Study of N -alkylation of indoles from the reaction of 2 ...

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Study of N 1 -alkylation of indoles from the reaction of 2(or 3)- aminoindole-3-(or 2)carbonitriles with DMF-dialkylacetals.† Yvonnick Loidreau, a,b Sigismund Melissen, b Vincent Levacher, b,c Cédric Logé, d Jérôme Graton, e Jean- Yves Le Questel, e* Thierry Besson a,b* a Université de Rouen, U.F.R. Médecine – Pharmacie, 22 boulevard Gambetta, 76183 Rouen Cedex 1, France. Fax: +33(0) 235592965; Tel: +33(0)235592904 or +33(0)235148399; E-mail: [email protected] b CNRS, Laboratoire C.O.B.R.A., UMR 6014 & FR3038, Institut de Recherche en Chimie Organique Fine (I.R.C.O.F.) rue Tesnière, 76130 Mont Saint-Aignan, France c INSA de Rouen, Avenue de l’Université, 76801 Saint-Étienne-du-Rouvray Cedex, France d Université de Nantes, Nantes Atlantique Universités, laboratorie de Chimie thérapeutique, Cibles et Médicaments des Infections, de l’Immunité et du cancer, IICiMed UPRES EA 1155, U.F.R. Sciences Pharmaceutiques et Biologiques, 1 rue Gaston Veil, 44035 Nantes, France e Université de Nantes, Chimie et Interdisciplinarité: Synthèse, Analyse, Modélisation (CEISAM), UMR CNRS 6230, 2 rue de la Houssinière – BP 92208, 44322 Nantes Cedex 3, France. Fax: +33(0)251125712; Tel: +33(0)251125563; E-mail: [email protected] Supporting Information General Information All reactions were monitored by thin-layer chromatography with silica gel 60 F254 pre- coated aluminium plates (0,25mm). Melting points of solid compounds were measured on an Electrothermal IA 9000 melting point apparatus (compounds 3 and 4) or a STUART apparatus advanced SMP3 with a precision of ±0.5°C (compounds 1, 2, 5-9) and are uncorrected. IR spectra were recorded on a PerkinElmer Spectrum 100 Series FT-IR spectrometer. Liquids and solids were applied on the Single Reflection Attenuated Total Reflectance (ATR) Accessories. Absorption bands are given in cm -1 . 1 H, 13 C and 19 F NMR spectra were recorded on an AVANCE 400 MHz spectrometer (compounds 3 and 4) or on a Bruker DXP 300 spectrometer at 300, 75 and 282 MHz respectively (compounds 1, 2, 5-9). Abbreviations used for peak multiplicities are s: singlet, d: doublet, t: triplet, q: quadruplet, m: multiplet and br (broad). Coupling constants J are given in Hertz (Hz) and chemical shifts are given in parts per million (δ) and calibrated with DMSO-d 6 or D 2 O (residual solvent signals). Mass spectra analysis was performed by the Mass Spectrometry Laboratory of the University of Rouen. Mass spectra (EI) were recorded with a Waters ZQ 2000 and a Waters LCP 1 er XR spectrometers. Microwave experiments were conducted in two commercial microwave reactors especially designed for synthetic chemistry. Start SYNTH TM (Milestone S.r.l. Italy) is a multi-mode cavity with a microwave power delivery system ranging from 0 to 1200 W. Open vessel experiments were carried out in a 250 mL round bottom flask fitted with a reflux condenser. The temperature was monitored via a fibre-optic contact thermometer protected in a Teflon coated ceramic well inserted directly in the reaction mixture or via contact-less infrared pyrometer. The vessel contents were stirred by means of an adjustable rotating magnetic plate located below the floor of the microwave cavity and a Teflon-coated magnetic stir bar inside the vessel. Temperature, pressure and power profiles were monitored in both cases through the EASY-Control software provided by the manufacturer. Electronic Supplementary Material (ESI) for Organic & Biomolecular Chemistry This journal is © The Royal Society of Chemistry 2012

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Study of N1-alkylation of indoles from the reaction of 2(or 3)-

aminoindole-3-(or 2)carbonitriles with DMF-dialkylacetals.†

Yvonnick Loidreau,a,b

Sigismund Melissen,b Vincent Levacher,

b,c Cédric Logé,

d Jérôme Graton,

e Jean-

Yves Le Questel,e*

Thierry Bessona,b*

a Université de Rouen, U.F.R. Médecine – Pharmacie, 22 boulevard Gambetta, 76183 Rouen Cedex 1, France. Fax: +33(0) 235592965; Tel:

+33(0)235592904 or +33(0)235148399; E-mail: [email protected] b CNRS, Laboratoire C.O.B.R.A., UMR 6014 & FR3038, Institut de Recherche en Chimie Organique Fine (I.R.C.O.F.) rue Tesnière, 76130 Mont Saint-Aignan, France c INSA de Rouen, Avenue de l’Université, 76801 Saint-Étienne-du-Rouvray Cedex, France d Université de Nantes, Nantes Atlantique Universités, laboratorie de Chimie thérapeutique, Cibles et Médicaments des Infections, de l’Immunité et du cancer, IICiMed UPRES EA 1155, U.F.R. Sciences Pharmaceutiques et Biologiques, 1 rue Gaston Veil, 44035 Nantes, France e

Université de Nantes, Chimie et Interdisciplinarité: Synthèse, Analyse, Modélisation (CEISAM), UMR CNRS 6230, 2 rue de la Houssinière –

BP 92208, 44322 Nantes Cedex 3, France. Fax: +33(0)251125712; Tel: +33(0)251125563; E-mail: [email protected]

Supporting Information

General Information

All reactions were monitored by thin-layer chromatography with silica gel 60 F254 pre-

coated aluminium plates (0,25mm). Melting points of solid compounds were measured on an

Electrothermal IA 9000 melting point apparatus (compounds 3 and 4) or a STUART

apparatus advanced SMP3 with a precision of ±0.5°C (compounds 1, 2, 5-9) and are

uncorrected. IR spectra were recorded on a PerkinElmer Spectrum 100 Series FT-IR

spectrometer. Liquids and solids were applied on the Single Reflection Attenuated Total

Reflectance (ATR) Accessories. Absorption bands are given in cm-1

.

1H,

13C and

19F NMR spectra were recorded on an AVANCE 400 MHz spectrometer

(compounds 3 and 4) or on a Bruker DXP 300 spectrometer at 300, 75 and 282 MHz

respectively (compounds 1, 2, 5-9). Abbreviations used for peak multiplicities are s: singlet,

d: doublet, t: triplet, q: quadruplet, m: multiplet and br (broad). Coupling constants J are given

in Hertz (Hz) and chemical shifts are given in parts per million (δ) and calibrated with

DMSO-d6 or D2O (residual solvent signals). Mass spectra analysis was performed by the

Mass Spectrometry Laboratory of the University of Rouen. Mass spectra (EI) were recorded

with a Waters ZQ 2000 and a Waters LCP 1er

XR spectrometers.

Microwave experiments were conducted in two commercial microwave reactors especially

designed for synthetic chemistry. Start SYNTHTM

(Milestone S.r.l. Italy) is a multi-mode

cavity with a microwave power delivery system ranging from 0 to 1200 W. Open vessel

experiments were carried out in a 250 mL round bottom flask fitted with a reflux condenser.

The temperature was monitored via a fibre-optic contact thermometer protected in a Teflon

coated ceramic well inserted directly in the reaction mixture or via contact-less infrared

pyrometer. The vessel contents were stirred by means of an adjustable rotating magnetic plate

located below the floor of the microwave cavity and a Teflon-coated magnetic stir bar inside

the vessel. Temperature, pressure and power profiles were monitored in both cases through

the EASY-Control software provided by the manufacturer.

Electronic Supplementary Material (ESI) for Organic & Biomolecular ChemistryThis journal is © The Royal Society of Chemistry 2012

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Multi SYNTHTM

(Milestone S.r.l. Italy) is a novel dedicated microwave system for synthetic

applications. It allows a fast reaction optimization providing high energy density in a single-

mode like configuration and an efficient scale-up (maximum working volume 300 mL)

through parallel synthesis in a multi-mode configuration. The instrument features a special

shaking system that ensures high homogeneity of the reaction mixtures. It is equipped with an

indirect pressure-control through pre-calibrated springs at the bottom of the vessel shields and

with both, contact-less infrared pyrometer (IRT) and fibre-optic contact thermometer (FO) for

accurate temperature measurement. It is noteworthy that the IRT can be calibrated directly on

the temperature read by the FO to ensure the highest accuracy and reproducibility.

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dioxane

dioxane

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NN

CN

(5a)

N

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NN

CN

(5c)

N

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CH2Cl2

CH2Cl2

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