Pymol.org is for download of commercial PyMol or open source code, for precompiled, free win32...

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Pymol.org is for download of commercial PyMol or open source code, for precompiled, free win32 binaries see next slide.

Transcript of Pymol.org is for download of commercial PyMol or open source code, for precompiled, free win32...

Page 1: Pymol.org is for download of commercial PyMol or open source code, for precompiled, free win32 binaries see next slide.

Pymol.org is for download of commercial PyMol or open source code, for precompiled, free win32 binaries see next slide.

Page 2: Pymol.org is for download of commercial PyMol or open source code, for precompiled, free win32 binaries see next slide.

PyMol install for Win32 (simplified) • Download and install python-2.7.9.msi from this directory• Download and install pymol-1.7.2.1.win32-py2.7.exe from this directory• Download Pymol shortcut.lnk from this directory and use it to launch PyMol

Page 3: Pymol.org is for download of commercial PyMol or open source code, for precompiled, free win32 binaries see next slide.

PyMol install for Win32 (full) • Download and install Python 2.7.9

– https://www.python.org/ftp/python/2.7.9/python-2.7.9.msi• Download and install VC++ per Python 2.7

– http://aka.ms/vcpython27• Download and install PyMol from http://www.lfd.uci.edu/~gohlke/pythonlibs/#pymol

– Save the following to a local directory, e.g. C:\– pymol 1.7.2.1 cp27 none win32.whl‑ ‑ ‑ ‑– pymol_launcher 1.0 cp27 none win32.whl‑ ‑ ‑ ‑

• Open a dos prompt, then issue commands in sequence:– C:\python27\python.exe -m pip install wheel– C:\python27\python.exe -m pip install C:\pymol-1.7.2.1-cp27-none-win32.whl– C:\python27\python.exe -m pip install C:\pymol_launcher-1.0-cp27-none-win32.whl

• Launch PyMol from C:\Python27\PyMOL.exe or create a shortcut

Page 4: Pymol.org is for download of commercial PyMol or open source code, for precompiled, free win32 binaries see next slide.

PyMol install for Mac• Download and install Fink and PyMol, see

– http://www.pymolwiki.org/index.php/MAC_Install#PyMOL_and_Fink

Page 5: Pymol.org is for download of commercial PyMol or open source code, for precompiled, free win32 binaries see next slide.

PyMol resourcesManual• http://pymol.sourceforge.net/newman/userman.pdf

Wiki• http://www.pymolwiki.org/

Tutorial• http://www.pymolwiki.org/index.php/Practical_Pymol_for_Beginners• http://ihome.cuhk.edu.hk/~b102142/pymol/pymol_tutorial.html - 1w2i