Purdue School of Science Campus Bulletin 2010-2012

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    May 26, 2010 Mission 1

    School of ScienceWelcome to the Purdue School of Science!

    The School of Science offers undergraduate andgraduate programs that prepare students for a variety ofcareers. As part of its instructional mission, the schoolalso provides non-science majors with the scientific

    background to help them become more aware and better-informed consumers and citizens. Scientists advancethe boundaries of our knowledge of the natural worldthrough applied and basic research. Science benefitssociety by providing fundamental knowledge and technicaladvances in such areas as health, ecology, computerand software design, mathematical modeling, andchemistry. Science informs the social sciences withscientific understanding of psychology, applications ofstatistics, and an understanding of environmental issues.Science contributes to the arts and humanities by offeringknowledge of the physical universe and the symmetry andwonder of nature.

    In addition to preparing students for science-related

    careers and for advanced study in graduate school, anundergraduate program in one of the sciences is anexcellent background for professional study in medicine(including veterinary medicine), dentistry, businessadministration, law, and areas of the social scienceswhere quantitative methods are important.

    An education in the sciences also opens the door toemployment in the high-tech industry in sales andmanagement.Supplementing the full-time instructional staff, withranks ranging from instructor through full professor, is acontingent of well-qualified, experienced lecturers whoare recruited from the reserve of talent existing in theIndianapolis area.

    OverviewThe School of Science offers undergraduate andgraduate programs that prepare students for a variety ofcareers. As part of its instructional mission, the schoolalso provides non-science majors with the scientificbackground to help them become more aware and better-informed consumers and citizens. Scientists advancethe boundaries of our knowledge of the natural worldthrough applied and basic research. Science benefitssociety by providing fundamental knowledge and technicaladvances in such areas as health, ecology, computerand software design, mathematical modeling, andchemistry. Science informs the social sciences withscientific understanding of psychology, applications ofstatistics, and an understanding of environmental issues.Science contributes to the arts and humanities by offeringknowledge of the physical universe and the symmetry andwonder of nature.

    In addition to preparing students for science-relatedcareers and for advanced study in graduate school, anundergraduate program in one of the sciences is anexcellent background for professional study in medicine(including veterinary medicine), dentistry, businessadministration, law, and areas of the social scienceswhere quantitative methods are important.

    An education in the sciences also opens the door toemployment in the high-tech industry in sales andmanagement.Supplementing the full-time instructional staff, withranks ranging from instructor through full professor, is acontingent of well-qualified, experienced lecturers whoare recruited from the reserve of talent existing in theIndianapolis area.

    IUPUI School of Science HistoryIndiana University (IU) established its first extensioncenter at Indianapolis in 1916, although the first IU coursewas taught in Indianapolis in 1890. The Indianapoliscampus of Purdue University (PU) grew out of World WarII training programs sponsored by Purdue, and began itsmajor operations in 1946. Indiana University establishedthe Indianapolis regional campus in the mid-1960s. In1968, the Trustees of Indiana University created IndianaUniversity at Indianapolis, and less than a year later, in1969, the trustees of Indiana and Purdue universitiesmerged their Indianapolis operations to form IndianaUniversityPurdue University at Indianapolis (IUPUI).Indiana University was selected to administer the campus.Purdue brought to the merger a growing complex of

    degree programs and Purdues traditional strengths in thephysical sciences, engineering, and technology. The nameof the campus was changed to Indiana UniversityPurdueUniversity Indianapolis in 1992. As of 2009, IUPUI enrolledmore than 28,000 students.

    A restructuring of undergraduate programs at IUPUI inthe Fall of 1972 created three new schools: the Schoolof Liberal Arts (humanities and the social sciences), theSchool of Engineering and Technology, and the School ofScience (physical, behavioral, and life sciences).

    After being housed for almost 22 years on the 38th Streetcampus, the School of Science made a historic move intwo phases into two buildings on the main campus during

    1991-1993.MissionThe School of Science offers undergraduate andgraduate programs that prepare students for a variety ofcareers. As part of its instructional mission, the schoolalso provides non-science majors with the scientificbackground to help them become more aware and better-informed consumers and citizens. Scientists advancethe boundaries of our knowledge of the natural worldthrough applied and basic research. Science benefitssociety by providing fundamental knowledge and technicaladvances in such areas as health, ecology, computerand software design, mathematical modeling, andchemistry. Science informs the social sciences with

    scientific understanding of psychology, applications ofstatistics, and an understanding of environmental issues.Science contributes to the arts and humanities by offeringknowledge of the physical universe and the symmetry andwonder of nature.

    In addition to preparing students for science-relatedcareers and for advanced study in graduate school, anundergraduate program in one of the sciences is anexcellent background for professional study in medicine(including veterinary medicine), dentistry, businessadministration, law, and areas of the social scienceswhere quantitative methods are important.

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    2 Centers of Research Excellence in the School of Science May 26, 2010

    An education in the sciences also opens the door toemployment in the high-tech industry in sales andmanagement.

    Supplementing the full-time instructional staff, withranks ranging from instructor through full professor, is acontingent of well-qualified, experienced lecturers whoare recruited from the reserve of talent existing in theIndianapolis area.

    Centers of Research Excellence inthe School of Science

    Assertive Community Treatment Center of Indiana

    Center for Biocomputing

    Center for Earth and Environmental Science (CEES)

    Center for Mathematical Biosciences

    Center for Membrane Biosciences

    Center for Nuclear Magnetic Resonance

    Center for Regenerative Biology and Medicine

    Center for Visual Information Sensing andComputing

    Nanoscale Imaging Center

    Degree and Certificate ProgramsDegree Programs in the School of Science

    The School of Science at Indiana UniversityPurdueUniversity Indianapolis awards students degrees fromboth Purdue University (PU) and Indiana University (IU).This list shows all the degrees awarded and the institutiongranting the degree.

    Biology

    Bachelor of Arts - PU

    Bachelor of Science - PU

    Master of Science - PU

    Doctor of Philosophy1 - PU

    Biotechnology

    Bachelor of Science - PU

    Chemistry

    Bachelor of Arts - PU

    Bachelor of Science - PU

    Master of Science - PU

    Doctor of Philosophy1,2 - PU

    Computer and Information Science

    Bachelor of Science - PU

    Master of Science - PU

    Doctor of Philosophy1 - PU

    Environmental Science

    Bachelor of Science - IU

    Forensic and Investigative Sciences

    Bachelor of Science - PU

    Master of Science - PU

    Geology

    Bachelor of Arts - IU

    Bachelor of Science - IU

    Master of Science - IU

    Interdisciplinary Studies

    Bachelor of Science - PU

    Mathematical Sciences

    Bachelor of Science - PU

    Master of Science - PU Pure/Applied Math

    Applied Statistics

    Math Education

    Doctor of Philosophy (Mathematics)1 - PU

    Doctor of Philosophy (Biostatistics)3 - IU

    Physics

    Bachelor of Science - PU

    Bachelor of Science (Physics) / Bachelor ofScience (Electrical Engineering) dual degreeprogram - PU

    Bachelor of Science (Physics) / Master ofScience (Mechanical Engineering) dual degreeprogram - PU

    Master of Science - PU Doctor of Philosophy1,2 - PU

    Psychology

    Bachelor of Arts - PU

    Bachelor of Science - PU

    Master of Science - PU Industrial/Organizational (I/O) Psychology

    Clinical Rehabilitation Psychology

    Doctor of Philosophy in Clinical RehabilitationPsychology - PU

    Doctor of Philosophy1 - PU

    Several departments participate in the joint M.D.-Ph.D.program with the Indiana University School of Medicine.In this program students concurrently earn an IndianaUniversity Doctor of Medicine degree and a Ph.D. degreein the School of Science.1,2

    1. Purdue University Ph.D. Programs, pursued atIUPUI, arranged through Purdue, West Lafayette.

    2. Indiana University Ph.D. Programs, pursued atIUPUI, in departments or programs of the IndianaUniversity School of Medicine in which School ofScience faculty hold adjunct appointments.

    3. Indiana University Ph.D. program, pursued at IUPUI,in collaboration with the Division of Biostatistics inthe IU School of Medicine.

    Certificate Programs in the School of Science (PU)

    The School of Science at Indiana UniversityPurdueUniversity Indianapolis also awards Purdue University(PU) certificates.

    Computer and Information Science

    Undergradate

    Certificate in Applied Computer Science

    Graduate

    Certificate in Biocomputing

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    May 26, 2010 Admission 3

    Certificate in Biometrics

    Certificate in Computer Security

    Certificate in Databases and Data Mining

    Certificate in Software Engineering

    Bulletin Designation and ProgramPlanningBulletin Designation

    All colleges and universities establish certain academicrequirements that must be met before a degree is granted.These regulations concern such things as curricula andcourses, majors and minors, and campus residence.Advisors, directors, and deans will aid students in meetingthese requirements, but students are responsible forfulfilling them. At the end of the course of study, thefaculty and the Board of Trustees vote on the conferring ofdegrees. If requirements have not been satisfied, degreeswill be withheld pending satisfactory completion of theserequirements. For this reason, students need to acquaintthemselves with all regulations and to remain informedthroughout their university career.

    This bulletin lists the requirements and regulationsin effect for students who are admitted to the Schoolof Science in August 2010 (Fall semester). Studentswho enter after this date may be subject to differentrequirements; students who entered before August 2010may elect to follow the graduation requirements that werein effect at the time of their admission to their degreeprogram or the graduation requirements that becameeffective thereafter. However, the requirements chosenmust be from only one bulletin. If a student has notcompleted a bachelors degree program within eight yearsof admission, the student may be obliged by the majordepartment to meet the requirements of a subsequentbulletin. Additionally, students in good standing whohave not been enrolled at the university for two or moreconsecutive years must satisfy the requirements of the

    School of Science bulletin in effect upon their return.Program Planning and Advising GuidelinesThe experience of academic advisors and of successfulstudents suggests the following guidelines for effectiveplanning of undergraduate programs:

    Students should be thoroughly familiar with allacademic requirements that must be met before adegree is granted.

    Students should seek appointments with academicadvisors in their major departments before thedates established by the university calendar forregistration. In such conferences students should, asa minimum objective, make certain that they reviewtheir degree requirements and that they have madean appropriate plan for the next semester.

    Each student should understand that theresponsibility for determining an appropriateacademic program and for meeting every degreerequirement rests with the student; faculty or staffmembers acting in the capacity of advisors areobligated only to assist students in meeting thisresponsibility. Any student who needs clarificationof any of the requirements for the degree programis urged to obtain this clarification from an academicadvisor or from the School of Science, ScienceBuilding, Room 222, phone (317) 274-0625.

    Contact InformationThe School of ScienceIUPUIScience Building, LD 222402 N. Blackford StreetIndianapolis, IN 46202-3276

    Phone: (317) 274-0625Fax: (317) 274-0628

    E-mail: [email protected]

    Contacts for Academic/Student Services

    Marcy K. CarlsonPre-Professional AdvisorE-mail: [email protected]

    Kathleen A. MarrsAssociate DeanAcademic AffairsE-mail: [email protected]

    James M. MurphyAssociate DeanResearch and Graduate Education

    E-mail:[email protected]

    Melissa L. PohlmanDirector of Student ServicesE-mail: [email protected]

    Florence L. RogersDirector of Admissions ProcessingE-mail: [email protected]

    Joseph L. ThompsonExecutive Director of Academic AffairsE-mail:[email protected]

    Jeffrey X. WattAssociate DeanStudent Affairs and OutreachE-mail:[email protected] [dot] edu

    AdmissionAll students entering the School of Science must havebeen officially admitted to the university by the IUPUIUndergraduate Admissions Center, Campus Center,Room 255, 420 University Blvd., Indianapolis, IN 46202.Further information and application forms may be obtainedat this address, by calling (317) 274-4591, or on the Webat www.enroll.iupui.edu.

    Applicants should be aware that, under Indiana law,criminal convictions might result in ineligibility foradmission to certain programs at IUPUI. For the School of

    Science, criminal convictions may also result in ineligibilityfor enrollment in certain courses or participation in certainprojects. Questions regarding school policy on suchmatters should be addressed to the associate dean forFaculty Affairs and Undergraduate Education.

    International StudentsInternational students seeking admission to the Schoolof Science at IUPUI must submit the internationalapplication for admission, which is available onlinefrom the IUPUI Office of International Affairs atwww.international.iupui.edu. Additional information can beobtained at IUPUI Office of International Affairs, 902 W.

    http://www.international.iupui.edu/http://www.enroll.iupui.edu/mailto:[email protected]%20[dot]%20edumailto:[email protected]:[email protected]:[email protected]:[email protected]:[email protected]:[email protected]:[email protected]
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    4 Undergraduate Requirements May 26, 2010

    New York St., ES 2126 46202; phone (317) 274-7000; fax(317) 278-2213; email: @..

    Undergraduate RequirementsBeginning Students

    Students entering IUPUI directly from high school shouldfile their applications for admission early in their senioryear.

    Acceptance to the university as a new student isinfluenced by several factors. The UndergraduateAdmissions Center is guided by the following:

    The applicant should be a high school graduate orbe scheduled to graduate before enrolling at IUPUI.

    The extent to which the student meets or exceedsthe minimum subject requirements indicated below isconsidered. For admission to the School of Science,the students record should include the followingcourse work:

    Subjects Semesters

    English 8

    History and Social Science 6Algebra 4

    Geometry 2

    Trigonometry 1-2

    Laboratory Science 6 (includingchemistryand biology)

    Combination of foreign language,additional mathematics, laboratoryscience, social science, orcomputer science courses

    6-7

    Applicants to the School of Science are stronglyencouraged to complete AP science and mathematics

    courses if available at their high school. Applicantsconsidering majors in physics or chemistry areencouraged to complete a calculus course in high school.

    In planning high school electives, the curricula of thevarious departments of the School of Science containedin this bulletin should be reviewed. Departmental advisorswill be glad to help with planning for admission.

    All applicants are required to take the ScholasticAptitude Test (SAT) or the American College Test(ACT). IUPUI requires that the writing section of thetest also be completed. It is recommended that thesetests be taken in the spring of the junior year in highschool or fall of the senior year.

    The Undergraduate Admissions Center will examine yourhigh school transcript and standardized test scores todetermine both your admission to the university and youracceptance to the School of Science.

    Students should declare a major when applying foradmission so a departmental advisor can be assigned.

    Transfer StudentsFrom IUPUI Schools, Indiana University Campuses,

    and Purdue University Campuses

    Prospective transfer students should have a minimumgrade point average of 2.0 on a 4.0 scale, meet therequirements of the department they wish to enter, andbe in good disciplinary standing. In order to be acceptedfor admission to the School of Science, students must firstprovide the materials indicated below.

    An IUPUI or other Indiana University campus studentshould file a record change form, which may beobtained from the School of Science or the studentscurrent school. The form is also available online atwww.enroll.iupui.edu.

    A Purdue University campus student must make anofficial application through the IUPUI UndergraduateAdmissions Center at www.enroll.iupui.edu.

    From Other Colleges and Universities

    Students who have earned transfer credit for 12 credithours and have a minimum cumulative grade pointaverage of 2.0 on a 4.0 scale from other institutions may

    be considered for admission to the School of Science.Admittance to the school is contingent upon acceptanceinto a departmental program. Students should submit thefollowing with their application for admission to the IUPUIUndergraduate Admissions Center:

    a copy of their high school record showingsatisfactory completion of entrance requirements;students with less than 26 hours of transfer workmust present SAT or ACT scores.

    an official transcript of work completed in eachinstitution previously attended

    evidence of good academic and disciplinary standingat the institution last attended

    The Undergraduate Admissions Center evaluates creditfrom other institutions, and the major department andthe School of Science determine its applicability towarddegree requirements in the School of Science.

    A marginal applicant may be granted admission, admittedon probation, or have admission denied.

    Transfer Credit

    The students major department and the School ofScience determine acceptability of transfer credits fromanother college or university to the School of Science.

    From IUPUI to Other Indiana University and Purdue

    University Campuses

    Students transferring from IUPUI to other IndianaUniversity and Purdue University campuses shouldconsult the appropriate departments at those campusesabout equivalence of courses.

    Graduate RequirementsTo be considered for admission, a candidate must havea bachelors degree from an accredited institution andmust show promise of ability to engage in advancedwork and evidence of adequate preparation to pursuegraduate study in the field chosen. The minimum standardfor unconditional admission to the graduate schoolis a graduation grade point average of 3.0 (B) or the

    http://enroll.iupui.edu/admissions/mailto:@.
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    May 26, 2010 Courses 5

    equivalent. An applicant not meeting these requirementsshould take the aptitude tests section of the GraduateRecord Examination (GRE). Individual departments mayset higher grade point requirements and may requirethe submission of additional evidence of academicperformance, such as GRE scores.

    A minimal score of 550 on the Test of English as a ForeignLanguage (TOEFL) paper version/PBT or a minimal

    score of 213 on the TOEFL computer-based version/CBT is required for admission to the graduate schoolfor applicants whose native language is not English.Departments may set higher requirements. Applicants inthe Indianapolis area may substitute the IUPUI Englishas a Second Language (ESL) Placement Examinationfor the TOEFL. Information about this test is availablefrom the Office of International Affairs online at http://international.iupui.edu/.

    Application should normally be made at least six monthsbefore the beginning of the session in which the studentwishes to enroll. However, please refer to the specificacademic program for admission deadlines. Lateapplications may also be accepted. Applicants will beadvised of the action taken on their applications bythe Dean of the Purdue University Graduate School.Applications to the Department of Earth Sciences will beconsidered by the Department of Earth Sciences andforwarded to the IUPUI office of the Indiana UniversityGraduate School; applicants will be notified of the resultsby the graduate advisor in the Department of EarthSciences.

    Qualified students may be authorized to pursue a Ph.D.degree at IUPUI in areas where a program has beenarranged with Purdue, West Lafayette, or the IndianaUniversity School of Medicine. For further details, contactthe department in which study is desired.

    Applicants should be aware that, under Indiana law,

    criminal convictions might result in ineligibility foradmission to certain programs at IUPUI. For the School ofScience, criminal convictions may also result in ineligibilityfor enrollment in certain courses or participation in certainprojects. Questions regarding school policy on suchmatters should be addressed to the Associate Dean forFaculty Affairs and Undergraduate Education.

    Financial support in the form of teaching and researchassistantships is available through the departmentsof the School of Science. Students who want to beconsidered for IUPUI fellowships must submit GRE(verbal/quantitative/analytic) scores. Area examinationscores may be submitted for consideration.

    Degree-Seeking Graduate Student Application

    Application to all graduate programs must be made byelectronic applications accessible through the School ofScience Web site (www.science.iupui.edu). Applicationfees are submitted online at the time of application. Ifnecessary, paper applications may be obtained from eachdepartment.

    Applicants must submit complete, official transcripts ofall previous college and university studies and threeletters of academic reference for evaluation by the majordepartment.

    Non Degree StudentsUndergraduate Nondegree Program

    Students who hold a bachelor's degree from IUPUIor another university may register at IUPUI asUndergraduate Nondegree students. This enrollmentstatus is desirable for students who need to take a smallnumber of undergraduate courses in order to apply formedical school or other professional programs in, forexample, dentistry, occupational therapy, optometry,pharmacy, physical therapy, and veterinary medicine.Students enrolled as undergraduate nondegree payundergraduate tuition and fees, but may only register forundergraduate courses.

    Undergraduate nondegree students who enroll in graduatecourses may be administratively withdrawn from thesecourses and may forfeit tuition and associated fees.Undergraduate nondegree students may seek academicadvising through the School of Science. Students enrolledas undergraduate nondegree are eligible for Stafford loansonly, provided they have not used up their undergraduatefinancial aid eligibility. They may also seek loans orsupport through banks or other financial institutions.

    Students enrolled as undergraduate nondegree are noteligible for other forms of financial aid through IUPUI.

    Graduate Nondegree Program

    Students normally use the graduate nondegreeclassification whose intent is to take course work forpersonal improvement. A student who wishes to becomea candidate for an advanced degree should consult withthe chosen major department at the time of applicationfor admission as a graduate nondegree student. Themajor department will advise applicants of the procedurefor obtaining status as a degree-seeking student. Anapplication to become a graduate nondegree studentis obtained through the IUPUI Graduate Office at the

    following Web site: http://www.iupui.edu/~gradoff/gnd/.Additional information can be obtained at the IUPUIGraduate Office, Union Building, Room UN-207, 620Union Drive, Indianapolis, IN 46202-5167; telephone (317)274-1577.

    No more than 12 hours of credit earned under thisclassification may be used on a plan of study for a PurdueUniversity degree program without approval of the majordepartment and the Purdue University Graduate School.Similarly, not more than 9 hours of credit earned underthis classification may be used in a plan of study for anIndiana University degree program without approval of themajor department.

    CoursesAstronomyASTA 100 The Solar System (3 cr.)Fall. Survey of the solar system, including the Earth,sun, moon, eclipses, planets and their satellites, comets,laws of planetary motion, etc. Discussion of the originof the solar system, life on earth, and the possibilities ofextraterrestrial life. Also astronomical instruments andcelestial coordinates.

    ASTA 105 Stars and Galaxies (3 cr.)

    http://www.science.iupui.edu/http://www.iupui.edu/~oiahttp://www.iupui.edu/~gradoff/grdhttp://www.science.iupui.edu/http://www.iupui.edu/~oiahttp://www.iupui.edu/~oia
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    6 Courses May 26, 2010

    Spring. Survey of the universe beyond the solar system,including stars, pulsars, black holes, principles ofspectroscopy and the H-R diagram, nebulae, the MilkyWay, other galaxies, quasars, expanding universe,cosmology, and extraterrestrial life.

    ASTA 130 Short Courses in Astronomy (1 cr.)Five-week short courses on a variety of topics inastronomy. Examples of topics include: the Big Bang,

    Black Holes, Astronomy from your Backyard, How to SeeStars, and The Birth and Death of Our Sun.

    Biology

    Advanced Undergraduate and Graduate LevelBIOL 50700 Principles of Molecular Biology (3 cr.)P: K322, CHEM C342, or consent of instructor. Fall, night.Molecular aspects of structure and function of nucleicacids and proteins, including recombinant DNA research.Prokaryotic and eukaryotic molecular biology are givenequal weight.

    BIOL 51600 Molecular Biology of Cancer (3 cr.)P: CHEM C342 and K322 or a course in biochemistry.

    A detailed course examining the molecular mechanismscontrolling the growth of animal cells. Emphasis on currentexperimental approaches to defining the molecular basisof growth regulation in developing systems and theuncontrolled proliferation of cells in metabolic disorders,such as cancer.

    BIOL 53000 Introductory Virology (3 cr.)P: K356, CHEM C342. Fall, odd years, night. Detection,titration, and chemistry of viruses; viral host interactions:bacteriophage-bacterium, animal virus-animal cell,plant virus-plant cell; tumor viruses: infection andtransformation.

    BIOL 54000 Topics in Biotechnology (3 cr.)P: K322 and CHEM C341, or consent of instructor. Fall,night. Examines research techniques and applicationsfor several technologies situated at currently recognizedbiological frontiers, including recombinant DNAtechnology, hybridoma technology, protein engineering,agricultural research, and microbiological engineering.

    BIOL 54800 Techniques in Biotechnology (3 cr.)P: K322, CHEM C342, or consent of instructor. Fall, day,night. Laboratory experience in techniques applicable tobiotechnology: protein chemistry, molecular biology, andimmunology.

    BIOL 55000 Plant Molecular Biology (3 cr.)

    P: K322, CHEM C341, or consent of instructor. Fall, day,night. A comprehensive study of plant molecular biologyand plant molecular genetics. Topics will include thestructure and expression of plant nuclear, chloroplast, andmitochondrial genomes, and plant viruses.

    BIOL 55600 Physiology I (3 cr.)P: K10300, CHEM C342. Fall, night. Principles ofphysiology: nerve and muscle, temperature regulation, ionand water balance.

    BIOL 55700 Physiology II (3 cr.)

    P: 556 or consent of instructor. Spring, night. A studyof human cardiovascular, pulmonary, blood, andgastrointestinal systems. Higher neuronal functions andintersystem interactions will be discussed.

    BIOL 55900 Endocrinology (3 cr.)P: 556 or equivalent, and CHEM C342. Fall. The studyof hormone function. Consideration will be given to therole of hormones in growth, development, metabolism,

    homeostasis, and reproduction.

    BIOL 56100 Immunology (3 cr.)P: K103, CHEM C341. Spring, night. Introduction to basicprinciples and experimentation in cellular and humoralimmunology.

    BIOL 56400 Molecular Genetics of Development (3 cr.)P: K322 or similar or consent of instructor. R: BIOL 566.Spring, day, night. Examines how key regulatory genesand molecular signaling pathways regulate developmentin both lower eukaryotic organisms and mammalian organsystems, with emphasis on the function and evolution ofsignaling molecules and transcription factor superfamilies.

    BIOL 56600 Developmental Biology (3 cr.)P: K322. Fall. Principles of animal development. Theemphasis is on concepts and underlying mechanismsof developing and regenerating systems and stemcell properties, including molecular and biochemicalapproaches.

    BIOL 56800 Regenerative Biology and Medicine (3 cr.)P: K324 or K331 or a biochemistry course. Spring. Thiscourse examines the mechanisms of natural regeneration(regenerative biology) and the application of thesemechanisms to the development of therapies to restoretissues damaged by injury or disease (regenerativemedicine).

    BIOL 57000 Biological Membranes (3 cr.)P: CHEM C342 or consent of instructor. Spring, night.An examination of structure and function of biologicalmembranes. Topics include lipid and protein compositionand interactions, physiological properties of membranes,physiological methods of analysis, model membranesystems, and survey of specific biological membranes andtheir modes of action.

    BIOL 57100 Developmental Neurobiology (3 cr.)P: consent of instructor. Fall, odd years, night. The majorphases of nervous system development beginning withneurolation and neurogenesis and ending with the onset of

    physiological activity will be studied in a variety of animals,mainly avians and mammals (including man). Neuraldevelopmental disorders and behavioral ontogeny will alsobe considered.

    BIOL 59500 Special Assignments (1-3 cr.)P: consent of instructor. Fall, Spring, Summer. Specialwork, such as directed reading, independent study orresearch, supervised library, laboratory or fieldwork, orpresentation of material not available in the formal coursesof the department.

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    May 26, 2010 Courses 7

    Courses for the NonmajorBIOLN 100 Contemporary Biology (3 cr.)Fall, day, night; Spring, day, night; Summer. Selectedprinciples of biology with emphasis on issues andproblems extending into everyday affairs of the student.

    BIOLN 107 Exploring the World of Animals (4 cr.)Equiv. PU BIOL 109. Fall, day, night; Spring, day, night;Summer, day. This course introduces students to animalsand their native environments. It surveys individualecosystems and highlights the interactions, features, andcharacteristics of the animals found there. Examples ofdiscussion topics include unique features of animals,animal relationships, societies and populations, exoticspecies, and behavior, including mating, communication,feeding and foraging, and migration. Environmental issuesincluding the effects of pollution on ecosystems are alsodiscussed. Not equivalent to K103.

    BIOLN 108 Plants, Animals and the Environment(3 cr.)Fall, day, night; Spring, day, night; Summer, day. Thiscourse is designed to provide students and future K-8

    teachers with a background in the general biologyconcepts of plants, animals and the environment,which are the backbone of the State of Indiana sciencestandards.

    BIOLN 200 The Biology of Women (3 cr.)Fall, day, night; Spring, day, night; Summer. This courseexamines the biological basis for bodily functions andchanges that take place throughout the life of females.

    BIOLN 212 Human Biology (3 cr.)Equiv. PU BIOL 201. Fall, day. First course in a two-semester sequence in human biology with emphasis onanatomy and physiology, providing a solid foundation inbody structure and function.

    BIOLN 213 Human Biology Laboratory (1 cr.)P or C: N212. Fall, day. Accompanying laboratory forN212.

    BIOLN 214 Human Biology (3 cr.)P: N212. Equiv. PU BIOL 202. Spring, day. Continuationof N212.

    BIOLN 215 Human Biology Laboratory (1 cr.)P or C: N214. Spring, day. Accompanying laboratory forN214.

    BIOLN 217 Human Physiology (5 cr.)

    Equiv. IU PHSL P215. Fall, day; Spring, day; Summer,day. Lectures and laboratory work related to cellular,musculoskeletal, neural, cardiovascular, gastrointestinal,renal, endocrine, and reproductive function in humans.

    BIOLN 222 Special Topics in Biology (1-3 cr.)A variable-topic course dealing with current topics inbiology. In a given semester, a topic such as disease,genetics, the environment, etc., will be dealt with as aseparate course.

    BIOLN 251 Introduction to Microbiology (3 cr.)

    P: one semester general chemistry or one semester lifescience. Spring, night. This course includes a laboratorycomponent. The isolation, growth, structure, functioning,heredity, identification, classification, and ecology ofmicroorganisms; their role in nature and significance tohumans.

    BIOLN 261 Human Anatomy (5 cr.)Equiv. IU ANAT A215. Fall, day, night; Spring, day, night;

    Summer, day, night. Lecture and laboratory studies ofthe histology and gross morphology of the human form,utilizing a cell-tissue-organ system-body approach.

    BIOLN 322 Introductory Principles of Genetics (3 cr.)P: N107 or K101. Equiv. PU AGR 430. Spring, night.Basic principles of plant and animal genetics. Emphasison transmission mechanisms as applied to individualsand populations. For students in health and agriculturalsciences.

    BIOLN 400 Biological Skills for Teachers (3 cr.)P: consent of instructor. Fall, night. Concepts andlaboratory skills necessary to prepare teachers with

    diverse backgrounds to return to graduate academicbiology courses are reviewed. Topics include generalprinciples of biology, biochemistry, and biomathematics.

    Graduate LevelBIOL 64100 Microbial Genetics (2 cr.)P: K323, CHEM C342, and consent of instructor. Spring,odd years, night. Genetics of bacteria, bacterial viruses,and other microorganisms with emphasis on organization,replication, and function of the genetic material.

    BIOL 69600 Seminar (1 cr.)Fall, Spring. Each semester there are several separateofferings. They will likely be on the following topics:biochemistry, biology teaching, ecology and populationbiology, genetics, mechanisms of development,microbiology, neurobiology, and plant physiology. Oralpresentations required. May be repeated for credit.

    BIOL 69700 Special Topics (1-3 cr.)Fall, Spring. The frontiers of biology. Critical examinationof developments in the various specialties representedby the members of the department. Currently, advancedwork in the following and related fields can be offered:molecular genetics; structure and biosynthesis ofbiologically significant molecules; the nature of biologicalspecificity and enzyme catalysis; the fine structure andchemistry of subcellular particles, cells, and tissues;microbial and plant metabolism; comparative biochemistry;

    genetics and physiology of viruses, bacteria, fungi,protozoa, helminths, and cells of higher forms of life;the genetics, structure, development, and physiology ofplants and animals, including endocrinology and workphysiology; excitable membranes; neurobiology, ecology,systematics, and evolution of microorganisms, plants, andanimals; host-parasite relationships including immunology;and the teaching of biology. The field in which work isoffered will be indicated in the student's record. May berepeated for credit.

    BIOL 69800 Research M.S. Thesis (Arr. cr.)

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    M.S. Thesis

    BIOL 69900 Research Ph.D. Thesis (Arr cr.)Research Ph.D. Thesis

    Undergraduate LevelBIOLK 101 Concepts of Biology I (5 cr.)P: high school or college chemistry. Fall, day; Spring, day,night; Summer, day. An introductory course emphasizingthe principles of cellular biology; molecular biology;genetics; and plant anatomy, diversity, development, andphysiology.

    BIOLK 103 Concepts of Biology II (5 cr.)P: K101. Fall, day, night; Spring, day; Summer, day.An introductory biology course emphasizing phylogeny,structure, physiology, development, diversity, evolutionand behavior in animals.

    BIOLK 295 Special Assignments (Arr cr.)P: consent of instructor. Fall, Spring. Special work,such as directed readings, laboratory or fieldwork, orpresentation of material not available in the formal courses

    in the department.

    BIOLK 322 Genetics and Molecular Biology (3 cr.)P: K103 and CHEM C106. Fall, day. Spring of even-numbered years. The course covers the principles ofclassical and molecular genetics including Mendelianinheritance, linkage, nucleic acids, gene expression,recombinant DNA, genomics, immunogenetics, andregulation.

    BIOLK 323 Genetics and Molecular BiologyLaboratory (2 cr.)P or C: K322. Fall, day. Applied principles of geneticsand molecular biology using organisms of increasing

    complexity from viruses to fruit fly. Laboratory experimentsinclude linkage analyses, deletion mapping, isolation ofhuman chromosomes, mutagenesis, DNA extraction,restriction enzyme analysis, and PCR.

    BIOLK 324 Cell Biology (3 cr.)P: K103 and CHEM C106. Spring, day. Examination of thestructure and activity of eukaryotic cells and subcellularstructures. Emphasis is on regulation of and interactionsamong subcellular events, such as protein targeting,transmembrane signaling, cell movement, and cell cycle.

    BIOLK 325 Cell Biology Laboratory (2 cr.)P or C: K324. Spring, day. Experiments on the molecularand biochemical basis of organization and function of

    eukaryotic cells.

    BIOLK 331 Embryology (3 cr.)P: K103. Fall, Spring, day. The development of animalsthrough differentiation of cells, tissues, organs, and organsystems will be examined.

    BIOLK 333 Embryology Laboratory (1 cr.)P or C: K331. Spring, day. Processes of animaldevelopment are examined in a series of classical and

    modern experiments using cell, tissue and embryo culture,drug treatments, and microscopic techniques.

    BIOLK 338 Introductory Immunology (3 cr.)P: K103 and CHEM C106. Fall, day, night. Principlesof basic immunology with an emphasis on the cells andmolecules underlying immunological mechanisms.

    BIOLK 339 Immunology Laboratory (2 cr.)P or C: K338. Fall, day, night. Demonstration ofimmunological principles by experimentation. Exercisesinclude cells and factors of the innate and the adaptiveimmune systems.

    BIOLK 341 Principles of Ecology and Evolution (3 cr.)P: K103. Fall, day. A study of the interactions of organismswith one another and with their nonbiotic environments inlight of evolution.

    BIOLK 342 Principles of Ecology and EvolutionLaboratory (2 cr.)P or C: K341. Fall, day. Application of ecology andevolution principles in laboratory and field experiments as

    well as demonstration of techniques of general ecology.

    BIOLK 350 Comparative Animal Physiology (3 cr.)P: N107 or K103, CHEM C106. Spring, day. Acomparative examination of principles of animalphysiology from molecular to organismal levels usinghomeostasis, regulation, and adaptation as centralthemes.

    BIOLK 356 Microbiology (3 cr.)P: K103, CHEM C341. Spring, day, night. Introductionto microorganisms: cytology, nutrition, physiology, andgenetics. Importance of microorganisms in applied fieldsincluding infectious disease.

    BIOLK 357 Microbiology Laboratory (2 cr.)P or C: K356. Spring, day. Laboratory experimentsand demonstrations to yield proficiency in asepticcultivation and utilization of microorganisms; experimentalinvestigations of biological principles in relation tomicroorganisms.

    BIOLK 411 Global Change Biology (3 cr.)P: K101 and K103 or GEOL G109 and one course inchemistry or consent of instructor. Examination of changesin earth's environment over history. In-depth study ofeffects of environmental change, including global warming,on the ecology of various organisms.

    BIOLK 483 Biological Chemistry (3 cr.)P: CHEM C342. Fall, day. Chemistry of biologicallyimportant molecules including carbohydrates, lipids,proteins, and nucleic acids. Special emphasis onchemistry of intermediary metabolism.

    BIOLK 484 Cellular Biochemistry (3 cr.)P: CHEM C342. Spring, day, night. Emphasis onselected topics in cellular biochemistry, including nucleicacid: protein interactions, protein: protein interactions,protein synthesis, biogenesis of membranes, and signal

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    transduction. Current techniques for studying theseprocesses in higher eukaryotes will be discussed.

    BIOLK 490 Capstone (1 cr.)P: senior standing. Faculty-directed or approvedindependent library research on an area of public,scientific interest or a community service activity in localindustry, government, schools, or other public science-related groups or organizations. Topics for independent

    research and a list of service opportunities are available inthe Department of Biology Office.

    BIOLK 493 Independent Research (1-3 cr.)P: consent of instructor. Fall, Spring, Summer. A coursedesigned to give undergraduate students majoring inbiology an opportunity to do research in fields in whichthey have a special interest.

    BIOLK 494 Senior Research Thesis (1 cr.)P: K493. Fall, Spring, Summer. A formally written reportdescribing the results or accomplishments of K493.

    Biostatistics

    BIOSS 515 Biostatistical Practicum (1-3 cr.)P: STAT 521; BIOS S527, S546; or consent of instructor.Real-world projects in biostatistics involving participationin consulting sessions, directed reading in the literature,research ethics, design of experiments, collection ofdata and applications of biostatistical methods. Detailedwritten and oral reports required. May be repeated, up to 6credits.

    BIOSS 527 Introduction to Clinical Trials (3 cr.)P: STAT 512, exposure to survival analysis; or consentof instructor. Prepares biostatisticians for support ofclinical trial projects. Topics: fundamental aspects of theappropriate design and conduct of medical experimentsinvolving human subjects including ethics, design, samplesize calculation, randomization, monitoring, data collectionanalysis and reporting of the results.

    BIOSS 530 Statistical Methods in Bioinformatics(pending approval) (3 cr.)P: STAT 512, 519; or consent of instructor. Covers abroad range of statistical methods used in many areas ofbioinformatics research, including sequence alignment,genome sequencing and gene finding, gene expressionmicroarray analysis, transcriptional regulation andsequence motif finding, comparative genomics, andproteomics.

    BIOSS 531 Sequence Analysis (pending approval)

    (3 cr.)P: BIOS S530. Project-based course to train students'skills in sequence analyses and communications; projectswill cover pairwise alignment; multiple alignment, evolutionand phylogeny, and cis-regulatory analysis.

    BIOSS 546 Applied Longitudinal Data Analysis (3 cr.)P: STAT 512, 525; or permission of instructor. Coversmodern methods for the analysis of repeated measures,correlated outcomes and longitudinal data. Topics:repeated measures ANOVA, random effects and growthcurve models, generalized estimating equations (GEE)

    and generalized linear mixed models (GLMMs). Extensiveuse of statistical software, e.g. SAS, R.

    BIOSS 598 Topics in Biostatistical Methods (1-3 cr.)P: Consent of advisor. Directed study and reports forstudents who wish to undertake individual reading andstudy on approved topics.

    BIOSS 621 Advanced Statistical Computing (pendingapproval) (3 cr.)P: STAT 521, 525, 528. A study of computing methodscommonly used in statistics. Topics include computerarithmetic, matrix algebra, numerical optimizationmethods with application to maximum likelihoodestimation and GEEs, spline smoothing and penalizedlikelihood, numerical integration, random numbergeneration and simulation methods, Gibbs sampling,bootstrap methods, missing data problems and EM,imputation, data augmentation algorithms, and Fouriertransforms. Students should be proficient with effectiveimplementation of numerical algorithms in one ofcommonly used computer languages (C, Fortran, S, R orsimilar).

    BIOSS 627 Statistics in Pharmaceutical Research(3 cr.)P: STAT 512; BIOS S527, S546. An overview of the drugdevelopment process, including the various phases ofdevelopment from pre-clinical to post-marketing. Topics:statistical issues in design, study monitoring, analysis andreporting. Additional topics may include regulatory andstatistical aspects of population pharmacokinetics and realworld applications.

    BIOSS 634 Stochastic Modeling in Biomedical andHealth Sciences (pending approval) (3 cr.)P: STAT 528. The aim of this course is to develop thoseaspects of stochastic processes that are relevant for

    modeling important problems in health sciences. Amongthe topics to be covered are: Poisson processes, birth anddeath processes, Markov chains and processes, semi-Markov processes, modeling by stochastic diffusions.Applications will be made to models of prevalence andincidence of disease, therapeutic clinical trials, clinicaltrials for prevention of disease, length biased sampling,models for early detection of disease, cell kinetics andfamily history problems.

    BIOSS 636 Advanced Survival Analysis (pendingapproval) (3 cr.)P: STAT 628. Discusses the theoretical basis of conceptsand methodologies associated with survival data andcensoring, nonparametric tests, and competing riskmodels. Much of the theory is developed using countingprocesses and martingale methods. Material is drawn fromrecent literature.

    BIOSS 646 Advanced Longitudinal Data Analysis(pending approval) (3 cr.)P: BIOS S546. Presents classical and modern approachesto the analysis of multivariate observations, repeatedmeasures, and longitudinal data. Topics include themultivariate normal distribution, Hotelling's T2, MANOVA,the multivariate linear model, random effects and growthcurve models, generalized estimating equations, statistical

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    analysis of multivariate categorical outcomes, andestimation with missing data. Discusses computationalissues for both traditional and new methodologies.

    Chemistry

    GraduateCHEM 53300 Introductory Biochemistry (3 cr.)P: C342 or equivalent. A rigorous one-semesterintroduction to biochemistry.

    CHEM 54200 Inorganic Chemistry (3 cr.)P: C362 or equivalent or consent of instructor. Atomicstructure; periodic trends and properties of the elements.Introduction to symmetry and group theory. Valence bond,molecular orbital, and ligand field theories of bonding andtheir application to structure and properties of inorganicand organometallic compounds. Spectroscopic propertiesand acid-base, oxidation-reduction, and coordinationreactions of inorganic compounds. Advanced topics inmain group or transition element chemistry.

    CHEM 57500 Intermediate Physical Chemistry (3 cr.)P: C362 or equivalent. Quantum theory of atoms and

    molecules, theories of chemical bonding, molecularspectroscopy, methods for determining molecularstructure, and electrical and magnetic properties.

    CHEM 59900 Special Assignments (1-4 cr.)P: consent of instructor. Every semester including summerI and II, time arranged. Directed reading or special worknot included in other courses.

    CHEM 62100 Advanced Analytical Chemistry (3 cr.)P: C311 and C410. A critical survey of recentdevelopments in chemical and instrumental methods ofanalysis.

    CHEM 62900 Chromatographic Methods of Analysis(3 cr.)P: C410 or equivalent or consent of instructor. Principlesand practice of modern gas and liquid chromatographyand capillary electrophoresis are developed from anintegrated point of view. Emphasis is placed both ontheory and on features useful for practical analyticalseparations.

    CHEM 63400 Biochemistry: Structural Aspects (3 cr.)P: C311, C342, C361, and C362 or equivalent. Chemistryof materials of biochemical interest: carbohydrates,lipids, proteins, amino acids, nucleic acids, porphyrins,biochemistry of blood.

    CHEM 63600 Biochemical Mechanisms (3 cr.)P: one year of physical chemistry and 651. The chemicalbasis of enzymatic catalysis with particular emphasis oncatalytic interactions important in aqueous media.

    CHEM 64100 Advanced Inorganic Chemistry (3 cr.)P: C430 or 542 or equivalent or consent of instructor.Applications of symmetry and group theory to structure,bonding and spectral properties of inorganic compounds.Advanced topics in main group and transition elementchemistry including determination of structure fromphysical and spectroscopic properties, bonding in

    coordination, and organometallic compounds andinorganic reaction mechanisms.

    CHEM 65100 Advanced Organic Chemistry (3 cr.)P: C342 or equivalent. Modern structural organicchemistry. Introduction to bonding theory, stereochemistry,and computational chemistry.

    CHEM 65200 Synthetic Organic Chemistry (3 cr.)P: 651 or 657. An advanced treatment of methods forpreparing major types of organic functionalities andbonds, stressing stereo chemical and radiochemicalcontrol, and employing mechanistic organic chemistryfor understanding choice of reagents and reactionsconditions.

    CHEM 65700 Reaction Mechanisms (3 cr.)P: C342 or equivalent or consent of instructor. Modernstructural organic chemistry, introduction to physicalorganic chemistry, mechanisms of representativereactions, and methods used for understanding reactivityin organic transformations.

    CHEM 67200 Quantum Chemistry (3 cr.)P: one year of physical chemistry. Basic principlesof classical and quantum mechanics, approximationmethods, atomic structure, spectroscopy, application ofgroup theory, and theory of molecular bonding.

    CHEM 67500 Chemical Kinetics (2-3 cr.)P: one year of physical chemistry. Experimental andtheoretical considerations of chemical reaction rates andmechanisms.

    CHEM 68200 Statistical Thermodynamics (3 cr.)P: C362 or equivalent. Application of statistical mechanicsto the description of imperfect gases, liquids, and

    solutions, to order-disorder phenomena in solids andsurfaces; Monte Carlo techniques and moleculardynamics.

    CHEM 69600 Special Topics in Chemistry: AnalyticalSpectroscopy (1-3 cr.)P: Bachelor of Science in chemistry from an accreditedinstitution or consent of instructor. Survey of moderntechniques, applications of spectroscopy, and imaging inanalytical chemistry.

    CHEM 69600 Special Topics in Chemistry: AppliedComputational Chemistry and Molecular Modeling(1-3 cr.) Applied computational techniques that arewidely used in the chemical and pharmaceutical industry,

    including computational chemistry, molecular modeling,and computer-aided synthesis.

    CHEM 69600 Special Topics in Chemistry:Electroanalytical Chemistry (3 cr.) Principles of modernmethods of electroanalytical chemistry and quantitativeapplications to electrode reaction mechanisms andanalytical determinations.

    CHEM 69600 Special Topics in Chemistry: MedicinalChemistry (1-3 cr.) The application of basic concepts oforganic chemistry, biochemistry, and pharmacology to

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    the design of organic medicinal agents as well as recentadvances in synthesis and evaluation of pharmaceuticals.

    CHEM 69600 Special Topics in Chemistry:Organometallics in Organic Synthesis (1-3 cr.) Recentdevelopments in the use of transition metals in syntheticorganic methodology. Emphasis is placed on applicationsof methods in the synthesis of complex organic molecules.

    CHEM 69600 Special Topics in Chemistry: Protein

    Structure and Function (1-3 cr.) Physical forcesstabilizing protein structure; protein folding. Essentialfeatures of macromolecular interactions. Introduction toenzyme kinetics and chemical mechanism in enzymereactions.

    CHEM 69600 Special Topics in Chemistry: GroupTheory in Chemistry (1-3 cr.) This course is onmolecular symmetry and how we obtain information aboutthe quantum states of molecules through application ofgroup theoretical techniques related to the symmetries ofmolecules.

    CHEM 69600 Special Topics in Chemistry: Solid-PhaseSynthesis and Combinatorial Chemistry: Theory and

    Practice (1-3 cr.) This course will explore how the toolsof solid-phase synthesis and combinatorial chemistry arebeing used to solve a wide variety of problems requiringchemical solutions. Examples range from medicinalchemistry and drug discovery to new catalyst creation,from new "chiral selectors" to new biochemical probes.The course will focus on the rationale for employing acombinatorial approach in chemical discovery. It willteach the basics of solid-phase organic chemistry, andthe methodology, equipment, and analytical technologyemployed to use it as a tool to rapidly and effectively carryout a combinatorial approach to problem solving.

    CHEM 69600 Special Topics In Chemistry:Bioanalytical Chemistry (3 cr.) Modern techniques forthe study of biological macromolecules, such as proteinand peptides, carbohydrates, DNA, RNA, and lipids,including (1) spectroscopy (UV-Vis, Raman, NMR, massspectrometry, and light scattering); (2) bioseparations(chromatography, electrophoresis, and microdialysis);(3) electrochemistry (sensors, electron transfer, andLCEC); and (4) miscellaneous topics (amino acid analysis,sequencing, microcalorimetry, and immunochemistry).

    CHEM 69600 Special Topics in Chemistry:Biochemistry-Dynamic Aspects (1-3 cr.) Mechanisms ofbiological catalysis, metabolism, biosynthesis, regulationof genetic information, and molecular biology.

    CHEM 69600 Special Topics in Chemistry:Bioelectrochemistry (1-3 cr.) Principles of

    electrochemical measurements including potentiometry,amperometry, and linear sweep and cyclic voltammetryand application to the study and utilization of biologicalmolecules. Topics covered include redox transformationsin biological systems, electron transfer between electrodesand biological molecules, and electrochemical sensors fordetection and quantitation of biological analytes.

    CHEM 69600 Special Topics in Chemistry:Bioinorganic Chemistry (1-3 cr.) A study of theoccurrence, properties, and mechanistic roles of transitionand main group elements in biological processes including

    photosynthesis, oxygen evolution, respiration, nitrogenfixation, metabolic detoxification, and electron transfer.

    CHEM 69600 Special Topics in Chemistry: BioorganicChemistry (1-3 cr.) Structure and reactivity of biologicalmacromolecules, such as proteins, enzymes, and nucleicacids, and their relevance to bioorganic chemistry. Currentexperimental studies of enzymes, nucleic acids, andmodel systems.

    CHEM 69600 Special Topics in Chemistry:Biomaterials (1-3 cr.) Introduction to the field ofbiomaterials science including chemistry, physics, andengineering of biomaterials; biological and biochemicalaspects of biomaterials; and biomaterials in medicine.

    CHEM 69600 Special Topics in Chemistry: BiophysicalChemistry (1-3 cr.) The study of structure and propertiesof biologically important macromolecules in solution usingphysical techniques, with special emphasis on optical,fluorescence, and magnetic resonance spectroscopy todescribe protein conformation, denaturation, catalyticcenter structure, thermodynamics of ligand binding, time-dependent processes, and membrane properties.

    CHEM 69600 Special Topics in Chemistry: ChemicalInformation Technology (1-3 cr.) Overview of chemicalinformatics techniques, including chemical information anddata systems, chemical structure and data representationand search systems, and bioinformatics techniques.

    CHEM 69800 Research M.S. Thesis (Arr. cr.)Research M.S. Thesis

    CHEM 69900 Research Ph.D. Thesis (Arr. cr.)Research Ph.D. Thesis

    UndergraduateCHEMC 100 The World of Chemistry (3 cr.)A topically oriented, nonmathematical introduction to

    the nature of matter. Topics covered include fossil fueland nuclear sources of power; environmental issuesinvolving chemistry such as recycling, acid rain, air andwater pollution, global warming, ozone depletion; geneticmodification of foods, DNA profiling, use of food additivesand herbal supplements; and other public policy issuesinvolving science.

    CHEMC 101 Elementary Chemistry I (3 cr.)P: at least one semester of high school algebra. Usuallytaken concurrently with C121. Fall, day, night; Spring, day,night; Summer II, day. Essential principles of chemistry,atomic and molecular structure, bonding, properties andreactions of elements and compounds, stoichiometry,solutions, and acids and bases. For students who are not

    planning careers in the sciences and for those with noprevious course work in chemistry. Note: most degreeprograms that include C101 require the concurrentlaboratory, C121.

    CHEMC 105 Principles of Chemistry I (3 cr.)P: two years of high school algebra and one year of highschool chemistry. Fall, day, night; Spring, day; Summer I,day. Usually taken concurrently with C125. A placementexamination may be required for admission to this course.See "Chemistry Placement Examination" above. Principlesof inorganic and physical chemistry emphasizing physical

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    and chemical properties, atomic and molecular structure,chemical bonding, and states of matter.

    CHEMC 106 Principles of Chemistry II (3 cr.)P: C105 or equivalent. Fall, day; Spring, day, night;Summer II, day. Continuation of C105. Usually takenconcurrently with C126. Topics include condensedphases, solution chemistry, thermodynamics, equilibrium,and kinetics.

    CHEMC 110 The Chemistry of Life (3 cr.)High school chemistry recommended. Optional laboratory:C115. A nonmathematical introduction to organicmolecules and their transformation to useful materialssuch as drugs and polymers. An emphasis is placedon the chemical features of biomolecules includinghormones and neurotransmitters, proteins, lipids (fats),carbohydrates (sugars), and nucleic acids (DNA/RNA).The chemistry of enzymes, carcinogens, vitamins,antihistamines, anesthetics, genetic engineering, mentalhealth, and other health-related topics.

    CHEMC 115 Laboratory for C110 The Chemistry of

    Life (2 cr.)P or C: C110. Laboratory work illustrating topics coveredin C110.

    CHEMC 121 Elementary Chemistry Laboratory I(2 cr.)P or C: C101 (3 cr.) Fall, day, night; Spring, day, night;Summer II, day. Introduction to the techniques andreasoning of experimental chemistry. Emphasis is givento study of physical and chemical properties of inorganiccompounds.

    CHEMC 125 Experimental Chemistry I (2 cr.)P or C: C105 or equivalent. Fall, day, night; Spring, day;Summer I, day. Laboratory work illustrating topics coveredin C105.

    CHEMC 126 Experimental Chemistry II (2 cr.)lecture, laboratory P: C105 and C125; P or C: C106 orequivalent. Fall, day; Spring, day, night; Summer II, day.Continuation of C125. Laboratory work illustrating topicscovered in C105 and C106.

    CHEMC 209 Special Problems (1-2 cr.)P: two semesters of college chemistry and consent ofinstructor. Every semester, time arranged. Individuallysupervised special problems of chemical interest, e.g.,environmental problems, development of experiments,development of audiovisual materials, etc. May be

    repeated for credit, but maximum of 2 credit hours may beapplied toward a chemistry degree.

    CHEMC 301 Chemistry Seminar I (1 cr.)P or C: C409 and consent of instructor. Fall, day. Topicsin various areas of chemistry. Students are required toattend departmental seminars and prepare and present atleast one seminar on their research. C301 and C302 maybe elected three semesters for credit.

    CHEMC 302 Chemistry Seminar II (1 cr.)

    P or C: C409 and consent of instructor. Spring, day.Content same as C301.

    CHEMC 309 Cooperative Education in Chemistry(1 cr.)P: general and organic chemistry and consent ofdepartmental chairperson. Every semester, time arranged.Industrial or similar experiences in chemically orientedemployment. Grade is determined on basis of employment

    visitations, a written student report, and a supervisorevaluation report. May be repeated for a maximum of5 credit hours, of which 3 may be used to satisfy anadvanced chemistry elective.

    CHEMC 310 Analytical Chemistry (2 cr.)P: C106 and C126. Fall. Summer I, day. Fundamentalanalytical processes including solution equilibria,theory and applications of electrochemistry andspectrophotometry, and chemical methods of separation.

    CHEMC 311 Analytical Chemistry Laboratory (1 cr.)P or C: C310. Fall, Summer I, day. Laboratory instructionin the fundamental analytical techniques discussed in

    C310.

    CHEMC 325 Introductory Instrumental Analysis(5 cr.)P: C311. Spring. Instrumental methods of chemicalanalysis and separation for the chemical technician orpreprofessional chemistry major.

    CHEMC 341 Organic Chemistry I (3 cr.)P: C106. Fall, day, night; Spring, day; Summer I, day.Comprehensive study of organic compounds. Valencebond theory, stereochemistry, and physical properties oforganic compounds are discussed in detail. Introduction toreaction mechanisms and to spectroscopic identification.Synthesis and reactions of selected compounds are alsodiscussed.

    CHEMC 342 Organic Chemistry II (3 cr.)P: C341. Fall, day; Spring, day, night; Summer II,day. Continuation of C341. The chemistry of aromaticcompounds and other major functional groups arediscussed in detail. Multistep synthetic procedures andreaction mechanisms are emphasized. Introduction tobiological chemistry.

    CHEMC 343 Organic Chemistry Laboratory I (2 cr.)P: C126; P or C: C341. Fall, day, night; Spring, day,night; Summer I, day. Fundamental laboratory techniquesof organic chemistry, introduction to spectroscopic

    methods of compound identification, and general syntheticmethods.

    CHEMC 344 Organic Chemistry Laboratory II (2 cr.)P or C: C342; P: C343. Fall, night; Spring, day, night;Summer II, day. Preparation, isolation, and identification oforganic compounds, spectroscopic methods of compoundidentification, qualitative organic analysis, multistepsynthesis.

    CHEMC 360 Elementary Physical Chemistry (3 cr.)

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    P: C106, MATH 222, PHYS P202. Spring, day. Propertiesof gases and liquids, intermolecular forces, diffusion,chemical thermodynamics, ligand binding, kinetics, andintroduction to quantum chemistry and spectroscopy.Includes topics in biophysical chemistry. For students whodesire a survey course in physical chemistry.

    CHEMC 361 Physical Chemistry of Bulk Matter (3 cr.)P: C106, MATH 166, and PHYS P202 or PHYS 251 and

    C: MATH 261. Spring, day. Kinetic-molecular theory,gases, liquids, thermodynamics, statistical mechanics,solutions, transport properties, and phase and chemicalequilibria.

    CHEMC 362 Physical Chemistry of Molecules (4 cr.)P: C106, MATH 166, and PHYS P202 or PHYS 251 andC: MATH 261. Fall, day. Quantum chemistry, symmetry,atomic and molecular structure and spectra, solids,chemical kinetics, photochemistry, and introduction tostatistical thermodynamics.

    CHEMC 363 Experimental Physical Chemistry (2 cr.)P: C361 and C: C362 or P: C362 and C: C361. Spring.

    Experimental work to illustrate principles of physicalchemistry and to introduce research techniques.

    CHEMC 371 Chemical Informatics I (1 cr.)P: C106, Fall. Basic concepts of informationrepresentation, storage, and retrieval as they pertain tochemistry. Structures, nomenclature, molecular formulas,coding techniques for visualization of chemical structuresand properties.

    CHEMC 372 Chemical Informatics II: MolecularModeling (2 cr.)P: C341. Introduction to computer representation ofmolecular structure and simulation of chemical reactions;visualizing fundamental chemical concepts, such asreaction paths of standard organic reactions, molecularorbital diagrams, vibrations and conformational changes;quantitative structure activity relationships (QSAR),pharmacophore docking to biomolecules, and relatedmethods for drug design.

    CHEMC 409 Chemical Research (1-3 cr.)P: junior or senior standing and consent of instructor.Every semester, time arranged. Chemical or literatureresearch with a report. Can be elected only afterconsultation with research advisor and approval ofprogram. May be taken for a total of 10 credit hours, whichcount toward graduation. A minimum of three (3) credithours may be used to satisfy the advanced chemical

    elective in the Bachelor of Science in Chemistry degreeprogram.

    CHEMC 410 Principles of Chemical Instrumentation(3 cr.)P: C311 and C361. P or C: C362. Fall. Modern methodsof instrumental analysis, including spectroscopy,chromatography, and electrochemistry.

    CHEMC 411 Principles of Chemical InstrumentationLaboratory (2 cr.)

    P: C311. P or C: C410. Fall. Laboratory instruction in theinstrumental analysis techniques discussed in C410.

    CHEMC 430 Inorganic Chemistry (3 cr.)P: C362. Spring. Atomic structure; periodic trends andproperties of the elements. Introduction to symmetryand group theory. Valence bond, molecular orbital andligand field theories of bonding and their application tostructure and properties of inorganic and organometallic

    compounds. Spectroscopic properties and acid-base,oxidation-reduction, and coordination reactions ofinorganic compounds.

    CHEMC 435 Inorganic Chemistry Laboratory (1 cr.)P or C: C430. Spring. Synthesis, characterization, andstudy of chemical and physical properties of inorganic andorganometallic compounds.

    CHEMC 471 Chemical Information Sources (1 cr.)P: C341. Fall. Techniques for the storage and retrievalin both printed and computer-readable formats; sourcesof chemical information, including Chemical Abstracts;development of search strategies; and online searching of

    chemical databases.

    CHEMC 472 Computer Sources for ChemicalInformation (1 cr.)P: C471. Spring. Techniques for the utilization of the majorcomputer-based information tools found in academic andindustrial environments.

    CHEMC 484 Biomolecules and Catabolism (3 cr.)P: C342. Fall. The chemical and biophysical propertiesof biologically important molecules and systems. Specialemphasis on the relationship between structure andfunction in proteins, nucleic acids, and biomembranes, aswell as bioenergetics, kinetics, allosteric interactions, andenzyme catalysis.

    CHEMC 485 Biosynthesis and Physiology (3 cr.)P: C484. Spring. Mechanisms of biological catalysis,metabolism, biosynthesis.

    CHEMC 486 Biological Chemistry Laboratory (2 cr.)P: C484 or equivalent. P or C: C485. Spring. Anintroduction to the important laboratory techniquescurrently employed by practicing biological chemists,including biomolecule isolation, purification, enzymekinetics, and biomolecule characterization byelectrophoresis, centrifugation, and spectroscopicmethods.

    CHEMC 494 Introduction to Capstone (1 cr.)P: junior standing, B.A. or B.S. program. Fall, day; Springday. Course objectives are to: (1) facilitate student careerplanning, including topics such as work place or graduateschool, and resume preparation; (2) improve verbalcommunication and presentation skills; and (3) provideappropriate discussion and planning for the independentstudy project, the major objective of the C495 Capstonecourse.

    CHEMC 495 Capstone in Chemistry (1 cr.)

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    P: senior standing, B.A. or B.S. program. Fall, day;Spring, day. Independent study, under the supervisionof a chemistry faculty member or appropriate academicadvisor can be earned by completion of: (a) a chemicalresearch project; (b) a library research project in anarea of current scientific investigation; (c) a researchinvestigation in industry; or (d) a service activity inuniversity, government, public schools, or other science-related groups or organizations. Students will report the

    results of their activities in both a formal written report andoral presentation, prepare portfolios of undergraduatework in chemistry, discuss recent scientific literature, andexplore chemistry in society. Enrollment in the Capstonein Chemistry requires joint approval of the capstoneinstructor and the independent project advisor.

    CHEMC 496 Special Topics in Chemistry (0-3 cr.)P: junior or senior standing; other prerequisites willbe announced at the time of topic offering. Lectureson contemporary issue in chemistry. This course mayalso include reading assignments and special projects.Lectures on selected topics of current interest, as follows:

    CHEMC 496 Methods in Teaching Chemistry (1 cr.)P: C105. Fall; Spring. Designed for workshop leaders,this course offers continued support and training in-groupdynamics and learning theory. The larger goals for thiscourse are to continue the development of leadershipskills, foster ongoing communication among workshopleaders, and provide an environment for reviewing contentknowledge.

    Computer and Information Science

    Advanced Undergraduate and Graduate LevelCSCI 50200 Compiling and Programming Systems(3 cr.)P: 300. R: 470. Fall. Basic principles of compilers andcompiler design; control of translation, loading, and

    execution; symbolic coding systems; lexical and syntacticanalysis; design and operation of assemblers andmacroprocessors; and design of interpretive systems.Students are expected to complete a large programmingproject as part of the course.

    CSCI 50300 Operating Systems (3 cr.)P: 403. Spring. Basic principles of operating systems:addressing modes, indexing, relative addressing, indirectaddressing, stack maintenance; implementation ofmultitask systems; control and coordination of tasks,deadlocks, synchronization, and mutual exclusion; storagemanagement, segmentation, paging, virtual memory,protection, sharing, and access control; file systems;resource management; and evaluation and prediction ofperformance.

    CSCI 50400 Concepts in Computer Organization (3 cr.)P: 402.The fundamentals of computer hardware forcomputer scientists. An overview of the organizationof modern computers, ranging from sequential toadvanced machines. CISC, RISC, and vector processors;multiprocessors; virtual storage, hierarchical memory;interaction with O/S; connection models; high-levelprogramming support; and cost/performance analysis.

    CSCI 50600 Management of the Software DevelopmentProcess (3 cr.)A survey of the fundamental principles and concepts ofmanaging a software project. Topics include life cyclemodels, standards and goals, cost estimation, riskanalysis, tool use, component reuse, traceability, metrics,and process control and improvement. Students arerequired to apply management concepts using a project-based approach.

    CSCI 50700 Object-Oriented Design and Programming(3 cr.)An advanced exploration of the object-oriented modeland programming. Topics range from a review of theobject model to advanced concepts such as abstractionmechanisms, standard library/packages, OO design usingan OO language, and the syntax and the semantics ofconstructs.

    CSCI 51200 Numerical Methods for Engineers andScientists (3 cr.)P: MATH 351 or MATH 511; MATH 510; and knowledgeof programming. Not open to students with credit in 414.

    Not normally accepted for graduate credit in computerscience programs. A survey of the useful methods ofcomputation. Solution of nonlinear equations and systemsof nonlinear equations. Numerical methods for systemsof linear equations. Approximate differentiation andintegration. Numerical solution of ordinary differentialequations. Introduction to partial differential equations andelementary approximation methods.

    CSCI 51400 Numerical Analysis (3 cr.)P: 414 or equivalent. Iterative methods for solvingnonlinear equations, linear difference equations,applications to solution of polynomial equations,differentiation and integration formulas, numerical solutionof ordinary differential equations, and round-off error

    bounds.

    CSCI 51500 Numerical Analysis of Linear Systems(3 cr.)P: knowledge of programming, and MATH 351 or MATH511. Computational aspects of linear algebra; linearequations and matrices; direct and iterative methods;eigenvalues and eigenvectors of matrices; error analysis.

    CSCI 51600 Computational Methods in AppliedMathematics (3 cr.)P: 265 and MATH 510 or consent of instructor. A studyof techniques such as direct integration, shooting, finitedifference, finite elements, method of weighted residuals,and methods of characteristics for solving problems in fluidmechanics, solid mechanics, dynamics, and other fields ofapplied mathematics.

    CSCI 52000 Computational Methods in Analysis (3 cr.)P: 230 or equivalent, and MATH 351 or MATH 511. Atreatment of numerical algorithms for solving classicalproblems in real analysis with primary emphasis on linearand nonlinear systems of equations and on optimizationproblems; the writing, testing, and comparison ofnumerical software for solving such problems; and a

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    discussion of the characteristics of quality software forimplementing these algorithms.

    CSCI 53600 Data Communication and ComputerNetworks (3 cr.)P: 402. Data communications: communication hardwaretechnologies including local area and long-haul networkhardware, circuit and packet switching, interfaces betweencomputer and network hardware, and performance issues.

    Network architecture: protocol software and conceptuallayering, reliable delivery over an unreliable channel,transport protocols, virtual circuits, datagrams, Internetworking as a fundamental design concept, the client-server paradigm, naming and name binding, nameservers, addressing and address resolution, routingalgorithms, congestion and flow control techniques,network file systems, distribution of computation, andDARPA Internet protocols (TCP/IP) as examples ofprotocol organization.

    CSCI 53700 Introduction to Distributed Computing(3 cr.)P: 503 and 536. Introduction to the principles and methods

    in the design of distributed computing systems. It coversthe fundamentals of distributed computing from fourperspectives: underlying communication media, protocolsand their implications; operating system issues; high-levellanguage constructs; and distributed algorithms.

    CSCI 53800 The Design of Interactive Systems (3 cr.)Fundamental concepts and tools employed in designingthe interaction between humans and machines and themediating interfaces. Topics include: design problem,interface design concepts, experimental design andanalysis, cognitive and predictive models, the designproject, case studies, and applications.

    CSCI 53900 Computing with Distributed Objects (3 cr.)

    An introductory treatment of the distributed-object modeland programming. The topics range from a review of thedistributed and object models of computation to advancedconcepts such as remote method invocations, objectbrokers, object services, open systems, and future trendsfor distributed-object systems.

    CSCI 54100 Database Systems (3 cr.)P: 443 or equivalent. Spring. Fundamentals for thelogical design of database systems. The entity-relationship model, semantic model, relational model,hierarchical model, network model. Implementationsof the models. Design theory for relational databases.Design of query languages and the use of semantics forquery optimization. Design and verification of integrityassertions, and security. Introduction to intelligent queryprocessing and database machines.

    CSCI 54300 Introduction to Simulation and Modelingof Computer Systems (3 cr.)P: 265 and STAT 511 or equivalent. Simulation: discreteevent simulation, process-oriented simulation, generatingrandom numbers, simulation languages, simulationexamples of complex systems. Nondeterministic models:random variables, Poisson process, moment generatingfunctions, statistical inference, and data analysis.Modeling: elementary queuing models, network of queues,

    and applications to performance evaluation of computersystems.

    CSCI 54700 Information Storage and Retrieval andNatural Language Processing (3 cr.)P: 541. Complex data structures of fields within records,as well as clustered, multilist, and inverted files; keydecoding by tree and randomized techniques; overalltechniques of classical document retrieval systems, e.g.,

    the MEDLARS and NASA systems; overall techniquesof automatic document retrieval systems, e.g., TIP andSMART, the internal structure of SMART; questionanswering systems; and natural language translation.

    CSCI 54800 Introduction to Bioinformatics (3 cr.)P: 340, BIOL K483, CHEM C483, or MATH 511. Analysisof biological data employing various computationalmethods to obtain useful information in the emerging areaof bioinformatics. Topics include structures, functionsand evolution of proteins and nucleic acids, retrievaland interpretation of bioinformation from the Internet,learning principles, algorithms and software for sequencealignment, similarity search of sequence databases,

    estimation of phylogenetic trees, structural prediction, andfunctional inference.

    CSCI 54900 Intelligent Systems (3 cr.)This course will discuss problems in the area of intelligentsystems. Topics include the formalisms within which theseproblems are studied, the computational methods thathave been proposed for their solution, and the real-worldtechnological systems to which these methods have beenapplied.

    CSCI 55000 Computer Graphics (3 cr.)An introduction to computer graphics. Topics includethe concepts, principles, algorithms, and programmingtechniques in 3D interactive computer graphics. Emphasis

    is on the development and applications of 3D graphicalgorithms and methods.

    CSCI 55200 Advanced Graphics and Visualization(3 cr.)P: 550. An introduction to data visualization methodsand tools, and related graphics techniques. Students willexplore a variety of data representation and modelingtechniques, their corresponding visualization algorithms,and practical visualization applications in scientific,engineering, and biomedical fields.

    CSCI 55600 Fault-Tolerant Computing (3 cr.)P: 362. Concepts of fault-tolerant computing; phases

    of fault-tolerance; applications to commercial,communication, and aerospace systems; fault-tolerance inmulti-processor systems; diagnosis techniques; softwarefault-tolerance.

    CSCI 56500 Programming Languages (3 cr.)P: 300. R: 470. Fall. An exploration of modern orunconventional concepts of programming languages, theirsemantics, and their implementations; abstract data types;axiomatic semantics using Hoare's logic and Dijkstra'spredicate transformers; denotational semantics; functional,object-oriented, and logic programming; concurrency and

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    Owicki-Gries theory. Example languages include ML, Ada,Oberon, LISP, PROLOG, and CSP.

    CSCI 58000 Algorithm Design, Analysis, andImplementation (3 cr.)P: 463 and 470. Basic techniques for designing andanalyzing algorithms: dynamic programming, divide-and-conquer, balancing, upper and lower bounds on time andspace costs, worst case and expected cost measures.

    A selection of applications such as disjoint set union/find, graph algorithms, search trees, pattern matching.The polynomial complexity classes P, NP, and co-NP;intractable problems.

    CSCI 58200 Automata and Formal Languages (3 cr.)P: 470. Spring. Finite automata, regular expressions;push-down automata, context-free grammars; andlanguages and behaviors. Closure properties, pumpinglemmas, and decision procedures. Deterministic context-free languages and LR(k) parsing; brief survey of theChomsky hierarchy.

    CSCI 58500 Mathematical Logic I (3 cr.)

    Students should register for MATH 585. P: MATH 351.Formal theories for propositional and predicate calculuswith study of models, completeness, and compactness.Formalization of elementary number theory; Turingmachines, halting problem, and the undecidability ofarithmetic.

    CSCI 59000 Topics in Computer Science (3 cr.)Fall, spring. Directed study for students who wish toundertake individual reading and study on approvedtopics.

    Courses for MajorsCSCI 23000 Computing I (4 cr.)P or C: MATH 154 or MATH 159. The contextof computing in history and society, informationrepresentation in digital computers, introductionto programming in a modern high-level language,introduction to algorithm and data structures, theirimplementation as programs.

    CSCI 24000 Computing II (4 cr.)P: 230. Continues the introduction of programming beganin CSCI 230, with particular focus on the ideas of dataabstraction and object-oriented programming. Topicsinclude programming paradigms, principle of languagedesign, object-oriented programming, programming anddebugging tools, documentation, recursion, linked datastructures, and introduction to language translation.

    CSCI 26500 Advanced Programming (3 cr.)P or C: ECE 264 and CSCI 242 or CSCI 230. Spring.Learn advanced programming skills and concepts.Introduction to software engineering: problem specificationand program design with emphasis on object-orientedprogramming, programming style, debugging, anddocumentation. A significant software project's required.(This course is for computer engineering and computerinformation systems majors.)

    CSCI 30000 Systems Programming (3 cr.)

    P or C: 230 and 240. Fall. Assembly languageprogramming and structure of a simple and a typicalcomputer. Pseudo operations, address structure,subroutines, and macros. File I/O and bufferingtechniques. Interfacing with high-level languages.Assemblers: one- and two-pass assemblers, systemdependent and independent assembler features, anddesign options. Loaders, linkers, and macro processors.

    CSCI 34000 Discrete Computational Structures (3 cr.)P: 230 and MATH 165. Fall. Theory and application ofdiscrete mathematics structures and their relationshipto computer science. Topics include mathematical logic,sets, relations, functions, permutations, combinatorics,graphs, Boolean algebra, digital logic, recurrencerelations, and finite-state automata.

    CSCI 35500 Introduction to Programming Languages(3 cr.)P: 240 and 340. Spring. Programming language conceptsand different paradigms of programming. Topics includesyntax and semantics of high-level languages, parsingmethods, subprograms and their implementation, data

    abstraction, language translation overview includinglexical analysis, syntax-directed translation, symbol tablehandling, code generation, functional programming, logicprogramming, and object-oriented programming.

    CSCI 36200 Data Structures (3 cr.)P: 240 and 340. Spring. A study of the design andanalysis of data structures and algorithms. Abstractdata types: arrays, stacks, queues, lists, trees, andgraphs. Algorithms: sorting, searching, and hashing. Filestructures: organization and access methods.

    CSCI 40200 Architecture of Computers (3 cr.)P: 340. Fall. Basic logic design. Storage systems.Processor organization: instruction formats, addressing

    modes, subroutines, hardware and microprogrammingimplementation. Computer arithmetic, fixed and floatingpoint operations. Properties of I/O devices and theircontrollers. Interrupt structure. Virtual memory structure,cache memory. Examination of architectures such asmicrocomputers, minicomputers, and vector and arrayprocessors.

    CSCI 40300 Introduction to Operating Systems (3 cr.)P: 362, and 402. Spring. Operating system concepts;history, evolution and philosophy of operating systems.Concurrent processes, process coordination andsynchronization, CPU scheduling, deadlocks, memorymanagement, virtual memory, secondary storage andfile management, device management, security andprotection, networking, and distributed and real-timesystems.

    CSCI 41400 Numerical Methods (3 cr.)P: MATH 262 or MATH 351. Fall. Error analysis, solutionof nonlinear equations, direct and iterative methodsfor solving linear systems, approximation of functions,numerical differentiation and integration, and numericalsolution of ordinary differential equations. Not open tostudents with credit in 512.

    CSCI 43200 Security in Computers (3 cr.)

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    P:403. An introduction to computing security to includecryptography, identity and authentication, softwaresecurity, operatiing system security, trusted operatingsystem design and evaluation, network threats anddefenses, security management, legal aspects of security,privacy and ethics.

    CSCI 43500 Multimedia Information Systems (3 cr.)P or C: CSCI 362, MATH 351/511. Multimedia inforamtion

    systems concepts, evolution of multimedia informationsystems, media and supporting device commonlyassociated, image databases, techniques for presentingvisual information, video databases, multimodels, audiodatabases, text databases, and multimedia informationsystems architecture.

    CSCI 43600 Principles of Computer Networking (3 cr.)P: CSCI 362. Survey of underlying principles, fundamentalproblems, and their solutions in designing computernetworks. Laboratory projects include using networksystems and network simulation environments. Topicsinclude: motivations, networking topologies, layered opensystems protocols, transmission capacity, circuit and

    packet switching, packet framing and error correction,routing, flow and congestion control, and internetworking.

    CSCI 43700 Introduction to Computer Graphics (3 cr.)P: 362 and MATH 351/511. An introduction to 3Dprogramming with emphasis on game engine developmentusing 3D graphics techniques and the standard andplatform independent OpenGL library. Topics includelighting, shading, texture mapping, coordinate systemsand transformations, collision detection, 3D geometric andphysically based modeling and animation.

    CSCI 43800 Advanced Game Development (3 cr.)P: 437. Advanced game design and developmentprinciples and technologies. Students will gain practical

    experience through extensive game development project.Topics include character animation, special effects, userinterface design, networking for computer games, gameengine components and variations, game performanceconsiderations, artificial intelligence, and ethics incomputer games.

    CSCI 44100 Client-Server Database Systems (3 cr.)P or C: CSCI 362. Database system concepts, datamodels database design, CASE tools, SQL, queryprocessing and query optimization, transactionpr