Strategic Communication for High Impact ResearchScientific Publishing • Overemphasis on publishing...
Transcript of Strategic Communication for High Impact ResearchScientific Publishing • Overemphasis on publishing...
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CharlesYokoyama Ph.D.
RIKEN Brain Science Institute
Strategic Communicationfor High Impact Research
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Publication Cycle
Plan Project
Collect Data
Write Paper
Publish Paper
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Stakeholders that DefineHigh Impact Research
Proposals
Speculation
Funding-Agencies
Research
Generation
Research Institutes
Peer Review
Certification
Publishing Industries
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Two Models of Scientific Impactin Journal Publication
Plan Project
Collect Data
Write Paper
Publish Paper
Specialized journalHigh rate acceptance
Plan Project
Collect Data
Write Paper
Publish Paper
General audience journalLow rate acceptance
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Plan Project
Collect Data
Write Paper
Publish Paper
Plan Project
Collect Data
Write Paper
Publish Paper
Changed: Competition for ideas, funding, jobs, journalsUnchanged: Academic incentive system and lab structure
Two Models of Scientific Impactin Journal Publication
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Optimizing the Cycle forHigh Impact Publication
• The publication cycle is gated by HP journal standards
• High profile journal editors create and apply standards
• Apply HP journal standards to pre-submission research
- Use high profile journal standards to assess and
reverse engineer the cycle for better performance
- Use superior science communication to bridge
between low- and high-profile journal publication
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• Dear Dr. XXX,
• Thank you for submitting your manuscript, ”XXX," to Nature Neuroscience. After careful consideration, however, we have regretfully concluded that this paper is not suitable for
publication in our journal.
• Manuscripts submitted to Nature Neuroscience are evaluated by the editorial staff for their potential general interest before a decision is made as to whether they should be sent out for
peer review. We receive many more manuscripts than we can publish each month, and it is therefore our policy to review only those that seem likely to be of greatest interest to our
broad multidisciplinary readership. Manuscripts may be rejected because they are
too specialized and are likely to be of limited appeal to those
outside the immediate field, or because they represent a
relatively small conceptual advance on our present state of
knowledge, or because their subject matter is felt to be less appropriate for a journal whose main focus is on fundamental advances in our understanding of the
functioning of the nervous system.
• While we are in no way questioning the validity of your work or its interest to others in the field, I am afraid that neither we nor our adviser were persuaded that the strength of the novel
conclusions that can be drawn from this work is sufficient to justify publication in Nature Neuroscience rather than a more specialized journal. Thank you in any case for the opportunity
to consider this work; we hope that you will soon receive a more encouraging response elsewhere.
• Yours sincerely,
• XXX XXX, PhD
• XXX Editor
• Nature Neuroscience
Nature Journal Rejection Letter
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Conceptual Advance
“Under normal conditions the research scientist is not an
innovator but a solver of puzzles, and the puzzles upon which
he concentrates are just those which he believes can be both
stated and solved within the existing scientific tradition.”
-Thomas Kuhn (1962) The Structure of Scientific Revolutions
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• Term often seen in editorial rejection letters
• The currency of science - not papers or data
• Basis of most scientific evaluation systems
• Determines thought leaders and followers
The term for scientific success is understood at an intuitive but
not explicit level by a small group of editors, reviewers, and authors
A much larger group of authors do not understand the term
Conceptual Advance is the Major Determinant of Research Impact
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Average manuscript rejection rates at high profile journals:
Editor review: 60% rejected on conceptual advance
Peer review: 20% rejected on conceptual advance
10% rejected on technical concerns
10% ultimately accepted for publication
Most papers rejected on insufficient conceptual advance
A large-scale misunderstanding of conceptual advance
Journal Decisions Reveal aMismatch in Expectations
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Conceptual Advance is Absentfrom the Education System
• Graduate education system does not teach or train
learned by informal observation in the lab
• Completely missing from scholarly discussion
• Not explicitly considered in project planning
Contributes to waste at funding agencies
• Controls the outcome of all careers and fields
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What is a Concept?
• Concept: cognitive unit of knowledge or meaning
• Concepts exist in a poorly understood information
geometry -space, map, cloud, network, ontology
• Conceptual advances likely expand this geometry
• Concepts require a Gestalt language representation
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What is a Concept?
• Concept: cognitive unit of knowledge or meaning
• Concepts exist in a poorly understood information
geometry -space, map, cloud, network, ontology
• Conceptual advances likely expand this geometry
• Concepts require a Gestalt language representation
DUCK
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What is a Concept?
• Concept: cognitive unit of knowledge or meaning
• Concepts exist in a poorly understood information
geometry -space, map, cloud, network, ontology
• Conceptual advances likely expand this geometry
• Concepts require a Gestalt language representation
RABBIT
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Properties of Scientific Concepts
• Lineage – genealogy of concepts or papers that precede
• Coherence – the reproducibility/reliability of the concept
• Projection – the new questions/areas that concept opens
• Translation – the potential for applications to society
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Conceptual Advance is NovelInformation within a Lineage
Data accumulation Data interpretation
i
A B
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Conceptual Advance is NovelInformation within a Lineage
Data accumulation Data interpretation
A B
Cloud adapted from Alon (2009) Molecular Cell
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Conceptual Advance is NovelInformation within a Lineage
Data accumulation Data interpretation
• Conceptual advance size from angle of deviation
A B
C
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Conceptual Lineages Form an OntologyGrowth of a causal chain of papers
A
C
D
E
B
HPP
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Pioneer Community Ontology
Conceptual Advances are the Building Blocks of Ontologies
• Conceptual advance defines stages of a scientific field’s evolution
Research in each stage tracks different approaches to science
Each stage defines the publication cycle for individual scientists
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The Epistemological Dilemma:Science is Empirical and Linguistic
• Empiricism: knowledge gained from sensory experience
• Linguistic, Semantic, Rhetoric: techniques to describe and
contextualize empirical findings as a knowledge domain
• Empirical approach to science depends on pure observation
• Epistemological approach to science depends on meaning
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Diversification of Scientific Method
• Physics: empirical, observational methods
First scientific method is discovery science
• Biology: empirical plus epistemological methods
Second method is hypothesis, model-based
• Big data: data mining via computation and statistical methods
Third method beyond empiricism and epistemology?
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Research Impact at the Interface of Data Space & Conceptual Space
• Data are observation-dependent empirical “facts”
• Concepts are observation semi-dependent “ideas”
• Concept building: data necessary but not sufficient
• Communication: empirical data are necessary but
not sufficient. Need a semantic writing toolbox.
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Semantic Techniques to Concept Building in Manuscript Writing
• Semantics: the study of meaning and specification of meaning
in words, symbols, sentences, paragraphs, (manuscripts)
• Requires strong communication: sender to receiver/interpreter
1. Conceptual advances are semantic linguistic constructs
- semantic linguistic methods build conceptual advances
2. Conceptual advance build field-specific knowledge domains
3. Field-specific knowledge domains build scientific theories
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Semantic Proficiency Improves Conceptual Advance and Impact
• Expand scope of study with broader question or conclusion
• Reframe question or conclusions to more exciting/novel idea
• Make new interpretation from combining additional datasets
• Expand conceptual scope from combining additional datasets
- opposite of “salami-slicing” of small papers
• Create new term to more precisely/accurately describe data
• Deductive and inductive reasoning Creating logic and rhetoric
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Current Challenges inScientific Publishing
• Overemphasis on publishing in high impact journals
Turns discovery into a commodity instead of a shared resource
• Open access, peer review, and certification system
• Credit and authorship issues driven by competition
• High value science: both high impact and replicable
• Preprint servers and data sharing prior to publication
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High impact paper lineages create irregular concepts and skew knowledge domains
A
C
D
E
B
HPP
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Ontology Systems May Organize Scientific Knowledge Better than Journal Systems
- Lineage moves outward toward frontier (lineage zone)
- Coherence moves up toward z axis (coherence zone)
Coherence zone
Lineage zone
advance
advance
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Building a Sustainable High Impact Scientific Community
• Need a global publishing and data/knowledge system
• Attractive and sustainable human resources system
• Lab structure enabling effective collaborative output
• Funding and education systems for career sustainability
• Public communication that makes society a partner
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The Scientific Ecosphere Advocacy
(Public)
Publishing
(Papers)
Researcher Assessment
Graduate Education
Laboratory Structure
Funding (Grants)
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Ecosystem: Publishing Advocacy
(Public)
Publishing
(Papers)
Researcher Assessment
Graduate Education
Laboratory Structure
Funding (Grants)
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The Scientific Ecosphere Advocacy
(Public)
Publishing
(Papers)
Researcher Assessment
Graduate Education
Laboratory Structure
Funding (Grants)