Physical Methods of Microbial Control

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    MICROBIAL CONTROL

    Ms. Nerralyn N. Muni R.M.T.

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    Biosafety Levels

    LevelLevel RiskRisk Types of Types of

    AgentsAgents

    Example ofExample of

    AgentsAgents

    Precautions requiredPrecautions required

    II MinimalMinimal

    biohazardbiohazard

    Those notThose not

    known toknown to

    cause diseasecause disease

    in healthyin healthyadultsadults

    Bacillus subtilis,Bacillus subtilis,

    MycobacteriumMycobacterium

    gordonaegordonae, soil, soil

    microbesmicrobes

    No special equipmentNo special equipment

    required. Work can berequired. Work can be

    done on opendone on open

    benchtops.benchtops.

    IIII ModerateModerate

    biohazardbiohazard

    CommonCommon

    pathogenspathogens

    found infound inhumanhuman

    blood, bodyblood, body

    fluids, andfluids, and

    tissuestissues

    Escherichia coli,Escherichia coli,

    SalmonellaSalmonella, HIV,, HIV,

    hepatitis B virus,hepatitis B virus,influenzainfluenza

    Procedures with theProcedures with the

    potential for aerosolspotential for aerosols

    or splashes must beor splashes must beconducted in aconducted in a

    biologic safety cabinet.biologic safety cabinet.

    Access toAccess to

    laboratory must belaboratory must be

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    Biosafety Levels Continued

    LevelLevel RiskRisk Types of Types of

    AgentsAgents

    Example ofExample of

    AgentsAgents

    Precautions requiredPrecautions required

    Limited when work isLimited when work is

    being conducted. Anbeing conducted. An

    autoclave must beautoclave must beavailableavailable

    IIIIII HighHigh

    biohazardbiohazard

    Agents thatAgents that

    may causemay cause

    serious orserious or

    lethal diseaselethal diseasefromfrom

    exposure viaexposure via

    inhalation.inhalation.

    EffectiveEffective

    Bacillus anthracisBacillus anthracis

    Francisella,Francisella,

    Brucella,Brucella,

    MycobacteriumMycobacteriumtuberculosis,tuberculosis,

    Rickettsia rickettsiiRickettsia rickettsii,,

    Manipulation ofManipulation of

    infectious materialsinfectious materials

    must be conducted inmust be conducted in

    class II biologic safetyclass II biologic safetycabinet by personnelcabinet by personnel

    wearing personalwearing personal

    protective clothing.protective clothing.

    Access toAccess to

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    Biosafety Levels Continued

    LevelLevel RiskRisk Types of Types of

    AgentsAgents

    Example ofExample of

    AgentsAgents

    Precautions requiredPrecautions required

    TreatmentTreatment

    availableavailable

    Coxiella burnetii,Coxiella burnetii,

    mold stages ofmold stages of

    systematic fungisystematic fungi

    laboratory must belaboratory must be

    controlled.controlled.

    Specialized ventilationSpecialized ventilationminimizing release ofminimizing release of

    infectious aerosolsinfectious aerosols

    requiredrequired

    IVIV ExtremeExtreme

    biohazardbiohazard

    Agents thatAgents that

    pose a highpose a highrisk of liferisk of life--

    threateningthreatening

    disease,disease,

    which maywhich may

    Ebola virus,Ebola virus,

    Lassa virus, and

    Lassa virus, andothers that causeothers that cause

    hemorrhagichemorrhagic

    feversfevers

    Requires use of classRequires use of class

    III biologic safetyIII biologic safetycabinet or fullcabinet or full--body,body,

    airair--supplied positivesupplied positive

    pressure suit andpressure suit and

    independent unit withindependent unit with

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    Biosafety Levels Continued

    Level Risk Types of

    Agents

    Example of

    Agents

    Precautions

    required

    be transmitted

    by aerosolsand for which

    there is no

    vaccine or

    therapy

    specialized

    ventilation andwaste management

    systems

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    Biologic Safety Cabinets

    ClassClass Description Description Use Use

    II Unsterilized room air passes into theUnsterilized room air passes into the

    cabinet. Air passes through a highcabinet. Air passes through a high--

    efficiency particulate air (HEPA) filterefficiency particulate air (HEPA) filter

    before being exhaustedbefore being exhausted

    Provides minimalProvides minimal

    personnel protection.personnel protection.

    Doesnt protect workDoesnt protect work

    surface.surface.

    IIII Laminar flow cabinets with variableLaminar flow cabinets with variable

    sash opening. Air passes through onesash opening. Air passes through one

    HEPA filter before reaching the workHEPA filter before reaching the work

    surface and another before beingsurface and another before beingexhausted.exhausted.

    Type most commonlyType most commonly

    used in hospitalused in hospital

    microbiologymicrobiology

    laboratories. Provideslaboratories. Providesprotection for both theprotection for both the

    laboratorian and thelaboratorian and the

    work. Must maintain anwork. Must maintain an

    open area for 3 feetopen area for 3 feet

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    Biologic Safety Cabinets Continued

    ClassClass Description Description Use Use

    From cabinet duringFrom cabinet during

    operation. Must beoperation. Must be

    certified initially,certified initially,whenever moved morewhenever moved more

    than 18 inches, andthan 18 inches, and

    annually thereafter.annually thereafter.

    IIIIII Self Self--contained system, completelycontained system, completely

    enclosed, with negative pressure. Air isenclosed, with negative pressure. Air isfilter sterilized coming in and goingfilter sterilized coming in and going

    out. Gloves are attached to the frontout. Gloves are attached to the front

    for manipulations inside the hood.for manipulations inside the hood.

    Provides maximumProvides maximum

    protection. Usedprotection. Usedextensively in researchextensively in research

    facilities.facilities.

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    Physical Methods of Microbial

    Control

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    Dry Heat Sterilization

    kills spores, vegetative forms

    ideal for sterilizing glasswares, metalwares,

    and anh

    ydrous oils Oxidizing to ashes

    Burns cell constituents

    Denaturing proteins

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    Direct flaming

    Incineration

    Oven

    160-170 deg. Celsius- 2-3 hours

    200 deg. Celsius 1 hours

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    Moist Heat Sterilization

    more effective than dry heat method

    coagulation of the cell protein

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    Autoclaving

    most effective method of moist heat sterilization

    for vegetative cells, spores

    121 deg. Celsius- 30 mins. 15 psi

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    Boiling

    for vegetative cells and viruses

    100 deg. Celsius-10 mins

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    Pasteurization

    Destroy spoilage organism in wine, vinegar,

    milk, juices

    62 deg. Celsius- 30 mins 72 deg. Celsius- 15 secs (HTST)

    82 deg. Celsius- 20 secs-ice cream

    104-150 deg. Celsius- 2-5 secs (UHT)

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    Fractional Sterilization Method

    for vegetative forms of microorganisms

    Tyndallization

    Inspissation

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    DayDayTemperTemper

    atureatureTime Time PurposePurpose

    11 8585CC 60 minutes60 minutesDrying of the medium and killing theDrying of the medium and killing the

    organisms in their vegetative formorganisms in their vegetative form

    Time inTime in

    betweenbetween

    overnightovernight

    incubationincubationGrowth of vegetative forms from sporesGrowth of vegetative forms from spores

    2275 to75 to

    8080CC20 minutes20 minutes killing the organisms in their vegetative formkilling the organisms in their vegetative form

    Time inTime in

    betweenbetween

    overnightovernight

    incubationincubation

    Growth of vegetative forms from any sporesGrowth of vegetative forms from any spores

    remainingremaining

    3375 to75 to

    8585CC20 minutes20 minutes killing the organisms in their vegetative formkilling the organisms in their vegetative form

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    Filtration

    nitrocellulose or cellulose acetate

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    Cold

    The effectiveness of low temperatures

    depends on the particular microorganisms and

    the intensity of the application

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    Dessication

    Removal of H2O

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    Osmotic pressure

    high concentrations of salts and sugars

    undergo plasmolysis

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    Radiation

    Ultraviolet radiation

    reduction of air borne contamination

    has poor penetration capability

    Ionization Radiation

    high energy emitted from radioactive isotopes

    such as cobalt 60 (gamma rays) or by cathode or

    beta rays

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    Chemical Methods of Microbial

    Control

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    Principles of Effective Disinfection

    Careful attention should be paid to the

    properties and concentration of the

    disinfectant to be used

    The presence of organic matter, degree of

    contact with microorganisms, and

    temperature should also be considered

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    Phenol and Phenolics

    injuring plasma membranes

    inactivating enzymes

    denaturing proteins

    Triclosan- phenolic compound toothpaste,

    lotions, deodorant soaps

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    Biguanides (Chlorhexidine)

    damages plasma membranes of vegetative

    cells

    Soaps, lotions, cath

    eters, surgical mesh

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    Halogens

    Iodine combines with the amino acid tyrosine

    Tincture

    Iodophore

    Chlorine is added to water forming

    hypochlorous acid

    Water treatment

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    Alcohols

    denaturing proteins

    dissolving lipids

    Antiseptic, disinfectant

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    Heavy Metals and Their Compounds

    Silver, mercury, copper, and zinc

    Opthalmia neonatorum

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    Quaternary Ammonium Compounds

    (Benzalkonium chloride, Cetylpyridinium chloride)

    disrupting plasma membranes most effective against gram-positive bacteria

    Disinfectant, non-food substances

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    Organic Acids and Derivatives

    Sorbic acid, benzoic acid, and propionic acid

    inhibit fungal metabolism

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    Aldehydes

    inactivating proteins

    Gluteraldehyde medical instruments

    Formalydehyde vaccine preparation

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    Gaseous Chemosterilizers

    protein denaturation

    Ethylene oxide gas

    Easily penetratesh

    ard-to-reach

    places and fabricsand does not damage moisture-sensitive material

    Toxic, explosive and potentially carcinogenic

    For medical devices

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    Oxidizing Agents

    Ozone and peroxide are used as antimicrobial

    agents.

    oxidizing molecules inside cells

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    Antimicrobial Action

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    Principles

    1. The agent must be in an active form.

    This is ensured through the *pharmacodynamic

    design of the drug, which takes into account the

    route through which the patient will receive the

    agent (e.g., orally, intramuscularly, intravenously).

    * The study of the action or effects of drugs on living

    organisms.

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    2. The antibiotic must also be able to achievesufficient levels or concentrations at the siteof infection so that it has a chance to exert an

    antibacterial effect (i.e., be in anatomicapproximation with the infecting bacteria).

    The ability to achieve adequate levels depends onthe *pharmacokinetic properties of the agent.

    * The process by which a drug is absorbed,distributed, metabolized, and eliminated by thebody.

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    3. The remaining steps in antimicrobial action

    relate to direct interactions between the

    antibacterial agent and the bacterial cell

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    Mode of Action of Antibacterial

    Agents

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    Inhibitors of Cell Wall Synthesis

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    Beta-Lactam Antimicrobial Agents

    Beta-lactam antibiotics are those that contain

    the four-membered, nitro-gen-containing,

    beta-lactam ring at the core of their structure.

    The beta-lactam ring is key to the mode of

    action of these drugs that target and inhibit

    cell wall synthesis by binding the enzymes

    involved in synthesis.

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    AntibioticsAntibioticAntibiotic Mode of Mode of

    ActionAction

    ActivityActivity Comments Comments

    BetaBeta--LactamsLactams

    PenicillinsPenicillins

    Penicillin,Penicillin, ampicillinampicillin,,mezlocillinmezlocillin,,

    piperacillinpiperacillin,, AugmentinAugmentin

    CephalosporinsCephalosporins

    CefazolinCefazolin,, cofotetancofotetan,,

    ceftriaxoneceftriaxone,, cefotaximecefotaxime,,

    ceftazidimeceftazidime

    AztreonamAztreonam

    ImipenemImipenem

    InhibitionInhibition

    of cell wallof cell wall

    synthesissynthesis

    EffectiveEffective

    against gramagainst gram--

    positives andpositives and

    gramgram--

    negativesnegatives

    UsuallyUsually

    bactericidal.bactericidal.

    Low toxicity.Low toxicity.

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    Glycopeptides

    Glycopeptides bind to precursors of cell wall

    synthesis, the binding interferes with the

    ability of the PBP enzymes, such as

    transpeptidases and transglycosylases, to

    incorporate the precursors into the growing

    cell wall

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    Antibiotics Continued

    AntibioticAntibiotic Mode of Action Mode of Action Activity Activity Comments Comments

    GlycopeptidesGlycopeptides

    VancomycinVancomycin

    Inhibition of cellInhibition of cell

    wall synthesiswall synthesis

    EffectiveEffective

    against gramagainst gram--

    positivespositives

    resistant toresistant to

    other betaother beta--

    lactams.lactams.

    UsuallyUsually

    ineffectiveineffective

    against gramagainst gram--negatives.negatives.

    Used to treatUsed to treat

    methicillinmethicillin

    resistantresistant

    staphstaph

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    Inhibitors of Cell Membrane

    Function

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    Inhibitors ofProtein Synthesis

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    Aminoglycosides

    Aminoglycosides binds to protein receptors on

    the organisms 30S ribosomal subunit

    gentamicin.

    tobramycin, amikacin, netilmicin,

    streptomycin, and kanamycin

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    Macrolide-Lincosamide-Streptogramin

    (MLS) Group

    macrolides, such as erythromycin,

    azithromycin, and clar-ithromycin, and

    clindamycin (a lincosamide).

    binds to receptors on the bacterial 5OS

    ribosomal subunit

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    Oxazolidones

    currently represented by linezolid

    Linezolid is a synthetic agent that inhibits

    protein synthesis through a unique

    mecha-nism.

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    Chloramphenicol

    binds to the 5OS ribosomal subunit

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    Tetracyclines

    binds to the 30S ribosomal subunit

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    Inhibitors ofDNA and RNA

    Synthesis

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    Fluoroquinolones

    simply referred to as quinolones, are

    derivatives of nalidixic acid, an older

    antibacterial agent.

    bind to and interfere withDNA gyrase

    enzymes

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    Metronidazole

    direct interactions between the activated drug

    and DNA that results in breakage ofDNA

    strands

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    Rifampin

    binds to the enzyme DNA-dependent RNA

    polymerase and inhibits synthesis of the RNA

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    Inhibitors of Other Metabolic

    Processes

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    Sulfonamides

    bind to dihydropteroate synthase and disrupt

    the folic acid pathway

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    Trimethoprim

    dihydrofolate reductase is inhibited

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    Nitrofurantoin

    have several targets involved in bacterial

    protein and enzyme & synthesis and the drug

    also may directly damage DNA

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    Testing Methods

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    Disk Diffusion/Kirby Bauer Technique

    Using the disk diffusion susceptibility test,

    antimicrobial resistance is detected by

    challenging bac-terial isolates with antibiotic

    disks that are placed on the surface of an agar

    plate that has been seeded with a lawn of

    bacteria.

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    BrothDilution Tests

    Using the broth dilution test, the microorganismis grown in liquid media containing differentconcentration of antibiotics.

    The minimum inhibitory concentration (MIC) isthe lowest concentration of chemotherapeuticagent capable of preventing microbial growth.

    The minimum bactericidal concentration (MBC) is

    the lowest concentration of chemotherapeuticagent that kills bacteria

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    Broth Microdilution Methods

    Commercial panels are designed to receive

    the stan-dard inoculum and are incubated

    using conditions and durations recommended

    for conventional broth microdilution.

    They are growth-based systems that require

    overnight incubation, and NCCLS interpretive

    criteria apply for interpretation of mostresults.

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    Agar Dilution Derivations

    Uses an instrument to apply antimicrobial

    agent to the surface of an already prepared

    agar plate in a concentric spiral fashion.

    Start-ing in the center of the plate the

    instrument deposits the highest concentration

    of antibiotic and from that point drug

    application proceeds to the periphery of theplate

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    Serum bactericidal test

    The serum bactericidal test (SBT) is analogous

    to the MIC-MBC test except that the medium

    used is patients serum that contains the

    thera-peutic antimicrobial agent(s) the patient

    has been receiving