Questions: Embryos R Us 1. What are the relevant facts of ... · IB Biology 2.3.1 Draw and ......

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Questions: Embryos R Us 1. What are the relevant facts of this case? 2. What are some ethical questions raised by this situation? 3. Who are the stakeholders in this situation? Who will be affected by decisions that are made? 4. What are the values that play a role in the decision? 5. What are some possible solutions and their consequences? 6. What do you consider to be the best solution and why?

Transcript of Questions: Embryos R Us 1. What are the relevant facts of ... · IB Biology 2.3.1 Draw and ......

Questions: Embryos R Us

1. What are the relevant facts of this case?

2. What are some ethical questions raised by this situation?

3. Who are the stakeholders in this situation? Who will be

affected by decisions that are made?

4. What are the values that play a role in the decision?

5. What are some possible solutions and their consequences?

6. What do you consider to be the best solution and why?

Cells

Eukaryotic Cell

IB Biology

2.3.1 Draw and label a diagram of the ultra structure of a liver cell as an example of a animal

cell.

2.3.2 Annotate the diagram from 2.3.1.with the functions of each named structure.

2.3.3 Identify structures from 2.3.1 in electron micrographs of liver cells.

2.3.4 Compare prokaryotic and eukaryotic cells

2.3.5 State three differences between plant and animal cells.

2.3.6 Outline two roles of extracellular components.

IB Biology

Cell Modeling:

Next Class, you will have 60 minutes to

construct a cell model which features all

of the organelles listed in the cell

component worksheet.

You must provide all of the raw materials

and tools. All construction must be

completed in class during the 60 minute

period.

The Eukaryotic Cells

Cells that contain a nucleus

The Eukaryotic Cell

“Eu” = true “Karyo” = kernal (nucleus)

Protists, Plants, Fungi, and Animals

Internal Membrane System

Has many membranous organelles

The Eukaryotic Cell

Cytoplasm

Cytoplasm

Region inside the plasma membrane excluding the nucleus

Fluid portion of the cytoplasm between the organelles is the

cytosol

Flow of Genetic information and protein Synthesis

Nucleus, Ribosomes, Rough &

Smooth ER

Nucleus

Control Center of the Cell

Genetic material:

•chromatin

•chromosomes

Nucleolus: ribosome synthesis

Double membrane envelope with pores

1st part of Protein synthesis

Nuclear pores

Figure 4.6

Chromatin

Nucleolus

Pore

NUCLEUS

Two membranes

of nuclear

envelope

ROUGH

ENDOPLASMIC

RETICULUM

Ribosomes

Ribosomes

Manufactures Protein

Free •cytosol; •protein function in cell

Bound •endoplasmic reticulum; •membranes, organelles, and export

80S ribosomes vs 70s ribosomes in prokaryotic cell

Endoplasmic Reticulum

Endoplasmic reticulum (ER)

Continuous with nuclear envelope

Smooth ER

•no ribosomes;

•synthesis of lipids

•metabolism of carbohydrates

• detoxification of drugs and poisons

Rough ER

•with ribosomes

•synthesis of secretory proteins (glycoproteins), membrane production

**Found extensively in Pancreas

Rough Endoplasmic Reticulum makes

membrane and proteins

The rough ER manufactures membranes

Ribosomes on its surface produce proteins

1 2

3

4 Transport vesicle

buds off

Ribosome

Sugar

chain

Glycoprotein

Secretory

(glyco-) protein

inside transport

vesicle

ROUGH ER

Polypeptide Figure 4.8

SMOOTH ER

ROUGH

ER

Nuclear

envelope

Ribosomes

SMOOTH ER ROUGH ER

Figure 4.9

Golgi Apparatus (complex)

Golgi Complex Golgi apparatus

•ER products are modified, stored, and then shipped

Cisternae: flattened membranous sacs

trans face (shipping) & cis face (receiving)

Transport vesicles

The Golgi apparatus finishes, sorts,

and ships cell products

The Golgi apparatus consists of stacks of membranous sacs

These receive and modify ER products, then send them on to

other organelles or to the cell membrane

The Golgi apparatus

Golgi

apparatus

“Receiving” side of

Golgi apparatus

Transport

vesicle

from ER

New

vesicle

forming

Transport vesicle

from the Golgi

Golgi apparatus

“Shipping”

side of Golgi

apparatus Figure 4.10

Lysosomes & Vacuoles

Lysosomes digest the cell’s food and

wastes

Lysosomes are sacs of

digestive enzymes

budded off the Golgi LYSOSOME

Nucleus

Figure 4.11A

Lysosomes

Lysosomes:

Contain lysosomal enzymes (hydrolytic enzymes)

Digests food molecules (macromolecules)

Destroys bacteria

Recycles damaged organelles

Lysosomes:

Function in embryonic development in animals

Undergoes phagocytosis & engulfs material

Recycle cell’s own organic material

**Found extensively in Macrophages (WBC’s)

Figure 4.11B

Rough ER

Transport vesicle

(containing inactive

hydrolytic enzymes)

Golgi

apparatus

Plasma

membrane

LYSOSOMES

“Food”

Engulfment

of particle

Food

vacuole

Digestion

Lysosome

engulfing

damaged

organelle

Lysosomes can cause Fatal Diseases

Lysosomal Storage Diseases are hereditary that interfere with

other cellular functions

*Examples:

Pompe’s disease

Tay-Sachs disease

Vacuoles

Membrane-bound sacs (larger

than vesicles)

Food (phagocytosis)

Contractile (pump excess

water)

Central (storage in plants)

Tonoplast membrane

Vacuoles function in the general

maintenance of the cell

Plant cells contain a large

central vacuole

The vacuole has lysosomal

and storage functions

Central

vacuole

Nucleus

Figure 4.13A

-Energy Harvesting Organelles

Not found in Prokaryotic Cells

Mitochondria & Chloroplasts

Mitochondria -Site of Cellular Respiration

Mitochondria harvest chemical Energy

from food

Site for Cellular Respiration---Prod. of ATP

Uses O2 to extract energy from sugar, fats, and other

molecules

Found in cells that are motile and contractible

Has a double membrane

Mitochondria harvest chemical Energy

from food

Has Convoluted inner membranes: Cristae

Two spaces: Matrix & intermembrane space

Not part of the endomembrane system

Has its own DNA and rbosomes (able to regenerate &

divide)---Semiautonomous

Figure 4.16

Outer

membrane

MITOCHONDRION

Intermembrane

space

Inner

membrane

Cristae

Matrix

Chloroplasts convert solar energy to

chemical energy

Chloroplasts are found in plants and some protists

Chloroplasts convert solar energy to chemical energy in

sugars

Chloroplast Stroma

Inner and outer membranes

Granum

Intermembrane space Figure 4.15

The Chloroplast

Site for Photosysnthesis: combines CO2 & H2O

Converts solar energy into chemical energy (sugar

molecules)

A Type of Plastid

Three types: (Amyloplastid, chromoplast, and chloroplast)

Double membrane w/ thylakoids (flattened disks)

The Chloroplast

Grana (stacked thylakoids)

Three compartments

Stroma

Intermembrane space

Within the thylakoid membranes

Has its own DNA

Cytoskeleton

The Cytoskeleton

Fibrous proteins (actin & tubulin)

Support, cell motility, biochemical regulation, organelle movement

Microtubules: thickest (nm) tubulin protein; shape, support, transport,

Chromosome separation

The Cytoskeleton

Microfilaments:

thinnest (nm)

actin protein filaments;

motility, cell division, shape

Intermediate filaments:

middle diameter;

keratin;

shape, nucleus anchorage

The cell’s internal skeleton helps

organize its structure and activities

A network of protein fibers makes up the cytoskeleton

Figure 4.17A

Comparing Cytoskeletal Filaments

Scan image

MICROFILAMENT

Figure 4.17B

INTERMEDIATE

FILAMENT

MICROTUBULE

Actin subunit Fibrous subunits Tubulin

subunit

7 nm 10 nm

25 nm

The Cytoskeleton

Microfilaments of actin enable cells to change shape and move

• Intermediate filaments reinforce the cell and

anchor certain organelles

• Microtubules

– give the cell rigidity

– provide anchors for organelles

– act as tracks for organelle movement

Centrosomes/Centrioles

Centrosome: region near nucleus

Centrioles: 9 sets of triplet microtubules in a ring;

(used in cell replication; only in animal cells)

Internal Structure & Function

Cilia & Flagella-Eukaryotes

Internal Structure & Function

Cilia & Flagella-Eukaryotes

Cilia/Flagella

Locomotive appendages

Ultrastructure: “9+2” (9 doublets of microtubules in a ring)

(2 single microtubules in center)

Connected by radial spoke

Anchored by basal body

(nine triplets of microtubules)

Dynein arm proteins (red)

Cilia/Flagella

Connected by radial spoke

Anchored by basal body

(nine triplets of

microtubules)

Dynein arm proteins (red)

Cilia and flagella move when

microtubules bend

Eukaryotic cilia and flagella are locomotor appendages that

protrude from certain cells

A cilia or flagellum is composed of a core of microtubules

wrapped in an extension of the plasma membrane

Figure 4.18A

FLAGELLUM

Outer microtubule

doublet

Plasma

membrane

Central

microtubules

Outer microtubule

doublet

Plasma

membrane

Electron micrograph

of sections:

Flagellum

Basal body

Basal body

(structurally identical to centriole)

ECM: Extracellular Matrix

ECM Composition

Extracellular matrix (ECM) composed of:

Proteins & Carbohydrate

Specifically:

glycoproteins

glycolipids

integrins

fibronectins

collagen (50% of all protein in the body)

Extracellular Matrix (ECM)

Glycoproteins:

•proteins covalently bonded

to carbohydrate

Collagen (50% of protein in

human body

embedded in proteoglycan

(another glycoprotein-95%

carbohydrate)

Extracellular Matrix (ECM)

Fibronectins

bind to receptor proteins in

plasma

membrane called integrins

(cell communication?)

Animal cells are embedded in an extracellular matrix

– It is a sticky layer of glycoproteins

– It binds cells together in tissues

– It can also have protective and supportive

functions

Science and Art

The Art of Looking at Cells

Artists are often inspired by biology

and biology depends on art

The paintings of Wassily Kandinsky

(1866-1944) show the influence of

cellular forms

Illustration is an important way to

represent what scientists see through

microscopes

• The anatomist

Santiago Ramón y

Cajal (1852-1934) was

trained as an artist

– He drew these retina

nerve cells

Samples of Various Types of Cells

Protists may have contractile vacuoles

Figure 4.13B

Nucleus

Contractile

vacuoles

– These pump out excess water

Cell, stained for mitochondria, actin, and nucleus

Figure 4.1x

Prokaryotic cells, Bacillus polymyxa

Figure 4.4x1

Prokaryotic cell, E. coli

Figure 4.4x2

Pili on a prokaryotic cell

Figure 4.4x3

Prokaryotic flagella

Figure 4.4x4

Prokaryotic and eukaryotic cells compared

Figure 4.4x5

Paramecium, an animal cell

Figure 4.5Ax

Plant cells

Figure 4.5Bx1

Chloroplasts in plant cells

Figure 4.5Bx2

Nuclei (yellow) and actin (red)

Figure 4.6x