TCF:1917¦TTCAAA¦TCF:2212¦AACAAA¦TCF:2232¦ATCAAA¦TCF:2333¦AACAAAG¦SOX:2333¦AACAAA¦TCF:2421¦ATCAAA¦TCF:2624¦AACAAA¦TCF:2630¦AACAAA¦TCF:2636¦AACAAA¦TCF:2642¦AACAAA¦TCF:2647¦AACAAA¦TCF:2700¦AACAAAG¦SOX:2700¦AACAAA¦TCF:2707¦ATCAAA¦TCF:2748¦ATCAATG¦SOX:2909¦ATCAATG¦SOX:3114¦AACAAA¦TCF:3142¦ATCAAA¦TCF:3202¦AACAAA¦TCF:3264¦CTTTGAA¦SOX:3265¦TTTGAA¦TCF:3280¦AACAAAG¦SOX:3280¦AACA
AK124520 LOC148823 hg17 chr1 243996865 244003309 L1PA7 LINE L1 46¦ATCAATG¦SOX:665¦AACAAAG¦SOX:665¦AACAAA¦TCF:683¦TTTGAA¦TCF:1298¦ATCAAAG¦SOX:1298¦ATCAAA¦TCF:1421¦AACAAA¦TCF:1485¦AACAAA¦TCF:1767¦AACAAAG¦SOX:1767¦AACAAA¦TCF:1816¦TTTGAT¦TCF:1923¦TTCAAA¦TCF:2062¦AACAAAG¦SOX:2062¦AACAAA¦TCF:2418¦ATCAAA¦TCF:2668¦AACAAAG¦SOX:2668¦AACAAA¦TCF:2675¦ATCAAA¦TCF:2712¦ATCAATG¦SOX:2801¦TACAAAG¦SOX:2801¦TACAAA¦TCF:3096¦AACAAA¦TCF:3124¦ATCAAA¦TCF:3245¦CTTTGAA¦SOX:3246¦TTTGAA¦TCF:3261¦AACAAAG¦SOX:3261¦AACAAA¦TCF:3411¦AACAAA¦TCF:3417¦TTCAAA¦TCF:3486¦TTCAAA¦TCF:3494¦ATCAATG¦SOX:3517¦TTT
M30471 class III alcohol dehydrogenase 5 chi subunit hg17 chr4 100372276 100378331 L1PA5 LINE L1 406¦ATCAAA¦TCF:473¦AACAAAG¦SOX:473¦AACAAA¦TCF:797¦ATCAAA¦TCF:941¦AACAAA¦TCF:1113¦AACAAAG¦SOX:1113¦AACAAA¦TCF:1168¦ATCAAA¦TCF:1196¦TTTGAA¦TCF:1324¦ATCAAA¦TCF:1384¦AACAAAG¦SOX:1384¦AACAAA¦TCF:1540¦TTCAAA¦TCF:1567¦TACAAAG¦SOX:1567¦TACAAA¦TCF:2041¦ATCAAA¦TCF:2227¦AACAAA¦TCF:2282¦AACAAAG¦SOX:2282¦AACAAA¦TCF:2289¦ATCAAA¦TCF:2419¦TACAAAG¦SOX:2419¦TACAAA¦TCF:2489¦ATCAATG¦SOX:2693¦AACAAA¦TCF:2721¦ATCAAA¦TCF:2843¦CTTTGAA¦SOX:2844¦TTTGAA¦TCF:2859¦AACAAAG¦SOX:2859¦AACAAA¦TCF:2895¦TTCAAAG¦SOX:2895¦TTCAAA¦TCF:3077¦AACA
AB002362 immunoglobulin superfamily, member 1 isoform 1 hg17 chrX 130438189 130444244 L1PA2 LINE L1 402¦ATCAAA¦TCF:569¦AACAAA¦TCF:620¦CTTTGAA¦SOX:621¦TTTGAA¦TCF:822¦AACAAA¦TCF:872¦ATCAAAG¦SOX:872¦ATCAAA¦TCF:995¦AACAAAG¦SOX:995¦AACAAA¦TCF:1050¦ATCAAA¦TCF:1079¦TTCAAA¦TCF:1107¦CTTTGAA¦SOX:1108¦TTTGAA¦TCF:2027¦ATCAAA¦TCF:2221¦AACAAA¦TCF:2276¦AACAAAG¦SOX:2276¦AACAAA¦TCF:2283¦ATCAAA¦TCF:2413¦TACAAAG¦SOX:2413¦TACAAA¦TCF:2483¦ATCAATG¦SOX:2687¦AACAAA¦TCF:2713¦ATCAAA¦TCF:2835¦CTTTGAA¦SOX:2836¦TTTGAA¦TCF:2887¦TTCAAAG¦SOX:2887¦TTCAAA¦TCF:3009¦TTCAAA¦TCF:3083¦TTCAAA¦TCF:3115¦TTTGAA¦TCF:3127¦AACAAA¦TCF:3179¦ATCAAA¦TC
AK124126 - hg17 chr9 70024343 70030390 L1PA8 LINE L1 883¦TTCAAA¦TCF:890¦ATCAAAG¦SOX:890¦ATCAAA¦TCF:1346¦ATCAAAG¦SOX:1346¦ATCAAA¦TCF:1502¦TTCAAA¦TCF:2007¦ATCAAA¦TCF:2029¦ATCAAA¦TCF:2051¦ATCAAA¦TCF:2292¦AACAAAG¦SOX:2292¦AACAAA¦TCF:2299¦ATCAAA¦TCF:2340¦ATCAATG¦SOX:2429¦TACAAAG¦SOX:2429¦TACAAA¦TCF:2495¦ATCAATG¦SOX:2699¦AACAAA¦TCF:2727¦ATCAAA¦TCF:2820¦AACAAA¦TCF:2850¦TTTGAA¦TCF:2865¦AACAAAG¦SOX:2865¦AACAAA¦TCF:3016¦AACAAA¦TCF:3022¦TTCAAA¦TCF:3093¦TTCAAA¦TCF:3185¦ATCAAA¦TCF:3242¦TACAAA¦TCF:3472¦TACAAAG¦SOX:3472¦TACAAA¦TCF:3594¦AACAAA¦TCF:3634¦ATCAATG¦SOX:3685¦ATC
BC018629 - hg17 chr12 69798119 69804150 L1PA2 LINE L1 405¦ATCAAA¦TCF:472¦AACAAAG¦SOX:472¦AACAAA¦TCF:572¦AACAAA¦TCF:623¦CTTTGAA¦SOX:624¦TTTGAA¦TCF:825¦AACAAA¦TCF:875¦ATCAAAG¦SOX:875¦ATCAAA¦TCF:998¦AACAAAG¦SOX:998¦AACAAA¦TCF:1053¦ATCAAA¦TCF:1082¦TTCAAA¦TCF:1110¦CTTTGAA¦SOX:1111¦TTTGAA¦TCF:1996¦ATCAAA¦TCF:2188¦AACAAA¦TCF:2243¦AACAAAG¦SOX:2243¦AACAAA¦TCF:2250¦ATCAAA¦TCF:2380¦TACAAAG¦SOX:2380¦TACAAA¦TCF:2654¦AACAAA¦TCF:2682¦ATCAAA¦TCF:2804¦CTTTGAA¦SOX:2805¦TTTGAA¦TCF:2820¦AACAAAG¦SOX:2820¦AACAAA¦TCF:2856¦TTCAAAG¦SOX:2856¦TTCAAA¦TCF:2978¦TTCAAA¦TCF:3052¦TTCAAA¦TCF
BX538100 neuregulin 4 hg17 chr15 74092749 74099194 L1PA7 LINE L1 675¦AACAAAG¦SOX:675¦AACAAA¦TCF:1239¦AACAAA¦TCF:1268¦AACAAA¦TCF:1313¦ATCAAAG¦SOX:1313¦ATCAAA¦TCF:1435¦AACAAA¦TCF:1499¦AACAAA¦TCF:1776¦AACAAA¦TCF:1828¦TTTGAT¦TCF:2071¦AACAAAG¦SOX:2071¦AACAAA¦TCF:2343¦AACAAA¦TCF:2426¦ATCAAA¦TCF:2454¦TTCAATG¦SOX:2689¦AACAAAG¦SOX:2689¦AACAAA¦TCF:2696¦ATCAAA¦TCF:2705¦AACAAAG¦SOX:2705¦AACAAA¦TCF:2737¦ATCAATG¦SOX:2826¦TACAAAG¦SOX:2826¦TACAAA¦TCF:3116¦ATCAAA¦TCF:3238¦CTTTGAA¦SOX:3239¦TTTGAA¦TCF:3254¦AACAAAG¦SOX:3254¦AACAAA¦TCF:3262¦AACAATG¦SOX:3406¦AACAAA¦TCF:3412¦TTCAAA¦TCF:3485¦
AK126025 - hg17 chr10 27747206 27753325 L1PA4 LINE L1 397¦ATCAAA¦TCF:464¦AACAAAG¦SOX:464¦AACAAA¦TCF:564¦AACAAA¦TCF:614¦CTTTGAA¦SOX:615¦TTTGAA¦TCF:937¦AACAAA¦TCF:987¦ATCAAAG¦SOX:987¦ATCAAA¦TCF:1110¦AACAAAG¦SOX:1110¦AACAAA¦TCF:1385¦ATCAAA¦TCF:1440¦AACAAAG¦SOX:1440¦AACAAA¦TCF:2101¦ATCAAA¦TCF:2295¦AACAAA¦TCF:2357¦ATCAAA¦TCF:2487¦TACAAAG¦SOX:2487¦TACAAA¦TCF:2761¦AACAAA¦TCF:2787¦ATCAAA¦TCF:2909¦CTTTGAA¦SOX:2910¦TTTGAA¦TCF:2925¦AACAAAG¦SOX:2925¦AACAAA¦TCF:3157¦TTCAAA¦TCF:3165¦ATCAATG¦SOX:3201¦AACAAA¦TCF:3250¦ATCAAA¦TCF:3307¦TACAAA¦TCF:3452¦CTTTGAA¦SOX:3453¦TTTGAA¦T
BT007256 - hg17 chrX 151674409 151680550 L1PA6 LINE L1 449¦AACAAAG¦SOX:449¦AACAAA¦TCF:548¦AACAAA¦TCF:902¦AACAAA¦TCF:976¦ATCAAAG¦SOX:976¦ATCAAA¦TCF:1099¦AACAAAG¦SOX:1099¦AACAAA¦TCF:1385¦ATCAAA¦TCF:1446¦AACAAAG¦SOX:1446¦AACAAA¦TCF:1602¦TTCAAA¦TCF:1917¦AACAAA¦TCF:2107¦ATCAAA¦TCF:2332¦CTTTGAT¦SOX:2333¦TTTGAT¦TCF:2356¦AACAAAG¦SOX:2356¦AACAAA¦TCF:2363¦ATCAAA¦TCF:2493¦TACAAAG¦SOX:2493¦TACAAA¦TCF:2767¦AACAAA¦TCF:2794¦ATCAAA¦TCF:2916¦CTTTGAA¦SOX:2917¦TTTGAA¦TCF:2932¦AACAAAG¦SOX:2932¦AACAAA¦TCF:3164¦TTCAAA¦TCF:3198¦TTTGAA¦TCF:3262¦ATCAAA¦TCF:3319¦TACAAA¦TCF:3549¦TACAAA
BX537918 - hg17 chr9 110258937 110264961 L1HS LINE L1 405¦ATCAAA¦TCF:472¦AACAAAG¦SOX:472¦AACAAA¦TCF:572¦AACAAA¦TCF:623¦CTTTGAA¦SOX:624¦TTTGAA¦TCF:875¦ATCAAAG¦SOX:875¦ATCAAA¦TCF:998¦AACAAAG¦SOX:998¦AACAAA¦TCF:1053¦ATCAAA¦TCF:1082¦TTCAAA¦TCF:1110¦CTTTGAA¦SOX:1111¦TTTGAA¦TCF:1994¦ATCAAA¦TCF:2188¦AACAAA¦TCF:2243¦AACAAAG¦SOX:2243¦AACAAA¦TCF:2250¦ATCAAA¦TCF:2380¦TACAAAG¦SOX:2380¦TACAAA¦TCF:2654¦AACAAA¦TCF:2682¦ATCAAA¦TCF:2804¦CTTTGAA¦SOX:2805¦TTTGAA¦TCF:2820¦AACAAAG¦SOX:2820¦AACAAA¦TCF:2856¦TTCAAAG¦SOX:2856¦TTCAAA¦TCF:2978¦TTCAAA¦TCF:3052¦TTCAAA¦TCF:3060¦ATCAATG¦S
AK058149 WD repeat- and FYVE domain-containing protein 2 hg17 chr13 51162333 51168466 L1PA3 LINE L1 404¦ATCAAA¦TCF:471¦AACAAAG¦SOX:471¦AACAAA¦TCF:564¦AACAAA¦TCF:615¦CTTTGAA¦SOX:616¦TTTGAA¦TCF:945¦AACAAA¦TCF:995¦ATCAAAG¦SOX:995¦ATCAAA¦TCF:1118¦AACAAAG¦SOX:1118¦AACAAA¦TCF:1173¦ATCAAA¦TCF:1230¦CTTTGAA¦SOX:1231¦TTTGAA¦TCF:1394¦ATCAAA¦TCF:1440¦AACAAA¦TCF:1454¦AACAAAG¦SOX:1454¦AACAAA¦TCF:2113¦ATCAAA¦TCF:2307¦AACAAA¦TCF:2362¦AACAAAG¦SOX:2362¦AACAAA¦TCF:2369¦ATCAAA¦TCF:2773¦AACAAA¦TCF:2801¦ATCAAA¦TCF:2923¦CTTTGAA¦SOX:2924¦TTTGAA¦TCF:2939¦AACAAAG¦SOX:2939¦AACAAA¦TCF:2975¦TTCAAAG¦SOX:2975¦TTCAAA¦TCF:3097¦TTCAAA¦T
AY499150 - hg17 chr9 1739540 1745665 L1PA3 LINE L1 400¦ATCAAA¦TCF:467¦AACAAAG¦SOX:467¦AACAAA¦TCF:567¦AACAAA¦TCF:618¦CTTTGAA¦SOX:619¦TTTGAA¦TCF:948¦AACAAA¦TCF:999¦ATCAAAG¦SOX:999¦ATCAAA¦TCF:1122¦AACAAAG¦SOX:1122¦AACAAA¦TCF:1177¦ATCAAA¦TCF:1458¦AACAAAG¦SOX:1458¦AACAAA¦TCF:2119¦ATCAAA¦TCF:2313¦AACAAA¦TCF:2369¦AACAAAG¦SOX:2369¦AACAAA¦TCF:2376¦ATCAAAG¦SOX:2376¦ATCAAA¦TCF:2502¦TACAAAG¦SOX:2502¦TACAAA¦TCF:2805¦ATCAAA¦TCF:2927¦CTTTGAA¦SOX:2928¦TTTGAA¦TCF:2943¦AACAAAG¦SOX:2943¦AACAAA¦TCF:2979¦TTCAAAG¦SOX:2979¦TTCAAA¦TCF:3101¦TTCAAA¦TCF:3175¦TTCAAA¦TCF:3207¦TTTGAA¦
AY074797 polycystic kidney and hepatic disease 1 isoform hg17 chr6 52063700 52069860 L1PA3 LINE L1 405¦ATCAAA¦TCF:472¦AACAAAG¦SOX:472¦AACAAA¦TCF:572¦AACAAA¦TCF:624¦TTTGAA¦TCF:953¦AACAAA¦TCF:1003¦ATCAAAG¦SOX:1003¦ATCAAA¦TCF:1126¦AACAAAG¦SOX:1126¦AACAAA¦TCF:1148¦CTTTGAT¦SOX:1149¦TTTGAT¦TCF:1181¦ATCAAA¦TCF:1210¦TTCAAA¦TCF:1238¦CTTTGAA¦SOX:1239¦TTTGAA¦TCF:1457¦AACAAA¦TCF:2122¦ATCAAA¦TCF:2316¦AACAAA¦TCF:2371¦AACAAAG¦SOX:2371¦AACAAA¦TCF:2378¦ATCAAA¦TCF:2508¦TACAAAG¦SOX:2508¦TACAAA¦TCF:2578¦ATCAATG¦SOX:2782¦AACAAA¦TCF:2810¦ATCAAA¦TCF:2828¦ATCAAA¦TCF:2933¦CTTTGAA¦SOX:2934¦TTTGAA¦TCF:2949¦AACAAAG¦SOX:2949¦AACAA
BC038843 phosphoglycerate kinase 2 hg17 chr6 49867174 49873183 L1PA3 LINE L1 405¦ATCAAA¦TCF:472¦AACAAAG¦SOX:472¦AACAAA¦TCF:573¦AACAAA¦TCF:624¦CTTTGAA¦SOX:625¦TTTGAA¦TCF:826¦AACAAA¦TCF:876¦ATCAAAG¦SOX:876¦ATCAAA¦TCF:999¦AACAAAG¦SOX:999¦AACAAA¦TCF:1054¦ATCAAA¦TCF:1083¦TTCAAA¦TCF:1111¦CTTTGAA¦SOX:1112¦TTTGAA¦TCF:1902¦TACAAA¦TCF:1996¦ATCAAA¦TCF:2190¦AACAAA¦TCF:2245¦AACAAAG¦SOX:2245¦AACAAA¦TCF:2252¦ATCAAA¦TCF:2656¦AACAAA¦TCF:2684¦ATCAAA¦TCF:2806¦CTTTGAA¦SOX:2807¦TTTGAA¦TCF:2822¦AACAAAG¦SOX:2822¦AACAAA¦TCF:2858¦TTCAAAG¦SOX:2858¦TTCAAA¦TCF:2980¦TTCAAA¦TCF:3054¦TTCAAA¦TCF:3086¦TTTGAA¦TCF:
NM_019599 taste receptor T2R1 hg17 chr5 9686432 9692758 L1PB2 LINE L1 136¦CTTTGAA¦SOX:137¦TTTGAA¦TCF:222¦CTTTGAA¦SOX:223¦TTTGAA¦TCF:1835¦ATCAAA¦TCF:1865¦AACAAA¦TCF:1901¦TACAAA¦TCF:1978¦TTTGAA¦TCF:2030¦AACAAAG¦SOX:2030¦AACAAA¦TCF:2302¦AACAAA¦TCF:2413¦AACAAA¦TCF:2438¦TTTGTA¦TCF:2536¦TACAAA¦TCF:2570¦AACAAA¦TCF:2721¦CATTGAA¦SOX:3152¦AACAAAG¦SOX:3152¦AACAAA¦TCF:3186¦AACAAA¦TCF:3327¦ATCAAA¦TCF:3407¦TACAAA¦TCF:3455¦AACAATG¦SOX:3652¦AACAAA¦TCF:3656¦AACAAA¦TCF:3690¦AACAAA¦TCF:3723¦AACAAA¦TCF:3732¦AACAAA¦TCF:3750¦AACAAA¦TCF:3765¦CTTTGAA¦SOX:3766¦TTTGAA¦TCF:3778¦AACAAA¦TCF:3886¦TACAAA
BC035343 chemokine (C-C motif) receptor 7 precursor hg17 chr17 35977936 35984238 L1PA12 LINE L1 49¦AACAAAG¦SOX:49¦AACAAA¦TCF:66¦TTCAAA¦TCF:873¦TTTGAT¦TCF:1142¦TTTGAA¦TCF:1592¦AACAAA¦TCF:1639¦ATCAAAG¦SOX:1639¦ATCAAA¦TCF:1885¦AACAATG¦SOX:2285¦TTCAAA¦TCF:2425¦TACAAAG¦SOX:2425¦TACAAA¦TCF:2953¦TTCAAA¦TCF:3033¦AACAAAG¦SOX:3033¦AACAAA¦TCF:3198¦TACAAAG¦SOX:3198¦TACAAA¦TCF:3218¦AACAAA¦TCF:3246¦ATCAAA¦TCF:3368¦CTTTGAA¦SOX:3369¦TTTGAA¦TCF:3384¦AACAAAG¦SOX:3384¦AACAAA¦TCF:3465¦ATCAAA¦TCF:3587¦ATCAAAG¦SOX:3587¦ATCAAA¦TCF:3620¦TTCAAA¦TCF:3628¦ATCAATG¦SOX:3650¦TTCAAA¦TCF:3770¦TACAAA¦TCF:4113¦AACAAA¦TCF:4170¦AACAAA
BC021298 zinc finger protein 337 hg17 chr20 25629361 25635788 L1PA7 LINE L1 658¦AACAAAG¦SOX:658¦AACAAA¦TCF:1218¦AACAAA¦TCF:1247¦AACAAA¦TCF:1416¦AACAAA¦TCF:1480¦AACAAA¦TCF:1801¦AACAAA¦TCF:1813¦TTTGAT¦TCF:2433¦ATCAAA¦TCF:2680¦AACAAAG¦SOX:2680¦AACAAA¦TCF:2687¦ATCAAA¦TCF:2724¦ATCAATG¦SOX:2814¦TACAAAG¦SOX:2814¦TACAAA¦TCF:3088¦AACAAA¦TCF:3116¦ATCAAA¦TCF:3238¦CTTTGAA¦SOX:3239¦TTTGAA¦TCF:3254¦AACAAAG¦SOX:3254¦AACAAA¦TCF:3406¦AACAAA¦TCF:3412¦TTCAAA¦TCF:3496¦ATCAATG¦SOX:3520¦TTTGAA¦TCF:3580¦ATCAAA¦TCF:3637¦TACAAA¦TCF:3811¦TACAAA¦TCF:3867¦TACAAAG¦SOX:3867¦TACAAA¦TCF:3989¦AACAAA¦TCF:4233¦AAC
AY358658 GAAI470 hg17 chr9 34516548 34522699 L1PA5 LINE L1 394¦ATCAAA¦TCF:461¦AACAAAG¦SOX:461¦AACAAA¦TCF:566¦AACAAA¦TCF:616¦CTTTGAA¦SOX:617¦TTTGAA¦TCF:956¦AACAAA¦TCF:978¦ATCAAA¦TCF:1006¦ATCAAAG¦SOX:1006¦ATCAAA¦TCF:1121¦AACAATG¦SOX:1129¦AACAAAG¦SOX:1129¦AACAAA¦TCF:1151¦CTTTGAT¦SOX:1152¦TTTGAT¦TCF:1184¦ATCAAA¦TCF:1368¦TTTGAT¦TCF:1405¦ATCAAA¦TCF:1465¦AACAAAG¦SOX:1465¦AACAAA¦TCF:1621¦TTCAAA¦TCF:2060¦ATCAATG¦SOX:2126¦ATCAAA¦TCF:2225¦ATCAATG¦SOX:2375¦AACAAAG¦SOX:2375¦AACAAA¦TCF:2507¦TACAAAG¦SOX:2507¦TACAAA¦TCF:2783¦AACAAA¦TCF:2934¦TTTGAA¦TCF:2940¦ATCAATG¦SOX:2949¦AACAA
BC064616 zinc finger, RAN-binding domain containing 3 hg17 chr2 135823112 135829250 L1PA4 LINE L1 402¦ATCAAA¦TCF:469¦AACAAAG¦SOX:469¦AACAAA¦TCF:572¦AACAAA¦TCF:622¦CTTTGAA¦SOX:623¦TTTGAA¦TCF:945¦AACAAA¦TCF:995¦ATCAAAG¦SOX:995¦ATCAAA¦TCF:1117¦AACAAAG¦SOX:1117¦AACAAA¦TCF:1172¦ATCAAA¦TCF:1356¦TTTGAT¦TCF:1393¦ATCAAA¦TCF:1453¦AACAAAG¦SOX:1453¦AACAAA¦TCF:1490¦ATCAAA¦TCF:1609¦TTCAAA¦TCF:2114¦ATCAAA¦TCF:2308¦AACAAA¦TCF:2363¦AACAAAG¦SOX:2363¦AACAAA¦TCF:2370¦ATCAAA¦TCF:2500¦TACAAAG¦SOX:2500¦TACAAA¦TCF:2680¦CATTGTT¦SOX:2769¦AACAAA¦TCF:2797¦ATCAAA¦TCF:2925¦ATCAATG¦SOX:2970¦TTCAAAG¦SOX:2970¦TTCAAA¦TCF:3092¦TTCAAA¦T
BX649191 hypothetical protein FLJ12118 hg17 chr13 110119945 110126065 L1PA5 LINE L1 449¦AACAAAG¦SOX:449¦AACAAA¦TCF:549¦AACAAA¦TCF:599¦CTTTGAA¦SOX:600¦TTTGAA¦TCF:918¦AACAAA¦TCF:968¦ATCAAAG¦SOX:968¦ATCAAA¦TCF:1092¦AACAAAG¦SOX:1092¦AACAAA¦TCF:1114¦CTTTGAT¦SOX:1115¦TTTGAT¦TCF:1156¦AACAAA¦TCF:1185¦TTTGAA¦TCF:1215¦TTCAAA¦TCF:1340¦TTTGAT¦TCF:1377¦ATCAAA¦TCF:1437¦AACAAAG¦SOX:1437¦AACAAA¦TCF:2098¦ATCAAA¦TCF:2281¦AACAAA¦TCF:2292¦AACAAA¦TCF:2347¦AACAAAG¦SOX:2347¦AACAAA¦TCF:2354¦ATCAAA¦TCF:2484¦TACAAAG¦SOX:2484¦TACAAA¦TCF:2554¦ATCAATG¦SOX:2758¦AACAAA¦TCF:2786¦ATCAAA¦TCF:2908¦CTTTGAA¦SOX:2909¦TTTGAA¦
BX248273 - hg17 chr14 40487871 40493889 L1PA3 LINE L1 403¦ATCAAA¦TCF:470¦AACAAAG¦SOX:470¦AACAAA¦TCF:570¦AACAAA¦TCF:621¦CTTTGAA¦SOX:622¦TTTGAA¦TCF:823¦AACAAA¦TCF:873¦ATCAAAG¦SOX:873¦ATCAAA¦TCF:996¦AACAAAG¦SOX:996¦AACAAA¦TCF:1051¦ATCAAA¦TCF:1080¦TTCAAA¦TCF:1108¦CTTTGAA¦SOX:1109¦TTTGAA¦TCF:1991¦ATCAAA¦TCF:2185¦AACAAA¦TCF:2240¦AACAAAG¦SOX:2240¦AACAAA¦TCF:2247¦ATCAAA¦TCF:2377¦TACAAAG¦SOX:2377¦TACAAA¦TCF:2651¦AACAAA¦TCF:2679¦ATCAAA¦TCF:2801¦CTTTGAA¦SOX:2802¦TTTGAA¦TCF:2817¦AACAAAG¦SOX:2817¦AACAAA¦TCF:2853¦TTCAAAG¦SOX:2853¦TTCAAA¦TCF:2975¦TTCAAA¦TCF:3049¦TTCAAA¦TCF
BC027471 - hg17 chr9 86886351 86892369 L1PA3 LINE L1 398¦ATCAAA¦TCF:465¦AACAAAG¦SOX:465¦AACAAA¦TCF:565¦AACAAA¦TCF:616¦CTTTGAA¦SOX:617¦TTTGAA¦TCF:818¦AACAAA¦TCF:868¦ATCAAAG¦SOX:868¦ATCAAA¦TCF:991¦AACAAAG¦SOX:991¦AACAAA¦TCF:1046¦ATCAAA¦TCF:1075¦TTCAAA¦TCF:1103¦CTTTGAA¦SOX:1104¦TTTGAA¦TCF:1988¦ATCAAA¦TCF:2182¦AACAAA¦TCF:2237¦AACAAAG¦SOX:2237¦AACAAA¦TCF:2244¦ATCAAA¦TCF:2374¦TACAAAG¦SOX:2374¦TACAAA¦TCF:2648¦AACAAA¦TCF:2676¦ATCAAA¦TCF:2798¦CTTTGAA¦SOX:2799¦TTTGAA¦TCF:2814¦AACAAAG¦SOX:2814¦AACAAA¦TCF:2850¦TTCAAAG¦SOX:2850¦TTCAAA¦TCF:2972¦TTCAAA¦TCF:3034¦TACAAA¦TCF
AK057244 - hg17 chr13 45088517 45094967 L1PA7 LINE L1 659¦AACAAAG¦SOX:659¦AACAAA¦TCF:1221¦AACAAA¦TCF:1250¦AACAAA¦TCF:1430¦AACAAA¦TCF:1494¦AACAAA¦TCF:1770¦AACAAA¦TCF:1774¦AACAAAG¦SOX:1774¦AACAAA¦TCF:1823¦TTTGAT¦TCF:1930¦TTCAAA¦TCF:2059¦TACAAAG¦SOX:2059¦TACAAA¦TCF:2308¦AACAAA¦TCF:2380¦ATCAAA¦TCF:2557¦TTCAAAG¦SOX:2557¦TTCAAA¦TCF:2686¦AACAAAG¦SOX:2686¦AACAAA¦TCF:2693¦ATCAAA¦TCF:2738¦ATCAATG¦SOX:2827¦TACAAAG¦SOX:2827¦TACAAA¦TCF:3097¦AACAAA¦TCF:3125¦ATCAAA¦TCF:3247¦CTTTGAA¦SOX:3248¦TTTGAA¦TCF:3263¦AACAAAG¦SOX:3263¦AACAAA¦TCF:3383¦ATCAAA¦TCF:3416¦AACAAA¦TCF:3422¦TA
U55766 - hg17 chr12 74197477 74203629 L1PA4 LINE L1 406¦ATCAAA¦TCF:473¦AACAAAG¦SOX:473¦AACAAA¦TCF:573¦AACAAA¦TCF:623¦CTTTGAA¦SOX:624¦TTTGAA¦TCF:946¦AACAAA¦TCF:996¦ATCAAAG¦SOX:996¦ATCAAA¦TCF:1118¦AACAAAG¦SOX:1118¦AACAAA¦TCF:1202¦TTTGAA¦TCF:1394¦ATCAAA¦TCF:1454¦AACAAAG¦SOX:1454¦AACAAA¦TCF:2115¦ATCAAA¦TCF:2309¦AACAAA¦TCF:2364¦AACAAAG¦SOX:2364¦AACAAA¦TCF:2501¦TACAAAG¦SOX:2501¦TACAAA¦TCF:2774¦AACAAA¦TCF:2802¦ATCAAA¦TCF:2924¦CTTTGAA¦SOX:2925¦TTTGAA¦TCF:3098¦TTCAAA¦TCF:3173¦TTCAAA¦TCF:3181¦ATCAATG¦SOX:3205¦TTTGAA¦TCF:3217¦AACAAA¦TCF:3269¦ATCAAA¦TCF:3678¦AACAAA¦TC
Nature Neuroscience: doi:10.1038/nn.2360
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Nature Neuroscience: doi:10.1038/nn.2360
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Nature Neuroscience: doi:10.1038/nn.2360
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383¦CATTGTT¦SOX:406¦ATCAAA¦TCF:473¦AACAAAG¦SOX:473¦AACAAA¦TCF:623¦CTTTGAA¦SOX:624¦TTTGAA¦TCF:942¦AACAAA¦TCF:992¦ATCAAAG¦SOX:992¦ATCAAA¦TCF:1115¦AACAAAG¦SOX:1115¦AACAAA¦TCF:1170¦ATCAAA¦TCF:1264¦ATCAATG¦SOX:1391¦ATCAAA¦TCF:1451¦AACAAAG¦SOX:1451¦AACAAA¦TCF:1607¦TTCAAA¦TCF:2112¦ATCAAA¦TCF:2306¦AACAAA¦TCF:2361¦AACAAAG¦SOX:2361¦AACAAA¦TCF:2368¦ATCAAA¦TCF:2498¦TACAAAG¦SOX:2498¦TACAAA¦TCF:2772¦AACAAA¦TCF:2800¦ATCAAA¦TCF:2893¦AACAAA¦TCF:2922¦CTTTGAA¦SOX:2923¦TTTGAA¦TCF:2938¦AACAAAG¦SOX:2938¦AACAAA¦TCF:2974¦TTCAAAG¦SOX:2974¦TTCAAA¦TCF:3096¦TTCAAA¦TCF:3170¦TTCAAA¦TCF:3178¦ATCAATG¦SOX:3202¦TTTGAA¦TCF:3214¦AACAAA¦TCF:3266¦ATCAAA¦TCF:3323¦TACAAA¦TCF:3674¦AACAAA¦TCF:3713¦CATTGAT¦SOX:3765¦ATCAAA¦TCF:3836¦ATCAAA¦TCF:3914¦CTTTGAA¦SOX:3915¦TTTGAA¦TCF:4057¦CTTTGAA¦SOX:4058¦TTTGAA¦TCF:4293¦TACAAA¦TCF:4299¦ATCAATG¦SOX:4388¦TTCAAAG¦SOX:4388¦TTCAAA¦TCF:4455¦AACAAA¦TCF:4487¦TACAAA¦TCF:4491¦AACAAA¦TCF:4575¦TTCAATG¦SOX:4695¦AACAAAG¦SOX:4695¦AACAAA¦TCF:4725¦TTCAAA¦TCF:4970¦TACAAA¦TCF:5111¦AACAAA¦TCF:5262¦TACAATG¦SOX:5275¦AACAAA¦TCF:5294¦AACAAA¦TCF:5307¦ATCAAA¦TCF:5418¦ATCAAA¦TCF:5744¦AACAATG¦SOX:5828¦CTTTGTA¦SOX:5829¦TTTGTA¦TCF:5930¦AACAATG¦SOX:6088¦AACAAA¦TCF:
406¦ATCAAA¦TCF:496¦AACAAAG¦SOX:496¦AACAAA¦TCF:647¦CTTTGAA¦SOX:648¦TTTGAA¦TCF:849¦AACAAA¦TCF:899¦ATCAAAG¦SOX:899¦ATCAAA¦TCF:1022¦AACAAAG¦SOX:1022¦AACAAA¦TCF:1044¦CTTTGAT¦SOX:1045¦TTTGAT¦TCF:1077¦ATCAAA¦TCF:1106¦TTCAAA¦TCF:1134¦CTTTGAA¦SOX:1135¦TTTGAA¦TCF:1601¦TTCAAA¦TCF:2019¦ATCAAA¦TCF:2213¦AACAAA¦TCF:2268¦AACAAAG¦SOX:2268¦AACAAA¦TCF:2275¦ATCAAA¦TCF:2405¦TACAAAG¦SOX:2405¦TACAAA¦TCF:2679¦AACAAA¦TCF:2707¦ATCAAA¦TCF:2829¦CTTTGAA¦SOX:2830¦TTTGAA¦TCF:2845¦AACAAAG¦SOX:2845¦AACAAA¦TCF:2881¦TTCAAAG¦SOX:2881¦TTCAAA¦TCF:3003¦TTCAAA¦TCF:3077¦TTCAAA¦TCF:3109¦TTTGAA¦TCF:3121¦AACAAA¦TCF:3173¦ATCAAA¦TCF:3230¦TACAAA¦TCF:3253¦TACAAA¦TCF:3582¦AACAAA¦TCF:3621¦CATTGAT¦SOX:3656¦AACAAA¦TCF:3889¦TTCAAA¦TCF:3965¦CTTTGAA¦SOX:3966¦TTTGAA¦TCF:4201¦TACAAA¦TCF:4207¦ATCAATG¦SOX:4214¦TACAAA¦TCF:4296¦TTCAAAG¦SOX:4296¦TTCAAA¦TCF:4329¦TACAAAG¦SOX:4329¦TACAAA¦TCF:4363¦TACAAA¦TCF:4384¦ATCAAAG¦SOX:4384¦ATCAAA¦TCF:4395¦TACAAA¦TCF:4399¦AACAAA¦TCF:4483¦TTCAATG¦SOX:4603¦AACAAAG¦SOX:4603¦AACAAA¦TCF:4633¦TTCAAA¦TCF:4700¦ATCAATG¦SOX:4878¦TACAAA¦TCF:5019¦AACAAA¦TCF:5109¦TACAAA¦TCF:5170¦TACAATG¦SOX:5183¦AACAAA¦TCF:5202¦AACAAA¦TCF:5215¦ATCAAA¦TCF:5326¦ATCAAA¦TCF:5647¦AACAATG¦SOX:5731¦CTTTGTA¦SOX:5732¦TTTGTA¦TCF:5787¦ATCAAA¦TCF:5834¦AACAATG¦SOX:
76¦TTTGAT¦TCF:112¦ATCAAAG¦SOX:112¦ATCAAA¦TCF:1001¦AACAATG¦SOX:1268¦ATCAATG¦SOX:1923¦CATTGAT¦SOX:1947¦TACAAAG¦SOX:1947¦TACAAA¦TCF:2083¦CATTGAT¦SOX:2095¦AACAAA¦TCF:2135¦AACAAAG¦SOX:2135¦AACAAA¦TCF:2348¦AACAAAG¦SOX:2348¦AACAAA¦TCF:2497¦TTTGAA¦TCF:2545¦AACAAAG¦SOX:2545¦AACAAA¦TCF:2586¦ATCAAA¦TCF:2637¦AACAAA¦TCF:3097¦TACAAA¦TCF:3259¦CATTGTT¦SOX:3341¦TTTGTA¦TCF:3424¦TACAAAG¦SOX:3424¦TACAAA¦TCF:3472¦ATCAAA¦TCF:3503¦ATCAAAG¦SOX:3503¦ATCAAA¦TCF:3533¦AACAAA¦TCF:3544¦TACAAA¦TCF:3556¦ATCAAA¦TCF:3563¦AACAAAG¦SOX:3563¦AACAAA¦TCF:3603¦CTTTGAA¦SOX:3604¦TTTGAA¦TCF:3635¦ATCAAA¦TCF:3776¦ATCAAA¦TCF:3861¦CATTGAA¦SOX:4044¦TACAAA¦TCF:4214¦ATCAATG¦SOX:4243¦TACAAA¦TCF:4346¦AACAAA¦TCF:4437¦AACAAA¦TCF:4484¦AACAAA¦TCF:4538¦AACAAA¦TCF:4564¦TACAAA¦TCF:4606¦AACAAA¦TCF:4615¦AACAAA¦TCF:4707¦TACAAAG¦SOX:4707¦TACAAA¦TCF:4748¦AACAAA¦TCF:4885¦ATCAAA¦TCF:4963¦TTCAAA¦TCF:4980¦CATTGTA¦SOX:5189¦TTCAAA¦TCF:5273¦TTCAAA¦TCF:5302¦AACAAA¦TCF:5512¦TTCAAA¦TCF:5941¦ATCAAA¦TCF:6088¦TACAAA¦TCF:6376¦AACAAA¦TCF:6406¦TTTGAT¦TCF:6453¦AACAAA¦TCF:6508¦AACAAAG¦SOX:6508¦AACAAA¦TCF:6796¦ATCAAA¦TCF:6844¦ATCAAA¦TCF:7292¦TTTGTA¦TCF:7300¦ATCAAA¦TCF:7409¦TACAAAG¦SOX:7409¦TACAAA¦TCF:7497¦TTCAAA¦TCF:7536¦TACAAA¦TCF:7624¦CATTGTA¦SOX:7644¦TACAAA¦TCF:
405¦ATCAAA¦TCF:472¦AACAAAG¦SOX:472¦AACAAA¦TCF:572¦AACAAA¦TCF:624¦TTTGAA¦TCF:953¦AACAAA¦TCF:1003¦ATCAAAG¦SOX:1003¦ATCAAA¦TCF:1126¦AACAAAG¦SOX:1126¦AACAAA¦TCF:1148¦CTTTGAT¦SOX:1149¦TTTGAT¦TCF:1181¦ATCAAA¦TCF:1210¦TTCAAA¦TCF:1238¦CTTTGAA¦SOX:1239¦TTTGAA¦TCF:1457¦AACAAA¦TCF:2122¦ATCAAA¦TCF:2316¦AACAAA¦TCF:2371¦AACAAAG¦SOX:2371¦AACAAA¦TCF:2378¦ATCAAA¦TCF:2508¦TACAAAG¦SOX:2508¦TACAAA¦TCF:2578¦ATCAATG¦SOX:2782¦AACAAA¦TCF:2810¦ATCAAA¦TCF:2828¦ATCAAA¦TCF:2933¦CTTTGAA¦SOX:2934¦TTTGAA¦TCF:2949¦AACAAAG¦SOX:2949¦AACAAA¦TCF:2985¦TTCAAAG¦SOX:2985¦TTCAAA¦TCF:3107¦TTCAAA¦TCF:3181¦TTCAAA¦TCF:3213¦TTTGAA¦TCF:3225¦AACAAA¦TCF:3277¦ATCAAA¦TCF:3334¦TACAAA¦TCF:3357¦TACAAA¦TCF:3725¦CATTGAT¦SOX:3777¦ATCAAA¦TCF:3879¦ATCAAAG¦SOX:3879¦ATCAAA¦TCF:4069¦CTTTGAA¦SOX:4070¦TTTGAA¦TCF:4305¦TACAAA¦TCF:4311¦ATCAATG¦SOX:4400¦TTCAAAG¦SOX:4400¦TTCAAA¦TCF:4467¦TACAAA¦TCF:4499¦TACAAAG¦SOX:4499¦TACAAA¦TCF:4587¦TTCAATG¦SOX:4664¦AACAAA¦TCF:4708¦AACAAAG¦SOX:4708¦AACAAA¦TCF:4738¦TTCAAA¦TCF:4805¦ATCAATG¦SOX:4983¦TACAAA¦TCF:5124¦AACAAA¦TCF:5214¦TACAAA¦TCF:5275¦TACAATG¦SOX:5288¦AACAAA¦TCF:5307¦AACAAA¦TCF:5320¦ATCAAA¦TCF:5431¦ATCAAA¦TCF:5704¦TTTGTT¦TCF:5757¦AACAATG¦SOX:5943¦AACAATG¦SOX:
449¦AACAAAG¦SOX:449¦AACAAA¦TCF:549¦AACAAA¦TCF:599¦CTTTGAA¦SOX:600¦TTTGAA¦TCF:918¦AACAAA¦TCF:968¦ATCAAAG¦SOX:968¦ATCAAA¦TCF:1092¦AACAAAG¦SOX:1092¦AACAAA¦TCF:1114¦CTTTGAT¦SOX:1115¦TTTGAT¦TCF:1156¦AACAAA¦TCF:1185¦TTTGAA¦TCF:1215¦TTCAAA¦TCF:1340¦TTTGAT¦TCF:1377¦ATCAAA¦TCF:1437¦AACAAAG¦SOX:1437¦AACAAA¦TCF:2098¦ATCAAA¦TCF:2281¦AACAAA¦TCF:2292¦AACAAA¦TCF:2347¦AACAAAG¦SOX:2347¦AACAAA¦TCF:2354¦ATCAAA¦TCF:2484¦TACAAAG¦SOX:2484¦TACAAA¦TCF:2554¦ATCAATG¦SOX:2758¦AACAAA¦TCF:2786¦ATCAAA¦TCF:2908¦CTTTGAA¦SOX:2909¦TTTGAA¦TCF:2924¦AACAAAG¦SOX:2924¦AACAAA¦TCF:3082¦TTCAAA¦TCF:3156¦TTCAAA¦TCF:3164¦ATCAATG¦SOX:3188¦TTTGAA¦TCF:3200¦AACAAA¦TCF:3252¦ATCAAA¦TCF:3265¦AACAAA¦TCF:3309¦TACAAA¦TCF:3657¦AACAAA¦TCF:3748¦ATCAAA¦TCF:4041¦CTTTGAA¦SOX:4042¦TTTGAA¦TCF:4277¦TACAAA¦TCF:4283¦ATCAATG¦SOX:4368¦TTCAAAG¦SOX:4368¦TTCAAA¦TCF:4435¦TACAAA¦TCF:4471¦AACAAA¦TCF:4555¦TTCAATG¦SOX:4637¦TTCAAA¦TCF:4681¦AACAAAG¦SOX:4681¦AACAAA¦TCF:4711¦TTCAAA¦TCF:4887¦AACAATG¦SOX:5088¦AACAAA¦TCF:5239¦TACAAAG¦SOX:5239¦TACAAA¦TCF:5252¦AACAAA¦TCF:5271¦ATCAAA¦TCF:5284¦ATCAAA¦TCF:5395¦ATCAAA¦TCF:5429¦TTTGAA¦TCF:5804¦CTTTGTA¦SOX:5805¦TTTGTA¦TCF:5906¦AACAATG¦SOX:6062¦AACAAA¦TCF:
Nature Neuroscience: doi:10.1038/nn.2360
Supplemental Table 2. L1 elements proximal to the transcriptional start site ofknown protein-coding genes in mouse genome.A) Gene ID (GenBank accession number).B) Gene nameC) mm5 (mouse version 5)D) chromosomeE) start coordinate of L1F) end coordinate of L1G-I) family of L1J-) TCF and SOX2 sites. a|b|c separated by colons ":"a = location in L1 of the site,b = site motifc = which TF (Sox or TCF/LEF)
Nature Neuroscience: doi:10.1038/nn.2360
AK017988 RIKEN cDNA 5830443L24 mm5 chr5 102269120 102275349 L1Md_T LINE L1 796¦ATCAAA¦TCF:838¦TACAAA¦TCF:859¦AACAAA¦TCF:1048¦ATCAAAG¦SOX:1048¦ATCAAA¦TCF:1189¦AACAAA¦TCF:1317¦ATCAAA¦TCF:1592¦TTCAAAG¦SOX:1592¦TTCAAA¦TCF:1669¦AACAAA¦TCF:1766¦ATCAATG¦SOX:1804¦AACAAA¦TCF:1988¦ATCAAA¦TCF:2021¦ATCAAAG¦SOX:2021¦ATCAAA¦TCF:2242¦AACAAA¦TCF:2285¦AACAAA¦TCF:2373¦TTCAAA¦TCF:2439¦AACAAA¦TCF:2745¦ATCAAA¦TCF:2791¦TTCAAAG¦SOX:2791¦TTCAAA¦TCF:2895¦AACAAA¦TCF:2967¦TACAAA¦TCF:2984¦AACAAA¦TCF:3174¦TTCAAAG¦SOX:3174¦TTCAAA¦TCF:3296¦AACAAAG¦SOX:3296¦AACAAA¦TCF:3462¦ATCAATG¦SOX:3483¦AACAAA¦TCF:3627¦AACA
U96401 aldehyde dehydrogenase family 1, subfamily A7 mm5 chr19 20005126 20011271 L1_Mus1 LINE L1 639¦TTTGAA¦TCF:801¦AACAAA¦TCF:990¦ATCAAAG¦SOX:990¦ATCAAA¦TCF:1131¦AACAAA¦TCF:1259¦AACAAA¦TCF:1414¦AACAAA¦TCF:1497¦ATCAAA¦TCF:1534¦TTCAAAG¦SOX:1534¦TTCAAA¦TCF:1619¦AACAAA¦TCF:1667¦AACAAA¦TCF:1716¦ATCAATG¦SOX:1938¦ATCAAA¦TCF:1959¦ATCAAAG¦SOX:1959¦ATCAAA¦TCF:1994¦TTTGAT¦TCF:2114¦ATCAATG¦SOX:2222¦AACAAA¦TCF:2310¦TACAAA¦TCF:2390¦TACAAAG¦SOX:2390¦TACAAA¦TCF:2634¦AACAAA¦TCF:2681¦ATCAAA¦TCF:2727¦TTCAAAG¦SOX:2727¦TTCAAA¦TCF:2831¦AACAAA¦TCF:2903¦TACAAA¦TCF:2920¦AACAAA¦TCF:3323¦ATCAAA¦TCF:3419¦AACAAA¦TCF:3431¦AACAAA
NM_147052 olfactory receptor 589 mm5 chr7 90670208 90676390 L1Md_A LINE L1 536¦AACAAA¦TCF:818¦AACAAA¦TCF:1018¦TACAAA¦TCF:1148¦AACAAA¦TCF:1276¦AACAAA¦TCF:1514¦AACAAA¦TCF:1551¦TTCAAAG¦SOX:1551¦TTCAAA¦TCF:1628¦AACAAA¦TCF:1676¦AACAAA¦TCF:1725¦ATCAATG¦SOX:1947¦ATCAAA¦TCF:1980¦ATCAAAG¦SOX:1980¦ATCAAA¦TCF:2135¦TTCAAAG¦SOX:2135¦TTCAAA¦TCF:2186¦AACAAA¦TCF:2243¦AACAAA¦TCF:2331¦TACAAA¦TCF:2703¦ATCAAA¦TCF:2749¦TTCAAAG¦SOX:2749¦TTCAAA¦TCF:2853¦AACAAA¦TCF:2925¦TACAAA¦TCF:2942¦AACAAA¦TCF:3132¦TTCAAAG¦SOX:3132¦TTCAAA¦TCF:3254¦AACAAAG¦SOX:3254¦AACAAA¦TCF:3294¦ATCAATG¦SOX:3420¦ATCAATG¦SOX:3441¦AA
BC058647 deltex 4 homolog mm5 chr19 11752291 11758468 L1Md_T LINE L1 748¦ATCAAA¦TCF:790¦TACAAA¦TCF:811¦AACAAA¦TCF:1000¦ATCAAAG¦SOX:1000¦ATCAAA¦TCF:1141¦AACAAA¦TCF:1269¦ATCAAA¦TCF:1544¦TTCAAAG¦SOX:1544¦TTCAAA¦TCF:1621¦AACAAA¦TCF:1718¦ATCAATG¦SOX:1756¦AACAAA¦TCF:1940¦ATCAAA¦TCF:1973¦ATCAAAG¦SOX:1973¦ATCAAA¦TCF:2193¦AACAAA¦TCF:2236¦AACAAA¦TCF:2324¦TTCAAA¦TCF:2390¦AACAAA¦TCF:2696¦ATCAAA¦TCF:2742¦TTCAAAG¦SOX:2742¦TTCAAA¦TCF:2846¦AACAAA¦TCF:2918¦TACAAA¦TCF:2935¦AACAAA¦TCF:3125¦TTCAAAG¦SOX:3125¦TTCAAA¦TCF:3247¦AACAAAG¦SOX:3247¦AACAAA¦TCF:3413¦ATCAATG¦SOX:3434¦AACAAA¦TCF:3596¦ATCA
BC003993 cDNA sequence BC003993 mm5 chr2 77846050 77853038 L1Md_A LINE L1 1620¦AACAAA¦TCF:1820¦TACAAA¦TCF:1950¦AACAAA¦TCF:2078¦AACAAA¦TCF:2353¦TTCAAAG¦SOX:2353¦TTCAAA¦TCF:2430¦AACAAA¦TCF:2478¦AACAAA¦TCF:2527¦ATCAATG¦SOX:2749¦ATCAAA¦TCF:2782¦ATCAAAG¦SOX:2782¦ATCAAA¦TCF:2937¦TTCAAAG¦SOX:2937¦TTCAAA¦TCF:3002¦AACAAA¦TCF:3045¦AACAAA¦TCF:3133¦TACAAA¦TCF:3505¦ATCAAA¦TCF:3551¦TTCAAAG¦SOX:3551¦TTCAAA¦TCF:3655¦AACAAA¦TCF:3727¦TACAAA¦TCF:3744¦AACAAA¦TCF:3934¦TTCAAAG¦SOX:3934¦TTCAAA¦TCF:4056¦AACAAAG¦SOX:4056¦AACAAA¦TCF:4222¦ATCAATG¦SOX:4243¦AACAAA¦TCF:4405¦ATCAAAG¦SOX:4405¦ATCAAA¦TCF:4526¦
BC016446 cytochrome P450, family 2, subfamily j, mm5 chr4 94409788 94416017 L1Md_F2 LINE L1 799¦TACAAA¦TCF:820¦AACAAA¦TCF:1009¦ATCAAAG¦SOX:1009¦ATCAAA¦TCF:1020¦TACAAA¦TCF:1027¦TACAAA¦TCF:1150¦AACAAA¦TCF:1278¦AACAAA¦TCF:1482¦CATTGAT¦SOX:1553¦TTCAAAG¦SOX:1553¦TTCAAA¦TCF:1635¦AACAAA¦TCF:1639¦AACAAA¦TCF:1683¦AACAAA¦TCF:1732¦ATCAATG¦SOX:1954¦ATCAAA¦TCF:1987¦ATCAAAG¦SOX:1987¦ATCAAA¦TCF:2142¦ATCAATG¦SOX:2238¦AACAAA¦TCF:2330¦TACAAA¦TCF:2702¦ATCAAA¦TCF:2748¦TTCAAAG¦SOX:2748¦TTCAAA¦TCF:2852¦AACAAA¦TCF:2924¦TACAAA¦TCF:2941¦AACAAA¦TCF:2994¦TACAAA¦TCF:3132¦TTCAAAG¦SOX:3132¦TTCAAA¦TCF:3254¦AACAAAG¦SOX:3254¦AA
AK033498 dopa/tyrosine sulfotransferase mm5 chr5 86331961 86338305 L1Md_T LINE L1 912¦ATCAAA¦TCF:954¦TACAAA¦TCF:975¦AACAAA¦TCF:1164¦ATCAAAG¦SOX:1164¦ATCAAA¦TCF:1306¦AACAAA¦TCF:1434¦ATCAAA¦TCF:1709¦TTCAAAG¦SOX:1709¦TTCAAA¦TCF:1786¦AACAAA¦TCF:1883¦ATCAATG¦SOX:1921¦AACAAA¦TCF:2105¦ATCAAA¦TCF:2138¦ATCAAAG¦SOX:2138¦ATCAAA¦TCF:2358¦AACAAA¦TCF:2401¦AACAAA¦TCF:2489¦TTCAAA¦TCF:2555¦AACAAA¦TCF:2861¦ATCAAA¦TCF:2907¦TTCAAAG¦SOX:2907¦TTCAAA¦TCF:3011¦AACAAA¦TCF:3083¦TACAAA¦TCF:3100¦AACAAA¦TCF:3290¦TTCAAAG¦SOX:3290¦TTCAAA¦TCF:3412¦AACAAAG¦SOX:3412¦AACAAA¦TCF:3578¦ATCAATG¦SOX:3599¦AACAAA¦TCF:3761¦ATCA
AF420436 - mm5 chr1 71670418 71676624 L1Md_T LINE L1 777¦ATCAAA¦TCF:819¦TACAAA¦TCF:840¦AACAAA¦TCF:1029¦ATCAAAG¦SOX:1029¦ATCAAA¦TCF:1170¦AACAAA¦TCF:1298¦ATCAAA¦TCF:1573¦TTCAAAG¦SOX:1573¦TTCAAA¦TCF:1650¦AACAAA¦TCF:1747¦ATCAATG¦SOX:1785¦AACAAA¦TCF:1969¦ATCAAA¦TCF:2002¦ATCAAAG¦SOX:2002¦ATCAAA¦TCF:2222¦AACAAA¦TCF:2265¦AACAAA¦TCF:2353¦TTCAAA¦TCF:2419¦AACAAA¦TCF:2725¦ATCAAA¦TCF:2771¦TTCAAAG¦SOX:2771¦TTCAAA¦TCF:2875¦AACAAA¦TCF:2947¦TACAAA¦TCF:2964¦AACAAA¦TCF:3154¦TTCAAAG¦SOX:3154¦TTCAAA¦TCF:3276¦AACAAAG¦SOX:3276¦AACAAA¦TCF:3442¦ATCAATG¦SOX:3463¦AACAAA¦TCF:3625¦ATCA
BC051435 - mm5 chr9 39318359 39325416 L1Md_F2 LINE L1 532¦AACAAA¦TCF:769¦AACAAA¦TCF:818¦AACAAAG¦SOX:818¦AACAAA¦TCF:958¦ATCAAAG¦SOX:958¦ATCAAA¦TCF:969¦TACAAA¦TCF:1099¦AACAAA¦TCF:1227¦AACAAA¦TCF:1444¦AACAAAG¦SOX:1444¦AACAAA¦TCF:1502¦TTCAAAG¦SOX:1502¦TTCAAA¦TCF:1627¦AACAAA¦TCF:1676¦ATCAATG¦SOX:1696¦AACAAA¦TCF:2383¦AACAAA¦TCF:2557¦AACAAA¦TCF:2766¦ATCAAAG¦SOX:2766¦ATCAAA¦TCF:2907¦AACAAA¦TCF:3035¦AACAAA¦TCF:3192¦TACAAA¦TCF:3251¦AACAAA¦TCF:3310¦TTCAAAG¦SOX:3310¦TTCAAA¦TCF:3387¦AACAAA¦TCF:3435¦AACAAA¦TCF:3484¦ATCAATG¦SOX:3771¦TACAAA¦TCF:3788¦AACAAA¦TCF:3971¦ATCAAA¦T
BC034071 myosin ID mm5 chr11 80258240 80264250 L1Md_F2 LINE L1 143¦TTCAAA¦TCF:528¦AACAATG¦SOX:639¦AACAAA¦TCF:828¦ATCAAAG¦SOX:828¦ATCAAA¦TCF:962¦AACAAA¦TCF:1028¦TACAAA¦TCF:1090¦AACAAA¦TCF:1365¦TTCAAAG¦SOX:1365¦TTCAAA¦TCF:1448¦AACAAA¦TCF:1496¦AACAAA¦TCF:1545¦ATCAATG¦SOX:1768¦ATCAAA¦TCF:1801¦ATCAAAG¦SOX:1801¦ATCAAA¦TCF:1956¦ATCAATG¦SOX:2021¦AACAAA¦TCF:2064¦AACAAA¦TCF:2272¦ATCAATG¦SOX:2477¦AACAAA¦TCF:2566¦TTCAAAG¦SOX:2566¦TTCAAA¦TCF:2670¦AACAAA¦TCF:2742¦TACAAA¦TCF:2759¦AACAAA¦TCF:2787¦AACAAA¦TCF:2965¦TTCAAAG¦SOX:2965¦TTCAAA¦TCF:3086¦AACAAAG¦SOX:3086¦AACAAA¦TCF:3126¦ATCAA
BC030416 - mm5 chr9 74257444 74263909 L1Md_T LINE L1 1037¦ATCAAA¦TCF:1079¦TTCAAA¦TCF:1100¦AACAAA¦TCF:1289¦ATCAAAG¦SOX:1289¦ATCAAA¦TCF:1430¦AACAAA¦TCF:1558¦AACAAA¦TCF:1619¦TACAAAG¦SOX:1619¦TACAAA¦TCF:1833¦TTCAAAG¦SOX:1833¦TTCAAA¦TCF:1874¦AACAATG¦SOX:1910¦AACAAA¦TCF:1958¦AACAAA¦TCF:2007¦ATCAATG¦SOX:2045¦AACAAA¦TCF:2229¦ATCAAA¦TCF:2262¦ATCAAAG¦SOX:2262¦ATCAAA¦TCF:2482¦AACAAA¦TCF:2525¦AACAAA¦TCF:2613¦TTCAAA¦TCF:2679¦AACAAA¦TCF:2985¦ATCAAA¦TCF:3031¦TTCAAAG¦SOX:3031¦TTCAAA¦TCF:3135¦AACAAA¦TCF:3207¦TACAAA¦TCF:3224¦AACAAA¦TCF:3414¦TTCAAAG¦SOX:3414¦TTCAAA¦TCF:3536¦A
NM_146525 olfactory receptor 847 mm5 chr9 19247374 19253609 L1Md_T LINE L1 866¦AACAAA¦TCF:1055¦ATCAAAG¦SOX:1055¦ATCAAA¦TCF:1066¦TACAAA¦TCF:1196¦AACAAA¦TCF:1324¦AACAAA¦TCF:1599¦TTCAAAG¦SOX:1599¦TTCAAA¦TCF:1673¦AACAAA¦TCF:1721¦AACAAA¦TCF:1770¦ATCAATG¦SOX:1992¦ATCAAA¦TCF:2025¦ATCAAAG¦SOX:2025¦ATCAAA¦TCF:2180¦ATCAATG¦SOX:2245¦AACAAA¦TCF:2288¦AACAAA¦TCF:2376¦TACAAA¦TCF:2543¦CTTTGTA¦SOX:2544¦TTTGTA¦TCF:2748¦ATCAAA¦TCF:2794¦TTCAAAG¦SOX:2794¦TTCAAA¦TCF:2898¦AACAAA¦TCF:2970¦TACAAA¦TCF:2987¦AACAAA¦TCF:3183¦TTCAAAG¦SOX:3183¦TTCAAA¦TCF:3304¦AACAAAG¦SOX:3304¦AACAAA¦TCF:3469¦ATCAATG¦SOX:3490¦
NM_146647 olfactory receptor 1154 mm5 chr2 87800445 87806885 L1Md_T LINE L1 1012¦ATCAAA¦TCF:1054¦TACAAA¦TCF:1075¦AACAAA¦TCF:1264¦ATCAAAG¦SOX:1264¦ATCAAA¦TCF:1405¦AACAAA¦TCF:1533¦ATCAAA¦TCF:1594¦TACAAAG¦SOX:1594¦TACAAA¦TCF:1808¦TTCAAAG¦SOX:1808¦TTCAAA¦TCF:1885¦AACAAA¦TCF:1982¦ATCAATG¦SOX:2020¦AACAAA¦TCF:2204¦ATCAAA¦TCF:2457¦AACAAA¦TCF:2500¦AACAAA¦TCF:2588¦TTCAAA¦TCF:2654¦AACAAA¦TCF:2960¦ATCAAA¦TCF:3006¦TTCAAAG¦SOX:3006¦TTCAAA¦TCF:3110¦AACAAA¦TCF:3182¦TACAAA¦TCF:3199¦AACAAA¦TCF:3389¦TTCAAAG¦SOX:3389¦TTCAAA¦TCF:3511¦AACAAAG¦SOX:3511¦AACAAA¦TCF:3677¦ATCAATG¦SOX:3698¦AACAAA¦TCF:3860¦A
AK040884 expressed sequence AI447904 mm5 chr1 173670477 173676539 L1Md_T LINE L1 94¦ATCAAA¦TCF:796¦AACAAA¦TCF:996¦TACAAA¦TCF:1126¦AACAAA¦TCF:1254¦AACAAA¦TCF:1529¦TTCAAAG¦SOX:1529¦TTCAAA¦TCF:1606¦AACAAA¦TCF:1654¦AACAAA¦TCF:1703¦ATCAATG¦SOX:1925¦ATCAAA¦TCF:1957¦ATCAAAG¦SOX:1957¦ATCAAA¦TCF:2064¦CATTGTA¦SOX:2112¦ATCAATG¦SOX:2221¦AACAAA¦TCF:2309¦TACAAA¦TCF:2677¦ATCAAA¦TCF:2723¦TTCAAAG¦SOX:2723¦TTCAAA¦TCF:2764¦ATCAAAG¦SOX:2764¦ATCAAA¦TCF:2799¦TTCAAA¦TCF:2822¦TACAAA¦TCF:2839¦AACAAA¦TCF:3150¦AACAAAG¦SOX:3150¦AACAAA¦TCF:3316¦ATCAATG¦SOX:3337¦AACAAA¦TCF:3499¦ATCAAAG¦SOX:3499¦ATCAAA¦TCF:3620¦AAC
AB011678 doublecortin mm5 chrX 133826870 133833072 L1Md_F2 LINE L1 851¦AACAAA¦TCF:1041¦ATCAAAG¦SOX:1041¦ATCAAA¦TCF:1173¦AACAAA¦TCF:1301¦AACAAA¦TCF:1576¦TTCAAA¦TCF:1679¦AACAAA¦TCF:1699¦AACAAA¦TCF:1748¦ATCAATG¦SOX:1970¦ATCAAA¦TCF:2003¦ATCAAAG¦SOX:2003¦ATCAAA¦TCF:2223¦AACAAA¦TCF:2266¦AACAAA¦TCF:2354¦TACAAA¦TCF:2679¦AACAAA¦TCF:2726¦ATCAAA¦TCF:2769¦TTCAAAG¦SOX:2769¦TTCAAA¦TCF:2781¦ATCAAA¦TCF:2811¦ATCAAA¦TCF:2874¦AACAAA¦TCF:2887¦ATCAAA¦TCF:2922¦ATCAAA¦TCF:2946¦TACAAA¦TCF:3150¦TTCAAAG¦SOX:3150¦TTCAAA¦TCF:3200¦AACAAA¦TCF:3272¦AACAAA¦TCF:3361¦ATCAAA¦TCF:3619¦ATCAAAG¦SOX:3619¦ATCA
BC052506 - mm5 chr19 32873116 32879274 L1Md_F2 LINE L1 404¦CATTGAA¦SOX:772¦ATCAAA¦TCF:814¦TACAAA¦TCF:835¦AACAAA¦TCF:1024¦ATCAAAG¦SOX:1024¦ATCAAA¦TCF:1165¦AACAAA¦TCF:1293¦AACAAA¦TCF:1571¦TTCAAA¦TCF:1647¦AACAAA¦TCF:1695¦AACAAA¦TCF:1744¦ATCAATG¦SOX:1782¦AACAAAG¦SOX:1782¦AACAAA¦TCF:1795¦TACAAA¦TCF:1893¦AACAAA¦TCF:1966¦ATCAAA¦TCF:1999¦ATCAAAG¦SOX:1999¦ATCAAA¦TCF:2219¦AACAAA¦TCF:2262¦AACAAA¦TCF:2350¦TTCAAA¦TCF:2416¦AACAAA¦TCF:2722¦ATCAAA¦TCF:2872¦AACAAA¦TCF:2945¦TACAAA¦TCF:2962¦AACAAA¦TCF:3151¦TTCAAAG¦SOX:3151¦TTCAAA¦TCF:3364¦ATCAAA¦TCF:3460¦AACAAA¦TCF:3621¦ATCAAAG
AB012886 insulin-like growth factor binding protein 7 mm5 chr5 76145846 76152247 L1Md_T LINE L1 972¦ATCAAA¦TCF:1014¦TACAAA¦TCF:1035¦AACAAA¦TCF:1224¦ATCAAAG¦SOX:1224¦ATCAAA¦TCF:1365¦AACAAA¦TCF:1493¦ATCAAA¦TCF:1768¦TTCAAAG¦SOX:1768¦TTCAAA¦TCF:1845¦AACAAA¦TCF:1942¦ATCAATG¦SOX:1980¦AACAAA¦TCF:2164¦ATCAAA¦TCF:2197¦ATCAAAG¦SOX:2197¦ATCAAA¦TCF:2417¦AACAAA¦TCF:2460¦AACAAA¦TCF:2548¦TTCAAA¦TCF:2614¦AACAAA¦TCF:2920¦ATCAAA¦TCF:2966¦TTCAAAG¦SOX:2966¦TTCAAA¦TCF:3070¦AACAAA¦TCF:3142¦TACAAA¦TCF:3159¦AACAAA¦TCF:3349¦TTCAAAG¦SOX:3349¦TTCAAA¦TCF:3471¦AACAAAG¦SOX:3471¦AACAAA¦TCF:3637¦ATCAATG¦SOX:3658¦AACAAA¦TCF:3820¦AT
NM_207135 olfactory receptor 1084 mm5 chr2 86539039 86545195 L1Md_F2 LINE L1 404¦AACAAA¦TCF:432¦AACAAAG¦SOX:432¦AACAAA¦TCF:786¦AACAAA¦TCF:975¦ATCAAA¦TCF:979¦AACAAA¦TCF:1116¦AACAAA¦TCF:1244¦ATCAAA¦TCF:1519¦TTCAAAG¦SOX:1519¦TTCAAA¦TCF:1601¦AACAAA¦TCF:1649¦AACAAA¦TCF:1698¦ATCAATG¦SOX:1736¦AACAAA¦TCF:1920¦ATCAAA¦TCF:1953¦ATCAAAG¦SOX:1953¦ATCAAA¦TCF:2173¦AACAAA¦TCF:2216¦AACAAA¦TCF:2304¦TACAAA¦TCF:2370¦AACAAA¦TCF:2676¦ATCAAA¦TCF:2722¦TTCAAAG¦SOX:2722¦TTCAAA¦TCF:2826¦AACAAA¦TCF:2898¦TACAAAG¦SOX:2898¦TACAAA¦TCF:2914¦AACAAA¦TCF:3105¦TTCAAAG¦SOX:3105¦TTCAAA¦TCF:3317¦ATCAAA¦TCF:3392¦ATCAATG¦
AK016561 deafness, autosomal dominant 5 protein mm5 chr6 50215591 50221639 L1Md_A LINE L1 415¦AACAAAG¦SOX:415¦AACAAA¦TCF:645¦AACAAA¦TCF:649¦AACAAA¦TCF:841¦ATCAAAG¦SOX:841¦ATCAAA¦TCF:975¦AACAAA¦TCF:1103¦AACAAA¦TCF:1378¦TTCAAAG¦SOX:1378¦TTCAAA¦TCF:1455¦AACAAA¦TCF:1503¦AACAAA¦TCF:1552¦ATCAATG¦SOX:1774¦ATCAAA¦TCF:1807¦ATCAAAG¦SOX:1807¦ATCAAA¦TCF:2027¦AACAAA¦TCF:2070¦AACAAA¦TCF:2158¦TACAAA¦TCF:2270¦AACAAA¦TCF:2329¦TTTGAA¦TCF:2484¦AACAAA¦TCF:2531¦ATCAAA¦TCF:2574¦TTCAAAG¦SOX:2574¦TTCAAA¦TCF:2678¦AACAAA¦TCF:2750¦TACAAA¦TCF:2767¦AACAAA¦TCF:2975¦TTCAAAG¦SOX:2975¦TTCAAA¦TCF:3097¦AACAAAG¦SOX:3097¦AACAAA¦T
NM_134217 vomeronasal 1 receptor, H8 mm5 chr13 21978427 21984618 L1Md_A LINE L1 826¦AACAAA¦TCF:1026¦TACAAA¦TCF:1156¦AACAAA¦TCF:1284¦AACAAA¦TCF:1559¦TTCAAAG¦SOX:1559¦TTCAAA¦TCF:1636¦AACAAA¦TCF:1684¦AACAAA¦TCF:1733¦ATCAATG¦SOX:1955¦ATCAAA¦TCF:1988¦ATCAAAG¦SOX:1988¦ATCAAA¦TCF:2143¦TTCAAAG¦SOX:2143¦TTCAAA¦TCF:2208¦AACAAA¦TCF:2251¦AACAAA¦TCF:2339¦TACAAA¦TCF:2757¦TTCAAAG¦SOX:2757¦TTCAAA¦TCF:2861¦AACAAA¦TCF:2933¦TACAAA¦TCF:2950¦AACAAA¦TCF:3140¦TTCAAAG¦SOX:3140¦TTCAAA¦TCF:3262¦AACAAAG¦SOX:3262¦AACAAA¦TCF:3428¦ATCAATG¦SOX:3449¦AACAAA¦TCF:3611¦ATCAAAG¦SOX:3611¦ATCAAA¦TCF:3732¦AACAAA¦TCF:3753¦T
NM_146605 olfactory receptor 828 mm5 chr9 18686415 18692472 L1_Mus2 LINE L1 445¦ATCAAAG¦SOX:445¦ATCAAA¦TCF:456¦AACAAA¦TCF:697¦AACAAAG¦SOX:697¦AACAAA¦TCF:1009¦ATCAAAG¦SOX:1009¦ATCAAA¦TCF:1051¦ATCAAAG¦SOX:1051¦ATCAAA¦TCF:1192¦AACAAA¦TCF:1280¦AACAAA¦TCF:1312¦ATCAAA¦TCF:1537¦AACAAA¦TCF:1558¦AACAAA¦TCF:1672¦AACAAA¦TCF:1720¦AACAAA¦TCF:1769¦ATCAATG¦SOX:1820¦TACAAA¦TCF:1841¦TTTGTA¦TCF:1990¦ATCAAA¦TCF:2069¦TTCAAA¦TCF:2172¦ATCAATG¦SOX:2233¦ATCAAA¦TCF:2237¦AACAAA¦TCF:2280¦AACAAA¦TCF:2367¦TACAAA¦TCF:2436¦AACAAA¦TCF:2534¦CTTTGTA¦SOX:2535¦TTTGTA¦TCF:2679¦ATCAAAG¦SOX:2679¦ATCAAA¦TCF:2692¦AACAAA
AF544402 testis-expressed transmembrane 4 mm5 chr19 10301475 10307974 L1Md_T LINE L1 952¦ATCAAA¦TCF:994¦TACAAA¦TCF:1015¦AACAAAG¦SOX:1015¦AACAAA¦TCF:1205¦ATCAAAG¦SOX:1205¦ATCAAA¦TCF:1346¦AACAAA¦TCF:1475¦AACAAA¦TCF:1536¦TACAAAG¦SOX:1536¦TACAAA¦TCF:1750¦TTCAAAG¦SOX:1750¦TTCAAA¦TCF:1791¦AACAATG¦SOX:1827¦AACAAA¦TCF:1925¦ATCAATG¦SOX:1963¦AACAAA¦TCF:2147¦ATCAAA¦TCF:2180¦ATCAAAG¦SOX:2180¦ATCAAA¦TCF:2401¦AACAAA¦TCF:2444¦AACAAA¦TCF:2532¦TACAAA¦TCF:2598¦AACAAA¦TCF:3016¦ATCAAA¦TCF:3062¦TTCAAAG¦SOX:3062¦TTCAAA¦TCF:3166¦AACAAA¦TCF:3238¦TACAAA¦TCF:3255¦AACAAA¦TCF:3445¦TTCAAAG¦SOX:3445¦TTCAAA¦TCF:3569¦AA
AK018876 zona pellucida binding protein mm5 chr11 11182017 11189321 L1Md_T LINE L1 1843¦ATCAAA¦TCF:1885¦TACAAA¦TCF:1906¦AACAAA¦TCF:2095¦ATCAAAG¦SOX:2095¦ATCAAA¦TCF:2236¦AACAAA¦TCF:2364¦ATCAAA¦TCF:2639¦TTCAAAG¦SOX:2639¦TTCAAA¦TCF:2716¦AACAAA¦TCF:2813¦ATCAATG¦SOX:2851¦AACAAA¦TCF:3035¦ATCAAA¦TCF:3068¦ATCAAAG¦SOX:3068¦ATCAAA¦TCF:3288¦AACAAA¦TCF:3331¦AACAAA¦TCF:3419¦TTCAAA¦TCF:3485¦AACAAA¦TCF:3791¦ATCAAA¦TCF:3837¦TTCAAAG¦SOX:3837¦TTCAAA¦TCF:3941¦AACAAA¦TCF:4013¦TACAAA¦TCF:4030¦AACAAA¦TCF:4220¦TTCAAAG¦SOX:4220¦TTCAAA¦TCF:4342¦AACAAAG¦SOX:4342¦AACAAA¦TCF:4508¦ATCAATG¦SOX:4529¦AACAAA¦TCF:4691¦A
BC057961 limb and neural patterns mm5 chr2 74479032 74485137 L1Md_F2 LINE L1 186¦CTTTGTT¦SOX:187¦TTTGTT¦TCF:358¦CATTGAA¦SOX:787¦AACAAA¦TCF:907¦AACAAA¦TCF:976¦ATCAAAG¦SOX:976¦ATCAAA¦TCF:1114¦TTCAAA¦TCF:1242¦AACAAA¦TCF:1515¦TTCAAA¦TCF:1574¦AACAAA¦TCF:1622¦AACAAA¦TCF:1671¦ATCAATG¦SOX:1893¦ATCAAA¦TCF:1926¦ATCAAAG¦SOX:1926¦ATCAAA¦TCF:2081¦ATCAATG¦SOX:2187¦AACAAA¦TCF:2275¦TACAAA¦TCF:2600¦AACAAA¦TCF:2647¦ATCAAA¦TCF:2676¦AACAAA¦TCF:2690¦TTCAAAG¦SOX:2690¦TTCAAA¦TCF:2790¦AACAAA¦TCF:2879¦AACAAA¦TCF:3073¦TTCAAAG¦SOX:3073¦TTCAAA¦TCF:3195¦AACAAAG¦SOX:3195¦AACAAA¦TCF:3235¦ATCAATG¦SOX:3286¦ATCAAA
NM_207151 olfactory receptor 1308 mm5 chr2 111858042 111864217 L1Md_T LINE L1 803¦AACAAA¦TCF:865¦AACAATG¦SOX:1132¦AACAAA¦TCF:1257¦AACAAA¦TCF:1492¦AACAAA¦TCF:1535¦TTCAAAG¦SOX:1535¦TTCAAA¦TCF:1589¦AACAAA¦TCF:1612¦AACAAA¦TCF:1660¦AACAAA¦TCF:1709¦ATCAATG¦SOX:1919¦ATCAAA¦TCF:1952¦ATCAAAG¦SOX:1952¦ATCAAA¦TCF:2026¦CATTGAA¦SOX:2059¦CATTGAA¦SOX:2172¦AACAAA¦TCF:2215¦AACAAA¦TCF:2303¦TACAAA¦TCF:2675¦ATCAAA¦TCF:2721¦TTCAAAG¦SOX:2721¦TTCAAA¦TCF:2897¦TACAAA¦TCF:2914¦AACAAA¦TCF:3105¦TTCAAAG¦SOX:3105¦TTCAAA¦TCF:3227¦AACAAAG¦SOX:3227¦AACAAA¦TCF:3393¦ATCAATG¦SOX:3414¦AACAAA¦TCF:3576¦ATCAAAG¦SOX:3576¦
BC061154 chitinase 3-like 3 mm5 chr3 106489735 106495866 L1Md_F2 LINE L1 1010¦TACAAA¦TCF:1140¦AACAAA¦TCF:1268¦AACAAA¦TCF:1543¦TTCAAAG¦SOX:1543¦TTCAAA¦TCF:1620¦AACAAA¦TCF:1668¦AACAAA¦TCF:1717¦ATCAATG¦SOX:1939¦ATCAAA¦TCF:1972¦ATCAAAG¦SOX:1972¦ATCAAA¦TCF:2068¦TTCAAAG¦SOX:2068¦TTCAAA¦TCF:2189¦AACAAA¦TCF:2202¦AACAAA¦TCF:2232¦AACAAA¦TCF:2692¦ATCAAA¦TCF:2735¦TTCAAAG¦SOX:2735¦TTCAAA¦TCF:2839¦AACAAA¦TCF:2911¦TACAAA¦TCF:2928¦AACAAA¦TCF:2988¦TTTGAA¦TCF:3114¦TTCAAAG¦SOX:3114¦TTCAAA¦TCF:3236¦AACAAAG¦SOX:3236¦AACAAA¦TCF:3252¦TTCAAA¦TCF:3315¦ATCAAAG¦SOX:3315¦ATCAAA¦TCF:3391¦TACAAA¦TCF:3422¦A
BC050875 Rho GTPase activating protein 11A mm5 chr2 113743123 113749439 L1Md_T LINE L1 894¦ATCAAA¦TCF:936¦TACAAA¦TCF:957¦AACAAA¦TCF:1146¦ATCAAAG¦SOX:1146¦ATCAAA¦TCF:1287¦AACAAA¦TCF:1415¦AACAAA¦TCF:1476¦TACAAAG¦SOX:1476¦TACAAA¦TCF:1690¦TTCAAAG¦SOX:1690¦TTCAAA¦TCF:1732¦AACAATG¦SOX:1768¦AACAAA¦TCF:1865¦ATCAATG¦SOX:1903¦AACAAA¦TCF:2087¦ATCAAA¦TCF:2110¦CTTTGTT¦SOX:2111¦TTTGTT¦TCF:2120¦ATCAAAG¦SOX:2120¦ATCAAA¦TCF:2340¦AACAAA¦TCF:2383¦AACAAA¦TCF:2537¦AACAAA¦TCF:2834¦ATCAAA¦TCF:2880¦TTCAAAG¦SOX:2880¦TTCAAA¦TCF:2984¦AACAAA¦TCF:3056¦TACAAA¦TCF:3073¦AACAAA¦TCF:3263¦TTCAAAG¦SOX:3263¦TTCAAA¦TCF:3385¦AAC
BC034064 - mm5 chr6 136828007 136834010 L1Md_F2 LINE L1 628¦AACAAA¦TCF:816¦ATCAAAG¦SOX:816¦ATCAAA¦TCF:827¦TACAAA¦TCF:875¦TACAATG¦SOX:957¦AACAAA¦TCF:1085¦AACAAA¦TCF:1360¦TTCAAAG¦SOX:1360¦TTCAAA¦TCF:1485¦AACAAA¦TCF:1534¦ATCAATG¦SOX:1756¦ATCAAA¦TCF:1789¦ATCAAAG¦SOX:1789¦ATCAAA¦TCF:2009¦AACAAA¦TCF:2052¦AACAAA¦TCF:2140¦TACAAA¦TCF:2206¦AACAAA¦TCF:2465¦AACAAA¦TCF:2512¦ATCAAA¦TCF:2558¦TTCAAAG¦SOX:2558¦TTCAAA¦TCF:2662¦AACAAA¦TCF:2734¦TACAAA¦TCF:2751¦AACAAA¦TCF:2943¦TTCAAAG¦SOX:2943¦TTCAAA¦TCF:3065¦AACAAAG¦SOX:3065¦AACAAA¦TCF:3156¦ATCAAA¦TCF:3231¦ATCAATG¦SOX:3252¦AACAAA
AK010659 thymosin, beta 4, X chromosome mm5 chrX 157326028 157332863 L1Md_T LINE L1 1418¦ATCAAA¦TCF:1460¦TACAAA¦TCF:1481¦AACAAA¦TCF:1670¦ATCAAAG¦SOX:1670¦ATCAAA¦TCF:1811¦AACAAA¦TCF:1939¦ATCAAA¦TCF:2214¦TTCAAAG¦SOX:2214¦TTCAAA¦TCF:2291¦AACAAA¦TCF:2388¦ATCAATG¦SOX:2426¦AACAAA¦TCF:2610¦ATCAAA¦TCF:2643¦ATCAAAG¦SOX:2643¦ATCAAA¦TCF:2863¦AACAAA¦TCF:2906¦AACAAA¦TCF:2994¦TTCAAA¦TCF:3060¦AACAAA¦TCF:3366¦ATCAAA¦TCF:3412¦TTCAAAG¦SOX:3412¦TTCAAA¦TCF:3516¦AACAAA¦TCF:3588¦TACAAA¦TCF:3605¦AACAAA¦TCF:3795¦TTCAAAG¦SOX:3795¦TTCAAA¦TCF:3917¦AACAAAG¦SOX:3917¦AACAAA¦TCF:4083¦ATCAATG¦SOX:4104¦AACAAA¦TCF:4266¦A
AK038374 - mm5 chr10 105484643 105490850 L1Md_T LINE L1 788¦ATCAAA¦TCF:830¦TACAAA¦TCF:851¦AACAAA¦TCF:1040¦ATCAAAG¦SOX:1040¦ATCAAA¦TCF:1181¦AACAAA¦TCF:1309¦AACAAA¦TCF:1541¦AACAAA¦TCF:1547¦AACAAA¦TCF:1584¦TTCAAAG¦SOX:1584¦TTCAAA¦TCF:1661¦AACAAA¦TCF:1709¦AACAAA¦TCF:1758¦ATCAATG¦SOX:1796¦AACAAA¦TCF:1980¦ATCAAA¦TCF:2013¦ATCAAAG¦SOX:2013¦ATCAAA¦TCF:2233¦AACAAA¦TCF:2276¦AACAAA¦TCF:2364¦TTCAAA¦TCF:2430¦AACAAA¦TCF:2738¦ATCAAA¦TCF:2784¦TTCAAAG¦SOX:2784¦TTCAAA¦TCF:2888¦AACAAA¦TCF:2960¦TACAAA¦TCF:2977¦AACAAA¦TCF:3167¦TTCAAAG¦SOX:3167¦TTCAAA¦TCF:3289¦AACAAAG¦SOX:3289¦AACAA
AK080256 histocompatibility 2, M region locus 9 mm5 chr17 35160066 35166487 L1_Mus1 LINE L1 182¦AACAAAG¦SOX:182¦AACAAA¦TCF:988¦AACAAA¦TCF:1098¦AACAAA¦TCF:1274¦ATCAAAG¦SOX:1274¦ATCAAA¦TCF:1415¦AACAAA¦TCF:1535¦ATCAAA¦TCF:1543¦AACAAA¦TCF:1759¦AACAAA¦TCF:1818¦TTCAAA¦TCF:1895¦AACAAA¦TCF:1943¦AACAAA¦TCF:1975¦CTTTGAT¦SOX:1976¦TTTGAT¦TCF:1992¦ATCAATG¦SOX:2043¦TACAAA¦TCF:2214¦ATCAAA¦TCF:2244¦ATCAAAG¦SOX:2244¦ATCAAA¦TCF:2464¦AACAAA¦TCF:2530¦AACAAA¦TCF:2618¦TACAAA¦TCF:2989¦TTCAAA¦TCF:3035¦TACAAAG¦SOX:3035¦TACAAA¦TCF:3139¦AACAAA¦TCF:3211¦TACAAA¦TCF:3281¦TACAAA¦TCF:3311¦ATCAAA¦TCF:3418¦TTCAAAG¦SOX:3418¦TTCAA
AK016072 SAM domain, SH3 domain and nuclear localisation mm5 chr16 76849217 76855452 L1Md_T LINE L1 806¦ATCAAA¦TCF:848¦TACAAA¦TCF:869¦AACAAA¦TCF:1058¦ATCAAAG¦SOX:1058¦ATCAAA¦TCF:1199¦AACAAA¦TCF:1327¦AACAAA¦TCF:1388¦TACAAAG¦SOX:1388¦TACAAA¦TCF:1602¦TTCAAAG¦SOX:1602¦TTCAAA¦TCF:1679¦AACAAA¦TCF:1727¦AACAAA¦TCF:1776¦ATCAATG¦SOX:1812¦AACAAA¦TCF:1996¦ATCAAA¦TCF:2029¦ATCAAAG¦SOX:2029¦ATCAAA¦TCF:2249¦AACAAA¦TCF:2292¦AACAAA¦TCF:2380¦TTCAAA¦TCF:2446¦AACAAA¦TCF:2757¦ATCAAA¦TCF:2803¦TTCAAAG¦SOX:2803¦TTCAAA¦TCF:2907¦AACAAA¦TCF:2979¦TACAAA¦TCF:2996¦AACAAA¦TCF:3186¦TTCAAAG¦SOX:3186¦TTCAAA¦TCF:3308¦AACAAAG¦SOX:3308¦AACA
BC018527 haloacid dehalogenase-like hydrolase domain mm5 chr2 151107243 151113468 L1Md_F2 LINE L1 800¦ATCAAA¦TCF:842¦TACAAA¦TCF:863¦AACAAA¦TCF:1052¦ATCAAAG¦SOX:1052¦ATCAAA¦TCF:1063¦TACAAA¦TCF:1321¦AACAAA¦TCF:1553¦AACAAA¦TCF:1596¦TTCAAAG¦SOX:1596¦TTCAAA¦TCF:1673¦AACAAA¦TCF:1720¦AACAAA¦TCF:1907¦AACAAA¦TCF:1992¦ATCAAA¦TCF:2025¦ATCAAA¦TCF:2245¦AACAAA¦TCF:2288¦AACAAA¦TCF:2376¦TACAAA¦TCF:2442¦AACAAA¦TCF:2553¦TTCAATG¦SOX:2748¦ATCAAA¦TCF:2897¦AACAAA¦TCF:2969¦TACAAA¦TCF:2986¦AACAAA¦TCF:3176¦TTCAAAG¦SOX:3176¦TTCAAA¦TCF:3389¦ATCAAA¦TCF:3485¦AACAAA¦TCF:3647¦ATCAAAG¦SOX:3647¦ATCAAA¦TCF:3733¦CATTGTA¦SOX:3768¦AACAAA
AK015711 - mm5 chr8 79683958 79691642 L1VL1 LINE L1 555¦AACAAA¦TCF:1041¦AACAAA¦TCF:1423¦TTTGTT¦TCF:1992¦TTTGTT¦TCF:2185¦TTTGTT¦TCF:2800¦ATCAAA¦TCF:3013¦AACAAA¦TCF:3203¦ATCAAAG¦SOX:3203¦ATCAAA¦TCF:3235¦AACAAA¦TCF:3344¦AACAAA¦TCF:3469¦AACAAA¦TCF:3707¦AACAAA¦TCF:3744¦TTCAAAG¦SOX:3744¦TTCAAA¦TCF:3820¦AACAAA¦TCF:3865¦AACAATG¦SOX:3916¦ATCAATG¦SOX:3954¦AACAAA¦TCF:3986¦TTTGTT¦TCF:4138¦ATCAAA¦TCF:4221¦TTCAAA¦TCF:4326¦ATCAATG¦SOX:4365¦TACAATG¦SOX:4391¦AACAAA¦TCF:4404¦AACAAA¦TCF:4434¦AACAAA¦TCF:4476¦TTCAAA¦TCF:4520¦TACAAA¦TCF:4779¦TTCAAA¦TCF:4840¦AACAAA¦TCF:4887¦ATCA
BC029177 eukaryotic translation initiation factor 3, mm5 chr15 43305032 43311469 L1Md_F2 LINE L1 492¦AACAATG¦SOX:694¦AACAAA¦TCF:1000¦TACAAA¦TCF:1311¦ATCAAAG¦SOX:1311¦ATCAAA¦TCF:1452¦AACAAA¦TCF:1580¦AACAAA¦TCF:1932¦AACAAA¦TCF:1960¦AACAAA¦TCF:1980¦AACAAA¦TCF:2029¦ATCAATG¦SOX:2067¦AACAAA¦TCF:2224¦AACAAA¦TCF:2251¦ATCAAA¦TCF:2284¦ATCAAAG¦SOX:2284¦ATCAAA¦TCF:2504¦AACAAA¦TCF:2547¦AACAAA¦TCF:2635¦TACAAA¦TCF:2701¦AACAAA¦TCF:2959¦AACAAA¦TCF:3006¦ATCAAA¦TCF:3052¦TTCAAAG¦SOX:3052¦TTCAAA¦TCF:3155¦AACAAA¦TCF:3227¦TACAAA¦TCF:3244¦AACAAA¦TCF:3556¦AACAAAG¦SOX:3556¦AACAAA¦TCF:3647¦ATCAAA¦TCF:3743¦AACAAA¦TCF:3905¦ATCAA
AF011425 vomeronasal 2, receptor, 15 mm5 chr7 3862440 3868443 L1Md_F2 LINE L1 389¦AACAAA¦TCF:629¦AACAAA¦TCF:836¦TACAAA¦TCF:852¦TTCAAA¦TCF:935¦ATCAAAG¦SOX:935¦ATCAAA¦TCF:959¦AACAAA¦TCF:1087¦AACAAA¦TCF:1318¦AACAAA¦TCF:1347¦AACAAA¦TCF:1361¦TTCAAA¦TCF:1485¦AACAAA¦TCF:1542¦TTCAATG¦SOX:1755¦ATCAAA¦TCF:1788¦ATCAAAG¦SOX:1788¦ATCAAA¦TCF:2008¦AACAAA¦TCF:2139¦TACAAA¦TCF:2243¦AACAATG¦SOX:2457¦AACAAA¦TCF:2550¦TTCAAAG¦SOX:2550¦TTCAAA¦TCF:2560¦CATTGAA¦SOX:2654¦AACAAA¦TCF:2726¦TACAAA¦TCF:2743¦AACAAA¦TCF:2798¦ATCAAAG¦SOX:2798¦ATCAAA¦TCF:2955¦TTCAAAG¦SOX:2955¦TTCAAA¦TCF:2982¦TACAAA¦TCF:3076¦AACAAAG¦
AK037173 transmembrane protease, serine 11f mm5 chr5 85386774 85393432 L1Md_T LINE L1 1229¦ATCAAA¦TCF:1271¦TACAAA¦TCF:1292¦AACAAA¦TCF:1481¦ATCAAAG¦SOX:1481¦ATCAAA¦TCF:1622¦AACAAA¦TCF:1750¦ATCAAA¦TCF:2025¦TTCAAAG¦SOX:2025¦TTCAAA¦TCF:2102¦AACAAA¦TCF:2199¦ATCAATG¦SOX:2237¦AACAAA¦TCF:2421¦ATCAAA¦TCF:2454¦ATCAAAG¦SOX:2454¦ATCAAA¦TCF:2674¦AACAAA¦TCF:2717¦AACAAA¦TCF:2805¦TTCAAA¦TCF:2871¦AACAAA¦TCF:3177¦ATCAAA¦TCF:3223¦TTCAAAG¦SOX:3223¦TTCAAA¦TCF:3327¦AACAAA¦TCF:3399¦TACAAA¦TCF:3416¦AACAAA¦TCF:3606¦TTCAAAG¦SOX:3606¦TTCAAA¦TCF:3728¦AACAAAG¦SOX:3728¦AACAAA¦TCF:3894¦ATCAATG¦SOX:3915¦AACAAA¦TCF:4077¦A
U02600 X-linked lymphocyte-regulated 3b mm5 chrX 64826479 64833583 L1Md_T LINE L1 1673¦ATCAAA¦TCF:1715¦TACAAA¦TCF:1736¦AACAAA¦TCF:1925¦ATCAAAG¦SOX:1925¦ATCAAA¦TCF:2066¦AACAAA¦TCF:2194¦ATCAAA¦TCF:2469¦TTCAAAG¦SOX:2469¦TTCAAA¦TCF:2547¦AACAAA¦TCF:2644¦ATCAATG¦SOX:2682¦AACAAA¦TCF:2866¦ATCAAA¦TCF:2899¦ATCAAAG¦SOX:2899¦ATCAAA¦TCF:3119¦AACAAA¦TCF:3162¦AACAAA¦TCF:3250¦TTCAAA¦TCF:3316¦AACAAA¦TCF:3622¦ATCAAA¦TCF:3668¦TTCAAAG¦SOX:3668¦TTCAAA¦TCF:3772¦AACAAA¦TCF:3844¦TACAAA¦TCF:3861¦AACAAA¦TCF:4051¦TTCAAAG¦SOX:4051¦TTCAAA¦TCF:4173¦AACAAAG¦SOX:4173¦AACAAA¦TCF:4339¦ATCAATG¦SOX:4360¦AACAAA¦TCF:4522¦A
L08266 Fanconi anemia, complementation group C mm5 chr13 61770541 61776765 L1Md_T LINE L1 796¦ATCAAA¦TCF:838¦TACAAA¦TCF:859¦AACAAA¦TCF:1048¦ATCAAAG¦SOX:1048¦ATCAAA¦TCF:1189¦AACAAA¦TCF:1317¦ATCAAA¦TCF:1592¦TTCAAAG¦SOX:1592¦TTCAAA¦TCF:1669¦AACAAA¦TCF:1766¦ATCAATG¦SOX:1804¦AACAAA¦TCF:1988¦ATCAAA¦TCF:2021¦ATCAAAG¦SOX:2021¦ATCAAA¦TCF:2241¦AACAAA¦TCF:2284¦AACAAA¦TCF:2372¦TTCAAA¦TCF:2438¦AACAAA¦TCF:2744¦ATCAAA¦TCF:2790¦TTCAAAG¦SOX:2790¦TTCAAA¦TCF:2894¦AACAAA¦TCF:2966¦TACAAA¦TCF:2983¦AACAAA¦TCF:3173¦TTCAAAG¦SOX:3173¦TTCAAA¦TCF:3295¦AACAAAG¦SOX:3295¦AACAAA¦TCF:3461¦ATCAATG¦SOX:3482¦AACAAA¦TCF:3644¦ATCA
NM_146266 olfactory receptor 772 mm5 chr10 129288087 129294246 L1Md_F3 LINE L1 313¦TTTGAA¦TCF:996¦ATCAAAG¦SOX:996¦ATCAAA¦TCF:1007¦TACAAA¦TCF:1137¦AACAAA¦TCF:1265¦AACAAA¦TCF:1509¦TTCAAA¦TCF:1540¦TTCAAAG¦SOX:1540¦TTCAAA¦TCF:1617¦AACAAA¦TCF:1665¦AACAAA¦TCF:1714¦ATCAATG¦SOX:1904¦ATCAAA¦TCF:1935¦ATCAAA¦TCF:1968¦ATCAAA¦TCF:2123¦ATCAATG¦SOX:2188¦AACAAA¦TCF:2231¦AACAAA¦TCF:2319¦TACAAA¦TCF:2379¦TTCAAA¦TCF:2691¦ATCAAA¦TCF:2737¦TTCAAAG¦SOX:2737¦TTCAAA¦TCF:2840¦AACAAA¦TCF:2912¦TACAAA¦TCF:2929¦AACAAA¦TCF:3120¦TTCAAAG¦SOX:3120¦TTCAAA¦TCF:3333¦ATCAAA¦TCF:3408¦ATCAATG¦SOX:3429¦AACAAA¦TCF:3526¦ATCAA
AK015535 - mm5 chr17 4082060 4088220 L1Md_A LINE L1 794¦AACAAA¦TCF:983¦ATCAAAG¦SOX:983¦ATCAAA¦TCF:994¦TACAAA¦TCF:1124¦AACAAA¦TCF:1252¦AACAAA¦TCF:1527¦TTCAAAG¦SOX:1527¦TTCAAA¦TCF:1604¦AACAAA¦TCF:1652¦AACAAA¦TCF:1701¦ATCAATG¦SOX:1923¦ATCAAA¦TCF:1956¦ATCAAAG¦SOX:1956¦ATCAAA¦TCF:2111¦TTCAAAG¦SOX:2111¦TTCAAA¦TCF:2176¦AACAAA¦TCF:2219¦AACAAA¦TCF:2307¦TACAAA¦TCF:2679¦ATCAAA¦TCF:2725¦TTCAAAG¦SOX:2725¦TTCAAA¦TCF:2829¦AACAAA¦TCF:2901¦TACAAA¦TCF:2918¦AACAAA¦TCF:3108¦TTCAAAG¦SOX:3108¦TTCAAA¦TCF:3230¦AACAAAG¦SOX:3230¦AACAAA¦TCF:3396¦ATCAATG¦SOX:3417¦AACAAA¦TCF:3579¦ATCA
AK036343 - mm5 chrX 96265159 96271964 L1Md_T LINE L1 1377¦ATCAAA¦TCF:1419¦TACAAA¦TCF:1440¦AACAAA¦TCF:1629¦ATCAAAG¦SOX:1629¦ATCAAA¦TCF:1770¦AACAAA¦TCF:1898¦ATCAAA¦TCF:2173¦TTCAAAG¦SOX:2173¦TTCAAA¦TCF:2250¦AACAAA¦TCF:2347¦ATCAATG¦SOX:2385¦AACAAA¦TCF:2569¦ATCAAA¦TCF:2602¦ATCAAAG¦SOX:2602¦ATCAAA¦TCF:2822¦AACAAA¦TCF:2865¦AACAAA¦TCF:2953¦TTCAAA¦TCF:3019¦AACAAA¦TCF:3325¦ATCAAA¦TCF:3371¦TTCAAAG¦SOX:3371¦TTCAAA¦TCF:3475¦AACAAA¦TCF:3547¦TACAAA¦TCF:3564¦AACAAA¦TCF:3754¦TTCAAAG¦SOX:3754¦TTCAAA¦TCF:3876¦AACAAAG¦SOX:3876¦AACAAA¦TCF:4042¦ATCAATG¦SOX:4063¦AACAAA¦TCF:4225¦A
AY512919 - mm5 chr8 42268284 42274397 L1Md_A LINE L1 836¦AACAAA¦TCF:1025¦ATCAAAG¦SOX:1025¦ATCAAA¦TCF:1036¦TACAAA¦TCF:1166¦AACAAA¦TCF:1294¦AACAAA¦TCF:1569¦TTCAAAG¦SOX:1569¦TTCAAA¦TCF:1646¦AACAAA¦TCF:1694¦AACAAA¦TCF:2831¦ATCAAA¦TCF:2877¦TTCAAAG¦SOX:2877¦TTCAAA¦TCF:2981¦AACAAA¦TCF:3053¦TACAAA¦TCF:3070¦AACAAA¦TCF:3260¦TTCAAAG¦SOX:3260¦TTCAAA¦TCF:3552¦ATCAATG¦SOX:3573¦AACAAA¦TCF:3735¦ATCAAAG¦SOX:3735¦ATCAAA¦TCF:3828¦CTTTGAA¦SOX:3829¦TTTGAA¦TCF:3857¦AACAAA¦TCF:3878¦TACAAA¦TCF:4170¦TTCAAA¦TCF:4250¦CATTGTA¦SOX:4290¦TTCAATG¦SOX:4305¦ATCAAA¦TCF:4368¦AACAAA¦TCF:5010¦A
AK031121 C-type lectin-like receptor-1 mm5 chr6 130115251 130121375 L1Md_F3 LINE L1 321¦TTCAAA¦TCF:988¦ATCAAAG¦SOX:988¦ATCAAA¦TCF:999¦TACAAA¦TCF:1106¦AACAAA¦TCF:1296¦TACAAAG¦SOX:1296¦TACAAA¦TCF:1510¦TTCAAAG¦SOX:1510¦TTCAAA¦TCF:1587¦AACAAA¦TCF:1635¦AACAAA¦TCF:1906¦ATCAAA¦TCF:1939¦ATCAAAG¦SOX:1939¦ATCAAA¦TCF:2094¦ATCAATG¦SOX:2159¦AACAAA¦TCF:2202¦AACAAA¦TCF:2660¦ATCAAA¦TCF:2706¦TTCAAAG¦SOX:2706¦TTCAAA¦TCF:2810¦AACAAA¦TCF:2882¦TACAAA¦TCF:2899¦AACAAA¦TCF:3088¦TTCAAAG¦SOX:3088¦TTCAAA¦TCF:3210¦AACAAAG¦SOX:3210¦AACAAA¦TCF:3376¦ATCAATG¦SOX:3397¦AACAAA¦TCF:3559¦ATCAAAG¦SOX:3559¦ATCAAA¦TCF:3680¦AAC
BC030485 fibroblast growth factor 12 isoform b mm5 chr16 28031031 28037382 L1Md_T LINE L1 996¦ATCAAA¦TCF:1038¦TACAAA¦TCF:1059¦AACAAA¦TCF:1248¦ATCAAAG¦SOX:1248¦ATCAAA¦TCF:1389¦AACAAA¦TCF:1517¦ATCAAA¦TCF:1792¦TTCAAAG¦SOX:1792¦TTCAAA¦TCF:1869¦AACAAA¦TCF:1966¦ATCAATG¦SOX:2004¦AACAAA¦TCF:2190¦ATCAAA¦TCF:2224¦ATCAAAG¦SOX:2224¦ATCAAA¦TCF:2444¦AACAAA¦TCF:2487¦AACAAA¦TCF:2575¦TTCAAA¦TCF:2641¦AACAAA¦TCF:2947¦ATCAAA¦TCF:2993¦TTCAAAG¦SOX:2993¦TTCAAA¦TCF:3098¦AACAAA¦TCF:3171¦TACAAA¦TCF:3188¦AACAAA¦TCF:3378¦TTCAAAG¦SOX:3378¦TTCAAA¦TCF:3502¦AACAAAG¦SOX:3502¦AACAAA¦TCF:3668¦ATCAATG¦SOX:3690¦AACAAA¦TCF:4134¦TT
BC012227 major urinary protein 4 mm5 chr4 59233367 59239624 L1Md_F2 LINE L1 827¦ATCAAA¦TCF:869¦TACAAA¦TCF:890¦AACAAA¦TCF:1079¦ATCAAAG¦SOX:1079¦ATCAAA¦TCF:1216¦AACAAA¦TCF:1344¦AACAAA¦TCF:1484¦TACAAA¦TCF:1619¦TTCAAAG¦SOX:1619¦TTCAAA¦TCF:1671¦TACAAA¦TCF:1697¦AACAAA¦TCF:1745¦AACAAA¦TCF:1794¦ATCAATG¦SOX:1832¦AACAAA¦TCF:2016¦ATCAAA¦TCF:2049¦ATCAAAG¦SOX:2049¦ATCAAA¦TCF:2269¦AACAAA¦TCF:2312¦AACAAA¦TCF:2400¦ATCAAA¦TCF:2466¦AACAAA¦TCF:2577¦TTCAATG¦SOX:2772¦ATCAAA¦TCF:2921¦AACAAA¦TCF:2993¦TACAAA¦TCF:3010¦AACAAA¦TCF:3200¦TTCAAAG¦SOX:3200¦TTCAAA¦TCF:3413¦ATCAAA¦TCF:3488¦ATCAATG¦SOX:3509¦AACAA
AK053210 - mm5 chr5 80344315 80350573 L1Md_A LINE L1 845¦AACAAA¦TCF:1045¦TACAAA¦TCF:1175¦AACAAA¦TCF:1303¦AACAAA¦TCF:1545¦AACAAA¦TCF:1582¦TTCAAAG¦SOX:1582¦TTCAAA¦TCF:1659¦AACAAA¦TCF:1707¦AACAAA¦TCF:1757¦ATCAATG¦SOX:1981¦ATCAAA¦TCF:2015¦ATCAAAG¦SOX:2015¦ATCAAA¦TCF:2171¦TTCAAAG¦SOX:2171¦TTCAAA¦TCF:2236¦AACAAA¦TCF:2279¦AACAAA¦TCF:2367¦TACAAA¦TCF:2821¦TTCAAAG¦SOX:2821¦TTCAAA¦TCF:2926¦AACAAA¦TCF:2998¦TACAAA¦TCF:3015¦AACAAA¦TCF:3205¦TTCAAAG¦SOX:3205¦TTCAAA¦TCF:3328¦AACAAAG¦SOX:3328¦AACAAA¦TCF:3497¦ATCAATG¦SOX:3680¦ATCAAAG¦SOX:3680¦ATCAAA¦TCF:3801¦AACAAA¦TCF:3822¦T
AK076999 - mm5 chr4 30658137 30664461 L1Md_F2 LINE L1 639¦AACAAA¦TCF:763¦ATCAAA¦TCF:955¦TTCAAA¦TCF:976¦AACAAA¦TCF:1162¦AACAATG¦SOX:1177¦TACAAA¦TCF:1435¦AACAAA¦TCF:1710¦TTCAAAG¦SOX:1710¦TTCAAA¦TCF:1787¦AACAAA¦TCF:1835¦AACAAA¦TCF:2139¦ATCAAAG¦SOX:2139¦ATCAAA¦TCF:2291¦ATCAATG¦SOX:2356¦AACAAA¦TCF:2399¦AACAAA¦TCF:2487¦TACAAA¦TCF:2495¦CATTGAA¦SOX:2617¦CTTTGAT¦SOX:2618¦TTTGAT¦TCF:2813¦AACAAA¦TCF:2860¦ATCAAA¦TCF:3007¦AACAAA¦TCF:3056¦TACAAA¦TCF:3079¦TACAAA¦TCF:3096¦AACAAA¦TCF:3286¦TTCAAAG¦SOX:3286¦TTCAAA¦TCF:3408¦AACAAAG¦SOX:3408¦AACAAA¦TCF:3575¦ATCAAAG¦SOX:3575¦ATCA
NM_207551 olfactory receptor 208 mm5 chr16 59620151 59626496 L1Md_F2 LINE L1 750¦CTTTGAT¦SOX:751¦TTTGAT¦TCF:1063¦ATCAAAG¦SOX:1063¦ATCAAA¦TCF:1074¦TACAAA¦TCF:1097¦TTCAAA¦TCF:1191¦AACAAA¦TCF:1204¦AACAAA¦TCF:1548¦AACAAA¦TCF:1607¦TTCAAA¦TCF:1684¦AACAAA¦TCF:1781¦ATCAATG¦SOX:2003¦ATCAAA¦TCF:2027¦TTTGTA¦TCF:2036¦ATCAAAG¦SOX:2036¦ATCAAA¦TCF:2256¦AACAAA¦TCF:2299¦AACAAA¦TCF:2387¦TACAAA¦TCF:2453¦AACAAA¦TCF:2759¦ATCAAA¦TCF:2805¦TTCAAAG¦SOX:2805¦TTCAAA¦TCF:2908¦AACAAA¦TCF:2980¦TACAAA¦TCF:2997¦AACAAA¦TCF:3187¦TTCAAAG¦SOX:3187¦TTCAAA¦TCF:3398¦ATCAAA¦TCF:3473¦ATCAATG¦SOX:3494¦AACAAA¦TCF:3656¦ATCA
AF167568 opioid receptor, mu 1 mm5 chr10 3563964 3570238 L1Md_F2 LINE L1 1060¦ATCAAAG¦SOX:1060¦ATCAAA¦TCF:1201¦AACAAA¦TCF:1329¦AACAAA¦TCF:1405¦ATCAAA¦TCF:1488¦TACAAA¦TCF:1690¦AACAAA¦TCF:1738¦AACAAA¦TCF:2051¦AACAAA¦TCF:2062¦ATCAAA¦TCF:2251¦ATCAATG¦SOX:2316¦AACAAA¦TCF:2359¦AACAAA¦TCF:2447¦TACAAA¦TCF:2865¦TTCAAAG¦SOX:2865¦TTCAAA¦TCF:2896¦CTTTGAA¦SOX:2897¦TTTGAA¦TCF:2970¦AACAAA¦TCF:3042¦TACAAA¦TCF:3059¦AACAAA¦TCF:3248¦TTCAAAG¦SOX:3248¦TTCAAA¦TCF:3371¦AACAAAG¦SOX:3371¦AACAAA¦TCF:3462¦ATCAAA¦TCF:3558¦AACAAA¦TCF:3720¦ATCAAAG¦SOX:3720¦ATCAAA¦TCF:3806¦CATTGTA¦SOX:3841¦AACAAA¦TCF:4158¦C
NM_207550 olfactory receptor 199 mm5 chr16 59479297 59485813 L1Md_A LINE L1 320¦TTCAAA¦TCF:987¦ATCAAAG¦SOX:987¦ATCAAA¦TCF:1128¦AACAAA¦TCF:1183¦TACAAA¦TCF:1257¦AACAAA¦TCF:1413¦TACAAA¦TCF:1531¦TTCAAAG¦SOX:1531¦TTCAAA¦TCF:1608¦AACAAA¦TCF:1612¦AACAAA¦TCF:1655¦AACAAA¦TCF:1704¦ATCAATG¦SOX:1840¦AACAAA¦TCF:1869¦AACAAA¦TCF:1925¦ATCAAA¦TCF:2177¦AACAAA¦TCF:2220¦AACAAA¦TCF:2308¦TACAAA¦TCF:2511¦TTCAAA¦TCF:2572¦TTCAAA¦TCF:2592¦ATCAAA¦TCF:2679¦ATCAAA¦TCF:2725¦TTCAAAG¦SOX:2725¦TTCAAA¦TCF:2829¦AACAAA¦TCF:2901¦TACAAA¦TCF:2918¦AACAAA¦TCF:3110¦TTCAAAG¦SOX:3110¦TTCAAA¦TCF:3232¦AACAAAG¦SOX:3232¦AACAAA
AK006905 polymerase (DNA directed), iota mm5 chr18 71038026 71044192 L1Md_T LINE L1 737¦ATCAAA¦TCF:779¦TACAAA¦TCF:800¦AACAAA¦TCF:989¦ATCAAAG¦SOX:989¦ATCAAA¦TCF:1130¦AACAAA¦TCF:1258¦AACAAA¦TCF:1319¦TACAAAG¦SOX:1319¦TACAAA¦TCF:1533¦TTCAAAG¦SOX:1533¦TTCAAA¦TCF:1574¦AACAATG¦SOX:1610¦AACAAA¦TCF:1658¦AACAAA¦TCF:1707¦ATCAATG¦SOX:1745¦AACAAA¦TCF:1929¦ATCAAA¦TCF:1952¦CTTTGTT¦SOX:1953¦TTTGTT¦TCF:1962¦ATCAAAG¦SOX:1962¦ATCAAA¦TCF:2182¦AACAAA¦TCF:2225¦AACAAA¦TCF:2313¦TTCAAA¦TCF:2379¦AACAAA¦TCF:2685¦ATCAAA¦TCF:2731¦TTCAAAG¦SOX:2731¦TTCAAA¦TCF:2835¦AACAAA¦TCF:2907¦TACAAA¦TCF:2924¦AACAAA¦TCF:3114¦TTCAAA
AK046091 expressed sequence AI604832 mm5 chr9 122307948 122314146 L1Md_A LINE L1 836¦AACAAA¦TCF:1036¦TACAAA¦TCF:1166¦AACAAA¦TCF:1294¦AACAAA¦TCF:1569¦TTCAAAG¦SOX:1569¦TTCAAA¦TCF:1646¦AACAAA¦TCF:1694¦AACAAA¦TCF:1743¦ATCAATG¦SOX:1965¦ATCAAA¦TCF:1998¦ATCAAAG¦SOX:1998¦ATCAAA¦TCF:2153¦TTCAAAG¦SOX:2153¦TTCAAA¦TCF:2218¦AACAAA¦TCF:2261¦AACAAA¦TCF:2349¦TACAAA¦TCF:2721¦ATCAAA¦TCF:2767¦TTCAAAG¦SOX:2767¦TTCAAA¦TCF:2871¦AACAAA¦TCF:2943¦TACAAA¦TCF:2960¦AACAAA¦TCF:3150¦TTCAAAG¦SOX:3150¦TTCAAA¦TCF:3272¦AACAAAG¦SOX:3272¦AACAAA¦TCF:3438¦ATCAATG¦SOX:3459¦AACAAA¦TCF:3621¦ATCAAAG¦SOX:3621¦ATCAAA¦TCF:3742¦A
AK031422 RIKEN cDNA 9430028L06 mm5 chr18 63552578 63558783 L1Md_T LINE L1 777¦ATCAAA¦TCF:819¦TACAAA¦TCF:840¦AACAAA¦TCF:1029¦ATCAAAG¦SOX:1029¦ATCAAA¦TCF:1170¦AACAAA¦TCF:1298¦ATCAAA¦TCF:1573¦TTCAAAG¦SOX:1573¦TTCAAA¦TCF:1650¦AACAAA¦TCF:1747¦ATCAATG¦SOX:1785¦AACAAA¦TCF:1969¦ATCAAA¦TCF:2002¦ATCAAAG¦SOX:2002¦ATCAAA¦TCF:2222¦AACAAA¦TCF:2265¦AACAAA¦TCF:2353¦TTCAAA¦TCF:2419¦AACAAA¦TCF:2725¦ATCAAA¦TCF:2771¦TTCAAAG¦SOX:2771¦TTCAAA¦TCF:2875¦AACAAA¦TCF:2947¦TACAAA¦TCF:2964¦AACAAA¦TCF:3154¦TTCAAAG¦SOX:3154¦TTCAAA¦TCF:3276¦AACAAAG¦SOX:3276¦AACAAA¦TCF:3442¦ATCAATG¦SOX:3463¦AACAAA¦TCF:3625¦ATCA
AF016463 ADP-ribosyltransferase 2b mm5 chr7 88931400 88937778 L1Md_F2 LINE L1 956¦AACAAA¦TCF:1145¦ATCAAAG¦SOX:1145¦ATCAAA¦TCF:1286¦AACAAA¦TCF:1414¦AACAAA¦TCF:1646¦AACAAA¦TCF:1689¦TTCAAAG¦SOX:1689¦TTCAAA¦TCF:1711¦AACAAA¦TCF:1716¦AACAAA¦TCF:1721¦AACAAA¦TCF:1726¦AACAAA¦TCF:1784¦AACAAA¦TCF:1832¦AACAAA¦TCF:1881¦ATCAATG¦SOX:2103¦ATCAAA¦TCF:2136¦ATCAAAG¦SOX:2136¦ATCAAA¦TCF:2291¦ATCAATG¦SOX:2356¦AACAAA¦TCF:2399¦AACAAA¦TCF:2487¦TACAAA¦TCF:2812¦AACAAA¦TCF:2901¦TTCAAAG¦SOX:2901¦TTCAAA¦TCF:3005¦AACAAA¦TCF:3077¦TACAAA¦TCF:3094¦AACAAA¦TCF:3165¦ATCAAA¦TCF:3238¦AACAAA¦TCF:3244¦AACAAA¦TCF:3250¦AACA
BC026928 solute carrier family 26, member 7 mm5 chr4 14552939 14559822 L1Md_T LINE L1 1452¦ATCAAA¦TCF:1494¦TACAAA¦TCF:1515¦AACAAA¦TCF:1704¦ATCAAAG¦SOX:1704¦ATCAAA¦TCF:1845¦AACAAA¦TCF:1973¦AACAAA¦TCF:2034¦TACAAAG¦SOX:2034¦TACAAA¦TCF:2248¦TTCAAAG¦SOX:2248¦TTCAAA¦TCF:2289¦AACAATG¦SOX:2325¦AACAAA¦TCF:2373¦AACAAA¦TCF:2422¦ATCAATG¦SOX:2460¦AACAAA¦TCF:2644¦ATCAAA¦TCF:2667¦CTTTGTT¦SOX:2668¦TTTGTT¦TCF:2677¦ATCAAAG¦SOX:2677¦ATCAAA¦TCF:2897¦AACAAA¦TCF:2940¦AACAAA¦TCF:3028¦TTCAAA¦TCF:3094¦AACAAA¦TCF:3400¦ATCAAA¦TCF:3446¦TTCAAAG¦SOX:3446¦TTCAAA¦TCF:3550¦AACAAA¦TCF:3622¦TACAAA¦TCF:3639¦AACAAA¦TCF:3829¦T
AK012838 tumor necrosis factor receptor superfamily, mm5 chr7 131358087 131364274 L1Md_T LINE L1 320¦TTCAAA¦TCF:816¦AACAAA¦TCF:1016¦TACAAA¦TCF:1146¦AACAAA¦TCF:1274¦AACAAA¦TCF:1549¦TTCAAAG¦SOX:1549¦TTCAAA¦TCF:1603¦AACAAA¦TCF:1626¦AACAAA¦TCF:1674¦AACAAA¦TCF:1723¦ATCAATG¦SOX:1945¦ATCAAA¦TCF:1978¦ATCAAAG¦SOX:1978¦ATCAAA¦TCF:2133¦ATCAATG¦SOX:2198¦AACAAA¦TCF:2241¦AACAAA¦TCF:2329¦TACAAA¦TCF:2706¦ATCAAA¦TCF:2856¦AACAAA¦TCF:2905¦TACAAA¦TCF:2928¦TACAAA¦TCF:2945¦AACAAA¦TCF:2998¦TACAAA¦TCF:3137¦TTCAAAG¦SOX:3137¦TTCAAA¦TCF:3259¦AACAAAG¦SOX:3259¦AACAAA¦TCF:3425¦ATCAATG¦SOX:3446¦AACAAA¦TCF:3608¦ATCAAAG¦SOX:3608¦ATC
AK083009 Kruppel-like zinc finger protein mm5 chr8 68658976 68665046 L1VL2 LINE L1 757¦ATCAAA¦TCF:777¦AACAAA¦TCF:812¦AACAATG¦SOX:1037¦AACAAA¦TCF:1107¦AACAAA¦TCF:1227¦ATCAAA¦TCF:1510¦TACAAA¦TCF:1590¦AACAAA¦TCF:1669¦ATCAATG¦SOX:1860¦ATCAAA¦TCF:1891¦ATCAAA¦TCF:1915¦TTCAAA¦TCF:2144¦ATCAAA¦TCF:2344¦AACAAA¦TCF:2350¦AACAATG¦SOX:2395¦TTCAATG¦SOX:2600¦AACAAA¦TCF:2647¦ATCAAA¦TCF:2675¦TACAAA¦TCF:2679¦AACAAA¦TCF:2693¦TACAAAG¦SOX:2693¦TACAAA¦TCF:2704¦AACAAA¦TCF:2868¦TACAAA¦TCF:2955¦ATCAAA¦TCF:3286¦ATCAAA¦TCF:3343¦TTCAATG¦SOX:3361¦ATCAATG¦SOX:3382¦AACAAA¦TCF:3441¦AACAAA¦TCF:3546¦ATCAAA¦TCF:3667¦AACAA
AF047725 cytochrome P450, family 2, subfamily c, mm5 chr19 38748929 38755300 L1Md_T LINE L1 1013¦AACAAA¦TCF:1213¦TACAAA¦TCF:1343¦AACAAA¦TCF:1471¦AACAAA¦TCF:1746¦TTCAAAG¦SOX:1746¦TTCAAA¦TCF:1823¦AACAAA¦TCF:1871¦AACAAA¦TCF:1920¦ATCAATG¦SOX:1942¦TACAAAG¦SOX:1942¦TACAAA¦TCF:2142¦ATCAAA¦TCF:2175¦ATCAAAG¦SOX:2175¦ATCAAA¦TCF:2331¦ATCAATG¦SOX:2396¦AACAAA¦TCF:2437¦AACAAA¦TCF:2525¦TACAAA¦TCF:2830¦AACAAA¦TCF:2897¦ATCAAA¦TCF:2943¦TTCAAAG¦SOX:2943¦TTCAAA¦TCF:2974¦CTTTGAA¦SOX:2975¦TTTGAA¦TCF:3047¦AACAAA¦TCF:3119¦TACAAA¦TCF:3136¦AACAAA¦TCF:3328¦TTCAAAG¦SOX:3328¦TTCAAA¦TCF:3450¦AACAAAG¦SOX:3450¦AACAAA¦TCF:3616¦
AK006683 thioredoxin domain containing 8 mm5 chr4 57280084 57286295 L1Md_T LINE L1 781¦ATCAAA¦TCF:823¦TACAAA¦TCF:844¦AACAAA¦TCF:1033¦ATCAAAG¦SOX:1033¦ATCAAA¦TCF:1174¦AACAAA¦TCF:1302¦ATCAAA¦TCF:1577¦TTCAAAG¦SOX:1577¦TTCAAA¦TCF:1654¦AACAAA¦TCF:1751¦ATCAATG¦SOX:1789¦AACAAA¦TCF:1973¦ATCAAA¦TCF:2006¦ATCAAAG¦SOX:2006¦ATCAAA¦TCF:2226¦AACAAA¦TCF:2269¦AACAAA¦TCF:2357¦TTCAAA¦TCF:2423¦AACAAA¦TCF:2729¦ATCAAA¦TCF:2775¦TTCAAAG¦SOX:2775¦TTCAAA¦TCF:2879¦AACAAA¦TCF:2951¦TACAAA¦TCF:2968¦AACAAA¦TCF:3158¦TTCAAAG¦SOX:3158¦TTCAAA¦TCF:3280¦AACAAAG¦SOX:3280¦AACAAA¦TCF:3446¦ATCAATG¦SOX:3467¦AACAAA¦TCF:3629¦ATCA
AB061229 olfactory receptor 74 mm5 chr2 87871230 87877265 L1Md_F2 LINE L1 677¦AACAAA¦TCF:1028¦AACAAA¦TCF:1156¦AACAAA¦TCF:1394¦ATCAAA¦TCF:1431¦TTCAAAG¦SOX:1431¦TTCAAA¦TCF:1507¦AACAAA¦TCF:1555¦ATCAAA¦TCF:1604¦ATCAATG¦SOX:1826¦ATCAAA¦TCF:1859¦ATCAAAG¦SOX:1859¦ATCAAA¦TCF:2013¦ATCAATG¦SOX:2078¦AACAAA¦TCF:2121¦AACAAA¦TCF:2209¦TACAAA¦TCF:2275¦AACAAA¦TCF:2534¦AACAAA¦TCF:2581¦ATCAAA¦TCF:2627¦TTCAAAG¦SOX:2627¦TTCAAA¦TCF:2635¦ATCAAA¦TCF:2731¦AACAAA¦TCF:2803¦TACAAA¦TCF:2820¦AACAAA¦TCF:2943¦CATTGAT¦SOX:3011¦TTCAAAG¦SOX:3011¦TTCAAA¦TCF:3086¦TTCAATG¦SOX:3223¦ATCAAA¦TCF:3319¦AACAAA¦TCF:3325¦TT
BC031887 Sac domain-containing inositol phosphatase 3 mm5 chr10 41212977 41219833 L1Md_T LINE L1 1427¦ATCAAA¦TCF:1469¦TACAAA¦TCF:1490¦AACAAA¦TCF:1679¦ATCAAAG¦SOX:1679¦ATCAAA¦TCF:1820¦AACAAA¦TCF:1948¦ATCAAA¦TCF:2223¦TTCAAAG¦SOX:2223¦TTCAAA¦TCF:2300¦AACAAA¦TCF:2397¦ATCAATG¦SOX:2435¦AACAAA¦TCF:2619¦ATCAAA¦TCF:2652¦ATCAAAG¦SOX:2652¦ATCAAA¦TCF:2872¦AACAAA¦TCF:2915¦AACAAA¦TCF:3003¦TTCAAA¦TCF:3069¦AACAAA¦TCF:3375¦ATCAAA¦TCF:3421¦TTCAAAG¦SOX:3421¦TTCAAA¦TCF:3525¦AACAAA¦TCF:3597¦TACAAA¦TCF:3614¦AACAAA¦TCF:3804¦TTCAAAG¦SOX:3804¦TTCAAA¦TCF:3926¦AACAAAG¦SOX:3926¦AACAAA¦TCF:4092¦ATCAATG¦SOX:4113¦AACAAA¦TCF:4275¦A
BC008555 cDNA sequence BC011487 mm5 chr6 42583364 42589638 L1Md_F2 LINE L1 893¦AACAAA¦TCF:934¦AACAAA¦TCF:1123¦ATCAAAG¦SOX:1123¦ATCAAA¦TCF:1264¦AACAAA¦TCF:1666¦TTCAAAG¦SOX:1666¦TTCAAA¦TCF:1743¦AACAAA¦TCF:1752¦AACAAA¦TCF:1791¦AACAAA¦TCF:1840¦ATCAATG¦SOX:2031¦ATCAAA¦TCF:2062¦ATCAAA¦TCF:2095¦ATCAAAG¦SOX:2095¦ATCAAA¦TCF:2250¦ATCAATG¦SOX:2315¦AACAAA¦TCF:2358¦AACAAA¦TCF:2622¦TTCAATG¦SOX:2662¦AACAAA¦TCF:2774¦AACAAA¦TCF:2821¦ATCAAA¦TCF:2853¦AACAAA¦TCF:2867¦TTCAAAG¦SOX:2867¦TTCAAA¦TCF:2970¦AACAAA¦TCF:3042¦TACAAA¦TCF:3059¦AACAAA¦TCF:3251¦TTCAAA¦TCF:3374¦AACAAA¦TCF:3465¦ATCAAA¦TCF:3540¦ATCA
NM_146464 olfactory receptor 1196 mm5 chr2 88599133 88605640 L1Md_T LINE L1 1077¦ATCAAA¦TCF:1119¦TACAAA¦TCF:1140¦AACAAA¦TCF:1329¦ATCAAAG¦SOX:1329¦ATCAAA¦TCF:1470¦AACAAA¦TCF:1598¦ATCAAA¦TCF:1873¦TTCAAAG¦SOX:1873¦TTCAAA¦TCF:1950¦AACAAA¦TCF:2047¦ATCAATG¦SOX:2085¦AACAAA¦TCF:2269¦ATCAAA¦TCF:2302¦ATCAAAG¦SOX:2302¦ATCAAA¦TCF:2522¦AACAAA¦TCF:2565¦AACAAA¦TCF:2653¦TTCAAA¦TCF:2719¦AACAAA¦TCF:3025¦ATCAAA¦TCF:3071¦TTCAAAG¦SOX:3071¦TTCAAA¦TCF:3175¦AACAAA¦TCF:3247¦TACAAA¦TCF:3264¦AACAAA¦TCF:3454¦TTCAAAG¦SOX:3454¦TTCAAA¦TCF:3576¦AACAAAG¦SOX:3576¦AACAAA¦TCF:3742¦ATCAATG¦SOX:3763¦AACAAA¦TCF:3925¦A
AK005297 transcription elongation factor A (SII)-like 3 mm5 chrX 125219832 125226049 L1Md_F2 LINE L1 911¦CTTTGAT¦SOX:912¦TTTGAT¦TCF:1011¦AACAAA¦TCF:1200¦ATCAAAG¦SOX:1200¦ATCAAA¦TCF:1341¦AACAAA¦TCF:1818¦AACAAA¦TCF:1863¦AACAAA¦TCF:1912¦ATCAATG¦SOX:2134¦ATCAAA¦TCF:2168¦ATCAAAG¦SOX:2168¦ATCAAA¦TCF:2202¦TTCAAA¦TCF:2275¦CATTGTA¦SOX:2323¦ATCAATG¦SOX:2388¦AACAAA¦TCF:2431¦AACAAA¦TCF:2519¦TACAAA¦TCF:2680¦AACAAA¦TCF:2877¦AACAAA¦TCF:2926¦TTCAAA¦TCF:2949¦TACAAA¦TCF:2966¦AACAAA¦TCF:3156¦TTCAAAG¦SOX:3156¦TTCAAA¦TCF:3323¦TACAAA¦TCF:3369¦ATCAAA¦TCF:3444¦ATCAATG¦SOX:3465¦AACAAA¦TCF:3519¦TTTGAA¦TCF:3625¦ATCAAAG¦SOX:3625¦AT
AK089774 - mm5 chr1 147188758 147195132 L1Md_A LINE L1 1008¦AACAAA¦TCF:1208¦TACAAA¦TCF:1338¦AACAAA¦TCF:1466¦AACAAA¦TCF:1741¦TTCAAAG¦SOX:1741¦TTCAAA¦TCF:1818¦AACAAA¦TCF:1866¦AACAAA¦TCF:1915¦ATCAATG¦SOX:2137¦ATCAAA¦TCF:2170¦ATCAAAG¦SOX:2170¦ATCAAA¦TCF:2325¦TTCAAAG¦SOX:2325¦TTCAAA¦TCF:2390¦AACAAA¦TCF:2433¦AACAAA¦TCF:2521¦TACAAA¦TCF:2893¦ATCAAA¦TCF:2939¦TTCAAAG¦SOX:2939¦TTCAAA¦TCF:3043¦AACAAA¦TCF:3115¦TACAAA¦TCF:3132¦AACAAA¦TCF:3322¦TTCAAAG¦SOX:3322¦TTCAAA¦TCF:3444¦AACAAAG¦SOX:3444¦AACAAA¦TCF:3610¦ATCAATG¦SOX:3631¦AACAAA¦TCF:3793¦ATCAAAG¦SOX:3793¦ATCAAA¦TCF:3914¦
NM_146779 olfactory receptor 196 mm5 chr16 59429649 59436737 L1Md_T LINE L1 1659¦ATCAAA¦TCF:1701¦TACAAA¦TCF:1722¦AACAAA¦TCF:1911¦ATCAAAG¦SOX:1911¦ATCAAA¦TCF:2052¦AACAAA¦TCF:2180¦ATCAAA¦TCF:2455¦TTCAAAG¦SOX:2455¦TTCAAA¦TCF:2532¦AACAAA¦TCF:2629¦ATCAATG¦SOX:2667¦AACAAA¦TCF:2851¦ATCAAA¦TCF:2884¦ATCAAAG¦SOX:2884¦ATCAAA¦TCF:3104¦AACAAA¦TCF:3147¦AACAAA¦TCF:3235¦TTCAAA¦TCF:3301¦AACAAA¦TCF:3607¦ATCAAA¦TCF:3653¦TTCAAAG¦SOX:3653¦TTCAAA¦TCF:3757¦AACAAA¦TCF:3829¦TACAAA¦TCF:3846¦AACAAA¦TCF:4036¦TTCAAAG¦SOX:4036¦TTCAAA¦TCF:4158¦AACAAAG¦SOX:4158¦AACAAA¦TCF:4324¦ATCAATG¦SOX:4345¦AACAAA¦TCF:4507¦A
BC030487 FUN14 domain containing 1 mm5 chrX 15905753 15912345 L1_Mus3 LINE L1 1060¦AACAAA¦TCF:1249¦ATCAAAG¦SOX:1249¦ATCAAA¦TCF:1394¦AACAAA¦TCF:1522¦AACAAA¦TCF:1738¦AACAAAG¦SOX:1738¦AACAAA¦TCF:1797¦TTCAAAG¦SOX:1797¦TTCAAA¦TCF:1874¦AACAAA¦TCF:1921¦AACAAA¦TCF:2113¦AACAAA¦TCF:2231¦ATCAAAG¦SOX:2231¦ATCAAA¦TCF:2338¦CATTGTA¦SOX:2386¦ATCAATG¦SOX:2451¦AACAAA¦TCF:2494¦AACAAA¦TCF:2576¦AACAAA¦TCF:2582¦TACAAA¦TCF:2808¦TACAAAG¦SOX:2808¦TACAAA¦TCF:3049¦AACAAA¦TCF:3087¦ATCAAA¦TCF:3119¦AACAAA¦TCF:3132¦TACAAAG¦SOX:3132¦TACAAA¦TCF:3140¦ATCAAA¦TCF:3144¦AACAAA¦TCF:3227¦AACAAA¦TCF:3299¦TACAAA¦TCF:3316¦A
BC046412 RIKEN cDNA 3110010F15 mm5 chr8 34469399 34475789 L1Md_A LINE L1 1024¦AACAAA¦TCF:1224¦TACAAA¦TCF:1354¦AACAAA¦TCF:1482¦AACAAA¦TCF:1720¦AACAAA¦TCF:1757¦TTCAAAG¦SOX:1757¦TTCAAA¦TCF:1834¦AACAAA¦TCF:1882¦AACAAA¦TCF:1931¦ATCAATG¦SOX:2153¦ATCAAA¦TCF:2186¦ATCAAAG¦SOX:2186¦ATCAAA¦TCF:2341¦TTCAATG¦SOX:2406¦AACAAA¦TCF:2449¦AACAAA¦TCF:2537¦TACAAA¦TCF:2909¦ATCAAA¦TCF:2955¦TTCAAAG¦SOX:2955¦TTCAAA¦TCF:3059¦AACAAA¦TCF:3131¦TACAAA¦TCF:3148¦AACAAA¦TCF:3338¦TTCAAAG¦SOX:3338¦TTCAAA¦TCF:3460¦AACAAAG¦SOX:3460¦AACAAA¦TCF:3626¦ATCAATG¦SOX:3647¦AACAAA¦TCF:3809¦ATCAAAG¦SOX:3809¦ATCAAA¦TCF:3930¦
AK089551 - mm5 chr2 53742629 53748639 L1Md_T LINE L1 669¦AACAAA¦TCF:869¦TACAAA¦TCF:999¦AACAAA¦TCF:1026¦AACAAAG¦SOX:1026¦AACAAA¦TCF:1125¦AACAAA¦TCF:1186¦TACAAAG¦SOX:1186¦TACAAA¦TCF:1329¦ATCAAAG¦SOX:1329¦ATCAAA¦TCF:1387¦TTCAAAG¦SOX:1387¦TTCAAA¦TCF:1464¦AACAAA¦TCF:1512¦AACAAA¦TCF:1561¦ATCAATG¦SOX:1710¦AACAAA¦TCF:1783¦ATCAAA¦TCF:1816¦ATCAAAG¦SOX:1816¦ATCAAA¦TCF:1970¦ATCAATG¦SOX:2035¦AACAAA¦TCF:2078¦AACAAA¦TCF:2166¦TACAAA¦TCF:2579¦TTCAAAG¦SOX:2579¦TTCAAA¦TCF:2683¦AACAAA¦TCF:2755¦TACAAA¦TCF:2772¦AACAAA¦TCF:2962¦TTCAAAG¦SOX:2962¦TTCAAA¦TCF:3083¦AACAAA¦TCF:3270¦AAC
AK006953 RIKEN cDNA 1700080E11 mm5 chr9 105073391 105079889 L1Md_F3 LINE L1 329¦TTCAAA¦TCF:1150¦AACAAA¦TCF:1339¦ATCAAAG¦SOX:1339¦ATCAAA¦TCF:1350¦TACAAA¦TCF:1480¦AACAAA¦TCF:1608¦AACAAA¦TCF:1883¦TTCAAAG¦SOX:1883¦TTCAAA¦TCF:1960¦AACAAA¦TCF:2058¦ATCAATG¦SOX:2280¦ATCAAA¦TCF:2313¦ATCAAAG¦SOX:2313¦ATCAAA¦TCF:2468¦ATCAATG¦SOX:2533¦AACAAA¦TCF:2576¦AACAAA¦TCF:2664¦TACAAA¦TCF:3038¦ATCAAA¦TCF:3084¦TTCAAAG¦SOX:3084¦TTCAAA¦TCF:3188¦AACAAA¦TCF:3260¦TACAAA¦TCF:3451¦TTCAAAG¦SOX:3451¦TTCAAA¦TCF:3573¦AACAAAG¦SOX:3573¦AACAAA¦TCF:3739¦ATCAATG¦SOX:3760¦AACAAA¦TCF:3922¦ATCAAAG¦SOX:3922¦ATCAAA¦TCF:4043¦
AK004804 MAD homolog 4 mm5 chr18 74207947 74214169 L1Md_T LINE L1 793¦ATCAAA¦TCF:835¦TACAAA¦TCF:856¦AACAAA¦TCF:1045¦ATCAAAG¦SOX:1045¦ATCAAA¦TCF:1186¦AACAAA¦TCF:1314¦ATCAAA¦TCF:1589¦TTCAAAG¦SOX:1589¦TTCAAA¦TCF:1666¦AACAAA¦TCF:1763¦ATCAATG¦SOX:1801¦AACAAA¦TCF:1985¦ATCAAA¦TCF:2018¦ATCAAAG¦SOX:2018¦ATCAAA¦TCF:2238¦AACAAA¦TCF:2281¦AACAAA¦TCF:2369¦TTCAAA¦TCF:2435¦AACAAA¦TCF:2741¦ATCAAA¦TCF:2787¦TTCAAAG¦SOX:2787¦TTCAAA¦TCF:2891¦AACAAA¦TCF:2963¦TACAAA¦TCF:2980¦AACAAA¦TCF:3170¦TTCAAAG¦SOX:3170¦TTCAAA¦TCF:3292¦AACAAAG¦SOX:3292¦AACAAA¦TCF:3458¦ATCAATG¦SOX:3479¦AACAAA¦TCF:3641¦ATCA
NM_207235 olfactory receptor 358 mm5 chr2 36971598 36977880 L1_Mus2 LINE L1 984¦AACAAA¦TCF:1161¦ATCAAAG¦SOX:1161¦ATCAAA¦TCF:1290¦AACAAA¦TCF:1418¦AACAAA¦TCF:1693¦TTCAAAG¦SOX:1693¦TTCAAA¦TCF:1754¦AACAAAG¦SOX:1754¦AACAAA¦TCF:1770¦AACAAA¦TCF:1818¦AACAAA¦TCF:1867¦ATCAATG¦SOX:2060¦AACAAA¦TCF:2087¦ATCAAA¦TCF:2120¦ATCAAAG¦SOX:2120¦ATCAAA¦TCF:2326¦AACAAA¦TCF:2340¦AACAAA¦TCF:2383¦AACAAA¦TCF:2471¦TACAAA¦TCF:2831¦ATCAAA¦TCF:2852¦AACAAAG¦SOX:2852¦AACAAA¦TCF:2877¦TTCAAAG¦SOX:2877¦TTCAAA¦TCF:2987¦ATCAAA¦TCF:3013¦AACAAA¦TCF:3053¦TACAAA¦TCF:3070¦AACAAA¦TCF:3324¦ATCAAA¦TCF:3381¦AACAAAG¦SOX:3381¦AA
AK081008 - mm5 chrX 39784186 39791477 L1Md_T LINE L1 1503¦AACAAA¦TCF:1531¦AACAAAG¦SOX:1531¦AACAAA¦TCF:1925¦AACAAA¦TCF:2114¦ATCAAAG¦SOX:2114¦ATCAAA¦TCF:2255¦AACAAA¦TCF:2658¦TTCAAAG¦SOX:2658¦TTCAAA¦TCF:2735¦AACAAA¦TCF:2783¦AACAAA¦TCF:2832¦ATCAATG¦SOX:3054¦ATCAAA¦TCF:3087¦ATCAAAG¦SOX:3087¦ATCAAA¦TCF:3242¦ATCAATG¦SOX:3307¦AACAAA¦TCF:3350¦AACAAA¦TCF:3438¦TACAAA¦TCF:3810¦ATCAAA¦TCF:3856¦TTCAAAG¦SOX:3856¦TTCAAA¦TCF:3960¦AACAAA¦TCF:4032¦TACAAA¦TCF:4049¦AACAAA¦TCF:4239¦TTCAAAG¦SOX:4239¦TTCAAA¦TCF:4361¦AACAAAG¦SOX:4361¦AACAAA¦TCF:4527¦ATCAATG¦SOX:4548¦AACAAA¦TCF:4710
AK020535 RIKEN cDNA 9530002K18 mm5 chr18 44618975 44625160 L1Md_T LINE L1 262¦TTCAATG¦SOX:822¦AACAAA¦TCF:828¦TTCAAA¦TCF:849¦AACAAA¦TCF:1034¦ATCAAAG¦SOX:1034¦ATCAAA¦TCF:1175¦AACAAA¦TCF:1303¦AACAAA¦TCF:1535¦AACAAA¦TCF:1578¦TTCAAAG¦SOX:1578¦TTCAAA¦TCF:1611¦AACAAA¦TCF:1619¦AACAAA¦TCF:1625¦AACAAA¦TCF:1679¦AACAAA¦TCF:1727¦AACAAA¦TCF:1766¦ATCAATG¦SOX:1987¦ATCAAA¦TCF:2020¦ATCAAAG¦SOX:2020¦ATCAAA¦TCF:2175¦ATCAATG¦SOX:2240¦AACAAA¦TCF:2283¦AACAAA¦TCF:2371¦TACAAA¦TCF:2742¦ATCAAA¦TCF:2785¦TTCAAAG¦SOX:2785¦TTCAAA¦TCF:2889¦AACAAA¦TCF:2961¦TACAAA¦TCF:2978¦AACAAA¦TCF:3168¦TTCAAAG¦SOX:3168¦TTCAA
AK035025 X-linked lymphocyte-regulated protein pM1 mm5 chrX 46240733 46247075 L1Md_A LINE L1 975¦AACAAA¦TCF:1175¦TACAAA¦TCF:1305¦AACAAA¦TCF:1433¦AACAAA¦TCF:1708¦TTCAAAG¦SOX:1708¦TTCAAA¦TCF:1785¦AACAAA¦TCF:1833¦AACAAA¦TCF:1882¦ATCAATG¦SOX:2104¦ATCAAA¦TCF:2137¦ATCAAAG¦SOX:2137¦ATCAAA¦TCF:2292¦TTCAAAG¦SOX:2292¦TTCAAA¦TCF:2357¦AACAAA¦TCF:2400¦AACAAA¦TCF:2488¦TACAAA¦TCF:2860¦ATCAAA¦TCF:2906¦TTCAAAG¦SOX:2906¦TTCAAA¦TCF:3010¦AACAAA¦TCF:3082¦TACAAA¦TCF:3099¦AACAAA¦TCF:3289¦TTCAAAG¦SOX:3289¦TTCAAA¦TCF:3411¦AACAAAG¦SOX:3411¦AACAAA¦TCF:3577¦ATCAATG¦SOX:3598¦AACAAA¦TCF:3760¦ATCAAAG¦SOX:3760¦ATCAAA¦TCF:3881¦A
AK027942 RIKEN cDNA 1500011K16 mm5 chr2 127542180 127549097 L1Md_T LINE L1 1434¦ATCAAA¦TCF:1476¦TACAAA¦TCF:1497¦AACAAA¦TCF:1686¦ATCAAAG¦SOX:1686¦ATCAAA¦TCF:1827¦AACAAA¦TCF:1955¦ATCAAA¦TCF:2230¦TTCAAAG¦SOX:2230¦TTCAAA¦TCF:2307¦AACAAA¦TCF:2404¦ATCAATG¦SOX:2442¦AACAAA¦TCF:2626¦ATCAAA¦TCF:2659¦ATCAAAG¦SOX:2659¦ATCAAA¦TCF:2879¦AACAAA¦TCF:2922¦AACAAA¦TCF:3010¦TTCAAA¦TCF:3076¦AACAAA¦TCF:3379¦ATCAAA¦TCF:3425¦TTCAAAG¦SOX:3425¦TTCAAA¦TCF:3529¦AACAAA¦TCF:3601¦TACAAA¦TCF:3618¦AACAAA¦TCF:3808¦TTCAAAG¦SOX:3808¦TTCAAA¦TCF:3930¦AACAAAG¦SOX:3930¦AACAAA¦TCF:4096¦ATCAATG¦SOX:4117¦AACAAA¦TCF:4279¦A
NM_146886 olfactory receptor 1298 mm5 chr2 111541299 111547659 L1Md_A LINE L1 974¦TACAAA¦TCF:995¦AACAAA¦TCF:1195¦TACAAA¦TCF:1325¦AACAAA¦TCF:1453¦AACAAA¦TCF:1691¦AACAAA¦TCF:1728¦TTCAAAG¦SOX:1728¦TTCAAA¦TCF:1805¦AACAAA¦TCF:1853¦AACAAA¦TCF:1902¦ATCAATG¦SOX:2124¦ATCAAA¦TCF:2157¦ATCAAAG¦SOX:2157¦ATCAAA¦TCF:2312¦TTCAAAG¦SOX:2312¦TTCAAA¦TCF:2377¦AACAAA¦TCF:2420¦AACAAA¦TCF:2508¦TACAAA¦TCF:2880¦ATCAAA¦TCF:2912¦AACAAA¦TCF:2926¦TTCAAAG¦SOX:2926¦TTCAAA¦TCF:3030¦AACAAA¦TCF:3102¦TACAAA¦TCF:3119¦AACAAA¦TCF:3258¦AACAAA¦TCF:3309¦TTCAAAG¦SOX:3309¦TTCAAA¦TCF:3596¦ATCAATG¦SOX:3617¦AACAAA¦TCF:3780¦ATCA
NM_146985 olfactory receptor 1270 mm5 chr2 90049635 90055813 L1Md_A LINE L1 685¦ATCAAA¦TCF:1009¦ATCAAAG¦SOX:1009¦ATCAAA¦TCF:1020¦TACAAA¦TCF:1043¦TTCAAA¦TCF:1068¦AACAATG¦SOX:1150¦AACAAA¦TCF:1278¦AACAAA¦TCF:1553¦TTCAAAG¦SOX:1553¦TTCAAA¦TCF:1630¦AACAAA¦TCF:1678¦AACAAA¦TCF:1727¦ATCAATG¦SOX:1949¦ATCAAA¦TCF:1982¦ATCAAAG¦SOX:1982¦ATCAAA¦TCF:2137¦ATCAATG¦SOX:2202¦AACAAA¦TCF:2245¦AACAAA¦TCF:2333¦TACAAA¦TCF:2677¦AACAAAG¦SOX:2677¦AACAAA¦TCF:2751¦TTCAAAG¦SOX:2751¦TTCAAA¦TCF:2855¦AACAAA¦TCF:2904¦TTCAAA¦TCF:2927¦TACAAA¦TCF:2944¦AACAAA¦TCF:3134¦TTCAAAG¦SOX:3134¦TTCAAA¦TCF:3253¦AACAAAG¦SOX:3253¦
AJ430350 myxoid liposarcoma associated protein 4 mm5 chr16 25958852 25965062 L1Md_F2 LINE L1 994¦ATCAAAG¦SOX:994¦ATCAAA¦TCF:1005¦TACAAA¦TCF:1525¦TTCAAAG¦SOX:1525¦TTCAAA¦TCF:1602¦AACAAA¦TCF:1650¦AACAAA¦TCF:1699¦ATCAATG¦SOX:1883¦TTCAAA¦TCF:1890¦ATCAAA¦TCF:1921¦ATCAAA¦TCF:2109¦ATCAATG¦SOX:2156¦AACAAA¦TCF:2217¦AACAAA¦TCF:2305¦TACAAA¦TCF:2636¦ATCAAA¦TCF:2682¦TTCAAAG¦SOX:2682¦TTCAAA¦TCF:2694¦ATCAAAG¦SOX:2694¦ATCAAA¦TCF:2786¦AACAAA¦TCF:2858¦TACAAA¦TCF:3012¦AACAAA¦TCF:3066¦TTCAAAG¦SOX:3066¦TTCAAA¦TCF:3188¦AACAAAG¦SOX:3188¦AACAAA¦TCF:3233¦TACAAA¦TCF:3353¦ATCAATG¦SOX:3374¦AACAAA¦TCF:3537¦ATCAAAG¦SOX:3537¦A
BC035222 androgen binding protein gamma mm5 chr7 22212542 22219455 L1Md_T LINE L1 1440¦ATCAAA¦TCF:1482¦TACAAA¦TCF:1503¦AACAAA¦TCF:1692¦ATCAAAG¦SOX:1692¦ATCAAA¦TCF:1833¦AACAAA¦TCF:1961¦ATCAAA¦TCF:2236¦TTCAAAG¦SOX:2236¦TTCAAA¦TCF:2313¦AACAAA¦TCF:2410¦ATCAATG¦SOX:2448¦AACAAA¦TCF:2632¦ATCAAA¦TCF:2665¦ATCAAAG¦SOX:2665¦ATCAAA¦TCF:2885¦AACAAA¦TCF:2928¦AACAAA¦TCF:3016¦TTCAAA¦TCF:3082¦AACAAA¦TCF:3389¦ATCAAA¦TCF:3435¦TTCAAAG¦SOX:3435¦TTCAAA¦TCF:3539¦AACAAA¦TCF:3611¦TACAAA¦TCF:3628¦AACAAA¦TCF:3818¦TTCAAAG¦SOX:3818¦TTCAAA¦TCF:3940¦AACAAAG¦SOX:3940¦AACAAA¦TCF:4106¦ATCAATG¦SOX:4127¦AACAAA¦TCF:4289¦A
AK015267 - mm5 chr5 43576004 43582198 L1Md_F2 LINE L1 430¦AACAAA¦TCF:458¦AACAAAG¦SOX:458¦AACAAA¦TCF:810¦AACAAA¦TCF:999¦ATCAAAG¦SOX:999¦ATCAAA¦TCF:1140¦AACAAA¦TCF:1268¦ATCAAA¦TCF:1500¦TACAAA¦TCF:1543¦TTCAAAG¦SOX:1543¦TTCAAA¦TCF:1622¦AACAAA¦TCF:1670¦AACAAA¦TCF:1719¦ATCAATG¦SOX:1757¦AACAAA¦TCF:1940¦ATCAAA¦TCF:1973¦ATCAAAG¦SOX:1973¦ATCAAA¦TCF:2193¦AACAAA¦TCF:2236¦AACAAA¦TCF:2324¦TACAAA¦TCF:2332¦CATTGAA¦SOX:2390¦AACAAA¦TCF:2696¦ATCAAA¦TCF:2742¦TTCAAAG¦SOX:2742¦TTCAAA¦TCF:2846¦AACAAA¦TCF:2918¦TACAAA¦TCF:2935¦AACAAA¦TCF:3125¦TTCAAAG¦SOX:3125¦TTCAAA¦TCF:3247¦AACAAAG
AK081721 - mm5 chr1 146524520 146530685 L1_Mus3 LINE L1 316¦AACAAA¦TCF:638¦AACAAA¦TCF:687¦ATCAAAG¦SOX:687¦ATCAAA¦TCF:832¦ATCAAAG¦SOX:832¦ATCAAA¦TCF:972¦AACAAA¦TCF:1097¦ATCAAA¦TCF:1113¦AACAAA¦TCF:1380¦TTCAAAG¦SOX:1380¦TTCAAA¦TCF:1457¦AACAAA¦TCF:1612¦TTTGAA¦TCF:1687¦AACAAA¦TCF:1878¦AACAAA¦TCF:1992¦ATCAAAG¦SOX:1992¦ATCAAA¦TCF:2036¦CTTTGTT¦SOX:2037¦TTTGTT¦TCF:2188¦CATTGAA¦SOX:2214¦AACAAA¦TCF:2257¦AACAAA¦TCF:2535¦AACAAA¦TCF:2663¦AACAAA¦TCF:2755¦TACAAAG¦SOX:2755¦TACAAA¦TCF:2859¦AACAAA¦TCF:2907¦ATCAAA¦TCF:2931¦TACAAA¦TCF:2948¦AACAAA¦TCF:3099¦AACAAA¦TCF:3106¦AACAAA¦TC
NM_207008 olfactory receptor GA_x5J8B7W1QE7-1953-1018 mm5 chr10 129298337 129304911 L1Md_T LINE L1 1146¦ATCAAA¦TCF:1188¦TACAAA¦TCF:1209¦AACAAA¦TCF:1398¦ATCAAAG¦SOX:1398¦ATCAAA¦TCF:1539¦AACAAA¦TCF:1667¦ATCAAA¦TCF:1942¦TTCAAAG¦SOX:1942¦TTCAAA¦TCF:2019¦AACAAA¦TCF:2116¦ATCAATG¦SOX:2154¦AACAAA¦TCF:2338¦ATCAAA¦TCF:2371¦ATCAAAG¦SOX:2371¦ATCAAA¦TCF:2591¦AACAAA¦TCF:2634¦AACAAA¦TCF:2722¦TTCAAA¦TCF:2788¦AACAAA¦TCF:3094¦ATCAAA¦TCF:3140¦TTCAAAG¦SOX:3140¦TTCAAA¦TCF:3244¦AACAAA¦TCF:3316¦TACAAA¦TCF:3333¦AACAAA¦TCF:3523¦TTCAAAG¦SOX:3523¦TTCAAA¦TCF:3645¦AACAAAG¦SOX:3645¦AACAAA¦TCF:3811¦ATCAATG¦SOX:3832¦AACAAA¦TCF:3994¦A
Nature Neuroscience: doi:10.1038/nn.2360
796¦ATCAAA¦TCF:838¦TACAAA¦TCF:859¦AACAAA¦TCF:1048¦ATCAAAG¦SOX:1048¦ATCAAA¦TCF:1189¦AACAAA¦TCF:1317¦ATCAAA¦TCF:1592¦TTCAAAG¦SOX:1592¦TTCAAA¦TCF:1669¦AACAAA¦TCF:1766¦ATCAATG¦SOX:1804¦AACAAA¦TCF:1988¦ATCAAA¦TCF:2021¦ATCAAAG¦SOX:2021¦ATCAAA¦TCF:2242¦AACAAA¦TCF:2285¦AACAAA¦TCF:2373¦TTCAAA¦TCF:2439¦AACAAA¦TCF:2745¦ATCAAA¦TCF:2791¦TTCAAAG¦SOX:2791¦TTCAAA¦TCF:2895¦AACAAA¦TCF:2967¦TACAAA¦TCF:2984¦AACAAA¦TCF:3174¦TTCAAAG¦SOX:3174¦TTCAAA¦TCF:3296¦AACAAAG¦SOX:3296¦AACAAA¦TCF:3462¦ATCAATG¦SOX:3483¦AACAAA¦TCF:3627¦AACAAA¦TCF:3645¦ATCAAAG¦SOX:3645¦ATCAAA¦TCF:3766¦AACAAA¦TCF:3787¦TACAAA¦TCF:4157¦CATTGTA¦SOX:4197¦TTCAATG¦SOX:4275¦AACAAA¦TCF:4917¦ATCAAA¦TCF:4954¦AACAAAG¦SOX:4954¦AACAAA¦TCF:5041¦ATCAAA¦TCF:5089¦ATCAAA¦TCF:5149¦CATTGTT¦SOX:5658¦AACAAA¦TCF:5687¦AACAAAG¦SOX:56
639¦TTTGAA¦TCF:801¦AACAAA¦TCF:990¦ATCAAAG¦SOX:990¦ATCAAA¦TCF:1131¦AACAAA¦TCF:1259¦AACAAA¦TCF:1414¦AACAAA¦TCF:1497¦ATCAAA¦TCF:1534¦TTCAAAG¦SOX:1534¦TTCAAA¦TCF:1619¦AACAAA¦TCF:1667¦AACAAA¦TCF:1716¦ATCAATG¦SOX:1938¦ATCAAA¦TCF:1959¦ATCAAAG¦SOX:1959¦ATCAAA¦TCF:1994¦TTTGAT¦TCF:2114¦ATCAATG¦SOX:2222¦AACAAA¦TCF:2310¦TACAAA¦TCF:2390¦TACAAAG¦SOX:2390¦TACAAA¦TCF:2634¦AACAAA¦TCF:2681¦ATCAAA¦TCF:2727¦TTCAAAG¦SOX:2727¦TTCAAA¦TCF:2831¦AACAAA¦TCF:2903¦TACAAA¦TCF:2920¦AACAAA¦TCF:3323¦ATCAAA¦TCF:3419¦AACAAA¦TCF:3431¦AACAAA¦TCF:3581¦ATCAAAG¦SOX:3581¦ATCAAA¦TCF:3702¦AACAAA¦TCF:3723¦TACAAA¦TCF:3867¦AACAAA¦TCF:4037¦ATCAAAG¦SOX:4037¦ATCAAA¦TCF:4133¦TTCAATG¦SOX:4148¦ATCAAA¦TCF:4331¦TACAATG¦SOX:4457¦AACAAA¦TCF:4523¦CTTTGTA¦SOX:4524¦TTTGTA¦TCF:4535¦ATCAAA¦TCF:4852¦ATCAAA¦TCF:4888¦
536¦AACAAA¦TCF:818¦AACAAA¦TCF:1018¦TACAAA¦TCF:1148¦AACAAA¦TCF:1276¦AACAAA¦TCF:1514¦AACAAA¦TCF:1551¦TTCAAAG¦SOX:1551¦TTCAAA¦TCF:1628¦AACAAA¦TCF:1676¦AACAAA¦TCF:1725¦ATCAATG¦SOX:1947¦ATCAAA¦TCF:1980¦ATCAAAG¦SOX:1980¦ATCAAA¦TCF:2135¦TTCAAAG¦SOX:2135¦TTCAAA¦TCF:2186¦AACAAA¦TCF:2243¦AACAAA¦TCF:2331¦TACAAA¦TCF:2703¦ATCAAA¦TCF:2749¦TTCAAAG¦SOX:2749¦TTCAAA¦TCF:2853¦AACAAA¦TCF:2925¦TACAAA¦TCF:2942¦AACAAA¦TCF:3132¦TTCAAAG¦SOX:3132¦TTCAAA¦TCF:3254¦AACAAAG¦SOX:3254¦AACAAA¦TCF:3294¦ATCAATG¦SOX:3420¦ATCAATG¦SOX:3441¦AACAAA¦TCF:3602¦ATCAAAG¦SOX:3602¦ATCAAA¦TCF:3723¦AACAAA¦TCF:3744¦TACAAA¦TCF:3910¦TACAAAG¦SOX:3910¦TACAAA¦TCF:4034¦TTCAAA¦TCF:4114¦CATTGTA¦SOX:4154¦TTCAATG¦SOX:4169¦ATCAAA¦TCF:4232¦AACAAA¦TCF:4873¦ATCAAA¦TCF:4910¦AACAAAG¦SOX:4910¦AACAAA¦TCF:4997¦ATCAAA¦TCF:5
748¦ATCAAA¦TCF:790¦TACAAA¦TCF:811¦AACAAA¦TCF:1000¦ATCAAAG¦SOX:1000¦ATCAAA¦TCF:1141¦AACAAA¦TCF:1269¦ATCAAA¦TCF:1544¦TTCAAAG¦SOX:1544¦TTCAAA¦TCF:1621¦AACAAA¦TCF:1718¦ATCAATG¦SOX:1756¦AACAAA¦TCF:1940¦ATCAAA¦TCF:1973¦ATCAAAG¦SOX:1973¦ATCAAA¦TCF:2193¦AACAAA¦TCF:2236¦AACAAA¦TCF:2324¦TTCAAA¦TCF:2390¦AACAAA¦TCF:2696¦ATCAAA¦TCF:2742¦TTCAAAG¦SOX:2742¦TTCAAA¦TCF:2846¦AACAAA¦TCF:2918¦TACAAA¦TCF:2935¦AACAAA¦TCF:3125¦TTCAAAG¦SOX:3125¦TTCAAA¦TCF:3247¦AACAAAG¦SOX:3247¦AACAAA¦TCF:3413¦ATCAATG¦SOX:3434¦AACAAA¦TCF:3596¦ATCAAAG¦SOX:3596¦ATCAAA¦TCF:3717¦AACAAA¦TCF:3738¦TACAAA¦TCF:4108¦CATTGTA¦SOX:4148¦TTCAATG¦SOX:4226¦AACAAA¦TCF:4867¦ATCAAA¦TCF:4904¦AACAAAG¦SOX:4904¦AACAAA¦TCF:4991¦ATCAAA¦TCF:5039¦ATCAAA¦TCF:5099¦CATTGTT¦SOX:5608¦AACAAA¦TCF:5637¦AACAAAG¦SOX:5637¦AACAAA¦TCF:59
1620¦AACAAA¦TCF:1820¦TACAAA¦TCF:1950¦AACAAA¦TCF:2078¦AACAAA¦TCF:2353¦TTCAAAG¦SOX:2353¦TTCAAA¦TCF:2430¦AACAAA¦TCF:2478¦AACAAA¦TCF:2527¦ATCAATG¦SOX:2749¦ATCAAA¦TCF:2782¦ATCAAAG¦SOX:2782¦ATCAAA¦TCF:2937¦TTCAAAG¦SOX:2937¦TTCAAA¦TCF:3002¦AACAAA¦TCF:3045¦AACAAA¦TCF:3133¦TACAAA¦TCF:3505¦ATCAAA¦TCF:3551¦TTCAAAG¦SOX:3551¦TTCAAA¦TCF:3655¦AACAAA¦TCF:3727¦TACAAA¦TCF:3744¦AACAAA¦TCF:3934¦TTCAAAG¦SOX:3934¦TTCAAA¦TCF:4056¦AACAAAG¦SOX:4056¦AACAAA¦TCF:4222¦ATCAATG¦SOX:4243¦AACAAA¦TCF:4405¦ATCAAAG¦SOX:4405¦ATCAAA¦TCF:4526¦AACAAA¦TCF:4547¦TACAAA¦TCF:4713¦TACAAAG¦SOX:4713¦TACAAA¦TCF:4837¦TTCAAA¦TCF:4917¦CATTGTA¦SOX:4957¦TTCAATG¦SOX:4972¦ATCAAA¦TCF:5035¦AACAAA¦TCF:5676¦ATCAAA¦TCF:5713¦AACAAAG¦SOX:5713¦AACAAA¦TCF:5800¦ATCAAA¦TCF:5848¦ATCAAA¦TCF:5908¦CATTGTT¦SOX:6417¦AACAAA¦TCF
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Nature Neuroscience: doi:10.1038/nn.2360
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994¦ATCAAAG¦SOX:994¦ATCAAA¦TCF:1005¦TACAAA¦TCF:1525¦TTCAAAG¦SOX:1525¦TTCAAA¦TCF:1602¦AACAAA¦TCF:1650¦AACAAA¦TCF:1699¦ATCAATG¦SOX:1883¦TTCAAA¦TCF:1890¦ATCAAA¦TCF:1921¦ATCAAA¦TCF:2109¦ATCAATG¦SOX:2156¦AACAAA¦TCF:2217¦AACAAA¦TCF:2305¦TACAAA¦TCF:2636¦ATCAAA¦TCF:2682¦TTCAAAG¦SOX:2682¦TTCAAA¦TCF:2694¦ATCAAAG¦SOX:2694¦ATCAAA¦TCF:2786¦AACAAA¦TCF:2858¦TACAAA¦TCF:3012¦AACAAA¦TCF:3066¦TTCAAAG¦SOX:3066¦TTCAAA¦TCF:3188¦AACAAAG¦SOX:3188¦AACAAA¦TCF:3233¦TACAAA¦TCF:3353¦ATCAATG¦SOX:3374¦AACAAA¦TCF:3537¦ATCAAAG¦SOX:3537¦ATCAAA¦TCF:3623¦CATTGTA¦SOX:3658¦AACAAA¦TCF:3669¦ATCAAAG¦SOX:3669¦ATCAAA¦TCF:3679¦TACAAA¦TCF:3902¦TACAAAG¦SOX:3902¦TACAAA¦TCF:3981¦AACAAAG¦SOX:3981¦AACAAA¦TCF:4049¦CATTGTA¦SOX:4089¦TTCAATG¦SOX:4104¦ATCAAA¦TCF:4167¦AACAAA¦TCF:4414¦AACAAA¦TCF:4801¦ATCAAA¦TCF:4837¦AACAAAG¦SOX:4837¦AACAAA¦TCF:4925¦ATCAAA¦TCF:4959¦TTCAAA¦TCF:5265¦TACAAA¦TCF:5498¦AACAAAG¦SOX:5498¦AACAAA¦TCF:5543¦AACAAA¦TCF:6015¦ATCAAA¦TCF:
1440¦ATCAAA¦TCF:1482¦TACAAA¦TCF:1503¦AACAAA¦TCF:1692¦ATCAAAG¦SOX:1692¦ATCAAA¦TCF:1833¦AACAAA¦TCF:1961¦ATCAAA¦TCF:2236¦TTCAAAG¦SOX:2236¦TTCAAA¦TCF:2313¦AACAAA¦TCF:2410¦ATCAATG¦SOX:2448¦AACAAA¦TCF:2632¦ATCAAA¦TCF:2665¦ATCAAAG¦SOX:2665¦ATCAAA¦TCF:2885¦AACAAA¦TCF:2928¦AACAAA¦TCF:3016¦TTCAAA¦TCF:3082¦AACAAA¦TCF:3389¦ATCAAA¦TCF:3435¦TTCAAAG¦SOX:3435¦TTCAAA¦TCF:3539¦AACAAA¦TCF:3611¦TACAAA¦TCF:3628¦AACAAA¦TCF:3818¦TTCAAAG¦SOX:3818¦TTCAAA¦TCF:3940¦AACAAAG¦SOX:3940¦AACAAA¦TCF:4106¦ATCAATG¦SOX:4127¦AACAAA¦TCF:4289¦ATCAAAG¦SOX:4289¦ATCAAA¦TCF:4410¦AACAAA¦TCF:4431¦TACAAA¦TCF:4801¦CATTGTA¦SOX:4841¦TTCAATG¦SOX:4919¦AACAAA¦TCF:5560¦ATCAAA¦TCF:5597¦AACAAAG¦SOX:5597¦AACAAA¦TCF:5684¦ATCAAA¦TCF:5732¦ATCAAA¦TCF:5792¦CATTGTT¦SOX:6301¦AACAAA¦TCF:6330¦AACAAAG¦SOX:6330¦AACAAA¦TCF:6666¦ATCAAA¦TCF:
430¦AACAAA¦TCF:458¦AACAAAG¦SOX:458¦AACAAA¦TCF:810¦AACAAA¦TCF:999¦ATCAAAG¦SOX:999¦ATCAAA¦TCF:1140¦AACAAA¦TCF:1268¦ATCAAA¦TCF:1500¦TACAAA¦TCF:1543¦TTCAAAG¦SOX:1543¦TTCAAA¦TCF:1622¦AACAAA¦TCF:1670¦AACAAA¦TCF:1719¦ATCAATG¦SOX:1757¦AACAAA¦TCF:1940¦ATCAAA¦TCF:1973¦ATCAAAG¦SOX:1973¦ATCAAA¦TCF:2193¦AACAAA¦TCF:2236¦AACAAA¦TCF:2324¦TACAAA¦TCF:2332¦CATTGAA¦SOX:2390¦AACAAA¦TCF:2696¦ATCAAA¦TCF:2742¦TTCAAAG¦SOX:2742¦TTCAAA¦TCF:2846¦AACAAA¦TCF:2918¦TACAAA¦TCF:2935¦AACAAA¦TCF:3125¦TTCAAAG¦SOX:3125¦TTCAAA¦TCF:3247¦AACAAAG¦SOX:3247¦AACAAA¦TCF:3263¦TTCAAA¦TCF:3287¦ATCAATG¦SOX:3338¦ATCAAA¦TCF:3413¦ATCAATG¦SOX:3434¦AACAAA¦TCF:3596¦ATCAAAG¦SOX:3596¦ATCAAA¦TCF:3682¦CATTGTA¦SOX:3721¦AACAAA¦TCF:3742¦TACAAA¦TCF:3852¦TTCAAAG¦SOX:3852¦TTCAAA¦TCF:4112¦CATTGTA¦SOX:4152¦TTCAATG¦SOX:4230¦AACAAA¦TCF:4329¦ATCAAA¦TCF:4476¦AACAAA¦TCF:4778¦AACAAA¦TCF:4871¦ATCAAA¦TCF:4907¦AACAAAG¦SOX:4907¦AACAAA¦TCF:4994¦ATCAAA¦TCF:5042¦ATCAAA¦TCF:5380¦TACAAA¦TCF:5612¦AACAAA¦TCF:5977¦ATCAAAG¦SOX:5977¦ATCAAA¦TCF:6134¦CATTGAA¦SOX:
316¦AACAAA¦TCF:638¦AACAAA¦TCF:687¦ATCAAAG¦SOX:687¦ATCAAA¦TCF:832¦ATCAAAG¦SOX:832¦ATCAAA¦TCF:972¦AACAAA¦TCF:1097¦ATCAAA¦TCF:1113¦AACAAA¦TCF:1380¦TTCAAAG¦SOX:1380¦TTCAAA¦TCF:1457¦AACAAA¦TCF:1612¦TTTGAA¦TCF:1687¦AACAAA¦TCF:1878¦AACAAA¦TCF:1992¦ATCAAAG¦SOX:1992¦ATCAAA¦TCF:2036¦CTTTGTT¦SOX:2037¦TTTGTT¦TCF:2188¦CATTGAA¦SOX:2214¦AACAAA¦TCF:2257¦AACAAA¦TCF:2535¦AACAAA¦TCF:2663¦AACAAA¦TCF:2755¦TACAAAG¦SOX:2755¦TACAAA¦TCF:2859¦AACAAA¦TCF:2907¦ATCAAA¦TCF:2931¦TACAAA¦TCF:2948¦AACAAA¦TCF:3099¦AACAAA¦TCF:3106¦AACAAA¦TCF:3114¦AACAAA¦TCF:3118¦AACAAA¦TCF:3122¦AACAAA¦TCF:3382¦AACAAA¦TCF:3478¦AACAAA¦TCF:3495¦AACAAA¦TCF:3500¦AACAAA¦TCF:3773¦ATCAAA¦TCF:3783¦TACAAA¦TCF:3849¦TTCAAA¦TCF:3944¦ATCAAAG¦SOX:3944¦ATCAAA¦TCF:4043¦TTCAATG¦SOX:4120¦AACAAA¦TCF:4257¦ATCAATG¦SOX:4435¦TACAATG¦SOX:4623¦TTTGTA¦TCF:4651¦AACAAA¦TCF:4728¦TACAAAG¦SOX:4728¦TACAAA¦TCF:4796¦AACAAA¦TCF:4883¦AACAAA¦TCF:4888¦AACAAA¦TCF:4893¦AACAAA¦TCF:4898¦AACAAA¦TCF:4908¦AACAAA¦TCF:4912¦AACAAA¦TCF:4932¦AACAAA¦TCF:4936¦AACAAA¦TCF:4941¦AACAAA¦TCF:4946¦AACAAA¦TCF:4951¦AACAAA¦TCF:4994¦ATCAAA¦TCF:5336¦AACAATG¦SOX:5557¦AACAAA¦TCF:5979¦ATCAATG¦SOX:6127¦TTTGAA¦TCF:
1146¦ATCAAA¦TCF:1188¦TACAAA¦TCF:1209¦AACAAA¦TCF:1398¦ATCAAAG¦SOX:1398¦ATCAAA¦TCF:1539¦AACAAA¦TCF:1667¦ATCAAA¦TCF:1942¦TTCAAAG¦SOX:1942¦TTCAAA¦TCF:2019¦AACAAA¦TCF:2116¦ATCAATG¦SOX:2154¦AACAAA¦TCF:2338¦ATCAAA¦TCF:2371¦ATCAAAG¦SOX:2371¦ATCAAA¦TCF:2591¦AACAAA¦TCF:2634¦AACAAA¦TCF:2722¦TTCAAA¦TCF:2788¦AACAAA¦TCF:3094¦ATCAAA¦TCF:3140¦TTCAAAG¦SOX:3140¦TTCAAA¦TCF:3244¦AACAAA¦TCF:3316¦TACAAA¦TCF:3333¦AACAAA¦TCF:3523¦TTCAAAG¦SOX:3523¦TTCAAA¦TCF:3645¦AACAAAG¦SOX:3645¦AACAAA¦TCF:3811¦ATCAATG¦SOX:3832¦AACAAA¦TCF:3994¦ATCAAAG¦SOX:3994¦ATCAAA¦TCF:4115¦AACAAA¦TCF:4136¦TACAAA¦TCF:4506¦CATTGTA¦SOX:4546¦TTCAATG¦SOX:4624¦AACAAA¦TCF:5265¦ATCAAA¦TCF:5302¦AACAAAG¦SOX:5302¦AACAAA¦TCF:5389¦ATCAAA¦TCF:5437¦ATCAAA¦TCF:5497¦CATTGTT¦SOX:6006¦AACAAA¦TCF:6371¦ATCAAA¦TCF:
Nature Neuroscience: doi:10.1038/nn.2360
Supplemental Table 3. L1 elements proximal to the transcriptional start site of
known protein-coding genes in rat genome.
A) Gene ID (GenBank accession number).
B) Gene name
C) rn3 (rat version 3)
D) chromosome
E) start coordinate of L1
F) end coordinate of L1
G-I) family of L1
J-) TCF and SOX2 sites. a|b|c separated by colons ":"
a = location in L1 of the site,
b = site motif
c = which TF (Sox or TCF/LEF)
Nature Neuroscience: doi:10.1038/nn.2360
AF115768 - rn3 chr16 75037346 75043745 L1_Rn LINE L1 712¦AACAAAG¦SOX:712¦AACAAA¦TCF:863¦TTCAAA¦TCF:875¦TTTGAT¦TCF:990¦ATCAAA¦TCF:1069¦ATCAAA¦TCF:1250¦ATCAAA¦TCF:1320¦AACAAA¦TCF:1723¦TACAAAG¦SOX:1723¦TACAAA¦TCF:1801¦AACAAA¦TCF:1806¦AACAAAG¦SOX:1806¦AACAAA¦TCF:1898¦ATCAATG¦SOX:1936¦AACAAA¦TCF:2089¦ATCAAA¦TCF:
U46149 demethyl-Q 7 rn3 chr1 176888737 176894913 L1_Rn LINE L1 466¦AACAAAG¦SOX:466¦AACAAA¦TCF:572¦AACAAA¦TCF:587¦TTCAAA¦TCF:617¦TTCAAA¦TCF:629¦TTTGAT¦TCF:762¦ATCAAA¦TCF:1022¦ATCAAA¦TCF:1092¦AACAAA¦TCF:1424¦CATTGAT¦SOX:1481¦TACAAA¦TCF:1495¦TACAAAG¦SOX:1495¦TACAAA¦TCF:1576¦AACAAA¦TCF:1581¦AACAAAG¦SOX:1581¦AACAAA¦TCF:16
AF061873 transient receptor potential cation channel, rn3 chr8 100796221 100803806 L1_Rn LINE L1 1878¦AACAAAG¦SOX:1878¦AACAAA¦TCF:1984¦AACAAA¦TCF:2029¦TTCAAA¦TCF:2041¦TTTGAT¦TCF:2174¦ATCAAA¦TCF:2434¦ATCAAA¦TCF:2504¦AACAAA¦TCF:2836¦CATTGAT¦SOX:2893¦TACAAA¦TCF:2907¦TACAAAG¦SOX:2907¦TACAAA¦TCF:2988¦AACAAA¦TCF:2993¦AACAAAG¦SOX:2993¦AACAAA¦TCF:3029¦ATCAAA
X81839 ribosomal protein S27a rn3 chr14 110591781 110598534 L1_Rat1 LINE L1 185¦AACAAA¦TCF:1028¦AACAAAG¦SOX:1028¦AACAAA¦TCF:1134¦AACAAA¦TCF:1179¦TTCAAA¦TCF:1191¦TTTGAT¦TCF:1327¦ATCAAA¦TCF:1587¦ATCAAA¦TCF:1657¦AACAAA¦TCF:2046¦TACAAA¦TCF:2060¦TACAAAG¦SOX:2060¦TACAAA¦TCF:2141¦AACAAA¦TCF:2146¦AACAAAG¦SOX:2146¦AACAAA¦TCF:2238¦ATCAATG¦
M64376 - rn3 chr7 12107904 12114350 L1_Rat1 LINE L1 742¦AACAAAG¦SOX:742¦AACAAA¦TCF:900¦TTTGAT¦TCF:1036¦ATCAAA¦TCF:1296¦ATCAAA¦TCF:1366¦AACAAA¦TCF:1756¦TACAAA¦TCF:1770¦TACAAAG¦SOX:1770¦TACAAA¦TCF:1851¦AACAAA¦TCF:1856¦AACAAAG¦SOX:1856¦AACAAA¦TCF:1948¦ATCAATG¦SOX:1986¦AACAAA¦TCF:2139¦ATCAAA¦TCF:2170¦ATCAAA¦TC
AY383659 - rn3 chr4 19864570 19870892 Lx2 LINE L1 823¦TTTGAT¦TCF:958¦ATCAAA¦TCF:1220¦ATCAAA¦TCF:1290¦AACAAA¦TCF:1679¦TACAAA¦TCF:1693¦TACAAAG¦SOX:1693¦TACAAA¦TCF:1773¦AACAAA¦TCF:1778¦AACAAAG¦SOX:1778¦AACAAA¦TCF:1870¦ATCAATG¦SOX:1908¦AACAAA¦TCF:2061¦ATCAAA¦TCF:2125¦ATCAAAG¦SOX:2125¦ATCAAA¦TCF:2387¦AACAAAG¦
AY383706 - rn3 chr6 116224479 116230762 L1_Rat1 LINE L1 529¦AACAAAG¦SOX:529¦AACAAA¦TCF:680¦TTCAAA¦TCF:894¦ATCAAA¦TCF:1224¦AACAAA¦TCF:1613¦TACAAA¦TCF:1627¦TACAAAG¦SOX:1627¦TACAAA¦TCF:1654¦AACAAA¦TCF:1708¦AACAAA¦TCF:1713¦AACAAAG¦SOX:1713¦AACAAA¦TCF:1749¦ATCAAA¦TCF:1805¦ATCAATG¦SOX:1843¦AACAAA¦TCF:1995¦ATCAAA¦TCF
AF026505 Arg/Abl-interacting protein ArgBP2 rn3 chr16 49922589 49929375 L1_Rn LINE L1 1103¦AACAAAG¦SOX:1103¦AACAAA¦TCF:1254¦TTCAAA¦TCF:1266¦TTTGAT¦TCF:1381¦ATCAAA¦TCF:1460¦ATCAAA¦TCF:1641¦ATCAAA¦TCF:1711¦AACAAA¦TCF:2100¦TACAAA¦TCF:2114¦TACAAAG¦SOX:2114¦TACAAA¦TCF:2192¦AACAAA¦TCF:2197¦AACAAAG¦SOX:2197¦AACAAA¦TCF:2289¦ATCAATG¦SOX:2327¦AACAAA
L20820 syntaxin 3 rn3 chr1 214758881 214764999 L1_Rat1 LINE L1 536¦AACAAAG¦SOX:536¦AACAAA¦TCF:655¦TACAAA¦TCF:685¦TTCAAA¦TCF:697¦TTTGAT¦TCF:878¦ATCAAA¦TCF:1138¦ATCAAA¦TCF:1208¦AACAAA¦TCF:1573¦TACAAAG¦SOX:1573¦TACAAA¦TCF:1654¦AACAAA¦TCF:1659¦AACAAAG¦SOX:1659¦AACAAA¦TCF:1751¦ATCAATG¦SOX:1789¦AACAAA¦TCF:1942¦ATCAAA¦TCF:1
AY325213 - rn3 chrX 42395193 42401412 L1_Rn LINE L1 693¦AACAAAG¦SOX:693¦AACAAA¦TCF:764¦TACAATG¦SOX:799¦AACAAA¦TCF:844¦TTCAAA¦TCF:856¦TTTGAT¦TCF:989¦ATCAAA¦TCF:1096¦TACAAA¦TCF:1249¦ATCAAA¦TCF:1319¦AACAAA¦TCF:1651¦CATTGAT¦SOX:1708¦TACAAA¦TCF:1722¦TACAAAG¦SOX:1722¦TACAAA¦TCF:1803¦AACAAA¦TCF:1808¦AACAAAG¦SOX:1
AB055759 filamin A interacting protein 1 rn3 chr8 84922895 84929319 L1_Rn LINE L1 714¦AACAAAG¦SOX:714¦AACAAA¦TCF:820¦AACAAA¦TCF:865¦TTCAAA¦TCF:877¦TTTGAT¦TCF:1010¦ATCAAA¦TCF:1270¦ATCAAA¦TCF:1340¦AACAAA¦TCF:1672¦CATTGAT¦SOX:1729¦TACAAA¦TCF:1743¦TACAAAG¦SOX:1743¦TACAAA¦TCF:1824¦AACAAA¦TCF:1829¦AACAAAG¦SOX:1829¦AACAAA¦TCF:1921¦ATCAATG¦SOX
M64380 - rn3 chr7 12133394 12139566 L1_Rat2 LINE L1 515¦AACAAAG¦SOX:515¦AACAAA¦TCF:814¦ATCAAA¦TCF:852¦AACAAAG¦SOX:852¦AACAAA¦TCF:1004¦TTCAAAG¦SOX:1004¦TTCAAA¦TCF:1075¦ATCAAA¦TCF:1145¦AACAAA¦TCF:1286¦AACAAAG¦SOX:1286¦AACAAA¦TCF:1534¦TACAAA¦TCF:1548¦TACAAAG¦SOX:1548¦TACAAA¦TCF:1629¦AACAAA¦TCF:1634¦AACAAAG¦SO
M37828 cytochrome P450, 4a10 rn3 chr5 135585975 135592357 L1_Rn2 LINE L1 240¦ATCAAA¦TCF:875¦TTTGAT¦TCF:1011¦ATCAAA¦TCF:1235¦AACAAA¦TCF:1715¦TACAAAG¦SOX:1715¦TACAAA¦TCF:1795¦AACAAA¦TCF:1800¦AACAAAG¦SOX:1800¦AACAAA¦TCF:1843¦TACAAAG¦SOX:1843¦TACAAA¦TCF:2113¦ATCAAA¦TCF:2146¦ATCAAAG¦SOX:2146¦ATCAAA¦TCF:2242¦TTCAAA¦TCF:2253¦CATTGTA¦
U36898 vomeronasal 1 receptor, a16 rn3 chr4 124065769 124071795 L1_Rn LINE L1 1066¦AACAAAG¦SOX:1066¦AACAAA¦TCF:1172¦AACAAA¦TCF:1229¦TTTGAT¦TCF:1365¦ATCAAA¦TCF:1625¦ATCAAA¦TCF:1695¦AACAAA¦TCF:2083¦TACAAA¦TCF:2097¦TACAAAG¦SOX:2097¦TACAAA¦TCF:2184¦AACAAAG¦SOX:2184¦AACAAA¦TCF:2276¦ATCAATG¦SOX:2315¦AACAAA¦TCF:2499¦ATCAAA¦TCF:2532¦ATCAAA
NM_175591 trace amine receptor 15 rn3 chr1 21939657 21946894 L1_Rat1 LINE L1 688¦AACAAAG¦SOX:688¦AACAAA¦TCF:789¦ATCAAA¦TCF:794¦AACAAA¦TCF:839¦TTCAAA¦TCF:851¦TTTGAT¦TCF:873¦TTCAAA¦TCF:1163¦ATCAAA¦TCF:1411¦TTCAATG¦SOX:1423¦ATCAAA¦TCF:1490¦TTCAAA¦TCF:1825¦CATTGAT¦SOX:1882¦TACAAA¦TCF:1896¦TACAAAG¦SOX:1896¦TACAAA¦TCF:1977¦AACAAA¦TCF:19
AF227142 taste receptor, type 2, member 10 rn3 chr4 169501659 169508015 L1_Rn LINE L1 670¦AACAAAG¦SOX:670¦AACAAA¦TCF:776¦AACAAA¦TCF:821¦TTCAAA¦TCF:833¦TTTGAT¦TCF:1204¦ATCAAA¦TCF:1274¦AACAAA¦TCF:1282¦CATTGAA¦SOX:1557¦AACAAA¦TCF:1663¦TACAAA¦TCF:1677¦TACAAAG¦SOX:1677¦TACAAA¦TCF:1758¦AACAAA¦TCF:1763¦AACAAAG¦SOX:1763¦AACAAA¦TCF:1855¦ATCAATG¦SOX
AY321331 - rn3 chr16 5722241 5728309 L1_Rat1 LINE L1 975¦AACAAAG¦SOX:975¦AACAAA¦TCF:1126¦TTCAAA¦TCF:1138¦TTTGAT¦TCF:1319¦ATCAAA¦TCF:1579¦ATCAAA¦TCF:1649¦AACAAA¦TCF:1981¦CATTGAT¦SOX:2038¦TACAAA¦TCF:2052¦TACAAAG¦SOX:2052¦TACAAA¦TCF:2133¦AACAAA¦TCF:2138¦AACAAAG¦SOX:2138¦AACAAA¦TCF:2230¦ATCAATG¦SOX:2268¦AACAAA¦
AY325145 - rn3 chr16 29138031 29144368 L1_Rn2 LINE L1 666¦TTCAAA¦TCF:678¦TTTGAT¦TCF:748¦TACAAAG¦SOX:748¦TACAAA¦TCF:996¦AACAATG¦SOX:1007¦AACAAA¦TCF:1074¦ATCAAA¦TCF:1144¦AACAAA¦TCF:1150¦ATCAAAG¦SOX:1150¦ATCAAA¦TCF:1218¦TTCAAA¦TCF:1272¦AACAAA¦TCF:1285¦AACAAAG¦SOX:1285¦AACAAA¦TCF:1533¦TACAAA¦TCF:1547¦TACAAAG¦SOX
X77815 variable coding sequence A2 rn3 chr14 21450715 21457229 L1_Rn LINE L1 814¦AACAAAG¦SOX:814¦AACAAA¦TCF:920¦AACAAA¦TCF:965¦TTCAAA¦TCF:977¦TTTGAT¦TCF:1110¦ATCAAA¦TCF:1370¦ATCAAA¦TCF:1440¦AACAAA¦TCF:1772¦CATTGAT¦SOX:1829¦TACAAA¦TCF:1843¦TACAAAG¦SOX:1843¦TACAAA¦TCF:1924¦AACAAA¦TCF:1929¦AACAAAG¦SOX:1929¦AACAAA¦TCF:2021¦ATCAATG¦SOX
U00442 opioid receptor, kappa 1 rn3 chr5 14057151 14063535 L1_Rn LINE L1 676¦AACAAAG¦SOX:676¦AACAAA¦TCF:782¦AACAAA¦TCF:827¦TTCAAA¦TCF:839¦TTTGAT¦TCF:996¦ATCAAA¦TCF:1240¦ATCAAA¦TCF:1310¦AACAAA¦TCF:1699¦TACAAA¦TCF:1713¦TACAAAG¦SOX:1713¦TACAAA¦TCF:1794¦AACAAA¦TCF:1799¦AACAAAG¦SOX:1799¦AACAAA¦TCF:1891¦ATCAATG¦SOX:1929¦AACAAA¦TCF:2
AJ132858 integral membrane transport protein UST5r rn3 chr1 211002351 211008769 L1_Rat1 LINE L1 715¦AACAAAG¦SOX:715¦AACAAA¦TCF:866¦TTCAAA¦TCF:878¦TTTGAT¦TCF:1010¦ATCAAA¦TCF:1089¦ATCAAA¦TCF:1270¦ATCAAA¦TCF:1340¦AACAAA¦TCF:1729¦TACAAA¦TCF:1743¦TACAAAG¦SOX:1743¦TACAAA¦TCF:1824¦AACAAA¦TCF:1829¦AACAAAG¦SOX:1829¦AACAAA¦TCF:1921¦ATCAATG¦SOX:1959¦AACAAA¦TCF
M29853 cytochrome P450, family 4, subfamily b, rn3 chr5 135944894 135951483 L1_Rat1 LINE L1 703¦AACAAAG¦SOX:703¦AACAAA¦TCF:809¦AACAAA¦TCF:854¦TTCAAA¦TCF:866¦TTTGAT¦TCF:999¦ATCAAA¦TCF:1259¦ATCAAA¦TCF:1329¦AACAAA¦TCF:1718¦TACAAA¦TCF:1732¦TACAAAG¦SOX:1732¦TACAAA¦TCF:1813¦AACAAA¦TCF:1818¦AACAAAG¦SOX:1818¦AACAAA¦TCF:1910¦ATCAATG¦SOX:1948¦AACAAA¦TCF:2
U83119 - rn3 chrX 32628667 32634809 L1_Rat1 LINE L1 26¦ATCAAAG¦SOX:26¦ATCAAA¦TCF:370¦AACAAAG¦SOX:370¦AACAAA¦TCF:521¦TTCAAA¦TCF:533¦TTTGAT¦TCF:734¦ATCAAA¦TCF:994¦ATCAAA¦TCF:1064¦AACAAA¦TCF:1452¦TACAAA¦TCF:1466¦TACAAAG¦SOX:1466¦TACAAA¦TCF:1551¦AACAAAG¦SOX:1551¦AACAAA¦TCF:1643¦ATCAATG¦SOX:1680¦AACAAA¦TCF:1747
D78303 splicing factor YT521-B rn3 chr14 22840853 22847355 L1_Rat2 LINE L1 713¦AACAAAG¦SOX:713¦AACAAA¦TCF:864¦TTCAAA¦TCF:876¦TTTGAT¦TCF:1078¦ATCAAA¦TCF:1157¦ATCAAA¦TCF:1338¦ATCAAA¦TCF:1408¦AACAAA¦TCF:1804¦TACAAA¦TCF:1899¦AACAAA¦TCF:1904¦AACAAAG¦SOX:1904¦AACAAA¦TCF:1996¦ATCAATG¦SOX:2034¦AACAAA¦TCF:2187¦ATCAAA¦TCF:2218¦ATCAAA¦TCF:
AF029886 - rn3 chr4 132971755 132978345 L1_Rn LINE L1 882¦AACAAAG¦SOX:882¦AACAAA¦TCF:988¦AACAAA¦TCF:1033¦TTCAAA¦TCF:1045¦TTTGAT¦TCF:1178¦ATCAAA¦TCF:1438¦ATCAAA¦TCF:1508¦AACAAA¦TCF:1839¦CATTGAT¦SOX:1896¦TACAAA¦TCF:1910¦TACAAAG¦SOX:1910¦TACAAA¦TCF:1991¦AACAAA¦TCF:1996¦AACAAAG¦SOX:1996¦AACAAA¦TCF:2088¦ATCAATG¦S
Nature Neuroscience: doi:10.1038/nn.2360
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713¦AACAAAG¦SOX:713¦AACAAA¦TCF:864¦TTCAAA¦TCF:876¦TTTGAT¦TCF:1078¦ATCAAA¦TCF:1157¦ATCAAA¦TCF:1338¦ATCAAA¦TCF:1408¦AACAAA¦TCF:1804¦TACAAA¦TCF:1899¦AACAAA¦TCF:1904¦AACAAAG¦SOX:1904¦AACAAA¦TCF:1996¦ATCAATG¦SOX:2034¦AACAAA¦TCF:2187¦ATCAAA¦TCF:2218¦ATCAAA¦TCF:2251¦ATCAAAG¦SOX:2251¦ATCAAA¦TCF:2707¦AACAATG¦SOX:2971¦ATCAAA¦TCF:3003¦AACAAA¦TCF:3121¦AACAAA¦TCF:3170¦TTCAAA¦TCF:3210¦AACAAA¦TCF:3522¦AACAAAG¦SOX:3522¦AACAAA¦TCF:3699¦AACAAA¦TCF:3983¦AACAAA¦TCF:4010¦TTTGTA¦TCF:4260¦AACAAAG¦SOX:4260¦AACAAA¦TCF:4414¦TTCAAT
882¦AACAAAG¦SOX:882¦AACAAA¦TCF:988¦AACAAA¦TCF:1033¦TTCAAA¦TCF:1045¦TTTGAT¦TCF:1178¦ATCAAA¦TCF:1438¦ATCAAA¦TCF:1508¦AACAAA¦TCF:1839¦CATTGAT¦SOX:1896¦TACAAA¦TCF:1910¦TACAAAG¦SOX:1910¦TACAAA¦TCF:1991¦AACAAA¦TCF:1996¦AACAAAG¦SOX:1996¦AACAAA¦TCF:2088¦ATCAATG¦SOX:2126¦AACAAA¦TCF:2279¦ATCAAA¦TCF:2310¦ATCAAA¦TCF:2343¦ATCAAAG¦SOX:2343¦ATCAAA¦TCF:2498¦ATCAATG¦SOX:2799¦AACAATG¦SOX:3016¦AACAAA¦TCF:3063¦ATCAAA¦TCF:3095¦AACAAA¦TCF:3213¦AACAAA¦TCF:3262¦TTCAAA¦TCF:3302¦AACAAA¦TCF:3309¦TTTGAA¦TCF:3484¦ATCAAA¦TCF:3614¦AACA
Nature Neuroscience: doi:10.1038/nn.2360
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Nature Neuroscience: doi:10.1038/nn.2360
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Nature Neuroscience: doi:10.1038/nn.2360
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Nature Neuroscience: doi:10.1038/nn.2360
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Nature Neuroscience: doi:10.1038/nn.2360
