Starr Hazard Computational Biology Resource...

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Transcript of Starr Hazard Computational Biology Resource...

Page 1: Starr Hazard Computational Biology Resource Centermedia.clemson.edu/ccit/COI/cu_soc_musc_collab/... · Our booth Presentations Search raining OSG esearc High Performance Computing
Page 2: Starr Hazard Computational Biology Resource Centermedia.clemson.edu/ccit/COI/cu_soc_musc_collab/... · Our booth Presentations Search raining OSG esearc High Performance Computing
Page 3: Starr Hazard Computational Biology Resource Centermedia.clemson.edu/ccit/COI/cu_soc_musc_collab/... · Our booth Presentations Search raining OSG esearc High Performance Computing
Page 4: Starr Hazard Computational Biology Resource Centermedia.clemson.edu/ccit/COI/cu_soc_musc_collab/... · Our booth Presentations Search raining OSG esearc High Performance Computing
Page 5: Starr Hazard Computational Biology Resource Centermedia.clemson.edu/ccit/COI/cu_soc_musc_collab/... · Our booth Presentations Search raining OSG esearc High Performance Computing
Page 6: Starr Hazard Computational Biology Resource Centermedia.clemson.edu/ccit/COI/cu_soc_musc_collab/... · Our booth Presentations Search raining OSG esearc High Performance Computing
Page 7: Starr Hazard Computational Biology Resource Centermedia.clemson.edu/ccit/COI/cu_soc_musc_collab/... · Our booth Presentations Search raining OSG esearc High Performance Computing

November 2009 usage trend by month

Page 8: Starr Hazard Computational Biology Resource Centermedia.clemson.edu/ccit/COI/cu_soc_musc_collab/... · Our booth Presentations Search raining OSG esearc High Performance Computing

Tue Mar 16 16:39:45 EDT 2010

Page 9: Starr Hazard Computational Biology Resource Centermedia.clemson.edu/ccit/COI/cu_soc_musc_collab/... · Our booth Presentations Search raining OSG esearc High Performance Computing

User #jobs Task description

1 8 bayesian evolution 2 75 cheminformatics 3 52 R bioinformatics 4 15 NMR analysis 5 1 User bioinformatics 6 46 User bioinformatics

Tue Mar 16 16:39:45 EDT 2010

Page 10: Starr Hazard Computational Biology Resource Centermedia.clemson.edu/ccit/COI/cu_soc_musc_collab/... · Our booth Presentations Search raining OSG esearc High Performance Computing
Page 11: Starr Hazard Computational Biology Resource Centermedia.clemson.edu/ccit/COI/cu_soc_musc_collab/... · Our booth Presentations Search raining OSG esearc High Performance Computing

In silico docking for Drug Discovery

Databases:

Several million compounds from 14 publically available/locally derived databases ZINC, NCI, Chembridge.

Software:

AUTODOCK

UCSF DOCK 6.3

Page 12: Starr Hazard Computational Biology Resource Centermedia.clemson.edu/ccit/COI/cu_soc_musc_collab/... · Our booth Presentations Search raining OSG esearc High Performance Computing

User issues Project proposals Storage Space CPU use Software Site Design In house growth EPSCOR usage growth

Page 13: Starr Hazard Computational Biology Resource Centermedia.clemson.edu/ccit/COI/cu_soc_musc_collab/... · Our booth Presentations Search raining OSG esearc High Performance Computing
Page 14: Starr Hazard Computational Biology Resource Centermedia.clemson.edu/ccit/COI/cu_soc_musc_collab/... · Our booth Presentations Search raining OSG esearc High Performance Computing