PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng...

42
PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012

Transcript of PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng...

Page 1: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

PTT 102: Organic Chemistry

Sem I 2012/2013Khadijah Hanim Abdul Rahman

School of Bioprocess EngUniMAP

Week 2: 18/9/2012

Page 2: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

Learning Outcomes

Ability to APPLY the chemical and physical properties of each functional group carries out theoretical reaction mechanism at molecular level.

Page 3: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

CHAPTER 1

ALKANES- Structure, nomenclature and physical

properties of alkanes and cycloalkanes: Define and identify the principle in naming and physical properties of alkanes.

- Conformational analysis: Discuss and interpret the conformational analysis or rotation about carbon-carbon single bonds in molecules such as ethane and butane.

Page 4: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

Alkanes:hydrocarbons containing only single bonds

Straight-chain alkanes: the carbons are in a continuous chain with no branches.

General formula: CnH2n+2

Page 5: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

Carbon – forms 4 covalent bonds and H form 1 covalent bond.

C4H10 onwards has 2 or more possible stuctures.

Eg: C4H10

Constitutional isomers – compounds such as butane and isobutane – same molecular weight but has different structures.

Page 6: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

Nomenclature of Alkyl Substituents

Removing a hydrogen from an alkane results in an alkyl substituent

Alkyl substituent are named by replacing the ‘ane’ ending with ‘yl’

Page 7: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

Different kind of carbon and hydrogen

Primary carbon: carbon bonded to only 1 other carbon

Secondary carbon: carbon bonded to 2 other carbons

Tertiary carbon: carbon bonded to 3 other carbons

Page 8: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

Nomenclature of Alkanes

The systematic name of an alkane is obtained using the following rules:

1. Determine the number of carbons in the longest continuous chain.

- This chain is called the parent hydrocarbon.

- The no of carbons in the parent hydrocarbon becomes the alkane’s “last name”.

Page 9: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.
Page 10: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

2. Number the chain so that the substituent gets the lowest number

- Name of any alkyl substituent that hangs off the parent hydrocarbon is placed in front + the no to designate the carbon to which the alkyl substituent is attached.

Page 11: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

3. Number the substituents to yield the lowest possible number in the number of the compound.

- If more than 1 substituent is attached to parent hydrocarbon, the chain is numbered in direction that will produce the lowest possible numbers.

- Substituents listed in alphabetical order

Page 12: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

If 2 or more substituents are same: prefixes di, tri and tetra are used- indicating the no. of substituents of the compound.

Note: Prefixes are ignored in alphabetizing substituent groups except for iso and cyclo- not ignored

Page 13: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

4. Assign the lowest possible numbers to all of the substituents

Page 14: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

5. If the same substituent numbers are obtained in both directions, the first group cited receives the lower number

Page 15: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

6. If a compound has two or more chains of the same length, the parent hydrocarbon is the chain with the greatest number of substituents

Page 16: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

7. Certain common nomenclatures are used in the IUPAC system- systematic substituent names are preferred.

- Systematic substituent names obtained by numbering the alkyl substituent starting at the carbon attached to the parent hydrocarbon. Carbon attached to parent hydrocarbon is always no 1 carbon.

Note: if prefix such as di is part of a branch name, it is included in the alphabetization

Page 17: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

Some constituents have only a systematic name.

Page 18: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

Examples

Draw a structure for:- 2,3-dimethylhexane

Give systematic name:

- Answer: 3-ethyl-6-methyl-5-propylnonane

Page 19: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

Provide an acceptable name for the alkane shown below.

 Answer: 2, 5-dimethylheptane

Page 20: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

Nomenclature of Cycloalkanes- skeletal structures

Cycloalkanes: alkanes with their carbon atoms arranged in a ring

Has 2 fewer hydrogens than acyclic alkane

General molecular formula: CnH2n

Cycloalkanes are named by adding prefix ‘cyclo’ to the alkane name.

Page 21: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

Rules for naming cycloalkanes

Resemble the rules for naming acyclic alkanes.

1. No number is needed for a single substituent on a ring

- The ring is parent hydrocarbon unless the substituent has more carbon than the ring

Page 22: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

2. Name the two substituents in alphabetical order

- The no 1 position is given to the substituent listed 1st.

Page 23: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

3. If there are more than two substituents, they are cited in alphabetical order

- Substituent given the no 1 position is the one results in a 2nd substituent getting as low no as possible.

Page 24: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

Exercises:

Provide the systematic name of the compound shown.

4-butyl-1-ethyl-2- methylcycloheptane

Give the systematic name:

Answer: 4-butyl-1,2-dimethylcyclohexane

Answer:

Page 25: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

The physical properties of alkanes

Boiling points

- Boiling point (bp) of a compound is the temperature at which the liquid form becomes a gas (vaporizes).

- To vaporize- must overcome the forces that hold the individual molecules close to each other in the liquid

- If the molecules are held by strong forces- a lot of energy will be needed to pull the molecules away from each other- high boiling point.

- In contrast for molecules that being held by weak forces- low boiling point.

Page 26: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

Attractive forces between alkanes- relatively weak- van der waals forces.

van der Waals force

Dipole–dipole interaction

Hydrogen bonds

Page 27: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

van der Waals Forces

•The boiling point of a compound increases with the increase in van der Waals force• magnitude of the van der waals forces that hold alkane together depends on- area of contact between molecules.• the greater the area of contact- the stronger the van der waals forces- more energy to overcome.

Page 28: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

Melting points

Melting point (mp) of a compound is the temperature at which its solid form is converted into liquid.

mp of alkanes- as molecular weight increase, mp increases.

In addition to intermolecular interactions mentioned, mp is influenced by the type of packing- arrangement of the molecules.

Page 29: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

•Alkanes with odd no of carbons- pack less tightly•The end molecules are facing and repelling the methyl group on the end of the other- increasing the average distance between the chains- weaker interactions.

Page 30: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

Solubility

Polar compounds dissolve in polar solvents and vice versa. “like dissolves like”.

Reason ‘polar dissolves polar’- polar solvent, ie water has partial charges that can interact with partial charges on polar compound.

Clustering of the solvent molecules around the polar molecules separates them from each other- dissolve

The interaction between solvent and solute molecules- solvation

Page 31: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

Nonpolar compounds- no net charge.Dissolves in nonpolar solvents- van der

waals interactions between solvent molecules and solutes molecules

Page 32: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

Exercises

41) Which of the following has the lowest boiling point?A) CH3CH2CH2CH2CH2CH3B)

C)

D)

E) CH3CH2CH2CH2CH2CH2CH3

Page 33: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

Explain why has a lower boiling point than CH3CH2CH2CH3.

Answer: CH3CH2CH2CH3 has greater van der Waals forces because it has a greater contact area than isobutane. Therefore, the boiling point of CH3CH2CH2CH3 is higher.

Page 34: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

Conformations of Alkanes: Rotation about Carbon–Carbon Bonds

Conformations: different spatial arrangements of the atoms that result from rotation about a single bond.

Conformational isomers/conformers- molecules with different conformations.

The conformers produced by rotation about carbon-carbon bond ethane: staggered conformer & eclipsed conformer.

Page 35: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

Staggered conformer- more stable and lower in energy than eclipse conformer. Lower energy- low intramolecular repulsions between hydrogens due to large distances.

Page 36: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

Different Conformations of Ethane

Figure shows the potential energies of all conformers of ethane obtained in one complete 3600 rotation about the C-C bond. Noticed that staggered conformers are at energy minima, whereas eclipsed conformers are at energy maxima.

Page 37: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

Conformations of n-butane

Butane has 3 C-C single bonds Rotation can occur about each of them. The Newman projections below show the staggered and

eclipsed conformers that result from rotation about the C1-C2 bond:

Page 38: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

The staggered conformers resulting from rotation about the C1-C2 bond in butane- have the same energy

The staggered conformers resulting from rotation about the C2-C3 bond- do not have the same energy. The staggered and eclipsed conformers from rotation about the C2-C3 bond in butane are:

Page 39: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

Of the staggered conformers- D is more stable than B and F- the 2 methyl groups are far apart from each other.Most stable conformers- anti conformer (anti= opposite)The other 2 conformers, B and F- gauche conformers (gauche=left)

Conformers CH3 substituents Energy

Anti conformer (D) Opposite of each other

Lower energy

Gauche conformer (B&F)

Adjacent to each other

Higher energy

Page 41: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

Anti and gauche conformers do not have the same energy Steric strain

Steric strain: strain experienced by a molecule when atoms or groups are close enough to one another for their electron clouds to repel each other. Thus possesses additional energy.

Page 42: PTT 102: Organic Chemistry Sem I 2012/2013 Khadijah Hanim Abdul Rahman School of Bioprocess Eng UniMAP Week 2: 18/9/2012.

•Eclipsed conformers resulting from rotation about the C2-C3 bond in butane- different energies.•The eclipsed conformer A is less stable than C and E.