Supplemental Figure S2. Neighbor-joining tree …...0.04 F ungia_ f ungi t e s _ - _ KJ 57367 2 3 9...
1
0.04 Fungia_fungites_-_KJ573672 3 9 9 1 9 3 J F _ - _ a l l e t s i t a l _ a r o p o r c A Montipora_flabellata_-_HQ246506 Stephanocoenia_michelinii_-_AB441313 Montipora_patula_-_HQ246496 Acropora_hyacinthus_-_FJ391988 Cladocora_arbuscula_-_AB117377 Lobophyllia_hemprichii_-_KJ573676 Porites_astreoides_-_AB441327 Montipora_foliosa_-_FJ392003 Montastraea_cavernosa_-_KJ573680 Caulastraea_furcata_-_AB117355 Acanthastrea_echinata_-_AB117327 Seriatopora_hystrix_-_KJ573695 Echinophyllia_orpheensis_-_AB117330 Pavona_cactus_-_AB441302 Oculina_diffusa_-_AB117379 Favia_fragum_-_AB117301 Porites_lutea_-_AB441328 Leptoria_phrygia_-_AB117354 Physogyra_lichtensteini_-_AB289564 Lobophyllia_corymbosa_-_AB117318 Acropora_palmata_-_AB441331 Goniopora_sp._LL-2012_-_JQ966181 Eusmilia_fastigiata_-_KJ573667 Acropora_cerealis_-_AF099652 Fungia_fungites_-_KJ573673 Montipora_flabellata_-_HQ246504 Montipora_cactus_-_AB441337 Merulina_ampliata_-_AB117368 Discosoma_sp._OK94_-_AB441354 Porites_lutea_-_AB441329 Echinopora_pacificus_-_AB117340 Coscinaraea_columna_-_AB441295 Montipora_cf._turgescens_ZF-2011_-_HQ246511 Anacropora_sp._Ishigaki-2_-_AB033177 Astreopora_myriophthalma_-_KJ573654 Alveopora_japonica_-_KJ573652 Scapophyllia_cylindrica_-_AB441283 2 9 9 1 9 3 J F _ - _ a t a c i r u m _ a r o p o r c A Ricordea_florida_-_AB441345 Montipora_aequituberculata_-_AF099659 5 8 2 1 4 4 B A _ - _ s i s n e s u k a m a _ a s s u m o r c i M Acanthastrea_rotundata_-_AB117328 Lobophyllia_hemprichii_-_AB117317 Stylophora_pistillata_-_KJ573705 Dichocoenia_stokesii_-_KJ573662 6 4 3 7 1 1 B A _ - _ s u v a f _ a i v a F Montastraea_faveolata_-_KJ573684 Stylocoeniella_guentheri_-_AB441310 Blastomussa_wellsi_-_AB289565 Montipora_grisea_-_KJ573687 Anemonia_sp._Anem_-_AB441359 Mycetophyllia_sp._99610_-_KJ573688 Plesiastrea_versipora_-_JQ966172 Euphyllia_glabrescens_-_AB441292 Astreopora_myriophthalma_-_AB441338 Anacropora_forbesi_-_AB441336 Acropora_tenuis_-_KJ573649 Seriatopora_hystrix_-_AB441319 Cyphastrea_serailia_-_JQ966171 Montipora_digitata_-_FJ392001 Cyphastrea_serailia_-_AB117334 Galaxea_fascicularis_-_AB441286 Ctenella_chagius_-_AB441293 Siderastrea_radians_-_JN600493 Goniastrea_pectinata_-_AB117350 3 8 9 1 9 3 J F _ - _ a d i l a v _ a r o p o r c A Diploastrea_heliopora_-_KJ573664 Euphyllia_ancora_-_AB441290 Montipora_capitata_-_HQ246513 Montipora_cf._incrassata_ZF-2011_-_HQ246517 Acropora_gemmifera_-_FJ391981 Montastraea_annularis_-_AB117337 Poritidae_sp._1_LL-2012_-_JQ966178 Leptoria_irregularis_-_AB117353 Galaxea_fascicularis_-_AB441287 8 7 9 1 9 3 J F _ - _ s i l i m u h _ a r o p o r c A Acropora_cervicornis_-_KJ573647 Montipora_patula_-_HQ246498 Favia_stelligera_-_KJ573670 Symphyllia_agaricia_-_AB117320 Pseudocorynactis_sp._Pseud2_-_AB441344 Acropora_humilis_-_JQ966188 Fungiacyathus_sp._2431_-_AB441340 0 8 1 3 3 0 B A _ - _ i e n o d _ a r o p o r c A Montipora_digitata_-_FJ392004 Turbinaria_irregularis_-_JQ966182 Discosoma_sp._OKDisc_-_AB441355 Porites_pukoensis_-_JQ966176 Montipora_flabellata_-_HQ246505 Montipora_cf._incrassata_ZF-2011_-_HQ246518 4 7 6 3 7 5 J K _ - _ a s o u n i s _ a i l l y h p o s I Amplexidiscus_fenestrafer_-_AB441352 Siderastrea_radians_-_AB441297 Oulophyllia_crispa_-_AB117356 Favia_stelligera_-_AB117343 Montipora_aequituberculata_-_AB033172 Montipora_aequituberculata_-_FJ391999 Euphyllia_ancora_-_AB441289 Montipora_verrilli_-_HQ246500 Madracis_decactis_-_KJ573679 Siderastrea_siderea_-_KJ573699 Acanthastrea_echinata_-_KJ573646 Montipora_digitata_-_AB033173 Platygyra_lamellina_-_AB117363 3 1 3 7 1 1 B A _ - _ s i s n e b u c _ a i m y l o c S Montipora_cf._turgescens_ZF-2011_-_HQ246510 Montipora_dilatata_-_HQ246507 Astreopora_explanata_-_AB441339 Montipora_digitata_-_FJ392000 Siderastrea_savignyana_-_AB441299 6 9 9 1 9 3 J F _ - _ s i l i b o n _ a r o p o r c A Acropora_gemmifera_-_FJ391982 Euphyllia_glabrescens_-_AB441291 Montipora_patula_-_HQ246497 Colpophyllia_natans_-_KJ573656 Goniopora_stutchburyi_-_JQ966180 Porites_astreoides_-_KJ573690 Gardineroseris_planulata_-_AB441303 Plesiastrea_versipora_-_AB289566 Acropora_palmata_-_AF099655 Montastraea_franksi_-_AB117338 Euphyllia_divisa_-_AB441288 5 7 6 3 7 5 J K _ - _ a s o u n i s _ a i l l y h p o s I Colpophyllia_natans_-_KJ573655 Favia_pallida_-_AB117344 Acropora_cervicornis_-_AF099654 Acropora_millepora_-_AF099653 Montipora_dilatata_-_HQ246508 2 3 3 7 1 1 B A _ - _ a r e c a l _ a r o p y x O Acropora_latistella_-_AF099656 Montipora_capitata_-_HQ246514 Acropora_samoensis_-_FJ391994 Acropora_millepora_-_EZ011588 Oulastrea_crispata_-_AB441282 Hydnophora_grandis_-_AB117371 Diploria_strigosa_-_KJ573666 Discosoma_nummiforme_-_AB441351 Favites_pentagona_-_JQ966164 Favia_fragum_-_AB117300 Agaricia_humilis_-_AB441304 Montastraea_faveolata_-_AB117339 9 8 9 1 9 3 J F _ - _ a r e t s u a _ a r o p o r c A Platygyra_sp._1_LL-2012_-_JQ966166 3 3 3 1 4 4 B A _ - _ a r e f i l a p _ a r o p o s I Corynactis_californica_-_AB441342 Cyphastrea_serailia_-_AB117335 Mycetophyllia_sp._9968_-_KJ573689 Pocillopora_verrucosa_-_AB441315 3 8 6 3 7 5 J K _ - _ a t r u c _ a e r t s a m y h P Isopora_togianensis_-_AB441334 Montipora_digitata_-_JN202445 Dichocoenia_stokesii_-_KJ573661 Galaxea_fascicularis_-_JQ966165 Tubastraea_aurea_-_AB441322 Discosoma_carlgreni_-_AB441353 Phymastrea_valenciennesi_-_AB117361 Mussismilia_braziliensis_-_AB117309 Rhodactis_indosinensis_-_AB441349 0 5 6 9 9 0 F A _ - _ a r e f i t i g i d _ a r o p o r c A 7 9 9 1 9 3 J F _ - _ a s o b m y r o c _ a r o p o r c A Porites_lutea_-_JQ966174 Alveopora_sp._KENAlv_-_AB441330 Acropora_gemmifera_-_AB033183 Echinopora_lamellosa_-_JQ966169 Alveopora_japonica_-_KJ573651 Astreopora_myriophthalma_-_FJ392006 Montipora_cf._incrassata_ZF-2011_-_HQ246519 Cynarina_lacrymalis_-_AB117323 Pseudosiderastrea_tayami_-_JN600488 9 7 2 1 4 4 B A _ - _ a s o i c e p s _ a i v a F Favites_halicora_-_AB117348 Dichocoenia_stokesi_-_AB117383 Madracis_decactis_-_KJ573678 Helioseris_cucullata_-_AB441305 8 5 6 9 9 0 F A _ - _ a d i l a v _ a r o p o r c A Sandalolitha_robusta_-_KJ573692 Acanthastrea_echinata_-_KJ573645 Pachyseris_speciosa_-_AB441307 Astreopora_sp._LL-2012_-_JQ966190 Siderastrea_siderea_-_JN600495 Symphyllia_recta_-_AB117321 Helioseris_cucullata_-_AB441306 5 6 3 7 1 1 B A _ - _ a i n o e a p _ a i n i t c e P Ricordea_yuma_-_AB441346 Diploastrea_heliopora_-_AB117375 Pavona_cactus_-_AB441301 Stephanocoenia_michelinii_-_AB441314 Diploria_labyrinthiformis_-_AB117302 Hydnophora_exesa_-_AB117370 Pseudosiderastrea_tayami_-_JN600486 Parascolymia_vitiensis_-_AB117324 Acropora_gemmifera_-_FJ391980 Siderastrea_siderea_-_JN600496 Diploria_strigosa_-_KJ573665 Montipora_dilatata_-_HQ246509 Meandrina_meandrites_-_AB117381 Scolymia_sp._PL1_-_AB117325 Montastraea_cavernosa_-_AB117374 Tubastraea_aurea_-_AB441320 Acropora_humilis_-_EF363315 Diploria_clivosa_-_AB117304 Isopora_palifera_-_AB033179 Acropora_florida_-_AB033182 Siderastrea_siderea_-_KJ573698 Cirripathes_sp._TW23_-_AB441356 4 4 4 2 0 2 N J _ - _ a d i l l a p _ a i v a F Acropora_cervicornis_-_KJ573648 Platygyra_daedalea_-_AB117362 Echinophyllia_echinoporoides_-_AB117331 Solenastrea_bournoni_-_KJ573701 Porites_astreoides_-_KJ573691 Montipora_efflorescens_-_AB033174 Pseudosiderastrea_formosa_-_JN600483 4 8 2 1 4 4 B A _ - _ e a l l i h _ a e r t s a h t n a c A Montipora_patula_-_HQ246499 Diploria_strigosa_-_AB117303 Phymastrea_curta_-_KJ573682 Stephanocoenia_intersepta_-_KJ573703 Stichodactyla_sp._BZStic_-_AB441360 8 5 3 1 4 4 B A _ - _ 4 2 W T _ . p s _ s e h t a p i r r i C Siderastrea_savignyana_-_JN600492 Eusmilia_fastigiata_-_AB117380 Corynactis_californica_-_AB441341 Echinopora_gemmacea_-_AB117342 8 6 1 6 6 9 Q J _ - _ a n a m u t o r _ a i v a F Turbinaria_peltata_-_JQ966183 Siderastrea_stellata_-_JN600497 Siderastrea_stellata_-_JN600498 Favia_fragum_-_KJ573669 Goniopora_sp._OK54_-_AB441326 Acanthastrea_echinata_-_AB117326 Stephanocoenia_intersepta_-_KJ573702 Solenastrea_bournoni_-_KJ573700 Favites_halicora_-_AB117347 Pseudosiderastrea_tayami_-_JN600487 Pavona_decussata_-_JQ966189 Lobophyllia_hemprichii_-_KJ573677 Seriatopora_sp._OK17_-_AB441318 0 6 6 3 7 5 J K _ - _ s u r d n i l y c _ a r y g o r d n e D Montastraea_cavernosa_-_AB117373 3 3 3 7 1 1 B A _ - _ a r e c a l _ a r o p y x O Mussismilia_hispida_-_AB117310 Manicina_areolata_-_AB117305 Porites_lutea_-_JQ966177 Anacropora_sp._Ishigaki-1_-_AB033176 Siderastrea_glynni_-_JN600490 Poritidae_sp._2_LL-2012_-_JQ966179 Siderastrea_stellata_-_AB441298 4 1 3 7 1 1 B A _ - _ s i s n e b u c _ a i m y l o c S Montipora_capitata_-_HQ246515 Leptastrea_pruinosa_-_AB441281 Ricordea_yuma_-_AB441347 Rhodactis_mussoides_-_AB441348 Isophyllia_sinuosa_-_AB117315 Dendrogyra_cylindrus_-_AB117384 Isopora_togianensis_-_AF310137 Cyphastrea_chalcidicum_-_AB117336 Cladocora_arbuscula_-_AB117378 Acropora_digitifera_-_AB033184 8 7 2 1 4 4 B A _ - _ m u r o c i m a _ a i o t t a b a r a B Acropora_tenuis_-_AB033181 Lobactis_scutaria_-_AB441309 Montipora_grisea_-_KJ573686 Goniastrea_aspera_-_AB117351 4 8 9 1 9 3 J F _ - _ a r o p e l l i m _ a r o p o r c A Montastraea_faveolata_-_KJ573685 Astreopora_myriophthalma_-_AB033171 Diploastrea_heliopora_-_KJ573663 Phymastrea_magnistellata_-_AB117360 2 1 3 7 1 1 B A _ - _ e a i c i l a _ a i l l y h p o t e c y M Porites_compressa_-_JQ966175 Montipora_verrilli_-_HQ246501 Psammocora_contigua_-_AB441294 Sandalolitha_robusta_-_KJ573693 Herpolitha_limax_-_AB441308 Tubastraea_sp._OKTub_-_AB441323 Galaxea_astreata_-_JQ966184 9 7 9 1 9 3 J F _ - _ s i l i m u h _ a r o p o r c A Symphyllia_radians_-_AB117322 Montipora_hispida_-_FJ392005 Galaxea_fascicularis_-_JQ966186 Sphenopus_marsupialis_-_AB441362 6 6 3 7 1 1 B A _ - _ s u t o t n a h p e l e _ m u i d e c y M Lobophyllia_pachysepta_-_AB117319 Meandrina_braziliensis_-_AB117382 Echinophyllia_aspera_-_AB117329 Siderastrea_savignyana_-_JN600491 Oulophyllia_crispa_-_AB117357 Acropora_tenuis_-_KJ573650 Coscinaraea_monile_-_KJ573657 Pseudosiderastrea_formosa_-_JN600485 Faviidae_sp._LL-2012_-_JQ966162 Solenastrea_bournoni_-_AB117376 Acropora_microphthalma_-_FJ391986 Phymastrea_curta_-_AB117359 Acropora_formosa_-_AF099651 6 1 3 7 1 1 B A _ - _ a s o l u g n a _ a s s u M Siderastrea_radians_-_KJ573696 Siderastrea_radians_-_JN600494 Siderastrea_siderea_-_AB441296 Siderastrea_savignyana_-_AB441300 Madracis_myriaster_-_AB441312 Favia_fragum_-_KJ573668 Siderastrea_radians_-_KJ573697 Mycetophyllia_daniana_-_AB117311 Isopora_palifera_-_FJ391998 9 5 6 3 7 5 J K _ - _ s u r d n i l y c _ a r y g o r d n e D Anacropora_matthai_-_AB441335 Montipora_cf._turgescens_ZF-2011_-_HQ246512 Astreopora_myriophthalma_-_KJ573653 Dendrophyllia_sp._OK31-32_-_AB441324 Seriatopora_sp._OK16_-_AB441317 8 7 1 3 3 0 B A _ - _ i n n a m e g g e u r b _ a r o p o s I Acropora_formosa_-_JN202443 Zoanthus_sp._BZgre_-_AB441361 Oulophyllia_bennettae_-_AB117358 0 9 9 1 9 3 J F _ - _ s i l a e r e c _ a r o p o r c A Acropora_tenuis_-_FJ391991 3 6 1 6 6 9 Q J _ - _ a s e x e _ a r o h p o n d y H Acropora_nasuta_-_AB033185 7 6 3 7 1 1 B A _ - _ s u t o t n a h p e l e _ m u i d e c y M Favia_leptophylla_-_AB117307 Echinopora_pacificus_-_AB117341 6 0 3 7 1 1 B A _ - _ s n a t a n _ a i l l y h p o p l o C Favia_stelligera_-_KJ573671 Favites_chinensis_-_AB117349 Acropora_humilis_-_EF363316 Coscinaraea_monile_-_KJ573658 5 9 9 1 9 3 J F _ - _ a e r e h t y c _ a r o p o r c A Seriatopora_hystrix_-_KJ573694 2 3 3 1 4 4 B A _ - _ i n n a m e g g e u r b _ a r o p o s I 5 4 3 7 1 1 B A _ - _ a d i l l a p _ a i v a F Madracis_myriaster_-_AB441311 Tubastraea_aurea_-_AB441321 5 8 9 1 9 3 J F _ - _ a t a n i h c e _ a r o p o r c A Siderastrea_savignyana_-_JN600489 Leptoria_irregularis_-_AB117352 4 6 3 7 1 1 B A _ - _ s i n r o c i c l a _ a i n i t c e P Montipora_digitata_-_FJ392002 Montipora_verrilli_-_HQ246502 Pseudocorynactis_sp._Pseud1_-_AB441343 Montipora_altasepta_-_AB033175 Mussismilia_harttii_-_AB117308 Acropora_aspera_-_FJ391987 Goniastrea_deformis_-_AB441280 Stylophora_pistillata_-_KJ573704 Merulina_scabricula_-_AB117369 Porites_lutea_-_JQ966173 Pseudosiderastrea_formosa_-_JN600484 Montipora_verrilli_-_HQ246503 7 6 1 6 6 9 Q J _ - _ a e l a d e a d _ a r y g y t a l P Montastraea_cavernosa_-_KJ573681 Stylophora_pistillata_-_AB441316 2 7 3 7 1 1 B A _ - _ i y o r f f o e g _ a i l l y h p y h c a r T Rhodactis_sp._OKRhod_-_AB441350 7 5 3 1 4 4 B A _ - _ 2 2 W T _ . p s _ s e h t a p i r r i C Montipora_capitata_-_HQ246516 Cyphastrea_serailia_-_JQ966170 Turbinaria_peltata_-_AB441325 Supplemental Figure S2. Neighbor-joining tree generated using Geneious R7 and the aligned CYB sequence data for corals provided in Supplement S1. Bootstrap support is not shown, but is typically low for most internal nodes (available from JPW). Tree is midpoint-rooted, with no outgroup taxon identified; circular format is provided so all taxon names are visible.
Transcript of Supplemental Figure S2. Neighbor-joining tree …...0.04 F ungia_ f ungi t e s _ - _ KJ 57367 2 3 9...
0.04
Fungia_fungites_-_KJ573672
399193JF_-_alletsital_aroporcA
Montipora_fla
bellata_-_HQ246506
Stephanocoenia_michelinii_-_AB441313
Montipora_patula_-_HQ246496
Acro
pora
_hya
cint
hus_
-_FJ
3919
88Cladocora_arbuscula_-_AB117377
Lobo
phyll
ia_he
mprich
ii_-_
KJ573
676
Porites_astreoides_-_AB441327
Montip
ora_
folio
sa_-
_FJ3
9200
3
Montastraea_cavernosa_-_KJ573680
Caulastraea_furcata_-_AB117355
Acant
hastr
ea_e
china
ta_-
_AB11
7327
Seriatopora_hystrix_-_KJ573695
Echinophyllia_orpheensis_-_AB117330
Pavona_cactus_-_AB441302
Oculina_diffusa_-_AB117379
Favia
_fra
gum
_-_A
B117
301
Porites_lutea_-_AB441328
Leptoria_phrygia_-_AB117354
Physogyra_lichtensteini_-_AB289564
Lobo
phyll
ia_co
rymbo
sa_-
_AB11
7318
Acro
pora
_pal
mat
a_-_
AB44
1331
Goniopora_sp._LL-2012_-_JQ966181
Eusmilia_fastigiata_-_KJ573667
Acropora_cerealis_-_AF099652
Fungia_fungites_-_KJ573673
Montipora_fla
bellata_-_HQ246504
Mon
tipor
a_ca
ctus
_-_A
B441
337
Merulina_ampliata_-_AB117368
Discosoma_sp._OK94_-_AB441354
Porites_lutea_-_AB441329
Echinopora_pacificus_-_AB117340
Coscinaraea_columna_-_AB441295
Montipora_cf.
_turgescens_
ZF-2011_-_HQ246511
Anac
ropo
ra_s
p._I
shig
aki-2
_-_A
B033
177
Astreopora_myriophthalm
a_-_KJ573654
Alveopora_japonica_-_KJ573652
Scapophyllia_cylindrica_-_AB441283
299193JF_-_atacirum_aroporcA
Ricordea_florida_-_AB441345
Mon
tipor
a_ae
quitu
berc
ulat
a_-_
AF09
9659
582144BA_-_sisnesukama_assu
morciM
Acan
thas
trea_
rotu
ndat
a_-_
AB11
7328
Lobophyllia_hempric
hii_-_AB117317
Stylophora_pistillata_-_KJ573705
Dichocoenia_stokesii_-_KJ573662
643711BA_-_suvaf_aivaF
Montastraea_faveolata_-_KJ573684
Stylocoeniella_guentheri_-_AB441310
Blastomussa_wellsi_-_AB289565
Mon
tipor
a_gr
isea
_-_K
J573
687
Anemonia_sp._Anem_-_AB441359
Myc
etop
hylli
a_sp
._99
610_
-_KJ
5736
88
Plesiastrea_versipora_-_JQ966172
Euphyllia_glabrescens_-_AB441292
Astreopora_myriophthalm
a_-_AB441338
Anac
ropo
ra_f
orbe
si_-
_AB4
4133
6
Acropora_tenuis_-_KJ573649
Seriatopora_hystrix_-_AB441319
Cyphastrea_serailia_-_JQ966171
Montip
ora_
digita
ta_-
_FJ3
9200
1
Cyphastrea_serailia_-_AB117334
Galaxea_fascicularis_-_AB441286
Ctenella_chagius_-_AB441293
Siderastrea_radians_-_JN600493
Goniastrea_pectinata_-_AB117350
389193JF_-_adilav_aroporcA
Diploastrea_heliopora_-_KJ573664
Euphyllia_ancora_-_AB441290
Montipora_capitata_-_HQ246513
Montipora_cf._incrassata_ZF-2011_-_HQ246517
Acro
pora
_gem
mife
ra_-
_FJ3
9198
1
Montastraea_annularis_-_AB117337
Poritidae_sp._1_LL-2012_-_JQ966178
Leptoria_irregularis_-_AB117353
Galaxea_fascicularis_-_AB441287
8791
93JF
_-_s
ilimu
h_ar
opor
cA
Acropora_cervicornis_-_KJ573647
Montipora_patula_-_HQ246498
Favia_stelligera_-_KJ573670
Symph
yllia_
agari
cia_-_
AB1173
20
Pseudocorynactis_sp._Pseud2_-_AB441344
Acro
pora
_hum
ilis_
-_JQ
9661
88
Fungiacyathus_sp._2431_-_AB441340
081330BA_-_ienod_aroporcA
Montip
ora_
digita
ta_-_
FJ392
004
Turbinaria_irregularis_-_JQ966182
Discosoma_sp._OKDisc_-_AB441355
Porites_pukoensis_-_JQ966176
Montipora_fla
bellata_-_HQ246505
Montipora_cf._incrassata_ZF-2011_-_HQ246518
476375JK_-_asounis_aillyhposI
Amplexidiscus_fenestrafer_-_AB441352
Siderastrea_radians_-_AB441297
Oulophyllia_crispa_-_AB117356
Favia_stelligera_-_AB117343
Mon
tipor
a_ae
quitu
berc
ulat
a_-_
AB03
3172
Mon
tipor
a_ae
quitu
berc
ulata
_-_F
J391
999
Euphyllia_ancora_-_AB441289
Montipora_verrilli_-_HQ246500
Madracis_decactis_-_KJ573679
Siderastrea_siderea_-_KJ573699
Acan
thas
trea_
echin
ata_
-_KJ
5736
46
Mon
tipor
a_di
gita
ta_-
_AB0
3317
3
Platygyra_lamellina_-_AB117363
313711BA_-_sisnebuc_aimylocS
Montip
ora_c
f._tur
gesc
ens_
ZF-2011
_-_HQ24
6510
Montipora_dila
tata_-_HQ246507
Astreopora_explanata_-_AB441339Mon
tipor
a_dig
itata
_-_F
J392
000
Siderastrea_savignyana_-_AB441299
699193JF_-_silibon_aroporcAAcro
pora
_gem
mife
ra_-
_FJ3
9198
2
Euphyllia_glabrescens_-_AB441291
Montipora_patula_-_HQ246497
Col
poph
yllia
_nat
ans_
-_KJ
5736
56
Goniopora_stutchburyi_-_JQ966180
Porites_astreoides_-_KJ573690
Gardineroseris_planulata_-_AB441303
Plesiastrea_versipora_-_AB289566
Acro
pora
_pal
mat
a_-_
AF09
9655
Montastraea_franksi_-_AB117338
Euphyllia_divisa_-_AB441288
576375JK_-_asounis_aillyhposI Colp
ophy
llia_
nata
ns_-
_KJ5
7365
5
Favia_pallida_-_AB117344
Acro
pora
_cer
vico
rnis
_-_A
F099
654 Acropora_m
illepora_-_AF099653
Montipora_dila
tata_-_HQ246508
233711BA_-_arecal_aropyxO
Acropora_latistella_-_AF099656
Montipora_capitata_-_HQ246514
Acro
pora
_sam
oens
is_-
_FJ3
9199
4
Acropora_millepora_-_EZ011588
Oulastrea_crispata_-_AB441282
Hydnophora_grandis_-_AB117371
Dipl
oria
_stri
gosa
_-_K
J573
666
Discosoma_nummiforme_-_AB441351
Favites_pentagona_-_JQ966164
Favia
_fra
gum
_-_A
B117
300
Agaricia_humilis_-_AB441304
Montastraea_faveolata_-_AB117339
9891
93JF
_-_a
rets
ua_a
ropo
rcA
Platygyra_sp._1_LL-2012_-_JQ966166
3331
44BA
_-_a
refil
ap_a
ropo
sI
Corynactis_californica_-_AB441342
Cyphastrea_serailia_-_AB117335
Myc
etop
hylli
a_sp
._99
68_-
_KJ5
7368
9
Pocillopora_verrucosa_-_AB441315
386375JK_-_atruc_aertsamyhP
Isopora_togianensis_-_AB441334
Mon
tipor
a_di
gita
ta_-
_JN2
0244
5
Dichocoenia_stokesii_-_KJ573661
Galaxea_fascicularis_-_JQ
966165
Tubastraea_aurea_-_AB441322
Discosoma_carlgreni_-_AB441353
Phymastrea_valenciennesi_-_AB117361
Mus
sism
ilia_
braz
ilien
sis_
-_AB
1173
09
Rhodactis_indosinensis_-_AB441349
0569
90FA
_-_a
refit
igid
_aro
porc
A
7991
93JF
_-_a
sob
myro
c_ar
opor
cA
Porites_lutea_-_JQ966174
Alveopora_sp._KENAlv_-_AB441330
Acropora_gemm
ifera_-_AB033183
Echinopora_lamellosa_-_JQ966169
Alveopora_japonica_-_KJ573651
Astreopora_myriophthalm
a_-_FJ392006
Montipora_cf._incrassata_ZF-2011_-_HQ246519
Cynar
ina_la
crym
alis_
-_AB11
7323
Pseudosiderastrea_tayami_-_JN600488
9721
44BA
_-_a
soic
eps_
aiva
F
Favites_halicora_-_AB117348
Dichocoenia_stokesi_-_AB117383
Madracis_decactis_-_KJ573678
Helioseris_cucullata_-_AB441305
8569
90FA
_-_a
dilav
_aro
porc
A
Sandalolitha_robusta_-_KJ573692
Acan
thas
trea_
echin
ata_
-_KJ
5736
45
Pachyseris_speciosa_-_AB441307
Astreopora_sp._LL-2012_-_JQ966190
Siderastrea_siderea_-_JN600495Sym
phyll
ia_rec
ta_-_A
B1173
21
Helioseris_cucullata_-_AB441306
5637
11BA
_-_a
inoe
ap_a
init
ceP
Ricordea_yuma_-_AB441346
Diploastrea_heliopora_-_AB117375
Pavona_cactus_-_AB441301
Stephanocoenia_michelinii_-_AB441314
Dipl
oria
_lab
yrin
thifo
rmis_
-_AB
1173
02
Hydnophora_exesa_-_AB117370
Pseudosiderastrea_tayami_-_JN600486
Paras
colym
ia_vit
iensis
_-_A
B1173
24
Acro
pora
_gem
mife
ra_-
_FJ3
9198
0
Siderastrea_siderea_-_JN600496
Dipl
oria
_stri
gosa
_-_K
J573
665
Montipora_dilatata_-_HQ246509
Meandrina_meandrites_-_AB117381
Scolym
ia_sp._PL1_-_AB117325
Montastraea_cavernosa_-_AB117374
Tubastraea_aurea_-_AB441320
Acropora_humilis_-_EF363315
Dipl
oria
_cliv
osa_
-_AB
1173
04
Isopora_palifera_-_AB033179
Acropora_florida_-_AB033182
Siderastrea_siderea_-_KJ573698
Cirripathes_sp._TW23_-_AB441356
444202NJ_-_adillap_aivaF
Acropora_cervicornis_-_KJ573648
Platygyra_daedalea_-_AB117362
Echinophyllia_echinoporoides_-_AB117331
Solenastrea_bournoni_-_KJ573701
Porites_astreoides_-_KJ573691
Mon
tipor
a_ef
flore
scen
s_-_
AB03
3174
Pseudosiderastrea_formosa_-_JN600483
482144BA_-_eallih_aertsahtnacA
Montipora_patula_-_HQ246499
Dipl
oria
_stri
gosa
_-_A
B117
303
Phymastrea_curta_-_KJ573682
Stephanocoenia_intersepta_-_KJ573703
Stichodactyla_sp._BZStic_-_AB441360853144BA_-_42WT_.ps_sehtapirriC
Siderastrea_savignyana_-_JN600492
Eusmilia_fastigiata_-_AB117380
Corynactis_californica_-_AB441341
Echinopora_gemm
acea_-_AB117342
8616
69QJ
_-_a
namu
tor_
aiva
F
Turbinaria_peltata_-_JQ966183
Siderastrea_stellata_-_JN600497Siderastrea_stellata_-_JN600498
Favia
_fra
gum
_-_K
J573
669
Goniopora_sp._OK54_-_AB441326
Acan
thas
trea_
echin
ata_
-_AB
1173
26
Stephanocoenia_intersepta_-_KJ573702
Solenastrea_bournoni_-_KJ573700
Favites_halicora_-_AB117347
Pseudosiderastrea_tayami_-_JN600487
Pavona_decussata_-_JQ966189
Lobo
phyll
ia_he
mprich
ii_-_
KJ573
677
Seriatopora_sp._OK17_-_AB441318
066375JK_-_surdnilyc_arygordneD
Montastraea_cavernosa_-_AB117373
333711BA_-_arecal_aropyxO
Mus
sism
ilia_
hisp
ida_
-_AB
1173
10
Man
icin
a_ar
eola
ta_-
_AB1
1730
5
Porites_lutea_-_JQ966177
Anac
ropo
ra_s
p._I
shig
aki-1
_-_A
B033
176
Siderastrea_glynni_-_JN600490
Poritidae_sp._2_LL-2012_-_JQ966179
Siderastrea_stellata_-_AB441298
413711BA_-_sisnebuc_aimylocS
Montip
ora_
capit
ata_-
_HQ24
6515
Leptastrea_pruinosa_-_AB441281
Ricordea_yuma_-_AB441347
Rhodactis_mussoides_-_AB441348
Isop
hylli
a_si
nuos
a_-_
AB11
7315
Dendrogyra_cylindrus_-_AB117384
Isopora_togianensis_-_AF310137
Cyphastrea_chalcidicum_-_AB117336
Cladocora_arbuscula_-_AB117378
Acropora_digitifera_-_AB033184
8721
44BA
_-_
muro
cima
_aio
ttab
araB
Acro
pora
_ten
uis_
-_AB
0331
81
Lobactis_scutaria_-_AB441309
Mon
tipor
a_gr
isea
_-_K
J573
686
Goniastrea_aspera_-_AB117351
489193JF_-_aropellim_aroporcA
Montastraea_faveolata_-_KJ573685
Astreopora_myriophthalm
a_-_AB033171
Diploastrea_heliopora_-_KJ573663
Phymastrea_m
agnistellata_-_AB117360
213711BA_-_eaicila_aillyhpotecyM
Porites_compressa_-_JQ966175
Montipora_verrilli_-_HQ246501
Psammocora_contigua_-_AB441294Sandalolitha_robusta_-_KJ573693
Herpolitha_limax_-_AB441308
Tubastraea_sp._OKTub_-_AB441323
Galaxea_astreata_-_JQ966184
9791
93JF
_-_s
ilimu
h_ar
opor
cA
Symph
yllia_
radian
s_-_A
B1173
22
Montip
ora_
hispid
a_-_
FJ39
2005
Galaxea_fascicularis_-_JQ966186
Sphenopus_marsupialis_-_AB441362
6637
11BA
_-_s
utot
nahp
ele_
muid
ecy
M
Lobophyllia_pach
ysepta_-_AB117319
Meandrina_braziliensis_-_AB117382
Echinophyllia_aspera_-_AB117329
Siderastrea_savignyana_-_JN600491
Oulophyllia_crispa_-_AB117357
Acropora_tenuis_-_KJ573650
Coscinaraea_monile_-_KJ573657
Pseudosiderastrea_formosa_-_JN600485
Faviidae_sp._LL-2012_-_JQ966162
Solenastrea_bournoni_-_AB117376
Acro
pora
_mic
roph
thal
ma_
-_FJ
3919
86
Phymastrea_curta
_-_AB117359
Acropora_formosa_-_AF099651
613711BA_-_asolugna_assuM
Siderastrea_radians_-_KJ573696Siderastrea_radians_-_JN600494
Siderastrea_siderea_-_AB441296
Siderastrea_savignyana_-_AB441300
Madracis_myriaster_-_AB441312
Favia
_fra
gum
_-_K
J573
668
Siderastrea_radians_-_KJ573697
Myc
etop
hylli
a_da
nian
a_-_
AB11
7311
Isopora_palifera_-_FJ391998
956375JK_-_surdnilyc_arygordneD
Anac
ropo
ra_m
atth
ai_-
_AB4
4133
5
Montipora_cf.
_turgescens_
ZF-2011_-_HQ246512
Astreopora_myriophthalm
a_-_KJ573653
Dendrophyllia_sp._OK31-32_-_AB441324
Seriatopora_sp._OK16_-_AB441317
8713
30BA
_-_i
nna
megg
eurb
_aro
posI
Acropora_formosa_-_JN
202443
Zoanthus_sp._BZgre_-_AB441361
Oulophyllia_bennettae_-_AB117358
099193JF_-_silaerec_aroporcA
Acro
pora
_ten
uis_
-_FJ
3919
91
361669QJ_-_as
exe_arohpondy
H
Acropora_nasuta_-_AB033185
7637
11BA
_-_s
utot
nahp
ele_
muid
ecy
M
Favi
a_le
ptop
hylla
_-_A
B117
307
Echinopora_pacificus_-_AB117341
603711BA_-_snatan_aillyhpoploC
Favia_stelligera_-_KJ573671
Favites_chinensis_-_AB117349
Acropora_humilis_-_EF363316
Coscinaraea_monile_-_KJ573658
5991
93JF
_-_a
ereh
tyc_
arop
orcA
Seriatopora_hystrix_-_KJ573694
2331
44BA
_-_i
nna
megg
eurb
_aro
posI
5437
11BA
_-_a
dilla
p_ai
vaF
Madracis_myriaster_-_AB441311
Tubastraea_aurea_-_AB441321
589193JF_-_atanihce_aroporcA
Siderastrea_savignyana_-_JN600489
Leptoria_irregularis_-_AB117352
4637
11BA
_-_s
inro
cicl
a_ai
nitce
P
Montip
ora_
digita
ta_-
_FJ3
9200
2
Montipora_verrilli_-_HQ246502
Pseudocorynactis_sp._Pseud1_-_AB441343
Mon
tipor
a_al
tase
pta_
-_AB
0331
75
Mus
sism
ilia_
hartt
ii_-_
AB11
7308
Acro
pora
_asp
era_
-_FJ
3919
87
Goniastrea_deformis_-_AB441280
Stylophora_pistillata_-_KJ573704
Merulina_scabricula_-_AB117369
Porites_lutea_-_JQ966173
Pseudosiderastrea_formosa_-_JN600484
Montipora_verrilli_-_HQ246503
7616
69QJ
_-_a
elad
ead_
aryg
ytal
P
Montastraea_cavernosa_-_KJ573681
Stylophora_pistillata_-_AB441316
2737
11BA
_-_i
yorff
oeg_
ailly
hpyh
carT
Rhodactis_sp._OKRhod_-_AB441350
753144BA_-_22WT_.ps_sehtapirriC
Montip
ora_
capit
ata_-
_HQ24
6516
Cyphastrea_serailia_-_JQ966170
Turbinaria_peltata_-_AB441325
Supplemental Figure S2. Neighbor-joining tree generated using Geneious R7 and the aligned CYB sequence data for corals provided in Supplement S1. Bootstrap support is not shown, but is typically low for most internal nodes (available from JPW). Tree is midpoint-rooted, with no outgroup taxon identi�ed; circular format is provided so all taxon names are visible.
