Repression of Leucyl-transfer ribonucleic acid synthetase ... · studies provide results that the...
Transcript of Repression of Leucyl-transfer ribonucleic acid synthetase ... · studies provide results that the...
Atlanta University CenterDigitalCommons@Robert W. Woodruff Library, AtlantaUniversity Center
ETD Collection for AUC Robert W. Woodruff Library
6-1-1970
Repression of Leucyl-transfer ribonucleic acidsynthetase of escherichia coliHarold L. WashingtonAtlanta University
Follow this and additional works at: http://digitalcommons.auctr.edu/dissertations
Part of the Biology Commons
This Thesis is brought to you for free and open access by DigitalCommons@Robert W. Woodruff Library, Atlanta University Center. It has beenaccepted for inclusion in ETD Collection for AUC Robert W. Woodruff Library by an authorized administrator of DigitalCommons@Robert W.Woodruff Library, Atlanta University Center. For more information, please contact [email protected].
Recommended CitationWashington, Harold L., "Repression of Leucyl-transfer ribonucleic acid synthetase of escherichia coli" (1970). ETD Collection for AUCRobert W. Woodruff Library. Paper 894.
ABSTRACT
BIOLOGY
WASHINGTON, HAROLD L, B.S., Clark College, 1968
Repression of Leucyl-Transfer Ribonucleic Acid Synthetase of
Sscherichia coli
Advisor: Dr. Luther S. Williams
Master of Science degree conferred June 1, 1970
Thesis dated June, 1970
This study was undertaken to determine whether the for
mation of leucyl-transfer ribonucleic acid synthetase (tRNA
synthetase) was "constitutive11 in nature or was subjected to
some control mechanism. The growth of wild type cultures in
minimal-glucose medium supplemented with excess leucine, as
compared to minimal-glucose medium, did not affect the
specific activity of the leucine synthetase. Using an auxo-
troph for leucine, a shift of this culture from a medium
containing excess leucine to restricting (growth rate)
amounts of leucine, resulted in a significant increase in the
specific activity of the leucyl-tRNA synthetase for the
first hour of incubation. This indicated a derepression in
the rate of formation of the enzyme. After the first hour of
incubation, there was a decline in the rate of synthesis and
some inactivation of this synthetase activity. Further
studies provide results that the addition of leucine to the
highly derepressed cultures caused repression of synthesis
and halted the inactivation of the leucyl-tRNA synthetase.
These results confirm previous findings indicating that the
rate of formation of arginyl- and histidyl-tRNA synthetase
was regulated, and suggest that the regulation of aminoacyl-
tRNA synthetase formation follows a repression-like
mechanism.
Master of Science Thesis
of
Harold L. Washington
Approved:
Major Professor
Thesis Committee Member
Thesis Committee Member / ,
Department Chairman yS .
Dean, School of Arts and
REPRESSION OF LEUCYL-TRAN5PER RIBONUCLEIC ACID
5YNTHETASE OF ESCHERICHIA COLI
A THESIS
SUBMITTED TO THE FACULTY OF ATLANTA UNIVERSITY
IN PARTIAL FULFILLMENT OF THE REQUIREMENTS
FOR THE DEGREE OF MASTER OF SCIENCE
BY
HAROLD L. WASHINGTON
DEPARTMENT OF BIOLOGY
ATLANTA, GEORGIA
JUNE 1970
TABL2 OF CONTENTS
Page
ACKNOWLEDGEMENTS vi
LIST OF TABLES vii
LIST OF FIGURES viii
Chapter
I. INTRODUCTION 1
II. REVIEW OF LITERATURE 3
III. MATERIALS AND METHODS 5
IV. EXPERIMENTAL RESULTS 9
V. DI9CUS3ION AND CONCLUSION 24
VI. SUMMARY • • 25
LITERATURE CITED 26
ACKNOWLEDGEMENTS
The author wishes to express his sincere appreciation to
Dr. Luther 3. Williams for his guidance during this research
and the preparation of this thesis. The author also wishes
to thank Dr, Roy Hunter, Jr. and Dr. Joe Key for their
suggestions on the writing of this thesis.
vx
LIST OF TABLES
Table Page
1. Effect of L-leucine limitation on specific
activity of leucyl-transfer ribonucleic acid
synthetase of strain AB1132 ... 11
2, Effect of leucine deprivation on the specific
activity of leucyl-transfer ribonucleic acid
synthetase. ••••••• ••••••••••••13
3# Effect of leucine starvation on the specific
activity of leucyl-transfer ribonucleic acid
synthetase •••••«••••••••••••• 16
vii
LIST OF FIGURES
Figure page
1. Effect of excess leucine on the specific activity
of leucyl-tRNA synthetase of strain AB1132, ... 10
2. Effect of leucine restriction on the specific
activity of leucyl-tRNA synthetase of strain
AS1132 • . • 14
3. Effect of leucine restriction on the specific
activity of leucyl-tRNA synthetase of strain
A31132 for duplicate cultures* •••• 17
4. Effect of leucine restriction on the specific
activity of leucyl-tRNA synthetase for duplicate
cultures of strain AB1132 at 2 minute intervals, • 18
5. Effect of leucine restriction on the specific
activity of leucyl-tRNA synthetase for millipore
filtered cells of strain AB1132 .,20
6. Effect of leucine restriction on the specific
activity of leucyl-tRNA synthetase after two
days of incubation, •••.,.,•••••••, 21
7. Comparison of percent charging of leucine to
leucyl-tRNA for a control and sodium periodate
treated sample , ••••••«•«••••••• 23
viii
CHAPTER I
INTRODUCTION
It has been a rather consistently asked question as to
whether aminoacyl-tRNA synthetase was "constitutive" in
nature or was subjected to some control mechanism. However,
since there are 20 activating enzymes in Escherichia coli,
the rate of formation for each enzyme is conceivably differ
ent in nature and magnitude.
Leucyl-tRNA synthetase is responsible for the attachment
of leucine to its specific tRNA. The amino acid, leucine,
is activated with ATP and the leucyl-tRNA synthetase to form
leucyl-AHP-enzyme complex. Once the amino acid becomes
activated, its specific synthetase enzyme, leucyl-tRNA
synthetase, attaches it to the terminal nucleotide on the
tRNA molecule for leucine.
Leucyl-tRNA synthetase formation could result from the
following conditions: (1) Synthesis of the synthetase could
be constitutive in nature. (2) The leucyl-tRNA synthetase is
inducible9 with its synthesis being induced by its sub
strates, which are leucine and its specific tRNA molecule.
(3) The formation of this enzyme could be regulated by end-
product repression.
This study of leucyl-tRNA synthetase was undertaken to
determine the controlling mechanism for its formation*
CHAPTER II
REVIEW OF LITERATURE
A number of studies has been made on aminoaeyl-tRNA
synthetase regulation in B. coli but it is not yet understood
in any depth. During the growth in any media, prototrophic
E. coli cells are able to maintain a nearly constant level of
the individual araino acid activating enzymes,
Nass and Neidhardt (1967} reported that most of the
evidence suggested that the synthesis of these enzymes is not
"constitutive". However, Boman, Roman, and Maas (1961} re
ported that the removal of arginine from a minimal-growth
medium has been reported not to change the differential rate
of synthesis of arginyl-tRNA syntheses in B. coli., although
the synthesis of arginine biosynthetic enzymes was acceler
ated several fold under these conditions. Ames and Gary
(1962) have concluded that the histidyl-tRNA synthetase in
Salmonella, typhinmrium is not controlled by the histidine
operon, and has the same differential rate of synthesis
regardless of the concentration of L-histidine.
Nass and Neidhardt (1967) were able to provide evidence
that the synthesis of phenylalanyl- and isoleucyl-tRNA syn
thetase was not "constitutive" but is regulated by an amino
4
acid mediated repression. Restriction of either of the
phenylalanine or isoleucine supply to the cells resulted in a
derepression in their respective synthetase. From these re
sults, it was still impossible to conclude that restriction
of appropriate amino acid supply is sufficient to derepress
other synthetases. Restriction of histidine and leucine sup
ply failed to cause derepression of the histidyl and
leucyl-tRNA synthetases. It was suggested that either mul
tiple mechanisms exist for regulating the formation of these
enzymes, or amino acid restriction is not universally effec
tive in causing derepression of aminoacyl-tRNA synthetase
formation for some, as yet unknown, reasons,
MLlliams and Neidhardt (1969) have reported that many
of these enzymes are subjected to high rates of irreversible
inactivation during growth under amino acid restriction, es
pecially when the growth is intermittent. They have suggested
that all of the enzymes exhibit a repression-like mechanism
and can adjust their rate of synthesis over a 10 to 50 fold
range.
CHAPTER III
MATERIAL3 AND METHODS
Organi sm
The organism used in this study was a strain of the
bacterium, Escherichia coli. Strain AB1132 is a multiple
auxotroph for histidine, leucine, raethionine, proline, thre»
onine and thiamine. It was obtained from Dr. Luther S.
Williams. The organism was maintained on a glucose-tryptone-
yeast extract agar slant under refrigeration.
Medium and Method of Cultivation
In all experiments, the medium used was minimal-glucose
medium of Fraenkel and Neidhardt (1961) consisting of 0.046%
»7H2O, 1.34% Na2HPO4«7H2O, 0.0011% CaCl2, and 1.36%
at a pH of 6.5. This growth medium was supplemented
with 0.2% (NH4)2S^ and 0.2% glucose as nitrogen and carbon
sources respectively. Amino acids added to the medium were
of the L-form. Leucine was added to overnight cultures at
a final concentration of 50 Ag/ml and/or ISQ^g/nal. Ml
other amino acid supplements were supplied at a final
concentration of 50y^g/ml.
Batch cultures were grown aerobically in Erlenmeyer
6
flasks on a rotary action shaker (American Optical) at 37 C.
In all cases, cells were grown, at least, overnight in the
same medium to be used at the start of the experiment. At
the beginning of each experiment, the overnight cultures were
resuspended in minimal medium at an optical density (0»D«
at 0.2 to 0.4.
Measurement of Growth
The growth of all cultures was measured with a Turner
330 spectrophotometer by the increase in optical density at
420 mu(light path = 1 cm). The growth rate constant, k,
was determined for exponentially growing cultures using the
relationship:
k = In2
mass doubling time in hr
for batch cultures.
Protein Determination
Protein concentration of cell free extracts was deter
mined by the method of Lowry, Rosebrough, Farr and Randall
(1951). Standard protein concentration was determined by
using bovine serum albumin where the concentration ranged
from 20-100 /ig/ml.
Preparation of Cell Free Extract
Cell free extract was prepared by sonic treatment with a
Branson Sonifier Cell Disrupter (Branson Instruments, Inc.}
for 1 min at a setting of #3 followed by removal of cell de
bris by centrifugation at 10,000 rpm for 10 min.
Enzyme Assay
J~14~lAttachment of L- L, CJ atnino acid__tp_tRNA (attachment assay 1.
This assay was similar to that of Williams and Neidhardt
(1969). The reaction mixture, at a final pH of 7.3, in a
total volume of 0.5 ml, contained 0.1 ml of Tris-HCl buffer,
pH 7.3, 0.1 ml ATP, pH 6.8 at 0.02 M, 0el ml of tRNA, 0.1 ml
fl4 1of L L CJ leucine and 0,1 ml of enzyme extract. The com
plete reaction mixture was incubated for 15 min at 37 C, The
reaction was terminated by adding 3 ml of 5% trichloroacetic
(TCA) then chilled for at least 10 min. Suspension was then
filtered through a membrane filter (Whatman 2.1 cm GF/A).
The precipitated RNA was washed on the filter with 10 ml of
5% TCA followed by 5 ml of 67% ethanol. The washed filters
were dried by air and counted in a Packard Tri-Carb liquid
scintillation counter and/or thin-end window Nuclear-
Chicago gas flow counter.
8
Specific activity was expressed as units of enzymes /rag
protein.
Assay for percentage charged tRNA.
The cells were grown overnight in minimal-glucose medium
supplemented with 1— Cj leucine 150/4g/ml. At the begin
ning of the experiment, the cells were sub-cultured in fresh
minimal glucose medium with no leucine. The cells were
grown in this medium and 50 ml samples were taken at 6 and
12 min intervals. The samples were sonicated and cell de
bris removed by centrifugation. The tRNA was isolated by
phenol extraction and precipitated with cold ethanol, and then
redissolved in 0.1M sodium acetate buffer at a pH of 4,5.
The redissolved tRNA for 6 and 12 min samples, along with
an excess leucine sample, was divided into two samples of
equal volume, one of which was treated with 0.1M sodium per-
iodate. The second sample was used as a control. Both
samples were assayed for leucyl-tRNA synthetase activity;
however, the tRNA used was that obtained for treated and con
trol samples. Radioactivity of the samples was determined as
a measure of the percentage charging of leucine to its tRNA
of a control sample as compared to that of the periodate
treated sample.
CHAPTER IV
EXPERIMENTAL RESULTS
This study was made to determine the effect of leucine
on the specific activity of leucyl-tRNA synthetase and deter
mine whether or not the formation of this enzyme was
"constitutive" in nature or subjected to a control mechanism
in the cell. The data collected in this study indicated that
restricted concentration of leucine had a significant effect
on the specific activity of the leucyl-tRNA synthetase. This
is shown graphically in Fig* 1, in which the culture was
initially grown in medium containing leucine (30,/tg/ml) and
then shifted to a 50 Ag concentration of leucine, as a sup
plement to minimal medium. As shown in Table 1, the specific
activity of leucyl-tRNA synthetase decreased for the first
3 hrs of incubation, but upon the addition of excess leucine
(50/<^g/ral)9 the specific activity began to increase. These
data indicated that inactivation of the enzyme occurred in
limiting leucine culture and the addition of excess leucine
halted this inactivation process.
The leucine auxotroph strain AB1132 was grown in batch
culture (minimal medium containing leucine 50^g/ml) for
Fig. 1. Effect of excess leucine on the specific
activity of leucyl-tRNA synthetase of
strain AB1132. Cells were grown in
limited leucine concentration at the
indicated time. Appropriate samples were
taken at hour intervals and the activity
of leucyl-tRNA synthetase was determined.
Specific activity is expressed as^moles
of leucine attached to tRNA/hr/mg protein,
SPECIFIC
ACTIVITY
ot\>
Ui
<J\
O)
-4
CD
<O
I1
I—
c
-n
ro-
O
ai.
o
rn
i
m•
m o
11
Table 1. Effect of L-leucine limitation on specific activity
of leucyl-transfer ribonucleic acid synthetase of
strain AB1132.
Sample (hr|
1
2
3
4
5
Condition
Leucine
limited
it
ti
Excess
leucine
u
CPHa
2044
588
424
1536
1598
CPMb
511
147
106
384
397
Protein (rag)
0.0025mg
0.0015
0.0021
0.0038
0.0038
S.A?
0.8
0.39
0.201
0.404
0.421
CPU refers to counts per hour of L Cj leucine attached totRNA.
CPM refers to counts per min of L14cJ leucine attached totRNA.
c
S.A. refers to specific activity as expressed as moles of
leucine attached to tRNA per hour per mg of protein.
12
several generations. Upon transferring the cells to leucine-
free medium, appropriate samples were taken at specific
intervals and assayed for leucyl-tRMA synthetase activity.
As shown in Table 2, synthetase activity increased from
1.13 units/mg protein during growth in restricted culture to
2.74 units/mg protein for the first hr of incubation. However
as samples were taken for the remainder of the 5 hr of the
incubation period, the specific activity decreased to 0,77
units/mg protein. This shift from a leucine culture to a no
leucine culture caused the activity of the leucyl-tRNA syn
thetase to be inactivated. The rate of formation of the
leucyl-tRNA synthetase during derepressive growth conditions
and inactivation of activity is shown in Fig. 2.
The significant observation made in this study of the
auxotroph was the fact that leucine restriction resulted in
an inactivation of formation of leucyl-tRNA synthetase
activity. To ascertain the state of leucyl-tRNA synthetase
during each hour of incubation, it was necessary to perform
similar studies using this leucine auxotroph.
The strain was grown in batch (minimal medium containing
leucine, 150Ag/ml) culture for several generations. Upon
13
Table 2, Effect of leucine deprivation on the specific
activity of leucyl-transfer ribonucleic acid
synthetase.
Sample (hr)
0
1
2
3
4
5
Condition
Excess
leucine
No
leucine
it
u
it
ii
CPHa
1348
1918
1466
1548
334
538
CPMb
337
479
366
389
83
134
Protein (mg)
0.012
0.0007
0.0009
0.0011
0.001
0.0007
S.A?
1.13
2.74
1.63
1,36
0.334
0.77
CPH refers to counts per hour of
tRNA.
CPM refers to counts per rain of
tRNA.
C14 1, Cj leucine attached to
Cjleucine attached to
"S.A. refers to specific activity as expressed as/fmoles of
leucine attached to tRNA per hour rag of protein.
Fig. 2. Effect of leucine restriction on the specific
activity of leucyl-tRNA synthetase of strain
AB1132. Cells were grown in excess leucine
overnight and shifted to a no leucine
culture. Appropriate samples were taken at
the indicated time and the activity of
leucyl-tRNA synthetase was determined. Spe
cific activity is expressed as .Amoles of
leucine attached to tRNA/hr/mg protein.
SPECIFIC
ACTIVITY
IQ
ro
ro
ro
to
OCO
o
—I
m oro-
| w >CO
.
—i
en
%
o>
to
ro
en
oo
-*
30X3i■
i
CO
^S
CO
^/^
LEUCIf/
\ \
4^
-vjO
■i
i LEUCIm
15
transferring the cells to leucine-free medium, as duplicate
cultures, appropriate samples were taken at 30 tnin intervals
and assayed for leucyl-tRNA synthetase activity. In Table 3,
it can be seen that the specific activity of leucyl-tRNA syn
thetase increased from 0.214 to 2.001 units/mg protein for
the first hr of incubation, indicating a derepression of the
rate of formation of this enzyme. After the first hr of in
cubation, there was a decline in the rate of synthesis and
considerable inactivation of this synthetase activity (from
2.001 to 0.313). This rate of formation and concomitant
inactivation of activity of the leucyl-tRNA synthetase under
these growth conditions is shown in Fig. 3.
The derepression period shown in Fig. 3 was examined by
growing the cells in batch cultures supplemented with 150Ag
of L-leucine and transferred to a no leucine culture medium
and removing samples at 2 min intervals for a 15 min incuba
tion period. There was an increase in the rate of derepres
sion of formation of the leucyl-tRNA synthetase at a steady
rate (Fig. 4).
The procedure in this experiment was the same as des
cribed earlier, except that in the shift from excess leucine
16
Table 3. Effect of leucine starvation on the specific
activity of leucyl-transfer ribonucleic acid
synthetase.
Sample Condition CPHe CPM Protein (rag) S.A.*
3
4
5
6
8
9
No
leucine
it
tt
tt
tt
tt
it
u
it
1178
4854
9346
2270
9346
1536
I486
2808
7792
7148
1454
1010
1066
2912
2256
2892
294
1213
2336
567
2336
334
371
702
1948
1787
363
252
266
728
564
723
0.0055
0.00515
0.00495
0.00625
0.00467
0.0049
0.00522
0.0052
0.00515
0.00467
0.0045
0.00432
0.00501
0.00503
0.00515
0.00522
0.214
0.942
0.772
0.363
2.001
0.313
0.301
0.54
1.513
1.528
0.323
0.233
0.212
0.578
0.438
0.554
3CPH refers to counts per hour of L14CJ leucine attached totRNA. r
Ij leucine attached toI34cjbCPM refers to counts per min of
tRNA.
CS.A. refers to specific activity as expressed as ^moles of
leucine attached to tRNA per hour mg of protein.
Represents a calculation for duplicate cultures.
Fig. 3. Effect of leucine restriction on the specific
activity of leucyl-tRNA synthetase of strain
AB1132 for duplicate cultures. Cells were
grown in excess leucin© and transferred to a
no leucine culture. Appropriate samples were
taken at 15 min intervals and the activity of
leucyl-tRNA synthetase (•-♦;4-4 was determined.
Specific activity is expressed as zuaoles of
leucine attached to tRNA/hr/mg protein.
SPECIFC
ACTIVITY
E 15
o 01-
o-
rs>
<p
Fig,
120 135»lOSI
ro
-I-
»f
?■?
Fig. 4, Effect of leucine restriction on the specific
activity of leucyl-tRNA synthetase for dupli
cate cultures of strain AB1132 at 2 min
intervals. Cells were grown in excess leucine
and transferred to a no leucine culture.
Jlppropriate samples were taken at 2 min inter
vals for 15 min and the activity of leucyl-tRNA
synthetase was determined. Specific activity is
expressed as/fmoles of leucine attached to
tRNisk/hr/mg protein.
18
SPECIFIC ACTIVITY
,0 CVJ O.
to cvioq
cviis
CM<0
cvi
SPECIFIC ACTIVITY
cvi cvi
cvi
oo
CVI ^z
o S
UJ
CVI
00
cvi
O
Fig. 4
19
(50/fg/ml) to no leucine, the cells were taillipore filtered
from the original medium then transferred to a no leucine
medium. Samples were taken from this culture every 30 min
and the results indicated that the derepression of the rate
of synthesis and inactivation in activity of the leucyl-tRNA
synthetase occurred, but derepression was of sufficient rate
to allow a net increase in measurable activity of the enzyme
(Fig. 5). The rate of derepression occurred at about twice
the rate of inactivation, therefore the net change was that
of derepression.
The results of a study of the activity of leucyl-tRNA
synthetase over a two day period of incubation can be seen
in Fig. 6. The specific activity at the onset of the experi
ment, being 0.196, only decreased to 0.193 after 2 days of
incubation. The data suggest that the rate of synthesis and
inactivation of this enzyme were balanced for the duration of
the incubation period employed in this study.
Percent Charging of Leucyl-tRNA
The strain AB1132 was grown in batch culture containing
150/Cg/ml of leucine and transferred to a no leucine culture.
Fig, 5. Effect of leucine restriction on the specific
activity of leueyl-tRNA synthetase for milli-
pore filtered cells of strain AB1132, Cells
were grown in excess leucine and raillipore
filtered from the original medium then trans
ferred to a no leucine medium* Appropriate
samples were taken at the indicated time and
the activity of leucyl-tRNA synthetase was
determined* Specific activity is expressed
as/^moles of leucine attached to tRNA/hr/mg
protein*
SPECIFIC
ACTIVITY
m
too
Fig, 6« Effect of leucine restriction on the specific
activity of leucyl-tRNA synthetase after two
days of incubation. Cells were grown in ex
cess leucine and transferred to a no leucine
culture. Samples were taken at the indicated
time and the activity of leucyl-tRNA synthe
tase was determined. Specific activity is
expressed as/tooles of leucine attached to
tRNA/hr/mg protein.
O
SPECIFICACTIVITY
_.
i_—
ro
ro
K)
22
Samples were taken at 6 and 12 min time periods. The tRNA
was precipitated and divided into a control and sodium
periodated treated sample. Sodium periodate cleaves the
bonds that form cis-hydroxyl groups of ribose of leucine
tRNA, except when leucine is attached to 3* OH groups of the
ribose sugar. As shown in Fig. 7, the percent charging of
leucine tRNA (in. vivo) was essentially the same for both con
trol and treated sample. This result suggests that the change
in rate of synthesis (derepression/repression) and inactiva-
tion of activity of leucyl-tRNA synthetase was not tightly
coupled with the rate of acylation of leucine to leucine
tRNA.
Fig. 7. Comparison of percent charging of leucine to
leucyl-tRNA for a control and sodium periodate
treated sample. The strain AB1132 was grown
in batch culture containing 150>5rg/ml of leu
cine and transferred to a no leucine culture.
Samples were taken at a 6 and 12 min time
periods. The tRNA was precipitated and
divided into a control (•-*•) and sodium
periodate treated sample
23
o
9000-
8000"
7000-
6000-
5000"
4000-
0 4 6
TIME (MIN)
Fig. 7
8
—r~
10
—T"
12
CHAPTER V
DISCUSSION AND CONCLUSION
The results presented in this study provide evidence
that the synthesis of leucyl-tRNA synthetase is not **con~
stitutive" in nature but is regulated by a leucine mediated
repression.
Nass and Neidhardt (1967) reported that restriction of
either phenylalanine or isoleucine supply to the cells
caused a derepression of their respective rates of synthesis.
From these results, however, they were still unable to con
clude that restriction of appropriate amino acid supply is
sufficient to derepress other synthetases. Furthermore, in
this study, it was shown that although inactivation occurred
during leucine restriction, derepression in the rate of
formation of the leucyl-tRNA synthetase did occur.
As suggested by Nass and Neidhardt (1967), there is
always a possibility of there being multiple synthetases for
a given amino acid. Yu (1966} has reported that there might
be multiple leucyl-tRNA synthetases in E. coli^. This could
be a probable explanation for the observation that dere
pression in the rate of formation of the leucyl-tRNA
synthetase is apparently followed by inactivation of the same
enzyme activity during prolonged leucine restricted growth.
24
CHAPTER VI
SUMMARY
The results of experiments reported in this thesis are
summarized as follows:
1. Synthesis of leucyl-tRNA synthetase is not "consti
tutive1* in nature but regulated by leucine mediated
repression.
2. Readdition of leucine to an auxotroph caused an in
crease in the leucyl-tRNA synthetase activity by
halting the turnover of this activity during
leucine restriction.
3. Leucine restriction caused a two-fold inactivation
of the leucyl-tRNA synthetase activity.
4. The percentage charging of leucine to its specific
tRNA is not specifically correlated with the rate
of formation of leucyl-tRNA synthetase and level of
exogenous supply of leucine to the cell.
25
LITERATURE CITED
Ames, B. N., and B. Gary. 1962. Histidine operon. pp. 322-342.
In B. N. Ames and P. E. Hartman, (ed.) The molecular basis
of neoplasia. University of Texas Press, Austin.
Eoraan, H. G., and I. A. Boman, and W. K. Maas. 1961. Regulation
of OTC and arginine activating enzyme in Bscherichia coli.
pp. 297-304. In I. W. Goodwin and O. Lindberg, (ed.)
Biological structure and function. Vol I. Academic Press,
New York.
Praenkel, D. G., and F. C. Neidhardt. 1961. Use of chloram-
phenical to study control of RNA synthesis in bacteria.
Biochem. Biophys. Acta 53s96.
Lowry, D. H., and Rosebrough, N. V., Farr, A. L., and R. J.
Randall. 1951. Protein measurement with the folin-
phenol reagent. J. Biochem. 193:265.
Nass, G., and F. C. Neidhardt. 1967. Regulation of formation
of aminoacyl-ribonucleic acid synthetase in Sscherichia
coli. Biochem. Biophys. Acta 134s347.
Williams, L. 5., and F. C. Neidhardt. 1969. Synthesis and
inactivation of amino acyl-transfer RNA synthetase
during growth of Sscherichia coli. J. Mol. Biol. 43s529.
Yu, C. T. 1966. Multiple forms of leucyl-tRNA synthetase of
Bscherichia coli. Cold Spring Harbor Symposia on Quanti
tative Biology. Vol. XXXI. pp. 565-570.
26
ABSTRACT
BIOLOGY
WASHINGTON, HAROLD L, B.S., Clark College, 1968
Repression of Leucyl-Transfer Ribonucleic Acid Synthetase of
Sscherichia coli
Advisor: Dr. Luther S. Williams
Master of Science degree conferred June 1, 1970
Thesis dated June, 1970
This study was undertaken to determine whether the for
mation of leucyl-transfer ribonucleic acid synthetase (tRNA
synthetase) was "constitutive11 in nature or was subjected to
some control mechanism. The growth of wild type cultures in
minimal-glucose medium supplemented with excess leucine, as
compared to minimal-glucose medium, did not affect the
specific activity of the leucine synthetase. Using an auxo-
troph for leucine, a shift of this culture from a medium
containing excess leucine to restricting (growth rate)
amounts of leucine, resulted in a significant increase in the
specific activity of the leucyl-tRNA synthetase for the
first hour of incubation. This indicated a derepression in
the rate of formation of the enzyme. After the first hour of
incubation, there was a decline in the rate of synthesis and
some inactivation of this synthetase activity. Further
studies provide results that the addition of leucine to the
highly derepressed cultures caused repression of synthesis
and halted the inactivation of the leucyl-tRNA synthetase.
These results confirm previous findings indicating that the
rate of formation of arginyl- and histidyl-tRNA synthetase
was regulated, and suggest that the regulation of aminoacyl-
tRNA synthetase formation follows a repression-like
mechanism.
SPECIFIC
ACTIVITY
ot\>
Ui
<J\
O)
-4
CD
<O
I1
I—
c
-n
ro-
O
ai.
o
rn
i
m•
m o
11
Table 1. Effect of L-leucine limitation on specific activity
of leucyl-transfer ribonucleic acid synthetase of
strain AB1132.
Sample (hr|
1
2
3
4
5
Condition
Leucine
limited
it
ti
Excess
leucine
u
CPHa
2044
588
424
1536
1598
CPMb
511
147
106
384
397
Protein (rag)
0.0025mg
0.0015
0.0021
0.0038
0.0038
S.A?
0.8
0.39
0.201
0.404
0.421
CPU refers to counts per hour of L Cj leucine attached totRNA.
CPM refers to counts per min of L14cJ leucine attached totRNA.
c
S.A. refers to specific activity as expressed as moles of
leucine attached to tRNA per hour per mg of protein.
12
several generations. Upon transferring the cells to leucine-
free medium, appropriate samples were taken at specific
intervals and assayed for leucyl-tRMA synthetase activity.
As shown in Table 2, synthetase activity increased from
1.13 units/mg protein during growth in restricted culture to
2.74 units/mg protein for the first hr of incubation. However
as samples were taken for the remainder of the 5 hr of the
incubation period, the specific activity decreased to 0,77
units/mg protein. This shift from a leucine culture to a no
leucine culture caused the activity of the leucyl-tRNA syn
thetase to be inactivated. The rate of formation of the
leucyl-tRNA synthetase during derepressive growth conditions
and inactivation of activity is shown in Fig. 2.
The significant observation made in this study of the
auxotroph was the fact that leucine restriction resulted in
an inactivation of formation of leucyl-tRNA synthetase
activity. To ascertain the state of leucyl-tRNA synthetase
during each hour of incubation, it was necessary to perform
similar studies using this leucine auxotroph.
The strain was grown in batch (minimal medium containing
leucine, 150Ag/ml) culture for several generations. Upon
13
Table 2, Effect of leucine deprivation on the specific
activity of leucyl-transfer ribonucleic acid
synthetase.
Sample (hr)
0
1
2
3
4
5
Condition
Excess
leucine
No
leucine
it
u
it
ii
CPHa
1348
1918
1466
1548
334
538
CPMb
337
479
366
389
83
134
Protein (mg)
0.012
0.0007
0.0009
0.0011
0.001
0.0007
S.A?
1.13
2.74
1.63
1,36
0.334
0.77
CPH refers to counts per hour of
tRNA.
CPM refers to counts per rain of
tRNA.
C14 1, Cj leucine attached to
Cjleucine attached to
"S.A. refers to specific activity as expressed as/fmoles of
leucine attached to tRNA per hour rag of protein.
Fig. 2. Effect of leucine restriction on the specific
activity of leucyl-tRNA synthetase of strain
AB1132. Cells were grown in excess leucine
overnight and shifted to a no leucine
culture. Appropriate samples were taken at
the indicated time and the activity of
leucyl-tRNA synthetase was determined. Spe
cific activity is expressed as .Amoles of
leucine attached to tRNA/hr/mg protein.
SPECIFIC
ACTIVITY
IQ
ro
ro
ro
to
OCO
o
—I
m oro-
| w >CO
.
—i
en
%
o>
to
ro
en
oo
-*
30X3i■
i
CO
^S
CO
^/^
LEUCIf/
\ \
4^
-vjO
■i
i LEUCIm
15
transferring the cells to leucine-free medium, as duplicate
cultures, appropriate samples were taken at 30 tnin intervals
and assayed for leucyl-tRNA synthetase activity. In Table 3,
it can be seen that the specific activity of leucyl-tRNA syn
thetase increased from 0.214 to 2.001 units/mg protein for
the first hr of incubation, indicating a derepression of the
rate of formation of this enzyme. After the first hr of in
cubation, there was a decline in the rate of synthesis and
considerable inactivation of this synthetase activity (from
2.001 to 0.313). This rate of formation and concomitant
inactivation of activity of the leucyl-tRNA synthetase under
these growth conditions is shown in Fig. 3.
The derepression period shown in Fig. 3 was examined by
growing the cells in batch cultures supplemented with 150Ag
of L-leucine and transferred to a no leucine culture medium
and removing samples at 2 min intervals for a 15 min incuba
tion period. There was an increase in the rate of derepres
sion of formation of the leucyl-tRNA synthetase at a steady
rate (Fig. 4).
The procedure in this experiment was the same as des
cribed earlier, except that in the shift from excess leucine
16
Table 3. Effect of leucine starvation on the specific
activity of leucyl-transfer ribonucleic acid
synthetase.
Sample Condition CPHe CPM Protein (rag) S.A.*
3
4
5
6
8
9
No
leucine
it
tt
tt
tt
tt
it
u
it
1178
4854
9346
2270
9346
1536
I486
2808
7792
7148
1454
1010
1066
2912
2256
2892
294
1213
2336
567
2336
334
371
702
1948
1787
363
252
266
728
564
723
0.0055
0.00515
0.00495
0.00625
0.00467
0.0049
0.00522
0.0052
0.00515
0.00467
0.0045
0.00432
0.00501
0.00503
0.00515
0.00522
0.214
0.942
0.772
0.363
2.001
0.313
0.301
0.54
1.513
1.528
0.323
0.233
0.212
0.578
0.438
0.554
3CPH refers to counts per hour of L14CJ leucine attached totRNA. r
Ij leucine attached toI34cjbCPM refers to counts per min of
tRNA.
CS.A. refers to specific activity as expressed as ^moles of
leucine attached to tRNA per hour mg of protein.
Represents a calculation for duplicate cultures.
Fig. 3. Effect of leucine restriction on the specific
activity of leucyl-tRNA synthetase of strain
AB1132 for duplicate cultures. Cells were
grown in excess leucin© and transferred to a
no leucine culture. Appropriate samples were
taken at 15 min intervals and the activity of
leucyl-tRNA synthetase (•-♦;4-4 was determined.
Specific activity is expressed as zuaoles of
leucine attached to tRNA/hr/mg protein.
SPECIFC
ACTIVITY
E 15
o 01-
o-
rs>
<p
Fig,
120 135»lOSI
ro
-I-
»f
?■?
Fig. 4, Effect of leucine restriction on the specific
activity of leucyl-tRNA synthetase for dupli
cate cultures of strain AB1132 at 2 min
intervals. Cells were grown in excess leucine
and transferred to a no leucine culture.
Jlppropriate samples were taken at 2 min inter
vals for 15 min and the activity of leucyl-tRNA
synthetase was determined. Specific activity is
expressed as/fmoles of leucine attached to
tRNisk/hr/mg protein.
18
SPECIFIC ACTIVITY
,0 CVJ O.
to cvioq
cviis
CM<0
cvi
SPECIFIC ACTIVITY
cvi cvi
cvi
oo
CVI ^z
o S
UJ
CVI
00
cvi
O
Fig. 4
19
(50/fg/ml) to no leucine, the cells were taillipore filtered
from the original medium then transferred to a no leucine
medium. Samples were taken from this culture every 30 min
and the results indicated that the derepression of the rate
of synthesis and inactivation in activity of the leucyl-tRNA
synthetase occurred, but derepression was of sufficient rate
to allow a net increase in measurable activity of the enzyme
(Fig. 5). The rate of derepression occurred at about twice
the rate of inactivation, therefore the net change was that
of derepression.
The results of a study of the activity of leucyl-tRNA
synthetase over a two day period of incubation can be seen
in Fig. 6. The specific activity at the onset of the experi
ment, being 0.196, only decreased to 0.193 after 2 days of
incubation. The data suggest that the rate of synthesis and
inactivation of this enzyme were balanced for the duration of
the incubation period employed in this study.
Percent Charging of Leucyl-tRNA
The strain AB1132 was grown in batch culture containing
150/Cg/ml of leucine and transferred to a no leucine culture.
Fig, 5. Effect of leucine restriction on the specific
activity of leueyl-tRNA synthetase for milli-
pore filtered cells of strain AB1132, Cells
were grown in excess leucine and raillipore
filtered from the original medium then trans
ferred to a no leucine medium* Appropriate
samples were taken at the indicated time and
the activity of leucyl-tRNA synthetase was
determined* Specific activity is expressed
as/^moles of leucine attached to tRNA/hr/mg
protein*
SPECIFIC
ACTIVITY
m
too
Fig, 6« Effect of leucine restriction on the specific
activity of leucyl-tRNA synthetase after two
days of incubation. Cells were grown in ex
cess leucine and transferred to a no leucine
culture. Samples were taken at the indicated
time and the activity of leucyl-tRNA synthe
tase was determined. Specific activity is
expressed as/tooles of leucine attached to
tRNA/hr/mg protein.
O
SPECIFICACTIVITY
_.
i_—
ro
ro
K)
22
Samples were taken at 6 and 12 min time periods. The tRNA
was precipitated and divided into a control and sodium
periodated treated sample. Sodium periodate cleaves the
bonds that form cis-hydroxyl groups of ribose of leucine
tRNA, except when leucine is attached to 3* OH groups of the
ribose sugar. As shown in Fig. 7, the percent charging of
leucine tRNA (in. vivo) was essentially the same for both con
trol and treated sample. This result suggests that the change
in rate of synthesis (derepression/repression) and inactiva-
tion of activity of leucyl-tRNA synthetase was not tightly
coupled with the rate of acylation of leucine to leucine
tRNA.
Fig. 7. Comparison of percent charging of leucine to
leucyl-tRNA for a control and sodium periodate
treated sample. The strain AB1132 was grown
in batch culture containing 150>5rg/ml of leu
cine and transferred to a no leucine culture.
Samples were taken at a 6 and 12 min time
periods. The tRNA was precipitated and
divided into a control (•-*•) and sodium
periodate treated sample
23
o
9000-
8000"
7000-
6000-
5000"
4000-
0 4 6
TIME (MIN)
Fig. 7
8
—r~
10
—T"
12
CHAPTER V
DISCUSSION AND CONCLUSION
The results presented in this study provide evidence
that the synthesis of leucyl-tRNA synthetase is not **con~
stitutive" in nature but is regulated by a leucine mediated
repression.
Nass and Neidhardt (1967) reported that restriction of
either phenylalanine or isoleucine supply to the cells
caused a derepression of their respective rates of synthesis.
From these results, however, they were still unable to con
clude that restriction of appropriate amino acid supply is
sufficient to derepress other synthetases. Furthermore, in
this study, it was shown that although inactivation occurred
during leucine restriction, derepression in the rate of
formation of the leucyl-tRNA synthetase did occur.
As suggested by Nass and Neidhardt (1967), there is
always a possibility of there being multiple synthetases for
a given amino acid. Yu (1966} has reported that there might
be multiple leucyl-tRNA synthetases in E. coli^. This could
be a probable explanation for the observation that dere
pression in the rate of formation of the leucyl-tRNA
synthetase is apparently followed by inactivation of the same
enzyme activity during prolonged leucine restricted growth.
24
CHAPTER VI
SUMMARY
The results of experiments reported in this thesis are
summarized as follows:
1. Synthesis of leucyl-tRNA synthetase is not "consti
tutive1* in nature but regulated by leucine mediated
repression.
2. Readdition of leucine to an auxotroph caused an in
crease in the leucyl-tRNA synthetase activity by
halting the turnover of this activity during
leucine restriction.
3. Leucine restriction caused a two-fold inactivation
of the leucyl-tRNA synthetase activity.
4. The percentage charging of leucine to its specific
tRNA is not specifically correlated with the rate
of formation of leucyl-tRNA synthetase and level of
exogenous supply of leucine to the cell.
25
LITERATURE CITED
Ames, B. N., and B. Gary. 1962. Histidine operon. pp. 322-342.
In B. N. Ames and P. E. Hartman, (ed.) The molecular basis
of neoplasia. University of Texas Press, Austin.
Eoraan, H. G., and I. A. Boman, and W. K. Maas. 1961. Regulation
of OTC and arginine activating enzyme in Bscherichia coli.
pp. 297-304. In I. W. Goodwin and O. Lindberg, (ed.)
Biological structure and function. Vol I. Academic Press,
New York.
Praenkel, D. G., and F. C. Neidhardt. 1961. Use of chloram-
phenical to study control of RNA synthesis in bacteria.
Biochem. Biophys. Acta 53s96.
Lowry, D. H., and Rosebrough, N. V., Farr, A. L., and R. J.
Randall. 1951. Protein measurement with the folin-
phenol reagent. J. Biochem. 193:265.
Nass, G., and F. C. Neidhardt. 1967. Regulation of formation
of aminoacyl-ribonucleic acid synthetase in Sscherichia
coli. Biochem. Biophys. Acta 134s347.
Williams, L. 5., and F. C. Neidhardt. 1969. Synthesis and
inactivation of amino acyl-transfer RNA synthetase
during growth of Sscherichia coli. J. Mol. Biol. 43s529.
Yu, C. T. 1966. Multiple forms of leucyl-tRNA synthetase of
Bscherichia coli. Cold Spring Harbor Symposia on Quanti
tative Biology. Vol. XXXI. pp. 565-570.
26