Structural and Chemical Control of Supramolecular ... · Structural and Chemical Control of...
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Structural and Chemical Control
of Supramolecular Coordination
Self-Assembly Confined on Metal
Surfaces Ziliang Shi (石子亮) Department of Physics, The Hong Kong University of Science and Technology, Clear Water Bay, Hong Kong Rm. 4503, Academic Building, HKUST 10:00am, 09 August 2012
Thesis Defense
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1. Introduction
2. Structural and chemical controls through
a) modifying the chemical states of the organic components;
b) tuning the external environments;
c) controlling the thermodynamic and kinetic process;
3. Electronic states of artificial “quantum dots”
4. Summary and perspectives
5. Acknowledgements
OUTLINE
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2. Structural and chemical controls through
a) modifying the chemical states of the organic components;
TPyP on Au(111), TPyP-Cu on Au(111)
b) tuning the external environments;
TPyP-PBTP , TPyB-TPyP, TPyB-Cu
c) controlling the thermodynamic and kinetic process;
TPyB-Cu and TPyB-Fe, ZnTPyP-Cu
3. Electronic states of artificial “quantum dots” TPyB-Cu on Au(111), TPyB-Cu on Cu(111) (Phase I, II and III)
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Introduction - Principles
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• Bottom-up
– The supramolecular self-assembly in 3-dimensions (3D)
Building blocks (metal ions/atoms, organic ligands)
Reversible Non-covalent bonding
interactions
Self-selection, self-recognition
Self-assembly in a thermodynamic and kinetic process
O. Yaghi et al. Nature 423, 705 (2003)
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• From 3D to reduced dimensions
- Supramolecular self-assembly confined on metal surfaces
Well-defined metal surfaces (e.g. the Au(111) surface)
molecule/atom-substrate interaction
molecule-molecule/atom interaction
effects on ordering, conformation, electronic levels of the adsorbates and the patterned surface
New aspects of 2D systems
Introduction - Principles
F. Klappenberger, presentation in visiting HKUST (2009)
Surface sensitive techniques
Scanning tunneling
microscopy (STM)
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N. Lin et al., Dalton Trans., 2006, 2794–2800.
• Studies of 2D supramolecular self-assemblies in ultra-high vacuum environment (pressure ~ 1.0E(-10) mbar)
Introduction – Methodology
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2. Structural and chemical controls through
a) modifying the chemical states of the organic components;
TPyP on Au(111), TPyP-Cu on Au(111)
b) tuning the external environments;
TPyP-PBTP
c) controlling the thermodynamic and kinetic process;
TPyB-Cu and TPyB-Fe
3. Electronic states of artificial “quantum dots” TPyB-Cu on Au(111), TPyB-Cu on Cu(111)
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TPyP on Au(111) • The bifunction of the TPyP molecule
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W. Auwärter, et al., J. Chem. Phys. 2006, 124, 194708.
Pyridyl end-group (py)
Pyrrolic macrocycle
+ metal (Cu, Fe, …) e.g. react with metal (Cu, Zn, …)
TPyP (tetra-pyridyl-porphyrin )
11.1 Å
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• Deposition of TPyP on Au(111)
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TPyP on Au(111)
a= 1.39 nm b = 2.74 nm
ab = 93 °
Weak intermolecular interaction (e.g. H-bond, Van der Waals, etc. )
a
b
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TPyP on Au(111) • Charging the sample to modify the chemical state of
the TPyP macrocycle
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R
Electron-beam treatment (EBT)
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TPyP on Au(111) • The emergence of the network structure after EBT
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η (network) / η(close-packing) = 4.0
50 nm x 50nm
Kagome network
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TPyP on Au(111) • TPyP-Au Kagome network
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Au-py coordination bonding Side length of the rhombus = 4.1 nm
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Co-deposition of TPyP and Cu on Au(111)
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Post-annealing temperatures increase
Close-packing Rhombus
T
RT 180
Kagome
240
TPyP-Cu network
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TPyP and TPyP-Cu on Au(111)
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Codeposition With Cu
Au adatoms
EBT
Rhombus network
Kagome network
Annealing at high temperatures (240 °C)
Close-packings
• Modification of building blocks via two methods
Au-py coordination
Modified chemical
state
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2. Structural and chemical controls through
a) modifying the chemical states of the organic components;
TPyP on Au(111), TPyP-Cu on Au(111)
b) tuning the external environments;
TPyP-PBTP
c) controlling the thermodynamic and kinetic process;
TPyB-Cu and TPyB-Fe
3. Electronic states of artificial “quantum dots” TPyB-Cu on Au(111), TPyB-Cu on Cu(111)
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TPyP-PBTP bicomponent system • The TPyP, PBTP molecules
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Fe
4′,4′′′′-(1,4-phenylene)bis(2,2′:6′,2′′-terpyridine)
(PBTP)
Au(111) surface
(TPyP)
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15nmx15nm
10nm
Co-deposition of PBTP, TPyP and Fe • Mixtures of two types of networks- rhombus (I) and
Kagome (II)
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Structure models
PBTP
TPyP(iron metalated)
PBTP/TPyP
= 2:1
Rhombus
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Kagome
•Identical adsorption sites •Identical coordination configuration •Identical component ratio
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Phase diagram
STM observations:
Rhombus
Kagome
mixtures
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PB
TP
TPyP
•Gas phase of extra PBTP •Occupation area: 10 nm²/TPyP (Rhombus) 12 nm²/TPyP (Kagome) - Gas-phase PBTP selects Rhombus network
Transition mechanism - From III to I
2:1
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- Inclusion of PBTP selects Kagome network
•Gas phase of extra PBTP •Cavity size: 10 nm² (Rhombus) 28 nm² (Kagome)
Transition mechanism - From I to II
25nmx25nm
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30nmx30nm
Process of the metallation of TPyP on surfaces
W. Auwärter, et al, ChemPhysChem 2007, 8, 250 – 254.
Dark/bright (intrinsic / iron-metallated) TPyPs distribute randomly in both types of networks.
Chemical control
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•Chemical diversity:
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Au(111)
20nm
30nmx30nm
ZnTPyP
Chemically pure phase of networks
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The rhombus network with bi-organic(PBTP and ZnTPyP) and bi-metallic(Zn and Fe) components covers an entire surface.
20nm
Pure structural and chemical phase
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2. Structural and chemical controls through
a) modifying the chemical states of the organic components;
TPyP on Au(111), TPyP-Cu on Au(111)
b) tuning the external environments;
TPyP-PBTP
c) controlling the thermodynamic and kinetic process;
TPyB-Cu and TPyB-Fe
3. Electronic states of artificial “quantum dots” TPyB-Cu on Au(111), TPyB-Cu on Cu(111)
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TPyB coordination system • Method – STM and low-energy electron diffraction
(LEED)
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STM scanning at room temperature
•STM illustration is derived from http://nanohub.org/topics/AQME/Image:pic3_stm.png •LEED illustration is derived from http://www.chembio.uoguelph.ca/thomas/oldthom/LEED001.GIF
Variable-temperature-LEED
Cu Fe TPyB
UHV system
Au(111)
(1,3,5-tris(pyridyl)benzene)
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FFT
•STM(20nmx20nm) TPyB-Cu Honeycomb network, •Lattice const.=2.73nm(±0.05nm) •2-fold Cu-py coordination bond •Domain orientation difference: 28 degrees
•LEED beam-energy=15.0V •Lattice const.(derived)=2.76nm(±0.05nm) •Domain orientation difference: 28 degrees
Cu
TPyB
TPyB-Cu coordination network
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TCu~600K
571K
Variable temperature LEED of TPyB-Cu
TPyB●Cu ↔ TPyB+Cu
293K 643K
(0,1)
Annealing
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TPyB-Fe coordination network
•STM (11.1nmx11.1nm) TPyB-Fe Triangular network •Lattice const.=1.40 nm(±0.05nm) •3-fold Fe-py coordination bond •Domain orientation difference: 22 degrees
TFe~680K TCu~600K
TPyB●Fe ↔TPyB + Fe
•LEED beam-energy=20.0V •Lattice const.(derived)=1.38nm(±0.05nm) •Domain orientation difference: 22 degrees
TPyB Fe
Annealing 27
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Competition of two bonding modes?
Fee
ener
gy c
han
ge
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TPyB-Cu network TPyB-Fe network
TFe~680K TCu~600K >
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1. codeposit Fe and Cu; 2. deposit TPyB
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Au(111) TP
yB
293K 400K
[Fe-py]/ [Cu-py] ~9.0 Only Fe-TPyB networks, no Cu-TPyB networks observed
Cu-TPyB
Fe-TPyB
Annealing
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Reaction
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1. codeposit Fe and Cu; 2. deposit TPyB
TFe~680K TCu~600K > Fe
e e
ner
gy c
han
ge
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1. codeposit TPyB and Cu; 2. deposit Fe
Au(111) TP
yB
293K 410K
450K
500K
•Cu●TPyB network •Fe islands
•Cu●TPyB network •Fe●TPyB network
Annealing
•Fe●TPyB network •Cu islands
•Fe●TPyB network •Cu●TPyB network
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Variable temperature LEED (Sequence-II)
293K 449K 549K 293K
490K Cu + TPyB ↔ Cu●TPyB
TCu~600K
293K
571K
293K
571K
Cu●TPyB network Fe●TPyB network
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Reaction
293K
Kinetic trap
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1. codeposit TPyB and Cu; 2. deposit Fe Fe
e e
ner
gy c
han
ge
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1. codeposit TPyB and Cu; 2. deposit Fe
Reaction
Fee
en
ergy
ch
ange
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1. codeposit TPyB and Cu; 2. deposit Fe
Reaction
490K (100K lower)
500K
Fee
en
ergy
ch
ange
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2. Structural and chemical controls through
a) modifying the chemical states of the organic components;
TPyP on Au(111), TPyP-Cu on Au(111)
b) tuning the external environments;
TPyP-PBTP
c) controlling the thermodynamic and kinetic process;
TPyB-Cu and TPyB-Fe
3. Electronic states of artificial “quantum dots” TPyB-Cu on Au(111), TPyB-Cu on Cu(111)
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• Parallel to the surface :
plane wave
• Near free electrons:
Parabolic E~k dispersion
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(E) = const. = m*
h2
Surface-electron state of at surface of a crystal
F. Klappenberger, the presentation in visiting HKUST (2009) Y. Pennec, et al., Nature Nanotech. 2, 99 (2007).
• Scanning tunneling spectroscopy (STS)
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Effective potentials for surface state confinement
• Quantum corrals of metallic adatoms
‘quantum corral‘ of 48 Fe
http://plus.maths.org/content/schrodingers-equation-action Crommie, Lutz & Eigler, Science 264, 218 (1993) F. Klappenberger, et al. Nano Lett. 9, 3509 (2009)
r = 7.13 nm
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• Organic adsorbates
Mapping of electronic
density states
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Modulation of surface electronic states by 2D coordination networks • STS of the center of cavities (“quantum dots”) of
TPyB-Cu network
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+
U (V)
dI /
dV
I
/ V
(a
. u.)
Setpoints: U = +0.1 V, I = 20 pA; 77K.
Lock-in: f = 1777 Hz; V(modulation) = 20 mV; Time const. = 30 ms.
• Au(111) • Center of cavities • subtraction
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• Downshift of the onset - new states on lower energy levels
• broadening of the slope
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U (V)
dI /
dV
I
/ V
(a
. u.)
• Au(111) • Center of cavities • subtraction
67 mV
-0.48 V -0.55 V
Modulation of surface electronic states by 2D coordination networks
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Modelling the effective potentials
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• Solving the Schrödinger equation of free electrons modulated by a periodic potential
y(Cu) = WVcu / 2|∆x|
W = 2.5 Å; L = 5.7 Å
2.73 nm
L
W
W
∆ = -67 mV
Vm = 100 meV; Vcu = - 220 meV;
-70meV
The simulations were conducted by Mr. ABRAHAMSSON Richard and Mr. NG Ka Long Gary.
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Tailoring the effective potential • One type of TPyB-Cu coordination networks on Cu(111)
surface
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U (V)
dI /
dV
I
/ V
(a
. u.)
• Cu(111) • Center of cavities TPyP-Cu on Cu(111)
0.20V -0.24 V -0.44 V +
+
Physisorbed
Chemisorbed
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U (V)
• Cu(111) • Center of cavities
0.20V -0.24 V -0.44 V
Tailoring the effective potential
43
Vm = 100 meV; (Physisorbed)
Vcu = - 185 meV;
Vm’ = 800 meV (Chemisorbed)
0.18 eV
2.53 nm
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SUMMARY
44
• Controlling supramolecular self-assembly via the strategy of
a) modifying the chemical states of the organic components;
b) tuning the external environments
c) controlling the thermodynamic and kinetic process;
• Electronic states of artificial “quantum dots”
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Publications
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1. Y. Li, J. Xiao, T. Shubina, M. Chen, Z. Shi, M. Schmid, H-P. Steinrück, M.
Gottfried, N. Lin, J. Am. Chem. Soc. 134, 6401 (2012)
2. J. Liu, T. Lin, Z. Shi, F. Xia, L. Dong, P. N. Liu, N. Lin, J. Am. Chem. Soc.
133, 18760 (2011)
3. Z. Shi, T. Lin, J. Liu, P. N. Liu, N. Lin, CrystEngComm 13, 5532 (2011)
4. Z. Shi, J. Liu, T. Lin, F. Xia, P. N. Liu, N. Lin, J. Am. Chem. Soc. 133, 6150
(2011)
5. Z. Shi, N. Lin, J. Am. Chem. Soc. 132, 10756 (2010).
6. Z. Shi, N. Lin, ChemPhysChem 11, 97, (2010)
7. Z. Shi, N. Lin, J. Am. Chem. Soc. 131, 5376 (2009).
8. Y. Ning, J. Jiang, Z. Shi, Q. Fu, J. Liu, Y. Luo, B. Z. Tang, N. Lin, J. Phys.
Chem. C, 113, 26 (2009).
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ACKNOWLEDGEMENTS
Prof. LIN Nian
Current members:
Mr. WANG Shiyong
Mr. LIN Tao
Mr. CHENG Chen
Dr. WANG Weihua
Dr. DONG Lei
Dr. ADISOEJOSO Jinne
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Former members:
Mr. LI Yang
Dr. THAKUR Ram-Krishna
Dr. NING Yuesheng
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ACKNOWLEDGEMENTS Collaborators: • Benzhong Tang, Jianzhao Liu
(Department of Chemistry, HKUST, Hong Kong) • Yi Luo, Jun Jiang, Qiang Fu
(Royal Institute of Technology, Stockholm, Sweden) • Pei Nian Liu, Jun Liu, Fei Xia (East China University of Science and Technology, Shanghai, China) • J. Michael Gottfried ‡, Jie Xiao, Min Chen, Martin Schmid,
Hans-Peter Steinrück (Lehrstuhl für Physikalische Chemie II, Universität Erlangen-Nürnberg,
Germany.
‡ Fachbereich Chemie, Philipps-Universität Marburg, Germany)
• Tatyana E. Shubina (Computer-Chemie-Centrum, Universität Erlangen-Nürnberg, Germany)
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ACKNOWLEDGEMENTS
Thesis Committee Members
Prof. WONG Yung Hou
Prof. ALTMAN Michael
Prof. WEN Weijia
Prof. TANG Benzhong
Prof. GOTTFRIED Michael
Prof. XU Jianbin
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Thanks For Your Attention!
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STM • Scanning tunneling microscopy (STM) on the self-
assembly patterned surface
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z
It V s (EF) exp [-aF1/2z]
z
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Low-temperature scanning tunneling spectroscopy (LT-STS)
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z
x
y
Vx, Vy, Vz = const.
V
I(t)
Vb(t) = + sin(t)
E = eV
dI/dV(E)
Lock-In
I V s (EF+ eV) exp [-aF1/2z] dI/dV(E) density of states (E)
Probe
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Au-py Kagome models
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Since we can address the orientation of the Au (111) lattice by imaging the herringbone reconstruction, in the model, we have slightly adjust the network with a side length 1 angstrom shorter than the stm measurement, so that all TPyP sit on the same sites of the surface, the top sites. This is reasonable considering the externded network might commensurate with the surface lattice. in such a model, Au atoms are put in the middle way of two neighboring nitrogens, this arrangement also allows the Au atoms exactly sit on the bidge sites of the Au surface. here, the Au-py bonds is 2.4 angstrom that lays in the previously reported Au-py lengths in 3D.
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TPyP on Cu(111)
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F. Klappenberger, et al., J. Chem. Phys. 2008, 129, 214702.
450K, 10 min
300K
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Modification of chemical states • Proposed mechanism - Deprotonation
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R
F. Klappenberger, et al., J. Chem. Phys. 2008, 129, 214702.
On Cu (111), “Annealing the sample to high temperatures (500K) leads to a deprotonation of the macrocycle”. [F. Klappenberger et al., 2008].
Deprotonation
- 2H +
EBT
Au-py coordination
Modified chemical
state
Co-deposition of Cu and TPyP on Au(111)
surface
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• No deprotonation stage observed
- Small Kagome coverage
- 570K. Deprotonation state not stable?
- No deprotonation?
- Au-metallation?
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Y. Li, et al., J. Am. Chem. Soc. 134,
6401 (2012)
XPS of TPyP-Cu codepostion on Au(111)
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TPyP-Cu on Ag(111) without annealing
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