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196 DAFTAR PUSTAKA Adisarwanto, T. & Widyastuti, Y.E. 2004. Meningkatkan Produksi Jagung di Lahan Kering, Sawah, dan Pasang Surut. Penebar Swadaya. Jakarta. Adviento-Borbe, M.A.A., Haddix, M.L., Binder, D.L., Walters, D.T. & Dobermann, A., 2007. Soil greenhouse gas fluxes and global warming potential in four high-yielding maize systems. Global. Change. Biol. 13: 1972-1988. Adisyahputra, Indrayanti, R. & Eldina, D. 2004. Karakterisasi sifat toleransi terhadap cekaman kering kacang tanah (Arachis hypogaea L.) varietas nasional pada tahap perkecambahan. J. Matematika Sains Teknologi. 5: 1-11. Akiyama, H., Tsuruta, H. & Watanabe, T. 2000. N 2 O and NO emissions from soils after application of different chemical fertilizers. Chemosphere. Global Change. Sci. 2: 313-320. Alvarado, P. & Manjon, J.L. 2009. Selection of enzymes for terminal restriction fragment length polymorphism analysis of fungal internally transcribed spacer sequences. Appl. Environ. Microbiol. 75: 4747-4752. Amann, R.L., Ludwig, W. & Schleifer, K.H. 1995. Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol. Rev. 59: 143-169. Anderson, J.M. & Ingram, J.S.I. 1993. Colorimetric determination of ammonium. In: Tropical Soil Biology and Fertility: A Handbook of Methods (J.M. Anderson & J.S.I. Ingram, eds). CAB International, Wallingford, UK. pp. 73-74. Anonim. 1985. Standard Methods For The Examination of Water and Wastewater. 18 ed . American Public Health Association., Washington. pp. 54-58. Anonim, 2002. Agribisnis Jagung. Informasi dan Peluang. Festival Jagung Pangan Pokok Alternatif. Deptan. Istana Bogor. pp. 26-27. Anonim. 2007. Climate Change 2007: The Physical Science Basis. Intergovernmental Panel On Climate Change (IPCC). The Fourth Assessment Report. Cambridge, UK, UNEP. University Press. pp: 996. Anonim, 2013. Greenhouse Gas Emissions and Sinks. Environmental Protection Agency (EPA). Report. USA. Antoun, H., Chantal, J., Goussard, N., Chapot, R. & Ialanele, R. 1998. Potential Rhizobium and Bradyrhizobium species on plant growth promoting rhizobacteria on non-legumes: effect on radishes (Raphanus sativius L.). Plant. Soil. 204: 57-67. Asbhy, J.A., Bowden, W.B. & Murdoch, P.S. 1998. Controls on denitrification in riparian soils in headwater catchments of the hardwood forest in the Catskill Mountains, U.S.A. Soil. Biol. Biochem. 30: 853-864. Aulakh, M.S., Doran, J.W., Walters, D.T., Mosier, A.R., Francis, DD. 1991. Crop residue type and placement effects on denitrification and minerlization. Soil. Sci. Soc. Am J. 55: 1020-1025. PENGARUH PEMBERIAN PUPUK HAYATI PENAMBAT NITROGEN PADA EMISI GAS N2O DI PERTANIAN LAHAN KERING ENDAH RETNANINGRUM Universitas Gadjah Mada, 2014 | Diunduh dari http://etd.repository.ugm.ac.id/

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DAFTAR PUSTAKA

Adisarwanto, T. & Widyastuti, Y.E. 2004. Meningkatkan Produksi Jagung di Lahan Kering, Sawah, dan Pasang Surut. Penebar Swadaya. Jakarta.

Adviento-Borbe, M.A.A., Haddix, M.L., Binder, D.L., Walters, D.T. & Dobermann, A., 2007. Soil greenhouse gas fluxes and global warming potential in four high-yielding maize systems. Global. Change. Biol. 13: 1972-1988.

Adisyahputra, Indrayanti, R. & Eldina, D. 2004. Karakterisasi sifat toleransi terhadap cekaman kering kacang tanah (Arachis hypogaea L.) varietas nasional pada tahap perkecambahan. J. Matematika Sains Teknologi. 5: 1-11.

Akiyama, H., Tsuruta, H. & Watanabe, T. 2000. N2O and NO emissions from soils after application of different chemical fertilizers. Chemosphere. Global Change. Sci. 2: 313-320.

Alvarado, P. & Manjon, J.L. 2009. Selection of enzymes for terminal restriction fragment length polymorphism analysis of fungal internally transcribed spacer sequences. Appl. Environ. Microbiol. 75: 4747-4752.

Amann, R.L., Ludwig, W. & Schleifer, K.H. 1995. Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol. Rev. 59: 143-169.

Anderson, J.M. & Ingram, J.S.I. 1993. Colorimetric determination of ammonium. In: Tropical Soil Biology and Fertility: A Handbook of Methods (J.M. Anderson & J.S.I. Ingram, eds). CAB International, Wallingford, UK. pp. 73-74.

Anonim. 1985. Standard Methods For The Examination of Water and Wastewater. 18ed. American Public Health Association., Washington. pp. 54-58.

Anonim, 2002. Agribisnis Jagung. Informasi dan Peluang. Festival Jagung Pangan Pokok Alternatif. Deptan. Istana Bogor. pp. 26-27.

Anonim. 2007. Climate Change 2007: The Physical Science Basis. Intergovernmental Panel On Climate Change (IPCC). The Fourth Assessment Report. Cambridge, UK, UNEP. University Press. pp: 996.

Anonim, 2013. Greenhouse Gas Emissions and Sinks. Environmental Protection Agency (EPA). Report. USA.

Antoun, H., Chantal, J., Goussard, N., Chapot, R. & Ialanele, R. 1998. Potential Rhizobium and Bradyrhizobium species on plant growth promoting rhizobacteria on non-legumes: effect on radishes (Raphanus sativius L.). Plant. Soil. 204: 57-67.

Asbhy, J.A., Bowden, W.B. & Murdoch, P.S. 1998. Controls on denitrification in riparian soils in headwater catchments of the hardwood forest in the Catskill Mountains, U.S.A. Soil. Biol. Biochem. 30: 853-864.

Aulakh, M.S., Doran, J.W., Walters, D.T., Mosier, A.R., Francis, DD. 1991. Crop residue type and placement effects on denitrification and minerlization. Soil. Sci. Soc. Am J. 55: 1020-1025.

PENGARUH PEMBERIAN PUPUK HAYATI PENAMBAT NITROGEN PADA EMISI GAS N2O DIPERTANIAN LAHAN KERINGENDAH RETNANINGRUMUniversitas Gadjah Mada, 2014 | Diunduh dari http://etd.repository.ugm.ac.id/

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197

Avis, T.J., Gravel, V., Antoun, H. & Tweddell, R.J. 2008. Multifaceted beneficial effects of rhizosphere microorganisms on plant health and productivity. Soil. Biol. Biochem. 40: 1733-1740.

Azam, F., Malik, K.A. & Hussain, F. 1986. Microbial biomass and mineralization-immobilization of nitrogen in some agricultural soils. Biol. Fertil.Soils. 2: 157-163.

Azcon, R. & Barea, J.M., 1976. Synthesis of auxins, gibberrellins and cytokinins by Azotobacter vinelandii and Azotobacter beijerinckii related to effects produced on tomato plants. Plant Soil. 43: 609-613.

Baggs, E.M., Rees, R.M., Smith, K.A. & Vinten, A.J.A. 2000. Nitrous oxide emission from soils after incorporating crop residues. Soil Use Manage. 16: 82–87.

Baggs, E. M. & Blum, H. 2004. CH4 oxidation and CH4 and N2O emissions from Lolium perenne swards under elevated atmospheric CO2. Soil Biol. Biochem. 36: 713-723.

Baggs, E.M., Chebii, J. & Ndufa, J.K., 2006. A short-term investigation of trace gas emissions following tillage and no-tillage of agroforestry residues in western Kenya. Soil Till. Res. 90: 69-76.

Bai, Y., Zhou, X. & Smith, D.L. 2003. Enhanced soybean plant growth resulting from coinoculation of Bacillus strains with Bradyrhizobium japonicum. Crop. Ecol. Manage. Qual. Crop Sci. 43: 1774-1781.

Bakayoko, S., Soro, D., Nindjin., Dao, D., Tschannen, A., Girardin, O. & Assa, A. 2009. Effects of cattle and poultry manures on organic matter content and adsorption complex of a sandy soil under cassava cultivation (Manihot esculenta. Crantz). Afr. J. Environ. Sci. Technol. 3: 190-197.

Bakhri, S. 2007. Budidaya Jagung dengan Konsep Pengelolaan Tanaman Terpadu (PTT). Balai Pengkajian Teknologi Pertanian (BPTP) Sulawesi Selatan.

Bakken, L.R. & Lindahl, V. 1995. Recovery of bacterial cells from soil. pp. 9-27. In: Nucleic Acids in the Environment: Methods and Applications. Van (J.D. Elsas & J.T. Trevors, eds). Springer-Verlag, Heidelberg, Germany.

Bakken, L.R. 1988. Denitrification under different cultivated plants: effects of soil moisture tension, nitrate concentration, and photosynthetic activity. Biol. Fertil. Soils. 6: 271-278.

Bakken, L. & Dorsch, P. 2007. Nitrous oxide emission and global warming. In: Nitrogen in the Environment: Sourcess, Problems, and Management. (J.L. Hatfields and J.L. Follet, eds). Elsevier. Inc. pp. 383-397.

Barak, P., Molina, J.A.E., Hadas, A. & Clapp, C.E. 1990. Mineralization of amino acids and evidence of direct assimilation of organic nitrogen. Soil Sci. Soc. Am. J. 54: 769-774.

Barea, J.M. & Brown, M.E. 1974. Effects of plant growth produced by Azotobacter paspali related to synthesis of plant growth regulating substances. J. Appl. Bacteriol. 37: 583-593.

Berendes, F., Gottschalk, G., HeinDobbernack, E., Moore, E. R. B. & Tindall, B. J. 1996. Halomonas desiderata sp nov, a new alkaliphilic, halotolerant,

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198

and denitrifying bacterium isolated from a municipal sewage works. Syst. Appl. Microbiol. 19:158-167.

Beauchamp, E.G., 1997. Nitrous oxide emission from agricultural soils. Can. J. Soil Sci.77: 113-123.

Beaumont, H. J. E., van Schooten, B., Lens, S. I., Westerhoff, H. V. & Van Spanning, R. J. M. 2004. Nitrosomonas europaea expresses a nitric oxide reductase during nitrification. J. Bacteriol. 186:4417-4421.

Belser., L.W. 1979. Population ecology of nitrifying bacteria. Ann Rev. Microbiol. 33: 309-333.

Berg, L.R. 2008. Introductory Botany : Plants, People, and the Environment. 2nd ed. (P. Adams, K. Hopperstead, L. Oliveira, R. Barlow, eds). Thomson Higher Education. Davis Drive. Belmount. California. pp. 15-20.

Berg, P., Klemedtsson, L. & Rosswall, T. 1982. Inhibitory effect of low partial pressures of acetylene on nitrification. Soil Biol.Biochem. 14: 301-303.

Bertelsen, F. & Jensen, E.S. 1992 Gaseous nitrogen losses from field plots grown with pea (Pisum sativum L.) or spring barley (Hordeum vulgare L.) estimated by 15N mass balance and acetylene inhibition techniques. Plant Soil. 142: 287-295.

Bickle T. A. & Kruger, D. H. 1993 Biology of DNA restriction. Microbiol. Rev. 57: 434–450.

Bijay-Singh, J.C., Ryden, A. & Whitchhead, D.C. 1988. Some relationships between denitrification potential and fractions of organic carbon in air dried and field-moist soils. Soil Biol.Biochem. 20: 737-741. http://dx.doi:10.1016/0038-0717(88)90160-5

Biswas, J.C., Ladha, J.K., Dazzo, F.B., Yanni, Y.G. & Rolfe, B.G. 2000. Rhizobial inoculation influences seedling vigor and yield of rice. Agron. J. 92: 880-886.

Blau, K. & Halket, J.M. 1993. Handbook of derivates for Chromatography. Wiley. Chichester. pp. 175-213.

Boddey, R. M., Polidoro, J.C., Resende, A.S., Alves, B.J.R. & Urquiaga, S. 2001. Use of the 15N natural abundance technique for the quantification of the contribution of N2 fixation to sugar cane and other grasses. Aust. J. Plant Physiol. 28: 889-295.

Bohn, H., McNeal, L. & G .A. & O'Connor, G.A. 1985. Soil Chemistry. John Wiley and Sons, New York. Chicester, Brisbane, Toronto .

Bollman, A. & Conrad, R., 1998. Influence of O2 availability on NO and N2O release by nitrification and denitrificationin soils. Global Change Biol. 4: 387–396.

Borneman, J., Skroch, P.W., O'Sullivan, K.M., Palus, J.A., Rumjanek, N.G., Jansen, J.L., Nienhuis, J. & Triplett, E.W. 1996. Molecular microbial diversity of an agricultural soil in Wisconsin. Appl. Environ. Microbiol. 62: 1935-1943.

Bothe, H. & Ferguson, S.J. 2007. Biology of Nitrogen Cycles, Elsevier. Bouwman, A.F. 1990. Exchange of greenhouse gases between terrestrial

ecosystems and the atmosphere. In: Soils and the Greenhouse Effect (A.F. Bouwman, ed). John Wiley & Sons, New York. pp. 61-127.

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199

Bradley, W .B . & Sieling, D.H. 1983 . Effect of Organic anion and sugars in phosphate precipitation by iron and aluminium as influence by pH. Soil Sci . Am . J. 76:23-34.

Braker, G., Zhou, J., Wu, L., Devol, A.H. & Tiedje, J.M. 2000. Nitrite reductase genes (nirK and nirS) as functional markers to investigate diversity of denitrifying bacteria in Pacific Northwest marine sediments communities. Appl. Environ. Microbiol. 66: 2096-2104.

Braker, G., Ayala-Del-Rio, H.L., Devol, A.H., Fesefeldt, A. & Tiedje, J.M., 2001. Community structure of denitrifiers, bacteria, and archaea along redox gradients in Pacific North-west marine sediments by terminal restriction fragment length polymorphism analysis of amplified nitrite reductase (nirS) and 16S rRNA genes. Appl. Environ. Microbiol. 67: 1893-1901.

Brentrup, F., Kusters, J., Lammel, J. & Kuhlmann, H. 2000. Methods to estimate on field nitrogen emissions from crop production as an input to LCA studies in the agricultural sector. Int. J. Life Cycle Assessment. 5: 349-357.

Bremner, J. M. 1997. Sources of nitrous oxide in soils. Nutr. Cycl. Agroeco. 49:7-16.

Brown, M.E. & Burlingham, S.K. 1968. Production of plant growth substances by Azotobacter chroococcum. J. Gen. Microbiol. 53: 135-144.

Bruce, K.D., 1997. Analysis of mer gene subclasses within bacterial communities in soils and sediments resolved by fluorescent PCR restriction fragment length polymorphism profiling. Appl. Environ. Microbiol. 63: 4914-4919.

Budiono. 2003. Potensi Pengembangan Tanaman Pangan Berdasarkan Zona Agroeksosistem: Kasus di Playen dan Wonosari, Yogyakarta. Buletin Teknik Pertanian. 8: 41-46.

Burgmann, H.M., Pesaro, F., Widmer, J. & Zeyer, A. 2001. Strategy for optimizing quality and quantity of DNA extracted from soil. J. Microbiol. Methods. 45: 7-20.

Caetano-Annoles, G., Bassam, B.J. & Gresshoff, P.M. 1991. DNA amplification fingerprinting using very short arbitrary oligonucleotide primers. Biotechnology. 9: 553-557.

Cameron, K.C., Di, H.J. & Moir, J.L. 2013. Nitrogen losses from the soil/plant system: a review. Annals. Appl. Biol. 162: 145-173.

Carmo, J.B., Neill, C., Garcia-Monti, M., de Cassia Piccolo, M., Cerri, C.C., Steudler, P.A., de Andrade, C.A., Passianoto, C.C., Feigl, B.J. & Melillo, J.M. 2005. Nitrogen availability and N2O fluxes from pasture soil after herbicide application. Revista Brasileira de Ciencia do Solo. 29: 735-746.

Castignetti, D. 1990. Bioeenergetic examination of heterotrophic nitrifier-denitrifier Thiospaera pantotropha. Antonie van Leeuwenhoek. 58: 283-289.

Cataldo, D.A., Haroon, M., Schrader, L.E. & Young, V. 1975. Rapid colorimetric determination of nitrate in plant tissue by nitration of salicylic acid. Commun. Soil Sci. Plant Anal. 6: 71-80.

PENGARUH PEMBERIAN PUPUK HAYATI PENAMBAT NITROGEN PADA EMISI GAS N2O DIPERTANIAN LAHAN KERINGENDAH RETNANINGRUMUniversitas Gadjah Mada, 2014 | Diunduh dari http://etd.repository.ugm.ac.id/

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200

Cavigelli, M.A & Robertson, G.P. 2000. The functional significance of denitrifier community composition in a terrestial ecosystem. Ecol. 81: 1402-1414.

Cavigelli, M.A & Robertson, G.P. 2001. Role of denitrifier diversity in rates of nitrous oxide consumption in a terrestrial ecosystem. Soil. Biol. Biochem. 33:297-310.

Chalk, P.M. 1998. Dynamics of biologically fixed N in legume–cereal rotations: a review. Aust J Agric Res. 49: 303-316.

Cariello, N. F., Scott, J.K., Kat, A.G. & Thilly, W.G. 1988. Resolution of a missense mutant in human genomic DNA by denaturing gradient gel electrophoresis and direct sequencing using in vitro DNA amplification: HPRT Munich. Am. J. Hum. Genet. 42: 726-734.

Carter, J. P., Hsaio, Y. H., Spiro, S. & Richardson, D. J. 1995. Soil and sediment bacteria capable of aerobic nitrate respiration. Appl. Environ. Microbiol. 61: 2852-2858.

Chen, M. Y., Tsay, S. S., Chen, K. Y., Shi, Y. C., Lin, Y. T. & Lin, G. H. 2002. Pseudoxanthomonas taiwanensis sp. nov., a novel thermophilic, N2O-producing species isolated from hot springs. Int. J. Syst. Bacteriol. 52: 2155-2161.

Cheneby, D., Perrez, S., Devroe, C., Hallet, S., Couton, Y., Bizouard, F., Iuretig, G., Germon, J. C. & Philippot, L. 2004. Denitrifying bacteria in bulk and maize-rhizospheric soil: Diversity and N2O-reducing abilities. Can. J. Microbiol. 50: 469-474.

Cheng, X. D., Zhang, J.F., Yang, L., Xu, X.L., Liu, J.Y., Yu, W.B., Su, M.Q. & Hao, X.K. 2007. A new multi-PCR-SSCP assay for simultaneous detection of isoniazid and rifampin resistance in Mycobacterium tuberculosis. J.Microbiol.Methods. 70: 301–305.

Chon, K., Chang, J., Lee, E., Lee, J., Ryu, J. & Cho, J. 2009. Abundance of denitrifying genes coding for nitrate (narG), nitrite (nirS), and nitrous oxide (nosZ) reductases in estuarine versus wastewater effluent fed constructed wetlands. Ecol .Eng. 4: 6-19.

Christensen, S. 1992. Decomposability of recalcitrant soil carbon assessed by denitrification. FEMS. Microbiol. Lett. 86: 267–274.

Clegg, C. D., Ritz, K. & Griffiths, B.S. 1997. Direct extraction of microbial community DNA from humified upland soils. Lett. Appl. Microbiol. 25: 30–33.

Clement, B.G., Kehl, L.E., DeBord, K.L. & Kitts, C.L.1998. Terminal restriction fragment patterns (TRFPs), a rapid, PCR-based method for the comparison of complex bacterial communities. J. Microbiol. Methods. 31: 135-142.

Cortons, T.M., Bajita, J.B., Grospe, F.S., Pamplona, R.R., Aziz, J.C.A, Wassmann, R., Lantin, R.S. & Buendina, L.V. 2000. Methane emission from irrigated and intensively managed rice fields in Central Luzon, Philippine. Nutr. Cycl. Agroeco. 58: 37-53.

Coyne, M.S. & Focht, D.D. 1987. Nitrous oxide reduction in nodules:denitrification or N2 fixation? Appl. Environ. Microbiol. 53: 1168-1170.

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Page 6: PERTANIAN LAHAN KERING ENDAH RETNANINGRUM 196etd.repository.ugm.ac.id/downloadfile/77543/potongan/S3-2014-306466... · 196 DAFTAR PUSTAKA Adisarwanto, T. & Widyastuti, Y.E. 2004.

201

Crews, T.E. & Peoples, M.B. 2005. Can the synchrony of nitrogen supply and crop demand be improved in legume and fertilizer based agroecosystems? A review. Nutr. Cycl. Agroecosyst. 72: 101-120.

Crutzen, P. & Oppenheimer, M. 2008. Learning about ozone depletion. Climatic Change. 89: 143-145.

Cullen, D.W. & Hirsch, P.R. 1998. Simple and rapid method for direct extraction of microbial DNA from soil for PCR. Soil. Biol. Biochem. 30: 983-993.

Culman, S., Bukowski, R., Gauch, H., Cadillo-Quiroz, H. & Buckley, D. 2009. T-REX: software for the processing and analysis of T-RFLP data. BMC Bioinformatics. 171: 1-10.

Curtis, T.P. & Sloan, W.T. 2005. Exploring microbial diversity and a vast below. Sci. 309: 1331-1333.

Dalal, R.C., Gibson, I., Allen, D.E. & Menzies, N.W. 2010. Green waste compost reduces nitrous oxide emissions from feedlot manure applied to soil. Agric. Ecosyst. Environ. 136: 273–281.

Dambreville, C., Morvan, T. & Germon, J. 2008. N2O emission in maize-crops fertilized with pig slurry, matured pig manure or ammonium nitrate in Brittany. Agric. Ecosys. Environ. 123: 201-210.

Danovaro, R., Luna, G.M., Dell’Anno, A., Pietrangeli, B. 2006. Comparison of two fingerprinting techniques, terminal restriction fragment length polymorphism and automated ribosomal intergenic spacer analysis, for determination of bacterial diversity in aquatic environments. Appl. Environ. Microbiol. 72: 5982-5989.

Danbing, K., Menard, C., Picard, F.J., Boissinot, M., Ouellette, M., Roy, P.H. & Bergeron, M.G. 2000. Development of conventional and real-time PCR assays for the rapid detection of group B Streptococci. Clin. Chem. 46: 324-331.

Dao, T. H. & Cavigelli, M. A. 2003. Mineralizable carbon, nitrogen, and water-extractable phosphorus release from stockpiled and composted manure and manure-amended soils. Agronomy. J. 95: 405-413.

Davidson, E.A. 1993. Soil water content and the ratio of nitrous oxide to nitric oxide emitted from soils. Nutr. Cycl. Agroecosys. 48: 37-50.

Davidson, E.A., Swank, W.T. 1986. Environmental parameters regulating gaseous nitrogen losses from 2 forested ecosystems via nitrification and denitrification. Appl. Environ. Microbiol. 52: 1287-1292.

Davidson, E.A., Swank, W.T. & Perry, T.O. 1986. Distinguishing between nitrification and denitrification as sources of gaseous nitrogen production in soil. Appl. Environ. Microbiol. 52: 1280-1286.

Davidson, E.A., Keller, M., Erickson, H.E., Verchot L.V. & Veldkamp, E. 2000. Testing a conceptual model of soil emissions of nitrous and nitric oxides. Biol. Science. 50: 667-680.

De Klein, C.A.M. & Van Logtestijn, R.S.P. 1994. Denitrification and N2O emission from urine affected grassland soils. Plant Soil. 163: 235-242.

De Klein, C.A.M. & Eckard, R.J. 2008. Targetted technologies for nitrous oxide abatement from animal agriculture. Aust. J. Experiment. Agric. 48: 14-20.

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202

Delgado, J.A. & Mosier, A.R., 1996. Mitigation alternatives to decrease nitrous oxides emissions and urea-nitrogen loss and their effect on methane flux. J. Environ. Qual. 25: 1105-1111.

Denarie, J. & Cullimore, J. 1993. Lipooligosaccharide nodulation factors: A new class of signaling molecules mediating recognition and morphogenesis. Cell. 74: 951-954.

Denmead, O., Macdonald, B., Bryant, G., Naylor, T., Wilson, S., Griffith, D., Wang, W., Salter, B., White, I. & Moody, P. 2010. Emissions of methane and nitrous oxide from Australian sugarcane soils. Agric. Forest Meteorology. 150: 748-756.

Dendooven, L., Duchateau, L. & Anderson, J.M. 1996. Gaseous products of the denitrification process as affected by the antecedent water regime of the soil. Soil Biol. Biochem. 28: 239-245.

Denman, K.L., Brasseur, A., Chidthaisong, P., Ciais, P., Cox, P.M., Dickinson, R.E., Hauglustaine, D., Heinze, C., Holland, E., Jacob, D., Lohmann, U., Ramachandran, S., da silva Dias, P.L., Wofsy, S.C. & Zhang, X. 2007. Couplings between changes in the climate system and biochemistry. In: Climate Change 2007: The Physical Science Basis. Contribution of Working Group I to The Fourth Assesment Report of the Intergovernmental Panel On Climate Change (S. Solomon, D. Qin, M. Maning, Z. Chen, M. Marquis, K.B. Averyt, M. Tignor & H.L. Miller, eds).Cambridge University Press, Cambridge, United Kingdom.

Dittert, K., Bol, R., King, R., Chadwick, D. & Hatch, D. 2001. Use of a novel nitrification inhibitor to reduce nitrous oxide emission from 15N-labelled dairy slurry injected into soil. Rapid Commun. Mass Spectrom. 15: 1291-1296.

Dobbelaere, S., Vanderleyden, J., Okon, Y., 2003. Plant growth-promoting effects of diazotrophs in the rhizosphere. Critical Rev. Plant. Sci. 22: 107-149.

Duan, J., Muller, K., Charles, T., Vesely, S. & Glick, B. 2009. 1-Aminocyclopropane-1-carboxylate (ACC) deaminase genes in rhizobia from Southern Saskatchewan. Microb. Ecol. 57: 423-436.

Dudeja, S.S. & Khurana, A.L. 1988. Persistence of Bradyrhizobium sp. (Cajanus) in a sandy loam. Soil Biol. Biochem. 21: 709-713.

Dunbar, J., Ticknor, L.O. & Kuske, C.R. 2000. Assessment of microbial diversity in four southwestern United States soils by 16S rRNA gene terminal restriction fragment analysis. Appl. Environ. Microbiol. 66: 2943-2950.

Dunbar, J., Ticknor, L.O. & Kuske, C.R. 2001. Phylogenetic specificity and reproducibility and new method for analysis of terminal restriction fragment profiles of 16S rRNA genes from bacterial communities. Appl. Environ. Microbiol. 67: 190-197.

Duxbury, J. M. Harper, L.A. & Mosier, A.R. 1993. Contribution of agroecosystem to global climate change. In: Agricultural Ecosystem Effects on Trace Gases and Global Climate Change (L.A. Harper, A.R. Mosier, J.M. Duxbury & Roltson, D.E, eds). American Society of Agronomy, Inc., Madison, Wiconsin. pp. 1-18.

Duxbury, J. M. & Mosier, A.R. 1997. Status and issues concerning agricultural

PENGARUH PEMBERIAN PUPUK HAYATI PENAMBAT NITROGEN PADA EMISI GAS N2O DIPERTANIAN LAHAN KERINGENDAH RETNANINGRUMUniversitas Gadjah Mada, 2014 | Diunduh dari http://etd.repository.ugm.ac.id/

Page 8: PERTANIAN LAHAN KERING ENDAH RETNANINGRUM 196etd.repository.ugm.ac.id/downloadfile/77543/potongan/S3-2014-306466... · 196 DAFTAR PUSTAKA Adisarwanto, T. & Widyastuti, Y.E. 2004.

203

emissions of greenhouse gases. In: Agricultural Dimensions of Global Climate Change (H.M. Kaiser & T.E. Drennen, eds). CRC Press LLC.

Ercolini, D. 2004. PCR-DGGE fingerprinting: novel strategies for detection of microbes in food. J. Microbiol. Methods. 56: 297-314.

Edmeades, G.O., M. Banziger, M. & Ribaut, J.M. 2000. Maize improvement for drought-limited environments. In: Physiological Bases for Maize Improvement (M.E. Otegui & G.A. Slafer, eds). Food Products Press, New York. pp.75-111.

El-Kholy, M.A. & Gomaa, A.M. 2000. Biofertilizers and their impact on forage yield and N-content of millet under low level of mineral fertilizers. Annals. Agric. Sci. 38: 813-822.

Engebretson, J. J. & Moyer, C.L. 2003. Fidelity of select restriction endonucleases in determining microbial diversity by terminal restriction fragment length polymorphism. Appl. Environ. Microbiol. 69:4823-4829.

Enwall, K.,Throback, I.N.,Stenberg, M., Soderstrom, M. & Hallin, S. 2010. Soil resources influence spatial patterns of denitrifying communities at scales compatible with land management. Appl. Environ. Microbiol. 76: 2243-2250.

Epstein, E. & Bloom, A.J. 2004. Mineral Nutrition of Plants: Principles and Perspectives. 2 nd edition. Sinauer Associates Publishers, Sunderland, MA.

Fahrbach, M., Kuever, J., Meinke, R., Ka¨mpfer, P., and Hollander, J. 2006. Denitratisoma oestradiolicum gen. nov., sp. nov., a 17B-oestradiol-degrading, denitrifying betaproteo-bacterium. Int. J. Syst. Evol. Microbiol. 56: 1547-1552.

Faronika, M., Siregar, L.A.M., Hasyim, H. 2013. Evaluasi produktivitas dan kualitas beberapa varietas tanaman kacang tanah (Arachis hypogaea L.) di tanah bertekstur liat. Agroekoteknologi. 1: 201-213

Fedi, S., Tremaroli, V., Scala, D., Perez-Jimenez ,J.R., Fava, F. & Zannoni, D. 2005. T-RFLP analysis of bacterial communities in cyclodextrin-amended bioreactors developed for biodegradation of polychlorinated biphenyls. Research Microbiol. 156: 201-210.

Fillery, I.R.P. 2001. The fate of biologically fixed nitrogen in legume-based dryland farming systems: a review. Aust. J. Exp. Agric. 41: 361-381.

Finkmann, W., Altendorf, K., Stackebrandt, E. & Lipski, A. 2000. Characterization of N2O-producing Xanthomonas-like isolates from biofilters as Stenotrophomonas nitritireducens sp. nov., Luteimonas mephitis gen. nov., sp. nov. and Pseudoxanthomonas broegbernensis gen. nov., sp. nov. Int. J. Syst. Evol. Microbiol. 50: 273-282.

Firestone, M.K., Firestone, R.B. & Tiedje, J.M. 1980. Nitrous oxide from soil denitrification: Factors controlling its biological production. Science. 208:749-751.

Firestone, M.K. 1982. Biological denitrification. In: Nitrogen Agricultural Soils (F.J. Stevensen, ed). Agronomy Society of America, Madson.

Firestone, M.K. & Davidson, E.A. 1989. Microbiological basis of NO and N2O production and consumption in soil. In: Exchange of Trace Gases

PENGARUH PEMBERIAN PUPUK HAYATI PENAMBAT NITROGEN PADA EMISI GAS N2O DIPERTANIAN LAHAN KERINGENDAH RETNANINGRUMUniversitas Gadjah Mada, 2014 | Diunduh dari http://etd.repository.ugm.ac.id/

Page 9: PERTANIAN LAHAN KERING ENDAH RETNANINGRUM 196etd.repository.ugm.ac.id/downloadfile/77543/potongan/S3-2014-306466... · 196 DAFTAR PUSTAKA Adisarwanto, T. & Widyastuti, Y.E. 2004.

204

between Terrestrial Ecosystems and the Atmosphere (M.O. Andreae, & D.S. Schimel, eds).Wiley, Chichester. pp: 7-21.

Fischer, S. G. & Lerman, L.S. 1979. Length-independent separation of DNA restriction separation of DNA restriction fragments in two dimensional gel electrophoresis. Cell. 16: 191-200.

Fisher, M.M. & Triplett, E.W. 1999. Automated approach for ribosomal intergenic spacer analysis of microbial diversity and its application to freshwater bacterial communities. Appl. Environ. Microbiol. 65: 4630-4636.

Flynn, H.C., Smith, J., Smith, K.A., Wright, J., Smith, P. & Massheder, J. 2005. Climate and crop responsive emission factors significantly alter estimates of current and future nitrous oxide emissions from fertilizer use. Global Change Biol. 11: 1522-1536. http://dx.doi.org/10.1111/j.1365-2486.2005.00998.x

Follet, R.F. 2008. Transformation and transport processes of nitrogen in agriculture systems. In: Nitrogen in the Environment: Sources, Problems, and Management (J.L. Hatfields & R.F. Follet, eds). Elsevier. Inc. pp: 19-50.

Franklin, R.B., Taylor, D.R. & Mills, A.L. 1999. Characterization of microbial communities using randomly amplified polymorphic DNA (RAPD). J. Microbiol.Methods. 35: 225-235.

Freney., J.R. & Black, A.S. 1988. Importance of amonia volatilization as a loss process. In: Advances in Nitrogen Cycling in Agricultural Ecosystems (J.R. Wilson, ed). CAB. International, Wallingford, U.K. pp. 156-173.

Fries, M. R., Zhou, J., Chee-Sanford, J. & Tiedje, J. M. 1994. Isolation, characterisation, and distribution of denitrifying toluene degraders from a variety of habitats. Appl. Environ. Microbiol. 60: 2802-2810.

Frostegard, A., Cortouis, S., Ramisse, V., Clerc, S., Bernillon, D., Le Gall, F., Jeannin, P., Nesme, X. & Simonet, P. 1999. Quantification of bias related to the extraction of DNA directly from soils. Appl. Environ. Microbiol. 65: 5409-5420.

Fu, S. & Cheng, W. 2002. Rhizosphere priming effects on the decomposition of soil organic matter in C4 and C3 grassland soils . Plant Soil. 238: 289-294.

Gans, J., Wolinsky, M. & Dunbar, J., 2005. Computational improvements reveal great bacterial diversity and high metal toxicity in soil. Sci. 309: 1387-1390.

Genney, D.R., Anderson, I.C. & Alexander, I.J. 2006. Fine scale distribution of pine ectomycorrhizas and their extramatrical mycelium. New Phytol. 170: 381-390.

Glasel, J.A. 1995. Validity of nucleic acid purities monitored by A260/A280 absorbance ratios. Biotech. 18: 62-63.

Glockner, A. B., Jungst, A. & Zumft, W. G. 1993. Copper-containing nitrite reductase from Pseudomonas aurofaciens is functional in a mutationally cytochrome cd1 free background (NirS) of Pseudomonas stutzeri. Arch. Mircobiol. 160: 18-26.

PENGARUH PEMBERIAN PUPUK HAYATI PENAMBAT NITROGEN PADA EMISI GAS N2O DIPERTANIAN LAHAN KERINGENDAH RETNANINGRUMUniversitas Gadjah Mada, 2014 | Diunduh dari http://etd.repository.ugm.ac.id/

Page 10: PERTANIAN LAHAN KERING ENDAH RETNANINGRUM 196etd.repository.ugm.ac.id/downloadfile/77543/potongan/S3-2014-306466... · 196 DAFTAR PUSTAKA Adisarwanto, T. & Widyastuti, Y.E. 2004.

205

Gober, J.W. & Kashket, E.R. 1983. Methylammonium uptake by Rhizobium sp. strain 32H1. J. Bacteriol. 153: 1196-1201.

Godfrey, P.D., Brown, R.D. & Andrew, A.N. 1997. The shape of urea. J. Mol. Structure. 413: 405-414.

Gomes, J. Bayer, C., Costa,F.S, Piccolo M .C., Zanatta , J.A., Vieira , F.C.B. & Six, J. 2009. Soil nitrous oxide emissions in long-term cover crops-based rotations under subtropical climate. Soil. Till. Res. 106: 164. http://dx.doi:10.1016/j.still.2009.10.001

Gomez, E., Ferreras, L. & Toresani, S. 2006. Soil bacterial functional diversity as influenced by organic amendment application. Biores.Technol. 97: 1484-1489.

Gordon, J.K. & Moore, R.A. 1981. Ammonium and methylammonium transport by the nitrogen-fixing bacterium Azotobacter vinelandii. J. Bacteriol. 148: 435-442.

Goreau, T. J., Kaplan, W.A., Wosfy, S.C., Mcelroy, M. B., Valois, F. W. & Watson, S. W. 1980. Production of NO2

- and N2O by nitrifying bacteria at reduced concentrations of oxygen. Appl. Environ. Microbiol. 40: 526-532.

Granger, J. & Ward, B.B. 2003. Accumulation of nitrogen oxides in copper limited culture of denitrifying bacteria. Limnol. Oceanol. 48: 313.

Granli T & Bockman, O.C. 1994. Nitrous oxide from agriculture. Norw. J. Agric. Sci. 12: 22- 42.

Grant, R.F. 1998. Simulation in ecosystem of root growth response to contrasting soil water and nitrogen. Ecol. Modeling. 107: 237-264.

Greenan, N. S., Mulvaney R.L. & Sims, G.K. 1995. A microscale method for colorimetric determination of urea in soil extracts. Communications. Soil. Sci. Plant. Analysis. 26: 2519-2529.

Gregorich, E.G., Rochette, P., Van den Bygaart, A.J. & Angers, D.A. 2005. Greenhouse gas contributions of agricultural soils and potential mitigation practices in Eastern Canada. Soil Till. Res. 83: 53-72.

Groffman, P.M., Tiedje, J.M., Robertson, G.P. & Christensen, S. 1988. Denitrification at different temporal and geographical scales: proximal and distal controls. In: Advances in Nitrogen Cycling in Agricultural Ecosystems (J.R. Wilson, ed.). CAB International, Wallingford, UK. pp. 174-192.

Gumaelius, L., Magnusson, G., Pettersson, B., and Dalhammar, G. 2001. Comamonas denitrificans sp. nov., an efficient denitrifying bacterium isolated from activated sludge. Int. J. Syst. Bacteriol. 51: 999-1006.

Hadi, F. & Bono, A. 2010. Effect of diazotrophs (Rhizobium and Azotobacter) on growth of maize (Zea mays L.) and a accumulation of lead (Pb) in different plants parts. Pakistan J. Bot. 42: 4363-4376.

Hadijah, A.D. & Zaini, Z. 2010. Keragaan agronomi dan ekonomi sistem usahatani jagung hibrida di Sulawesi Selatan. Prosiding Pekan Serealia Nasional. pp. 627-637.

Hadrys, H., Balick, M. & Schierwater, B. 1992. Applications of random amplified polymorphic DNA (RAPD) in molecular ecology. Mol .Ecol. 1: 55-63.

PENGARUH PEMBERIAN PUPUK HAYATI PENAMBAT NITROGEN PADA EMISI GAS N2O DIPERTANIAN LAHAN KERINGENDAH RETNANINGRUMUniversitas Gadjah Mada, 2014 | Diunduh dari http://etd.repository.ugm.ac.id/

Page 11: PERTANIAN LAHAN KERING ENDAH RETNANINGRUM 196etd.repository.ugm.ac.id/downloadfile/77543/potongan/S3-2014-306466... · 196 DAFTAR PUSTAKA Adisarwanto, T. & Widyastuti, Y.E. 2004.

206

Hammad, H.M., Ahmad, A., Wajid, A. & Roll, A. J. 2011. Maize response to time and rate of nitrogen application. Pak.J. Bot. 43: 1935-1942

Hao, X., Chang, C., Carefoot, J.M., Janzen, H.H. & Ellert, B.H. 2001. Nitrous oxide emissions from an irrigated soil as affected by fertilizer and straw management. Nutrient Cycl. Agroecosys. 60: 1-8.

Harris, W. & Daniel, C. 1999. Gas chromatography. In: Quantitative Chemical Analysis (W.H. Freeman, ed). Freeman Co Company, Sao Paulo, Amerika. pp: 675-712.

Hattori, T. 1988. Soil aggregates as microhabitats of microorganisms. Biol. Fertil. Soils. 6: 189-203.

Hayashi, K.1991. PCR-SSCP: a simple and sensitive method for detection of mutations in the genomic DNA. PCR Methods Appl. 1: 34-38.

Haynes, R. J. & Naidu, R. 1998. Influence of lime, fertilizer andmanure applications on soil organic matter content and soil physical conditions: a review. Nutr. Cycl Agroecosyst. 51: 123-137.

Hebert, Y., Guingo, E. & Loudet, O. 2001. The response of root/shoot partitioning and root morphology to light reduction in maize genotypes. Crop Sci. 41: 363-371.

Hegazi, N.A., Fayez, M., Amin, G., Hamza, M.A., Abbas, M., Youssef, H. & Monib, B. 1998. Diazotrophs associated with non-legumes grown in sandy soils. In: Nitrogen Fixation With Non-Legumes (K.A. Malik, K.A., Mirza, M.S. & J.K. Ladha, eds). Kluwer Academic Publishers, Dordrecht. pp. 209-222.

Hein, I., Klein, D., Lehner, A., Bubert, A., Brandl, E. & Wagner, M. 2001. Detection and quantification of the iap gene of Listeria monocytogenes and Listeria innocua by a new real-time quantitative PCR assay. Research Microbiol. 152: 37-46.

Henry, S., Texier, S., Hallet, S., Bru, D., Dambreville, C., Cheneby, D., Bizouard, F., Germon, J.C. & Philippot, L. 2008. Disentangling the rhizosphere effect on nitrate reducers and denitrifiers: insight into the role of root exudates. Environ. Microbiol. 10: 3082-3092.

Heuer H., Krsek M., Baker P., Smalla K. & Wellington, E.M.H. 1997. Analysis of actinomycetes communities by specific amplification of genes encoding 16S rRNA and gel-electrophoretic separation in denaturing gradients. Appl. Environ. Microbiol. 63: 3233-3241.

Hirsch, P.R., Mauchline, T.H. & Clark, I.M. 2010. Culture-independent molecular techniques for soil microbial ecology. Soil. Biol. Biochem. 42: 878-887.

Hilton, J. C. & Rajagopalan, K.V. 1996. Identification of the molybdenum cofactor of dimethyl sulfoxide reductase from Rhodobacter sphaeroides f. sp. denitrificans as bis (molybdopterin guanine dinucleotide) molybdenum. Arch. Biochem. Biophys. 325: 139-143.

Hojberg, O., Binnerup, S.J. & Sorensen, J. 1996 Potential rates of ammonium oxidation, nitrate reduction and denitrification in the young barley rhizosphere. Soil Biol. Biochem. 28: 47-54. http://dx.doi:10.1016/0038-0717(95)00119-0

Hole, U. H., Vollack, K. U., Zumft, W. G., Eisenmann, E., Siddiqui, R. A.,

PENGARUH PEMBERIAN PUPUK HAYATI PENAMBAT NITROGEN PADA EMISI GAS N2O DIPERTANIAN LAHAN KERINGENDAH RETNANINGRUMUniversitas Gadjah Mada, 2014 | Diunduh dari http://etd.repository.ugm.ac.id/

Page 12: PERTANIAN LAHAN KERING ENDAH RETNANINGRUM 196etd.repository.ugm.ac.id/downloadfile/77543/potongan/S3-2014-306466... · 196 DAFTAR PUSTAKA Adisarwanto, T. & Widyastuti, Y.E. 2004.

207

Friedrich, B. & Kroneck, P. M. 1996. Characterization of the membranous denitrification enzymes nitrite reductase (cytochrome cd1) and copper-containing nitrous oxide reductase from Thiobacillus denitrificans. Arch. Microbiol. 165: 55-61.

Holtan-Hartwig, L., Dorsch, P. & Bakken, L.R. 2000. Comparison of denitrifying communities in organic soils: kinetics of NO and N2O reduction. Soil Biol. Biochem. 32: 833-843.

Holtan-Hartwig, L., Dorsch, P. & Bakken, L.R. 2002. Low temperature control of soil denitrifying communities: kinetics of N2O production and reduction. Soil Biol. Biochem. 34: 1797-1806.

Horn, M. A., Mertel, R., Gehre, M., Kastner, M. & Drake, H. L. 2006 .In vivo emission of dinitrogen by earthworms via denitrifying bacteria in the gut. Appl. Environ. Microbiol. 72: 1013-1018.

Hoshino, Y.T. & Matsumoto, N. 2004. An improved DNA extraction method using skim milk from soils that strongly adsorb DNA. Microbes Environ. 19: 13-19.

Hooper, A. B.1968. A nitrite-reducing enzyme from Nitrosomonas europaea. Preliminary characterization with hydroxylamine as electron donor. Biochim. Biophys. Acta. 162: 49-65.

Hua, X. Guangxi, X, Cai, Z. & Tsuruta, H. 1997. Nitrous oxide emissions from three rice fields in China. Nutr. Cycl. Agroeco. 49: 23-28.

Hugenholtz, P. 2002. Exploring prokaryotic diversity in the genomic era. Genome Biol. 3: 1-8.

Hullar,M.A.J., Kaplan, L.A. & Stahl, D.A. 2006 .Recurring seasonal dynamics of microbial communities in stream habits. Appl. Environ. Microbiol 72: 713-722.

Hutchinson, G.L. & Davidson, E.A. 1993. Processes for production and consumption of gaseous nitrogen oxides in soil. In: Agricultural Ecosystem Effects on Trace Gases and Global Climate Change (L.A. Harper, A.R. Mosier, J.M. Duxbury & D.E. Rolston, eds). Spec Publishers, Madison. pp. 79-93.

Hutchinson, G.L. & Mosier, A.R. 1981. Improved soil cover method for field measurement of nitrous oxide fluxes. Soil Sci. Soc. Am. J. 45: 311-316.

Hynes, R. & Knowles, R. 1978. Inhibition by acetylene of ammonia oxidation in Nitrosomonas europaea. FEMS Microbiol. Lett. 3:19-321.

Hynes, R. & Knowles, R. 1978. 1984. Production of nitrous oxide by Nitrosomonas europaea: effect of acetylene, pH, and oxygen. Can. J. Microbiol. 30: 1397-1404.

Ikeda, S., Watanabe, K.N., Minamisawa, K. & Ytow, N. 2004. Evaluation of soil DNA from arable land in Japan using modified direct extraction method. Microbes Environ. 19: 301-309.

Inubushi, K., Naganuma, H. & Kitahara, S. 1996. Contribution of denitrification and autotrophic and hetertrophic nitrification to nitrous oxide production in andosols. Biol. Fert. Soils. 23: 292-298.

Iruthayaraj, M.R. 1981. Let Azotobacter supply nitrogen to cotton. Intensive Agric. 19:23.

PENGARUH PEMBERIAN PUPUK HAYATI PENAMBAT NITROGEN PADA EMISI GAS N2O DIPERTANIAN LAHAN KERINGENDAH RETNANINGRUMUniversitas Gadjah Mada, 2014 | Diunduh dari http://etd.repository.ugm.ac.id/

Page 13: PERTANIAN LAHAN KERING ENDAH RETNANINGRUM 196etd.repository.ugm.ac.id/downloadfile/77543/potongan/S3-2014-306466... · 196 DAFTAR PUSTAKA Adisarwanto, T. & Widyastuti, Y.E. 2004.

208

Iwasaki, H., Shidara, S., Suzuki, H. & Mori, T. 1963. Studies on denitrification. Further purification and properties of denitrifying enzyme. J. Biochem. 53: 299-303.

Jain, M.C., S. Kumar, S., Wassmann, R., Mitra, S., Singh, S.D., Singh, J.P., Singh, R., Yadav, A.K. & Gupta, S. 2000. Methane emissiion from irrigated rice fields in Northern India, New Delhi. Nutr. Cycl.Agroeco. 58: 75-83.

Jensen, E.S. & Hauggaard-Nielsen, H. 2003. How can increased use of biological N2 fixation in agriculture benefit the environment? Plant Soil. 252: 177-186.

Johnson, D., Vandenkoornhuyse, P.J, Leake, J.R., Gilbert, L., Booth, R.E., Grime, J.P., Young, J.P.W. & Read, D.J. 2004 Plant communities affect arbuscular mycorrhizal fungal diversity and community composition in grassland microcosms. New Phytol. 161: 503-515.

Jones, S.K., Ress, R.M., Skiba, U.B. & Ball, B.C. 2007. Influence of organic and mineral N fertilizer on N2O fluxes from temperate grassland. Agric. Ecosyst. Environ. 121: 74-83.

Jumadi, O., Hala, Y., Muis A., Ali, A., Palennari, M., Yagi, K. & Inubushi, K. 2008. Influences of chemical fertilizers and a nitrification inhibitor on greenhouse gas fluxes in a corn (Zea mays L.) field in Indonesia. Microb. Environ. 23: 29-34.

Kanakidau, M., Keller, M., Melillo, J.M. & Zavaria, G.A. 1989. Trace gas exchange and the chemical and physical climate, critical interactions. In: Exchange of Trace Gases between Terrestrial Ecosystems and the Atmosphere (M.O. Andrea & D.S. Schimel, eds). John Wiley & Sons Ltd. Chichester. pp. 303-320.

Kandil, B.A.A., Badawi, F.S.F., El-Baz, M.G.M. & Abdel-Wahab, A.F.M. 2008. Response of peanut to inoculation with both Bradyrhizobium sp. and silicate bacteria (Bacillus circulans) under graded levels of feldspar amendment. J. Agric. Sci. 33: 4463-4477.

Kanungo, P.K., Ramakhrisnan, B. & Rao, V.P. 1997. Placement effect of organic sources on nitrogenase activity and nitrogen fixing bacteria in flooded rice soils. Biol. Fertil. Soils. 25 : 103-108.

Katsivela, E., Moore, E.R.B., Maroukli, D., Strompl, C., Pieper, D. & Kalogerakis, N. 2005. Bacterial community dynamics during in situ bioremediation of petroleum waste sludge in landfarming sites. Biodegradation. 16: 169-180.

Keeney, D.R., Fillery, I.R. & Marx, G.P. 1979. Effect of temperature on the gaseous nitrogen products of denitrification in a silt loam soil. Soil Sci. Soc. Amer. J. 43: 1124-1128. http://dx.doi.org/10.2136/sssaj1979.03615995004300060012x

Kennedy, I.R., Tchan, Y . 1992. Biological nitrogen fixation in noleguminous field crops: recent advances. Plant Soil. 141: 93-121.

Kennedy, I.R., Katupitiya, S., Yu, D., Gilchrist, K., Deaker, R., Pereg-Grek, L. & Wood, C.C. 1998. Prospects for facilitated evolution of effective N2 fixing associations with cerelas. In: Comparative Performance of

PENGARUH PEMBERIAN PUPUK HAYATI PENAMBAT NITROGEN PADA EMISI GAS N2O DIPERTANIAN LAHAN KERINGENDAH RETNANINGRUMUniversitas Gadjah Mada, 2014 | Diunduh dari http://etd.repository.ugm.ac.id/

Page 14: PERTANIAN LAHAN KERING ENDAH RETNANINGRUM 196etd.repository.ugm.ac.id/downloadfile/77543/potongan/S3-2014-306466... · 196 DAFTAR PUSTAKA Adisarwanto, T. & Widyastuti, Y.E. 2004.

209

Azozpirillum brasilense sp-7 with Various Free Living Diazotrophs Nitrogen Fixation with Non Legumes in Para Nodulated Wheat (K.A. Malik, M.S. Mirza & J.K. Ladha, eds). Kluwer Academic Publihers, Dordrecht. pp. 109-124.

Kennedy, I.R. Choudhury, A.T.M.A. & Kecskes, M.L. 2004. Non-simbiotic bacterial diazotrophs in crop-farming systems: can their potential for plant growth promotion be better exploited? Soil Biol. Biochem. 36: 1229-1244.

Kennedy, N., Edwards, S. & Clipson, N. 2005. Soil bacterial and fungal community structure across a range of unimproved and semi improved upland grasslands. Microb. Ecol. 50: 463-473.

Kester, R.A., De Boer, W. & Laanbroek, H.J. 1997. Production of NO and N2O by pure cultures of nitrifying and denitrifying bacteria during changes in aeration. Appl. Environ. Microbiol. 63: 3872-3877.

Khalil, K., Mary, B. & Renault, P. 2004. Nitrous oxide production by nitrification and denitrification in soil aggregates as affected by O2 concentration. Soil Biol. Biochem. 36: 687-699.

Khan, I.U. & Yadav, J.S. 2004. Real-time PCR assays for genus-specific detection and quantification of culturable and non culturable mycobacteria and pseudomonads in metalworking fluids. Mol. Cell. Probes. 18: 67-73.

Kheyrodin, H., Ghazvinian, K. & Taheriam, M. 2012. Tillage and manure effect on soil microbial biomass and respiration, and on enzyme activities. African J. Biotechnol. 11: 14652-14659

Kilian, S. & Werner, D. 1996. Enhanced denitrification in plots of N2 fixing faba beans compared to plots of a non fixing legume and non legumes. Biol. Fertil. Soils. 21: 77-83.

Kim, B. J., Lee, K.H., Yun, Y.J., Park, E.M., Park, Y.G., Bai, G.H., Cha, C.Y. & Kook, Y.H. 2004. Simultaneous identification of rifampin-resistant Mycobacterium tuberculosis and non tuberculous Mycobacteria by polymerase chain reaction-single strand conformation polymorphism and sequence analysis of the RNA polymerase gene (rpoB). J. Microbiol. Methods. 58: 111-118.

Kinney, C.A., Mandernack, K.W. & Mosier, A. 2005. Laboratory investigations into the effects of the pesticides,mancozeb ,chlorothalonil, and prosulfuron on nitrous oxide and nitricoxide production in fertilized soil. Soil Biol. Biochem. 5:837-850.

Kitts, C.L. 2001. Terminal restriction fragment patterns: a tool for comparing microbial communities and assessing community dynamics. Curr. Issues Intestinal Microbiol. 2: 17-25.

Kizawa, H.D., Tomura, M., Oda, A., Fukamizu, T., Hoshino, O., Gotoh, T., Yasui, T. & Shoun, H. 1991. Nucleotide sequence of the unique nitrate/nitrite inducible cytochrome P-450 cDNA from Fusarium oxysporium. J. Biol. Chem. 16: 10632-10637.

Klemedtsson, L., Svensson, B.H. & Rosswall, T. 1988. A method of selective inhibition to distinguish between nitrification and denitrification as sources of nitrous oxide in soil. Biol. Fert. Soils. 6: 112-119.

PENGARUH PEMBERIAN PUPUK HAYATI PENAMBAT NITROGEN PADA EMISI GAS N2O DIPERTANIAN LAHAN KERINGENDAH RETNANINGRUMUniversitas Gadjah Mada, 2014 | Diunduh dari http://etd.repository.ugm.ac.id/

Page 15: PERTANIAN LAHAN KERING ENDAH RETNANINGRUM 196etd.repository.ugm.ac.id/downloadfile/77543/potongan/S3-2014-306466... · 196 DAFTAR PUSTAKA Adisarwanto, T. & Widyastuti, Y.E. 2004.

210

Kloepper, J.W., Lifshitz, R. & Zablotowicz, R.M., 1989. Free-living bacteria inocula for enhancing crop productivity. Trends. Biotechnol. 7: 39-43.

Klose, S. & Tabatabai, M.A. 1998. Urease activity of microbial biomass in soils. Soil Biol. Biochem. 31: 2005-2011.

Knorr, W. 2009. Is the airborne fraction of anthropogenic CO2 emissions increasing? Geophisics. Res. Lett. 36: 21-30.

Knowles, R. 1982. Denitrification. Microbiol. Reviews. 46: 43-70. Ko, J.Y. & Kang, H.W. 2000. The effect of cultural practices on methane

emission from rice fields. Nutr .Cycl. Agroeco. 58: 311-314. Kohler, J., Caravaca, F., Carrasco, L. & Roldan, A. 2006. Contribution of

Pseudomonas mendocina and Glomus intraradicesto aggregates stabilisation and promotion of biological properties in rhizosphere soil of lettuce plants under field conditions. Soil Use Manage. 22: 298-304. http://dx.doi.org/10.1111/j.1475-2743.2006.00041.x

Konstantinidis, K.T., Ramette, A. & Tiedje, J.M. 2006. The bacterial species definition in the genomic era. Philos. Trans. R. Soc. 361: 1929-1940.

Kotsyurbenko, O.R., Chin, K.J., Glagolev, M.V., Stubner, S., Simankova, M.V., Nozhevnikova, A.N. & Conrad, R. 2004. Acetoclastic and hydrogenotrophic methane production and methanogenic populations in acidic West-Siberian peat bog. Environ. Microbiol. 6: 1159-1173.

Kouchebagh, S.B., Mirshekari, B. & Farahvash, F. 2012. Improvement of corn yield by seed biofertilization and urea application. World Appl. Sci. J. 16: 1239-1242.

Kowalchuk, G.A., Bodelier, P.L.E., Heilig, G.H.J., Stephen, J.R. & Laan-Broek, H.J. 1998. Community analysis of ammonia-oxidising bacteria, in relation to oxygen availability in soils and root oxygenated sedi-ments, using PCR, DGGE and oligonucleotide probe hybridisation, FEMS. Microbiol. Ecol. 27: 339-350.

Kozdroj, J. & Van Elsas, J.D. 2001. Structural diversity of microorganisms in chemically perturbed soil assessed by molecular and cytochemical approaches, J. Microbiol. Method. 43: 197-212.

Krsek, M. & Wellington, E.M. 1999. Comparison of different methods for the isolation and purification of total community DNA from soil. J. Microbiol. Methods. 39: 1-16.

Kudo, T.D., Tomura, D.L., Liu, X.Q.D & Shoun, H. 1996. Two isozyme of P-450 nor of Cylindrocarpon tonkinense: Molecular cloning of the cDNAs and genes, expressions in the yeast and the putative NAD(P)H-binding site. Biochemie. 78: 792-799.

Kumar, K. & Goh, K.M. 2000. Crop residues and management practices:effects on soil quality, soil nitrogen dynamics, crop yield, and nitrogen recovery. Adv. Agron. 68: 197-319.

Kumar, S., Bauddh, K., Barman, S.C. & Singh, R.P. 2014. Amendments of microbial biofertilizers and organic substances reduces requirement of urea and DAP with enhanced nutrient availability and productivity of wheat (Triticum aestivum L.). Ecol. Engineering. 71: 432-437.

PENGARUH PEMBERIAN PUPUK HAYATI PENAMBAT NITROGEN PADA EMISI GAS N2O DIPERTANIAN LAHAN KERINGENDAH RETNANINGRUMUniversitas Gadjah Mada, 2014 | Diunduh dari http://etd.repository.ugm.ac.id/

Page 16: PERTANIAN LAHAN KERING ENDAH RETNANINGRUM 196etd.repository.ugm.ac.id/downloadfile/77543/potongan/S3-2014-306466... · 196 DAFTAR PUSTAKA Adisarwanto, T. & Widyastuti, Y.E. 2004.

211

Kumar, V., Behl, R.K. & Narula, N. 2001. Establishment of phosphate-solubilizing strains of Azotobacter chroococcum in the rhizosphere and their effect on wheat cultivars under green house conditions. Microbiol. Res. 156: 87-93.

Kurakov A.V, Lavrent’ev R.B, Nechitailo, T.Y, Golyshin P.N. & Zvyagintsev, D.G. 2008. Diversity of facultatively anaerobic microscopic mycelial fungi in soils. Microbiol: 77: 90-98.

Kurata, S., Kanagawa, T., Yamada, K., Torimura, M., Yokomaku, T. Kamagata, Y. and Kurane, R. 2001. Fluorescent quenching-based quantitative detection of specific DNA/RNA using a BODIPY®FL-labeled probe or primer. Nucleic Acids Res. 29:34-41.

Kuske, C.R., Barns, S.M. & Busch, J.D.1997. Diverse uncultivated bacterial groups from soils of the arid southwestern United States that are present in many geographic regions. Appl. Environ. Microbiol. 63: 3614-3621.

Kuske, C., Banton K.L., Adorada, D.L., Stark, P.C., Hill, K.K. & Jackson, P.J. 1998. Small-scale DNA sample preparation method for field PCR detection of microbial cells and spores in soil. Appl. Environ. Microbiol. 64: 2463-2472.

Ladd, J.N. & Jackson, R.B. 1982. Biochemistry of ammonification. In: Nitrogen in Agricultural soil (F.G.S. Stevenson, ed). American Society of Agronomy. Madosion, Wisconsin. pp. 173-228.

Lakay, F.M. & Botha, B.A. 2007. Prior, Comparative analysis of environmental DNA extraction and purification methods from different humic acid-rich soils. J. Appl. Microbiol. 102 :265-273.

Lakshminarayana, K., Narula, N., Hooda, I.S. & Faroda, A.S. 1992. Nitrogen economy in wheat (Triticum aestivum L.) through use of Azotobacter chroococcum. Indian J. Agric. Sci. 62: 75-76.

Lam, L., Iino, R., Tabata, K.V. & Noji, H. 2008. Highly-sensitive restriction enzyme assay and analysis: a review. Analytical. Bioanalytical. Chem. 391: 2423-2432.

Lassey, D. & M. Harvey. 2007. Nitrous oxide: the serious side of laughing gas. Water Atmosph. 15: 10-11.

Laughlin, R.J., Rütting, T., Müller, C., Watson, C.J. & Stevens, R.J. 2009. Effect of acetate on soil respiration, N2O emissions and gross N transformations related to fungi and bacteria in a grassland soil. Appl. Soil Ecol. 42: 25-30.

Ledgar, S.F. Penno, J.W. Sprosen, M.S. 1999. Nitrogen inputs and losses from clover/grass pastures grazed by dairy cows, as affected by nitrogen fertilizer application. J. Agric. Scie Cambridge. 132: 215-225.

Lee, J.J., Park, R.D., Kim, Y.W., Shim, J.H., Chae, D.H., Rim, Y.S & Kyoon, B. 2004. Effect of food waste compost on microbial population, soil enzyme activity and lettuce growth. Biores. Technol. 93: 21-28.

Lemke, R.L., Izaurralde, R.C., Nyborg, M. & Solberg, E.D. 1999. Tillage and N source influence soil emitted nitrous oxide in the Alberta Parkland region. Can. J. Soil Sci. 79: 15-24.

Lemke, R.L., Zhong, Z., Campbell, C.A. & Zentner, R. 2007. Can pulse crops

PENGARUH PEMBERIAN PUPUK HAYATI PENAMBAT NITROGEN PADA EMISI GAS N2O DIPERTANIAN LAHAN KERINGENDAH RETNANINGRUMUniversitas Gadjah Mada, 2014 | Diunduh dari http://etd.repository.ugm.ac.id/

Page 17: PERTANIAN LAHAN KERING ENDAH RETNANINGRUM 196etd.repository.ugm.ac.id/downloadfile/77543/potongan/S3-2014-306466... · 196 DAFTAR PUSTAKA Adisarwanto, T. & Widyastuti, Y.E. 2004.

212

play a role in mitigating greenhouse gases from North American agriculture? Agron. J. 99: 1719–1725.

Lensi, R., Domenach, A.M. & Abadi, L. 1992. Field study of nitrification an denitrification in wet savana West Africa (Lamto, Cote d'Ivoie). J. Plant. Soil. 147: 107-113.

Letey, J., Valoras, N., Focht, D. D. & Ryden, J. C. 1981. Nitrous oxide production and reduction during denitrification as affected by redox potential. Soil Sci. Soc. Am. J. 45:727-7 30.

Leybo, A.I., Netrusov, A.I. & Conrad, R. 2006. Effect of hydrogen concentration on the community structure of hydrogenotrophic methanogens studied by T-RFLP analysis of 16S rRNA gene amplicons. Microbiol. 75: 683-688.

Lin, Y.-T. & Shieh, W. Y. 2006. Zobellella denitrificans gen. nov., sp. nov., and Zobellella taiwanensis sp. nov., denitrifying bacteria capable of fermentative metabolism. Int. J. Syst. Evol. Microbiol. 56: 1209-1215.

Lindstrom, K., Murwira,M., Willems, A. & Altier, N. 2010. The biodiversity of beneficial microbe-host mutualism: the case of rhizobia. Res. Microbiol. 161: 453-463.

Liu, C., Wang, K., Meng, S., Zheng, X., Zhou, Z., Han, S., Chen, D. & Yang, Z. 2011. Effects of irrigation, fertilization and crop straw management on nitrous oxide and nitric oxide emissions from a wheat-maize rotation field in northern China. Agric. Ecosys. Environ. 140: 226-233.

Liu, W.T., Marsh, T.L., Cheng, H. & Forney, L.J. 1997. Characterization of microbial diversity by determining terminal restriction fragment length polymorphisms of genes encoding 16S rRNA. Appl. Environ. Microbiol. 63: 4516-4522.

Liu, X., Tiquia, S.M., Holguin, G., Wu, L., Nold, S., Devol, C., Luo, A.H., Palumbo, K.A.V., Tiedje, J.M. & Zhou, J. 2003. Molecular diversity of denitrifying genes in continental margin sediments within the oxygen deficient zone of the Pacific Coast of Mexico. Appl. Environ. Microbiol. 69: 3549-3560.

Lord, N.S., Kaplan, C.W., Shank, P., Kitts, C.L. & Elrod, S.L. 2002. Assessment of fungal diversity using terminal restriction fragment (TRF) pattern analysis: comparison of 18S and ITS ribosomal regions. FEMS. Microbiol. Ecol. 42:327-337.

Lu, Y., Lueders, T., Friedrich, M.W. & Conrad, R. 2005. Detecting active methanogenic populations on rice roots using stable isotope probing. Environ. Microbiol. 7: 326-336.

Lueders, T., Chin, K.J., Conrad, R. & Friedrich, M., 2001. Molecular analyses of methyl-coenzyme M reductase alpha-subunit (mcrA) genes in rice field soil and enrichment cultures reveal the methanogenic phenotype of a novel archaeal lineage. Environ. Microbiol. 3: 194-204.

Lueders, T. & Friedrich, M.W. 2003. Evaluation of PCR amplification bias by terminal restriction fragment length polymorphism analysis of small-subunit rRNA and mcrAgenes by using defined template mixtures of methanogenic pure cultures and soil DNA extracts. Appl. Environ.

PENGARUH PEMBERIAN PUPUK HAYATI PENAMBAT NITROGEN PADA EMISI GAS N2O DIPERTANIAN LAHAN KERINGENDAH RETNANINGRUMUniversitas Gadjah Mada, 2014 | Diunduh dari http://etd.repository.ugm.ac.id/

Page 18: PERTANIAN LAHAN KERING ENDAH RETNANINGRUM 196etd.repository.ugm.ac.id/downloadfile/77543/potongan/S3-2014-306466... · 196 DAFTAR PUSTAKA Adisarwanto, T. & Widyastuti, Y.E. 2004.

213

Microbiol. 69:320-326. Luo, J. & Ledgard, S.F. 2008. A test of a winter farm management option for

mitigating nitrous oxide emissions from a dairy farm. Soil. Use. Management. 24: 121-13.

Lupwayi, N. Z., Lea, T., Beaudoin, J. L. & Clayton, G. W. 2005. Soil microbial biomass, functional diversity and crop yields following application of cattle manure, hog manure and inorganic fertilizers. Can. J. Soil. Sci. 85: 193-201.

Lupwayi, N.Z. & Kennedy, A.C. 2007. Grain legumes in Northern Great Plains: impacts on selected biological soil processes. Agron. J. 99: 1700-1709.

Lynch, J.M. 1990. The Rhizosphere. John Wiley, Chichester. Ma, B.L., Dwyer, L.M. & Gregorich, E.G. 1999. Soil nitrogen amendment effects

on nitrogen uptake and grain yield of maize. Agron. J. 91: 650-656. Mahimairaja, S., Bolan, N.S. & Hedley, M.J. 1995. Denitrification losses of N

from fresh and composted manures. Soil. Biol.Biochem. 27: 1223-1225. Makino, S.I., Cheun, H.I., Watarai, M., Uchida, I. & Takeshi, K. 2001. Detection

of anthrax spores from the air by real-time PCR. Lett. Appl. Microbiol. 33: 237-240.

Maniatis T., Fritsch, E.F & Sambrook, J .1982. Molecular Cloning A Laboratory Manual, Cold Spring Harbor Laboratory, Cold Springs Harbor, New York.

Marschner, H .1995. Mineral Nutrition of Higher Plants. 2 nd edition. Academic Press, London.

Marsh. T.L. 1999. Terminal restriction fragment length polymorphism (T-RFLP): an emerging method for characterizing diversity among homologous populations of amplification products. Curr. Opinion Microbiol. 2: 323-327.

Mathieu, O., Leveque, J., Henault, C., Milloux, M.J., Bizouard, F., & Andreux, F. 2006. Emissions and spatial variability of N2O, N2 and nitrous oxide mole fraction at the field scale, revealed with 15N isotopic techniques. Soil. Biol. Biochem. 38: 941-951.

McCarty, G., Bremner, J. & Schmidt, E. 1991. Effects of phenolic acids on ammonia oxidation by terrestrial autotrophic nitrifying microorganisms. FEMS. Microbiol. Ecol. 85: 345-349.

McCarty, G. W. & Bremner, J. M. 1993. Factors affecting the availability of organic carbon for denitrification of nitrate in subsoils. Biol. Fertil. Soils. 15: 132-136.

McKenney, D.J., Wang, S.W., Drury. C.F. & Findlay, W.I. Denitrification and mineralization in soil ammwnsed with legume, grass and corn residues. Soi Sci. Soc. Am. J. 57:1013-1020

McKillip, J.L. & Drake, M. 2004. Real-time nucleic acid-based detection methods for pathogenic bacteria in food. J. Food Protection. 67: 823-832.

Mengel, K. & Kirkby, E.A. 1987. Principles of Plant Nutrition. 4th edition. International Potash Institute, Bern.

Merino, P., Estavillo, J., Graciolli, L., Pinto, M., Lacuesta, M., Munoz-Rueda, A. & Gonzalez-Murua, C. 2002. Mitigation of N2O emissions from

PENGARUH PEMBERIAN PUPUK HAYATI PENAMBAT NITROGEN PADA EMISI GAS N2O DIPERTANIAN LAHAN KERINGENDAH RETNANINGRUMUniversitas Gadjah Mada, 2014 | Diunduh dari http://etd.repository.ugm.ac.id/

Page 19: PERTANIAN LAHAN KERING ENDAH RETNANINGRUM 196etd.repository.ugm.ac.id/downloadfile/77543/potongan/S3-2014-306466... · 196 DAFTAR PUSTAKA Adisarwanto, T. & Widyastuti, Y.E. 2004.

214

grassland by nitrification inhibitor and actilith F2 applied with fertilizer and cattle slurry. Soil Use Manage. 18: 135-141.

Meshram, S.U. & Shende, S.T. 1982. Response maize to Azotobacter chroococcum. Plant. Soil. 69: 265-273.

Miao, G.Y., Zhang, Y. T., Yin, J., Hou, Y. S. & Pan, X. L. 1998. A study on the development of root system in winter wheat under unirrigated conditions in semi-arid Loess Plateau. Acta Agron. Sin. 15: 104-115.

Mikanova, O., Novakova, J., Hanzlikova, A., Kubat, J. & Filip, Z. 1996. Effect of longterm fertilization and anthropogonic load on biomass and the incidence of some groups of microorganisms. Plant Prod. 42: 391-397.

Millar, N., Ndufa, J.K., Cadisch, G. & Baggs, E.M. 2004. Nitrous oxide emissions following incorporation of improved-fallow residues in the humid tropics. Glob. Biogeochem. Cycl. 18: 1032-1039.

Miller, D. J. & Nicholas, D.J.D. 1985. Characterization of a soluble cytochrome oxidase/nitrite reductase from Nitrosomonas europaea. J. Gen. Microbiol. 131: 2851-2854.

Miller, M.N., Zebarth, B.J., Dandie, C.E., Burton, D.L.,Goyer, C. & Trevors, J.T. 2008. Crop residue influence on the denitrification, N2O emissions and denitrifier community abundance. Soil Biol. Biochem. 40: 2553-2562.

Milosevic, N., Tintor, B., Protic, R., Cvijanovic, G. & Dimitrijevic, T. 2012. Effect of inoculation with Azotobacter chroococcum on wheat yield and seed quality. Romanian Biotech. Lett. 17: 7352-7357.

Mitchell, K.R. & Takacs-Vesbach, C.D. 2008. A comparison of methods for total community DNA preservation and extraction from various thermalenvironments. J. Industrial Microbiol. Biotechnol. 35: 1139-1147.

Moedjiono & Mejaya, M.J. 1994. Variabilitas genetik beberapa karakter plasma nutfah jagung koleksi Balittan, Malang. Zuriat. 5: 27-32.

Moeseneder, M.M., Arrieta, J.M., Muyzer, G., Winter, C. & Herndl, G. 1999. Optimization of terminal-restriction fragment length polymorphism analysis for complex marine bacterioplankton communities and comparison with denaturing gradient gel electrophoresis. Appl. Environ. Microbiol. 65: 3518-3525.

Moeseneder, M.M., Winter, C., Arrieta, J.M. & Herndl, G.J. 2001 Terminal-restriction fragment length polymorphism (T-RFLP) screening of a marine archaeal clone library to determine the different phylotypes. J Microbiol. Methods. 44:159-172.

Moran, M.A., Torsvik, V.L., Torsvik, T. & Hodson, R.E. 1993. Direct extraction and purification of rRNA for ecological studies. Appl. Environ. Microbiol. 59: 915-918.

Morley, N. & Baggs, E.M. 2010. Carbon and oxygen controls on N2O and N2 production during nitrate reduction. Soil. Biol. Biochem. 42: 1864-1871.

Morozkina E.V., Kurakov, A.V., Nosikov, A.N., Sapova, E.V. & L’vov, N.P. 2005. Properties of nitrate reductase from Fusarium oxysporum 11dn1 fungi grown under anaerobic conditions. Appl. Biochem. Microbiol. 41: 254-258.

PENGARUH PEMBERIAN PUPUK HAYATI PENAMBAT NITROGEN PADA EMISI GAS N2O DIPERTANIAN LAHAN KERINGENDAH RETNANINGRUMUniversitas Gadjah Mada, 2014 | Diunduh dari http://etd.repository.ugm.ac.id/

Page 20: PERTANIAN LAHAN KERING ENDAH RETNANINGRUM 196etd.repository.ugm.ac.id/downloadfile/77543/potongan/S3-2014-306466... · 196 DAFTAR PUSTAKA Adisarwanto, T. & Widyastuti, Y.E. 2004.

215

Mosier, A., Kroeze, C., Nevison, C., Oenema, O., Seitsinger, S. & Van-Cleemput, O. 1998. Closing the global N2O budget: nitrous oxide emissions through the agricultural nitrogen cycle. Nutr. Cycl. Agroeco. 52: 225-248.

Mosier, A.R., Syers, J.K. & Freney, J.R., 2004. Agriculture and the Nitrogen Cycle. Island Press, Washington, USA. pp. 296

Mounier, E. Hallet, S., Chèneby, D., Benizri, E., Gruet, Y., Nguyen, C., Piutti, S., Robin, C., Slezack-Deschaumes, S., Martin-Laurent, F., Germon, J.C. & Philippot, L. 2004. Influence of maize mucilage on the diversity and activity of the denitrifying community. Environ. Microbiol. 6: 301-312. http://dx.doi:10.1111/j.1462-2920.2004.00571.x

Mulder, J.J. & Van de Graaf, E. 1995. Anaerobic ammonium oxidation in a denitrifying fluidized bed reactor. FEMS. Microbiol. Ecol. 3: 177-184.

Munch, J.C. 1989. Organism Spesific Denitrification in Samples of Udifluvent with different nitrate concentrations. J. Plant Nutr. Soil. Sci. 152: 395-400.

Munch, J.C. & Velthof, G.L. 2007. Denitrification and Agriculture in Biology of Nitrogen Cycle. In: Biology of the Nitrogen Cycle (H. Bothe, S.J. Ferguson & W.E. Newton, eds). First Edition. Elsevier, Amsterdam. pp. 331-341

Muyzer, G.A., de Waal, E.C. & Uitterlinden, A.G. 1993. Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl. Environ. Microbiol. 59: 695-700.

Myers, R.M., Fisher, S.G., Lerman, L.S. & Maniatis, T., 1985. Nearly all single base substitutions in DNA fragments joined to a GC-clamp can be detected by denaturing gradient gel electrophoresis. Nucleic Acids Res. 13: 3131-3145.

Nakahara, K. & Shoun, H. 1986. N-Terminal Processing and Amino Acid Sequence of Two Isoforms of Nitric Oxide Reductase Cytochrome P450nor from Fusarium oxysporum. J .Biochem. 120: 1082-1087.

Nakahara, K. Tanimoto, T. Hatano, K, Usuda, K. & Shoun, H. 1993. Cytochrome P-450 55a1 (P-450dNIR) acts as nitric oxide reductase employing NADH as the direct electron donor. J. Biol. Chem. 263: 8350-8355.

Nalin, R., Normand, P., Simonet, P. & Domenach, A.M. 1999. Polymerase chain reaction and hybridization on DNA extracted from soil as a tool for Frankia spp. population distribution studies in soil. Can. J. Bot. 77 : 1239-1247.

Nathans, D. & Smith, H.O. 1975 Restriction endonucleases in the analysis and restructuring of DNA molecules. Annual Rev. Biochem. 44: 273-293.

Nazar, A. 2006. Karakter agronomi 16 genotipe jagung hibrida berumur dalam. J. Akta Agro. 9: 67-74

Neal, J.L., Allen, G.C., Morse, R.D. & Wolf, D.D. 1983. Nitrate, nitrite, nitrous oxide and oxygen-dependent hydrogen uptake by Rhizobium. FEMS. Microbiol. Lett. 17: 335-338.

Niewiadomska, A., Klama, J., Wolna-Maruwka, A. & Sulewsk, H. 2010. Effect

PENGARUH PEMBERIAN PUPUK HAYATI PENAMBAT NITROGEN PADA EMISI GAS N2O DIPERTANIAN LAHAN KERINGENDAH RETNANINGRUMUniversitas Gadjah Mada, 2014 | Diunduh dari http://etd.repository.ugm.ac.id/

Page 21: PERTANIAN LAHAN KERING ENDAH RETNANINGRUM 196etd.repository.ugm.ac.id/downloadfile/77543/potongan/S3-2014-306466... · 196 DAFTAR PUSTAKA Adisarwanto, T. & Widyastuti, Y.E. 2004.

216

of manure application on the development dynamics of proteolytic and ammonification bacteria under maize (Zea mays L.) cropping. Acta Sci. Pol. Agricultura. 9: 11-20.

Nishita, G. & Joshi, N.C. 2010. Growth and yield response of chickpea (Cicer arietinum) to seed inoculation with Rhizobium sp. Nat. Sci. 8: 232-236.

Nishizawa, T., Komatsuzaki, M., Kaneko, N. & Ohta, H. 2008. Archaeal diversity of upland rice field soil assessed by the terminal restriction fragment length polymorphism method combined with real time quantitative-PCR and clone library analysis. Microbes. Environ. 23: 237-243.

Noll, M., Matthies, D., Frenzel, P., Derakshani, M. & Liesack, W. 2005 Succession of bacterial community structure and diversity in a paddy soil oxygen gradient. Environ. Microbiol. 7: 382-395.

Nussslein, K. & Tiedje, J.M. 1998. Characterization of a young Hawaiian soil bacterial community for its dominant and rare members using small subunit rDNA amplified from DNA fractionated by its guanine and cytosine composition. Appl. Environ. Microbiol. 64: 1283-1289.

Nutman, P. S. 1956. The influence of the legume in root-nodule symbiosis. Biol. Rev. 31:109-149.

Ochman, H. & Wilson, A. C. 1987. Evolution in bacteria evidence for a universal substitution rate in cellular genomes. J. Mol. Evol. 26: 74-86.

Odu, C.T.I. & Adeoye, O.T.G. 1970. Heterotrophic nitrification in soils-a perliminary investigation. Soil Biol. Biochem. 2: 41-45.

O’Hara, G.W. 2001. Nutritional constraints on root nodule bacteria affecting symbiotic nitrogen fixation: a review. Aust. J. Exp. Agric. 41: 417-433.

Oksanen, J., Blanchet,G.,Kindt, R., Legendre, P., O’Hara, R. B. & Simpson, G. 2011. Vegan: Community Ecology Package. R package version 1.17-6. Available at: http://CRAN.R-project.org/package=vegan

Orita, M., Iwahana, H., Kanazawa, H., Hayashi, K. & Sekiya, T. 1989. Detection of polymorphisms of human DNA by gel electrophoresis as single strand conformation polymorphisms. Proc. Natl. Acad. Sci. 86: 2766-2770.

Ortega, C.A. 1987. Inspect of Maize. A Guide for Field Identification. CIMMTY. Mexico. pp. 106.

Osborn, A.M., Moore, E.R.B. & Timmis, N.T. 2000. An evaluation of terminal-restriction fragment length polymorphism (T-RFLP) analysis for the study of microbial community structure and dynamics. Env. Microbiol. 2: 39-50.

Osborne, C.S., Peoples, M.B. & Janssen, P.H. 2010. Exposure of soil to a low concentration of hydrogen elicits a reproducible, single member shift in the bacterial community. Appl. Environ. Microbiol. 76:1471–1479.

Pan, B., Vessey, J.K. & Smith, D.L. 2002. Response of field-grown soybean to co-inoculation with the plant growth promoting rhizobacteria Serratia proteamaculans or Serratia liquefaciens, and Bradyrhizobium japonicum pre incubated with genistein. Eur. J. Agronomy. 17: 143-153.

Pandey, A. & Kumar, S. 1989. Potential of Azotobacter and Azospirilla as

PENGARUH PEMBERIAN PUPUK HAYATI PENAMBAT NITROGEN PADA EMISI GAS N2O DIPERTANIAN LAHAN KERINGENDAH RETNANINGRUMUniversitas Gadjah Mada, 2014 | Diunduh dari http://etd.repository.ugm.ac.id/

Page 22: PERTANIAN LAHAN KERING ENDAH RETNANINGRUM 196etd.repository.ugm.ac.id/downloadfile/77543/potongan/S3-2014-306466... · 196 DAFTAR PUSTAKA Adisarwanto, T. & Widyastuti, Y.E. 2004.

217

biofertilizers for upland agriculture. Rev. J. Sci. Indust. Research. 48: 134-144.

Pandey, K.R., Shah, S.C. & Becker, M. 2008. Management of native soil nitrogen for reducing nitrous oxide emissions and higher rice production. J. Agr. Environ. 9: 1-9.

Parham, J. A., Deng, S. P., Raun, W. R. & Johnson, G. V. 2000. Long-term cattle manure application in soil: Effect on soil phosphorus levels, microbial biomass C, and dehydrogenase and phosphatase activities. Biol. Fertil. Soils. 35: 328-337.

Park, S., Perez, T., Boering, K.A., Trumbore, S.E., Gil, J., Marquina, S. & Tyler, S.C. 2011. Can N2O stable isotopes and isotopomers be useful tools to characterize sources and microbial pathways of N2O production and consumption in tropical soils? Global Biogeochem. Cycl. 25: 1001-1012.

Park, S.Y., Shimizu, H., Adachi, S., Nakagawa, A., Tanaka, I., Nakahara, K., Shoun, H., Obayashi, E., Nakamura, H., Iizuka, T. & Shiro, Y. 1997. Chrystal structure of nitric oxide reductase from denitrifying fungus Fusarium oxysporium. Nat. Struct. Biol. 10: 827-832.

Parkin, T.B. 1987. Soil microsites as a sources of denitrification variability. Soil Sci. Society. Am. J. 51: 1194-1199.

Parkin, T.B. & Kaspar, T.C. 2006. Nitrous oxide emissions from corn–soybean systems in the Midwest. J. Environ. Qual. 35: 1496-1506.

Pasandaran. P.,dan Tangejaya.B., 2004. Prospek Produksi Jagung di Indonesia. Badan Litbang Pertanian. Jakarta.

Passianoto, C.C., Arhens, T., Feigl, B.J., Steudler, P.A., Carmo, J.B. & Melillo, J.M. 2003. Emissions of CO2, N2O, and NO in conventional and no-till management practices in Rondonia. Brazil. Biol. Fertil. Soils. 38: 200-208.

Patra, R.K., Pant, L.M. & Pradhan, K. 2012. Response of soybean to inoculation with rhizobial strains: effect on growth, yield, N uptake and soil N status. World. J. Agric. Sci. 8: 51-54.

Patureau, D., Godon, J. J. & Dabert, P. 1998. Microvirgula aerodenitrificans gen. nov., sp. nov., a new Gram-negative bacterium exhibitng co-respiration of oxygen and nitrogen oxides up to oxygen-saturated conditions. Int. J. Syst. Bacteriol. 48: 775-782.

Paul, J.W. & Beauchamp, E.G. 1989. Denitrification and fermentation in plant residue amended soil. Biol. Fertil. Soils. 7: 303-309.

Paul, J.W., Beauchamp, E.G. & Zhang, X. 1993. Nitrous and nitric oxide emissions during nitrification and denitrification from manure amended soil in the laboratory. Can. J. Soil. Sci. 73: 539-553.

Pavia, D.L., Lampman, G.M., Kritz, G.S. & Engel, R.G. 2006. Introduction to Organic Laboratory Techniques: A Microscale Approach. 4th edition. Cole Publishing Co., St. Paul. pp. 797-817.

Peoples, M.B. & Herridge, D.F. 1990. Nitrogen fixation by legumes intropical and subtropical agriculture. Adv. Agron. 44: 155-223.

Perez-Piqueres, A., Edel-Hermann, V., Alabouvette, C. & Steinberg, C. 2006.

PENGARUH PEMBERIAN PUPUK HAYATI PENAMBAT NITROGEN PADA EMISI GAS N2O DIPERTANIAN LAHAN KERINGENDAH RETNANINGRUMUniversitas Gadjah Mada, 2014 | Diunduh dari http://etd.repository.ugm.ac.id/

Page 23: PERTANIAN LAHAN KERING ENDAH RETNANINGRUM 196etd.repository.ugm.ac.id/downloadfile/77543/potongan/S3-2014-306466... · 196 DAFTAR PUSTAKA Adisarwanto, T. & Widyastuti, Y.E. 2004.

218

Response of soil microbial communities to compost amendments. Soil Biol. Biochem. 38: 460-470.

Perrine, F.M., Rolfe ,B.G., Hyne, M.F. & Hocart, C.H. 2004. Gas chromatography-mass spectrometry analysis of indoleacetic acid and tryptophan following aqueous chloroformate derivatisation of Rhizobium exudates. Plant. Physiol. Biochem. 42: 723-729. http://dx.doi:10.1016/j.plaphy.2004.07.008

Philippot, L., Piutti, S., Martin-Laurent, F., Hallet, S. & Germon, J. 2002. Molecular analysis of the nitrate-reducing community from unplanted and maize-planted soils. Appl. Environ. Microbiol. 68: 6121-6128.

Philippot, L. & Hallin., S. 2005. Finding the missing link between diversity and activity using denitrifying bacteria as a model functional community. Curr. Opin. Microbiol. 8: 234-239.

Philippot, L., Hallin, S. & Schloter, M. 2007. Ecology of denitrifying prokaryotes in agricultural soil. Adv. Agron. 96: 135-190.

Philippot, L., Hallin, S., Borjesson, G. & Baggs, E.M. 2009. Biochemical cycling in the rhizosphere having an impact on global change. Plant Soil. 321: 61-81.

Pidwirny, M. 2006. The Greenhouse Effect. Fundamentals of Physical Geography. 2nd ed. Okanagan, University of British Columbia.

Porteous, L.A. & Armstrong, J.L. 1991. Recovery of bulk DNA from soil by a rapid, small-scale extraction method. Curr. Microbiol. 22: 345-348.

Porteous L.A., Seidler R.J. & Watrud L.S. 1997. An improved method for purifying DNA from soil for polymerase chain reaction amplification and molecular ecology applications. Mol .Ecol. 6 : 787-791.

Poth, M & Focht, D.D. 1985. I5N kinetic analysis of N,O production by Nitrosomonas europaea: An examination of nitrifier denitrification. Appl. Environ. Microbiol. 49: 1140-1141.

Prasad, R. 1998. Fertilizer urea, food security, health and the environment. Curr. Sci. 75: 677-683.

Radwan, S.M.A. & Awad, N.M. 2002. Effect of soil amendment with various organic wastes with multi-biofertilizer on yield of peanut plants in sandy soil. J. Agr. Sci.Mansoura University. 27: 3129-3138.

Raleigh, E. A. & Brooks, J.E. 1998. Restriction modification systems: where they are and what they do. In:. Bacterial Genomes (F.J. Bruijn, J.R. Lupski, & G.M. Weinstock, eds). Chapman and Hall, New York. pp. 78-92.

Rahni, N.M. 2012. Karakteristik pertumbuhan dan hasil tanaman jagung (Zea mays L.) pada ultisols yang diberi pupuk hayati dan pupuk hijau. Agriplus. 22: 162-169.

Ranjard, L.F., Poly, J. Combrisson, Richaume, A. & Nazaret, S. 1998. A single procedure to recover DNA from the surface or insideaggregates and in various size fractions of soil suitable for PCR-based assays of bacterial communities, Eur. J. Soil Biol. 34 : 89-97.

Ranjard, L., Poly, F. & Nazaret, S. 2000. Monitoring complex bacterial communities using culture independent molecular techniques: application to soil environment. Res. Microbiol. 151: 167-177.

PENGARUH PEMBERIAN PUPUK HAYATI PENAMBAT NITROGEN PADA EMISI GAS N2O DIPERTANIAN LAHAN KERINGENDAH RETNANINGRUMUniversitas Gadjah Mada, 2014 | Diunduh dari http://etd.repository.ugm.ac.id/

Page 24: PERTANIAN LAHAN KERING ENDAH RETNANINGRUM 196etd.repository.ugm.ac.id/downloadfile/77543/potongan/S3-2014-306466... · 196 DAFTAR PUSTAKA Adisarwanto, T. & Widyastuti, Y.E. 2004.

219

Ramakrishnan, B., Lueders, T., Conrad, R. & Friedrich, M. 2000. Effect of soil aggregate size on methanogenesis and archaeal community structure in anoxic rice field soil. FEMS. Microbiol. Ecol. 32: 261- 270.

Ramos, C. 1996. Effect of agricultural practices on the nitrogen losses to the environment. Fertil. Res. 43: 183-189.

Rapson , T.D. & Dacres, H. 2014. Review Analytical techniques for measuring nitrous oxide.Trends. Anal. Chem. 54: 65-74. http://dx.doi.org/10.1016/j.trac.2013.11.004

Rasche, F., Ho¨dl, V., Poll, C., Kandeler, E., Gerzabek, M.H., Elsas, J.D. & Sessitsch, A. 2006. Rhizosphere bacteria affected by transgenic potatoes with antibacterial activities compared with the effects of soil, wild-type potatoes, vegetation! stage and pathogen exposure. FEMS. Microbiol. Ecol. 56: 219-235.

Rao, E.V.S.P. & Puttanna, K. 2000. Nitrates, Agriculture. Curr. Science. 79: 1163-1167.

Raun, W.R. & Johnson, G.V. 1999. Improving nitrogen use efficiency for cereal production. Agron. J. 91: 357-363.

Rawluk, C.D.L., Grant, C.A. & Racz, G.J., 2001. Ammonia volatilization from soils fertilized with urea and varying rates of urease inhibitor NBPT. Can. J. Soil Sci. 81: 239-246.

Retnaningrum, E., Prijambada, I., Daryono, B.S., Moejopawiro, S. 2011. Peningkatan peran masyarakat dalam mereduksi gas kaca dengan penggunaan pupuk hayati. Laporan Penelitian IMHERE. Fakultas Biologi.

Rıdvan, K. 2008. Yield response and nitrogen concentrations of spring wheat (Triticum aestivum) inoculated with Azotobacter chroococcum strains. Ecol. Eng. 33 :150-156.

Ritchie, G. A. & Nicholas, D.J. 1974. The partial characterization of purified nitrite reductase and hydroxylamine oxidase from Nitrosomonas europaea. Biochem. J. 138: 471-480.

Robe, P., Nalin, R., Capellano, C., Vogel, T.M. & Simonet, P. 2003. Extraction of DNA from soil. Europ. J .Soil Biol. 39: 183-190.

Roberts, R.J. 1980. Restriction and modification enzymes and their recognition sequences. Nucleic Acids Research 1: 63-80.

Robertson, G.P., Paul, E.A. & Harwood, R.R., 2000. Greenhouse gases in intensive agriculture: contributions of individual gases to the radiative forcing of the atmosphere. Science. 289: 1922-1925.

Robertson, L.A. & Kuenen, J.G. 1990. Combined Heterotrohic nitrification and aerobic denitrification in Thiosphaera pantotropha and other bacteria. Antonie Van Leeuwenhoek 57: 139-152.

Robertson, G.P. & Tiedje, J.M. 1987. Nitrous oxide sources in aerobic soils: nitrifica-tion, denitrification and other biological processes. Soil Biol. Biochem. 19:187-193.

Rochette, P., Angers, D.A., Belanger, G., Chantigny, M.H., Prevost, D. & Levesque, G. 2004. Emissions of N2O from alfalfa and soybean crops in eastern Canada. Soil Sci. Soc. Am. J. 68: 93-506.

PENGARUH PEMBERIAN PUPUK HAYATI PENAMBAT NITROGEN PADA EMISI GAS N2O DIPERTANIAN LAHAN KERINGENDAH RETNANINGRUMUniversitas Gadjah Mada, 2014 | Diunduh dari http://etd.repository.ugm.ac.id/

Page 25: PERTANIAN LAHAN KERING ENDAH RETNANINGRUM 196etd.repository.ugm.ac.id/downloadfile/77543/potongan/S3-2014-306466... · 196 DAFTAR PUSTAKA Adisarwanto, T. & Widyastuti, Y.E. 2004.

220

Rochette, P., Worth, D.E., Lemke, R.L., McConkey, B.G., Pennock, D.J., Wagner-Riddle, C. & Desjardins, R.L.! 2008. Estimation of N2O emissions from agricultural soils in Canada. I. Development of a country-specific methodology. Can. J. Soil Sci. 88: 641-654. http://dx.doi.org/10.4141/CJSS07025

Rodiah. 1990. Deskripsi Varietas Unggul Kacang-kacangan. Balai Penelitian Tanaman Pangan Malang.

Roose-Amsaleg, C.L., Garnier-Sillam, E. & Harry, M. 2001. Extraction and purification of microbial DNA from soil and sediment samples. Appl. Soil Ecol. 18: 47-60.

Roussel-Delif, L., Tarnawski, S., Hamelin, J., Philippot, L., Aragno, M. & Fromin, N. 2005. Frequency and diversity of nitrate reductase genes among nitrate-dissimilating Pseudomonas in the rhizosphere of perennial grasses grown in field conditions. Microbial. Ecol. 49: 63-72.

Ruser, R., Flessa, H., Russow, R., Schmidt, G., Buegger, F. & Munch, J.C. 2006. Emission of N2O, N2 and CO2 from soil fertilized with nitrate: effect of compaction, soil moisture and rewetting. Soil Biol. Biochem. 38: 263-274.

Ruz-Jerez, B.E., Whire, R.E. & Ball-Roger, P. 1994. Longterm measurement of denitrification in three contrasting pastures grazed by sheep. Soil Biol. Biochem. 26: 29-39.

Ruzicka, S., Edgerton, D., Norman, M. & Hill, T. 2000. The utility of ergosterol as a bioindicator of fungi in temperate soils. Soil Biol. Biochem. 32: 989-1005.

Saano, A., Tas, E., Pippola, S., Lindstrom, K. & Van Elsas, J.D. 1995. Extraction and analysis of microbial DNA from soil. In: Nucleic Acids in the Environment: Methods and Applications (J.D. Van Elsas & J.T. Trevors, eds). Springer-Verlag, Heidelberg, Germany. pp. 49-67.

Sabaty, M., Gagnon, J. & Vermeglio, A. 1994. Induction by nitrate of cytoplasmic and periplasmic proteins in the photodenitrifier Rhodobacter sphaeroides forma sp. denitrificans under anaerobic or aerobic condition. Arch. Microbiol. 162: 335-343.

Saikaly, P.E., Stroot, P.G. & Oerther, D.B. 2005. Use of 16S rRNA Gene Terminal Restriction Fragment Analysis To Assess the Impact of Solids Retention Time on the Bacterial Diversity of Activated Sludge. Appl. Environ. Microbiol. 71: 5814-5822.

Sambrook, J., Fristch, E.F. & Maniatis, T. 1989. Molecular Cloning. A laboratory Manual. 2nd edn. Cold Spring Harbor, Cold Spring Harbor Laboratory Press, New York.

Sawamura, H., Yamada, M., Endo, K., Soda, S., Ishigaki, T. & Ike, M. 2010. Characterization of microorganisms at different landfill depths using carbon-utilization patterns and 16S rRNA gene based T-RFLP. J. Bioscience. Bioeng. 109: 130-137.

Scaglia, J., Lensi, R. & Chalamet, A. 1985. Relationship between photosynthesis and denitrification in planted soil. Plant Soil. 84: 37-43.

Schmidt, I., Rob J. M., Van Spanning, J. M. & Jetten, M.S.M. 2004.

PENGARUH PEMBERIAN PUPUK HAYATI PENAMBAT NITROGEN PADA EMISI GAS N2O DIPERTANIAN LAHAN KERINGENDAH RETNANINGRUMUniversitas Gadjah Mada, 2014 | Diunduh dari http://etd.repository.ugm.ac.id/

Page 26: PERTANIAN LAHAN KERING ENDAH RETNANINGRUM 196etd.repository.ugm.ac.id/downloadfile/77543/potongan/S3-2014-306466... · 196 DAFTAR PUSTAKA Adisarwanto, T. & Widyastuti, Y.E. 2004.

221

Denitrification and ammonia oxidation by Nitrosomonas europaea wild-type, and NirKand NorB-deficient mutants. Microbiol. 150: 4107-4114.

Schmidt, M., Prieme, A. & Stougaard, P. 2006. Bacterial diversity in permanently cold and alkaline ikaite columns from Greenland. Extremophiles. 10: 551-562

Schwieger, F. & Tebbe, C.C. 1998. A new approach to utilize PCR-single-strand-conformation polymorphism for 16S rRNA gene-based microbial community analysis. Appl. Environ. Microbiol. 64: 4870-4876.

Sene, G., Thiao, M., Mgaye, R.M., Ndoye, F., Kane, K., Diouf, D. & Sylla, S.N. 2010. Response of three peanut cultivars toward inoculation with two Bradyrhizobium strains and Arbuscular mycorrhizal fungus in Senegal. African J. Microbiol. Research. 4: 2520-2527.

Sessitsch, A., Weilharter, A., Gerzabek, M.H., Kirchmann, H. & Kandeler, E. 2001. Microbial population structures in soil particle size fractions of a long-term fertilizer field experiment. Appl. Environ. Microbiol. 67: 4215-4224.

Sharma, S., Aneja, M. K., Mayer, J., Munch, J. C. & Schloter, M. 2005. Diversity of transcripts of nitrite reductase genes (nirK and nirS) in rhizospheres of grain legumes. Appl. Environ. Microbiol. 71: 2001-2007.

Shoun, H., Sudo, Y., Seto, Y. & Beppu, T. 1983. Purification and properties of a cytochrome P-450 of a fungus, Fusarium oxysporum. J. Biochem. 94: 1219-1229.

Shoun, H. & Tanimoto, T. 1991. denitrification by the fungus Fusarium oxysporium and involvement of cytochrome P-450 in teh respiratory nitrite reduction. J. Biol. Chem. 266: 11079-11082.

Shoun, H., Kim, D., Uchiyama, H. & Sugiyama, H.J. 1992. Denitrifcation by fungi. FEMS. Microbiol. Lett. 94: 277-282.

Shoun, H., Sudo, Y.. Seto, Y. & Beppu, T. 1983. Inhibition of p-hydroxybenzoate hydroxylase by anions: possible existence of two anion-binding sites in the site for reduced nicotinamide adenine dinucleotide phosphate. J. Biochem. 94: 1219-1229.

Sinclair, T.R. & de Wit, C.T.1975. Photosynthate and nitrogen requirements for seed production by various crops. In: Science (M. Tollenaar, D.E. Mccullough & L.M. Dwyer, eds). Washington, D.C., New York. pp. 565-567.

Simon, L., Levesque, R.C. & Lalonde, M. 1993. Identification of endomycorrhizal fungi colonizing roots by fluorescent single-strand conformation polymorphism-PCR. Appl. Environ. Microbiol. 59: 4211-4215.

Skiba, U., Smith, K.A. & Fowler, D., 1993. Nitrification and denitrification as sources of nitric oxide and nitrous oxide in a sandy loamsoil. Soil Biol. Biochem. 25: 1527-1536.

Skiba, U. & Smith, K.A. 2000. The control of nitrous oxide emissions from agricultural and natural soils. Chemosph. Global. Change. Sci. 2: 379-386.

PENGARUH PEMBERIAN PUPUK HAYATI PENAMBAT NITROGEN PADA EMISI GAS N2O DIPERTANIAN LAHAN KERINGENDAH RETNANINGRUMUniversitas Gadjah Mada, 2014 | Diunduh dari http://etd.repository.ugm.ac.id/

Page 27: PERTANIAN LAHAN KERING ENDAH RETNANINGRUM 196etd.repository.ugm.ac.id/downloadfile/77543/potongan/S3-2014-306466... · 196 DAFTAR PUSTAKA Adisarwanto, T. & Widyastuti, Y.E. 2004.

222

Smalla K, Cresswell, N. & Mendoncahagler, L.C. 1993. Rapid DNA extraction protocol from soil for polymerase chain reaction-mediated amplification. J. Appl .Bacteriol. 74 : 78-85.

Smit E., Leeflang P. & Wernars K. 1997. Shifts in microbial community structure and diversity in soil caused by copper contamination using amplified ribosomal DNA restriction analysis. FEMS Microbiol. Ecol. 23: 249-261.

Smith, K.A., Thomson, P.E., Clayton, H., McTaggart, I.P. & Conen, F. 1998. Effects of temperature, water content and nitrogen fertilization on emissions of nitrous oxide by soils. Atmospheric Environ. 32: 3301-3309. http://dx.doi.org/10.1016/S1352-2310(97)00492-5

Sudhakar, P., Chattopadhyay, G.N., Gangwar, S.K. & Ghosh, J. K. 2000. Effect of foliar application of Azotobacter, Azospirillum and Beijerinckia on leaf yield and quality of mulberry (Morus alba). J. Agric. Sci.134: 227-234.

Sumathi J, C. & Raghukumar, C. 2009. Anaerobic denitrification in fungi from the coastal marine sediments of Goa, India. Mycol. Res. 113: 100-109.

Soemarwoto, O. 1991. Indonesia Dalam Kancah Isu Lingkungan Global. PT Gramedia Pustaka Utama, Jakarta.

Shoji, S., Delgado, J., Mosier, A. & Miura, Y., 2001. Use of controlled release fertilizers and nitrification inhibitors to increase nitrogen use efficiency and to conserve air and water quality. Commun. Soil Sci. Plant Anal. 32 : 1051-1070.

Soliman, S., Seeda, M.A., Aly, S.S.M. & Gadalla, A.M. 1995. Nitrogen Fixation by wheat plants as affected by nitrogen fertilizer Levels an non-symbiotic bacteria. Egyptian J. Soil Sci. 35: 401-413.

Sorensen, J. 1997 The rhizosphere as a habitat for soil microorganisms. In: Modern soil Microbiology (J.D.V Elsas, J.T.Trevors & E.M.K. Wellington, eds). Marcel Dekker, New York. pp. 56-78.

Sorger, G.J. 1969. Regulation of nitrogen fixation in Azotobacter vinelandii OP: the role of nitrate reductase. J. Bacteriol. 98: 56-61.

Stephen, J.R., Kowalchuk, G.A., Bruns, M.V., McCaig, A.E., Phillips, C.J., Embley, T.M. & Prosser, J.I. 1988. Analysis of b-subgroup proteobacterial ammonia oxidizer populations in soil by denaturing gradient gel electrophoresis analysis and hierarchical phylogenetic probing. Appl. Environ. Microbiol. 64: 2958-2965.

Stephens, J.H.G. & Rask, H. M. 2000. Inoculant production and formulation. Field. Crops. Res. 65: 249-258.

Stevens, R.J. & Laughlin, R.J. 1998. Measurement of nitrous oxide and di-nitrogen emissions from agricultural soils. Nutr. Cycl. Agroecosyst. 52: 131-139.

Stevens, R.J. Laughlin, R.J. Burns, L.C. Arah, J.R.M. & Hood, R.C. 1997. Measuring the contributions of nitrification and denitrification to the flux of nitrous oxide from soil. Soil Biol. Biochem. 29: 139-151.

Stralis-Pavese, N., Bodrossy, L., Reichenauer, T.G., Weilharter, A. & Sessitsch,

PENGARUH PEMBERIAN PUPUK HAYATI PENAMBAT NITROGEN PADA EMISI GAS N2O DIPERTANIAN LAHAN KERINGENDAH RETNANINGRUMUniversitas Gadjah Mada, 2014 | Diunduh dari http://etd.repository.ugm.ac.id/

Page 28: PERTANIAN LAHAN KERING ENDAH RETNANINGRUM 196etd.repository.ugm.ac.id/downloadfile/77543/potongan/S3-2014-306466... · 196 DAFTAR PUSTAKA Adisarwanto, T. & Widyastuti, Y.E. 2004.

223

A. 2006. 16S rRNA based T-RFLP analysis of methane oxidising bacteria: Assessment, critical evaluation of methodology performance and application for landfill site cover soils. Appl. Soil Ecology. 31: 251-266.

Subekti, N.A., Syafruddin., Efendi, R. & Sunarti, S. 2008. Morfologi tanaman dan fase pertumbuhan jagung. In: Jagung: Teknik Produksi dan Pengembangan. Balai Penelitian Tanaman Serealia, Maros. Sulawesi. pp. 16-28.

Taiz, L. & Zeiger, E. 2010. Plant physiology, 5th edition. Sinauer Associates Publishers, Sunderland, MA.

Takaya, N. 2002. Dissimilatory nitrate reduction metabolisms and their control in fungi. J. Biosci. Bioeng. 94: 506-510.

Takaya, N. & Shoun, H. 2000. Nitric oxide reduction, tha last step in denitrification by Fusarium oxysporium, is obligatory mediatd by cytochrome P-450nor. Mol. Gen. Genet. 263: 342-348.

Tan, K.H. 1993. Environmental Soil Science. Marcel Dekker. Inc. New York Tan, I Y. S., Duxbury, J.M., Melkonian, J.J., Schindelbeck, R.R., Geohring, L.D.,

Hively, W.D. & Moebius, B.N. 2009. Single-event nitrous oxide losses under maize production as affected by soil type, tillage, rotation, and fertilization. Soil Till. Res. 102: 19-26.

Tarlera, S. & Denner, E. B. M. 2003. Sterolibacterium denitrificans gen. nov., sp. nov., a novel cholesterol-oxidizing, denitrifying member of the [beta]-Proteobacteria. Inter. J. Evol. Microbiol. 53: 1085-1091.

Tebbe, C. C. & Vahjen, W. 1993. Interference of humic acids and DNA extracted directly from soil in detection and transformation of recombinant DNA from bacteria and a yeast. Appl. Environ. Microbiol. 59: 2657-2665.

Theerachat, M., Virunanon, C., Chulalaksananukul, S., Sinbuathong, N. & Chulalaksananuku, W. 2010. NirK and nirS nitrite reductase genes from nonagricultural forest soil bacteria in Thailand. J. Microbiol. Biotechnol. 10: 15-21.

Thomas, K.L., Lyloyd, D., & Boddy, L. 1994. Effects of oxgen, pH, nitrate concentration on denitrification by Psedumonas sp. FEMS Microbiol. Lett. 118 : 181-186.

Thomson, A.J., Giannopoulos, G., Pretty, J., Baggs, E.M. & Richardson, D.J. 2012. Biological sources and sinks of nitrous oxide and strategies to mitigate emissions. Phil. Trans. R. Soc.367: 1157-116.

Thornton, F.C. & Valente, R.J. 1996. Soil emissions of nitric oxide and nitrous oxide from no-till corn. Soil. Sci. Soc. Amer. J. 60: 1127-1133.

Tiedje, J.M. 1988. Ecology of denitrification and dissimilatory nitrate reduction to ammonium. In: Environmental Microbiology of Anaerobes (Zehnder, A.J.B, ed). John Wiley & Sons, New York. pp: 179-244.

Tiedje, J.M., Asuming-Brempong, S., Nusslein, K., Marsh, T.L. & Flynn, S.J. 1999. Opening the black box of soil microbial diversity. Appl. Soil Ecol. 13: 109-122.

Thies, J.E. 2007. Soil microbial community analysis using terminal restriction fragment length polymorphisms. Soil Sci. Soc. Am. 71: 579-591.

PENGARUH PEMBERIAN PUPUK HAYATI PENAMBAT NITROGEN PADA EMISI GAS N2O DIPERTANIAN LAHAN KERINGENDAH RETNANINGRUMUniversitas Gadjah Mada, 2014 | Diunduh dari http://etd.repository.ugm.ac.id/

Page 29: PERTANIAN LAHAN KERING ENDAH RETNANINGRUM 196etd.repository.ugm.ac.id/downloadfile/77543/potongan/S3-2014-306466... · 196 DAFTAR PUSTAKA Adisarwanto, T. & Widyastuti, Y.E. 2004.

224

Tilak, K.V.B.R., Singh, C.S., Roy, N.K. & Subba Rao, N.S. 1982. Azosprillum brasilense and Azotobacter chroococcum inoculum: effect on yield of maize (Zea mays) and sorghum (Sorghum bicolor). Soil Biol. Biochem. 14: 417-418.

Tiquia,S.M., J. Lloyd, D.A. Herms,H. A.J. Hoitink, F. C. & Michel, J. R. 2002. Effects of mulching and fertilization on soil nutrients, microbial activity and rhizosphere bacterial community structure determined by analysis of TRFLPs of PCR-amplified 16S rRNA genes. Appl. Soil. Ecol. 21: 31-48.

Tokuda, S. & Hayatsu, M. 2004. Nitrous oxideflux from a teafield amended with a large amount of nitrogen fertilizer and soil environmental factors controlling the flux. Soil Sci. Plant Nutr. 50: 365-374.

Tomlinson, G. A., Jahnke, L. L. & Hochstein, L. I. 1986. Halobacterium denitrificans sp. nov., an extreme halophilic denitrifying bacterium. Int. J. Syst. Bacteriol. 36: 66-70.

Tonouchi, A. 2009. Isolation and characterization of a novel facultative anaerobic filamentous fungus from Japanese rice field soil. International J. Microbiol.1383: 1-9 http://dx.doi.org/10.1155/2009/571383

Torsvik V., Goskoyr J. & Daae F.L. 1990. High diversity in DNA of soil bacteria. Appl. Environ. Microbiol. 56 : 782-787.

Toyoda, S., Yano, M., Nishimura, S., Akiyama, H., Hayakawa, A., Koba, K., Sudo, S., Yagi, K., Makabe, A., Tobari, Y., Ogawa, N., Ohkouchi, N., Yamada, K. & Yoshida, N. 2011. Characterization and production and consumption processes of N2O emitted from temperate agricultural soils determined via isotopomer ratio analysis. Global Biogeochem. Cycl. 25: 2008-2020.

Tsai, Y.L. & Olson, B.H. 1992. Rapid method for separation of bacterial DNA from humic substances in sediments for polymerase chain reaction. Appl. Environ. Microbiol. 58: 2292-2295.

Usuda, K. Toritsuka, N, Matsuo, Y., Kim, D.H & Shoun, H. 1995. denitrification by fungus Cylindrocarpon tonkinense: Anarobic cell growth and two isozymes form of cytochrome P-450 nor. Appl. Environ. Microb. 3: 883-889.

Vallejo, A., Garcia-Torres, L., Diez, J., Arce, A. & Lopez-Fernandez, S. 2005. Comparison of N losses (NO3

-, N2O, NO) from surface applied, injected or amended DCD pig slurry of an irrigated soil in a Mediterranean climate. Plant Soil. 272: 313-325.

Van-Etten J. L. 2003. Unusual life style of giant chlorella viruses. Annu. Rev. Genet. 37:153-195.

Vanniel, E. W. J., Braber, K. J., Robertson, L. A. & Kuenen, J. G. 1992. Heterotrophic nitrification and aerobic denitrification in Alcaligenes faecalis. Anton. Leeuw. Inter. J. Gener. Mol. Microbiol. 62: 231-237.

Vargas, L.K., Lisboa, B.B., Schlindwein, G., Granada, C.E., Giongo, A., Beneduzi, A., Passaglia, A. & Luciane-Maria P. 2009. Occurrence of plant growth-promoting traits in clover-nodulating rhizobia strains

PENGARUH PEMBERIAN PUPUK HAYATI PENAMBAT NITROGEN PADA EMISI GAS N2O DIPERTANIAN LAHAN KERINGENDAH RETNANINGRUMUniversitas Gadjah Mada, 2014 | Diunduh dari http://etd.repository.ugm.ac.id/

Page 30: PERTANIAN LAHAN KERING ENDAH RETNANINGRUM 196etd.repository.ugm.ac.id/downloadfile/77543/potongan/S3-2014-306466... · 196 DAFTAR PUSTAKA Adisarwanto, T. & Widyastuti, Y.E. 2004.

225

isolated from different soils in Rio Grande do Sul State. R. Bras. Ci. 33: 1227-1235.

Veldkamp, E., Keller, M. & NuNez, M. 1998. Effects of pasture management on N2O and NO emissions fromsoils in the humid tropics of Costa Rica. Global Biogeochem. Cycl. 12: 71-79.

Velthof, G.L., Kuikman, P.J. & Oenema, O., 2003. Nitrous oxide emission from animal manures applied to soil under controlled conditions. Biol. Fertil. Soils. 37 : 221-230.

Velthof, G., Hoving, I., Dolfing, J., Smit, A., Kuikman, P. & Oenema, O. 2010. Method and timing of grassland renovation affects herbage yield, nitrate leaching, and nitrous oxide emission in intensively managed grasslands. Nutr. Cycl. Agroecosyst. 86:401-412. http://dx.doi.org/10.1007/s10705-009-9302-7

Venterea, R.T., Burger, M. & Spokas, K.A., 2005. Nitrogen oxide and methane emissions under varying tillage and fertilizer management. J. Environ. Qual. 34: 1467-1477.

Verma, J.P., Yadav, J., Tiwari, K.N. & Singh, V. 2010. Impact of plant growth promoting rhizobacteria on crop production. Int. J. Agric. Res. 5: 954-983.

Vessey, J.K. 2003. Plant growth promoting rhizobacteria as biofertilizers. Plant Soil. 55: 571-586. http://dx.doi.org/10.1023/A:1026037216893

Virtanen, A.I., Jorma, J., Linkola, H. & Linnasalmi, A. 1947. On the relation between nitrogen fixation and leg-haemoglobin content of leguminous root nodules. Acta Chem. Scand. 1: 90-111.

Vitousek, P.M., Cassman, K., Cleveland, C., Crews, T., Field, C.B., Grimm, N.B., Howarth, R.W., Marino, R., Martinelli, L., Rastetter, E.B. & Spent, J.I., 2002. Towards an ecological understanding of biological nitrogen fixation. Biogeochem. 58: 1-45.

Vlek, P.L.G. & Carter, M.F. 1983. The effect of soil environment and fertilizer modifications on the rate of urea hydrolysis. Soil Sci. Soc. Am. J. 136: 56-63.

Volkl, P., Huber, R., Drobner, E., Rachel, R., Burggraf, S., Trincone, A. & Stetter, K. O. 1993. Pyrobaculum aerophilum sp. nov., a novel nitrate-reducing hyperthermophilic archaeum. Appl. Environ. Microbiol. 59: 2918-2926.

Vos, J., Van der Putten, P.E.L., Hussein, M.H., Van Dam, A.M. & Leffelaar, P.A. 1998. Field observation on nitrogen catch crops: II. Root length and root length distribution in relation to species and nitrogen supply. Plant Soil. 201: 149-155.

Wang, L. & Cai, Z. 2008. Nitrous oxide production at different soil moisture contents in an arable soil in China. Soil Sci. Plant Nutr. 54: 786-793.

Wang L.F, Cai, Z.C. & Yan, H. 2004: Nitrous oxide emission and reduction in a laboratory-incubated paddy soil: response to water pre-treatment. J. Environ. Sci. 16: 253-257.

PENGARUH PEMBERIAN PUPUK HAYATI PENAMBAT NITROGEN PADA EMISI GAS N2O DIPERTANIAN LAHAN KERINGENDAH RETNANINGRUMUniversitas Gadjah Mada, 2014 | Diunduh dari http://etd.repository.ugm.ac.id/

Page 31: PERTANIAN LAHAN KERING ENDAH RETNANINGRUM 196etd.repository.ugm.ac.id/downloadfile/77543/potongan/S3-2014-306466... · 196 DAFTAR PUSTAKA Adisarwanto, T. & Widyastuti, Y.E. 2004.

226

Wang, Y.P., Law, R.M. & Pak, B. 2010. A global model of carbon, nitrogen and phosphorus cycles for the terrestrial biosphere. Biogeochem. 7: 2261-2282.

Watmough, N.J., Field, S.J., Hughes, R.S.J.L. & Richardson, D.J. 2009. The bacterial respiratory nitric oxide reductase. Biochem. Soc. Transactions. 37: 392-399.

Weber, S., Lueders, T., Friedrich, M.W. & Conrad, R. 2001. Methanogenic populations involved in the degradation of rice straw in anoxic paddy soil. FEMS. Microbiol. Ecol. 38:11-20.

Weil, R. R. & Kroontje, W. 1979. Effects of manuring on the arthropod community in an arable soil. Soil. Biol. Biochem. 11: 669-679.

Weier, K.L., Doran, J.W., Power, J.F. & Walters, D.T. 1993. Denitrification and the dinitrogen/nitrous oxide ratio as affected by soil water, available carbon, and nitrate. Soil Sci. Soc. Am. J. 57: 66-72.

Weigel, J. & Kleiner, D. 1982. Survey of ammonium (methylammonium) transport by aerobic N2 fixing bacteria the special case of Rhizobium. FEMS. Microbiol. Lett. 15: 61-63.

Wibowo, S.T., Hamim & Wahyudi, A.T. 2009. Kandungan IAA, serapan hara, pertumbuhan dan produksi jagung dan kacang tanah sebagai respon terhadap aplikasi pupuk hayati. J. Pertanian Indonesia. 14: 174-183.

Widjojoatmodjo, M., Fluit, A.C. & Verhoef, J. 1994. Rapid identification of bacteria by PCR-single strand conformation polymorphism. J. Clinic.Microbiol. 32: 3002-3007.

Wilfinger, W.W., Mackey, K. & Chomczynski, P. 1997. Effect of pH and ionic strength on the spectrophotometric assessment of nucleic acid purity: Bio. Techniques. 22: 474-481.

Winter, F. P. & Eiland, F. 1996. The effect ofsoil pH on nitrification in coarse sandy soil. In: Progress in Nitrogen Cycling Studies (O. Van Cleemput, ed). Kluwer Academic Publishers, The Netherlands. pp. 655-658.

Wong, T. & Maier, R.J. 1985. H2-Dependent mixotrophic growth of N2-fixing Azotobacter vinelandii. J. Bacteriol. 163: 528-533.

Wrage, N., Velthof, G.L., Van Beusichem, M.L. & Oenema, O. 2001. Role of nitrifier denitrification in the production of nitrous oxide. Soil Biol. Biochem. 33: 1723-1732.

Wu, X.L., Fiedrich, M.W. & Conrad, R. 2006 Diversity and ubiquity of thermophilic methanogenic archaea in temperate anoxic soils. Environ. Microbiol. 8:394-404.

Xiong, Z., Xing, G., Tsuruta, H., Shen, S G., Shi, S. & Du, L. 2002. Field study on nitrous oxide emissions from upland cropping systems in China. Soil. Sci. Plant Nutr. 48: 539-546.

Xu, H., Jiang, R., Li, L. & Xiao, H., 2010. PCR–single-strand conformational polymorphism method for rapid detection of rifampin-resistant Mycobacterium tuberculosis: systematic review and meta-analysis J. Clinical Microbiol. 10: 3635-3640.

PENGARUH PEMBERIAN PUPUK HAYATI PENAMBAT NITROGEN PADA EMISI GAS N2O DIPERTANIAN LAHAN KERINGENDAH RETNANINGRUMUniversitas Gadjah Mada, 2014 | Diunduh dari http://etd.repository.ugm.ac.id/

Page 32: PERTANIAN LAHAN KERING ENDAH RETNANINGRUM 196etd.repository.ugm.ac.id/downloadfile/77543/potongan/S3-2014-306466... · 196 DAFTAR PUSTAKA Adisarwanto, T. & Widyastuti, Y.E. 2004.

227

Yamazaki, Y., Yoshida. N., Wada, E. & Matsuo, S. 1986. N2O reduction by Azotobacter vinelandii with emphasis on kinetic nitrogen isotope effects. Plant Cell Physiol. 28: 263-271.

Yamulki, S. 2006. Effect of straw addition on nitrous oxide and methane emissions from stored farmyard manures. Agric. Ecosyst. Environ. 112: 140-145.

Yang, L. & Cai, Z. 2006. Effects of shading soybean plants on N2O emission from soil. Plant Soil. 283: 265-274.

Yanni, Y.G. & El-Fattah, F.K.A. 1999. Towards integrated biofertilization management with free living and assosiative dinitrogen fixers for enhancing rice performance in the Nile Delta. Symbiosis. 27: 319-331.

Yanni, Y.G., Rizky, R.Y., Corich, V., Squartini, A., Ninke, K., Phililip-Holingsworth, S., Orgambide, G., de Bruijn, F., Stoltzfus, J., Buckley, D., Schmidt, T.M., Mateos, P.F., Ladha, J.K. & Dazzo, F.B. 1997. Natural endophitic association between Rhizobium leguminosarum bv. trifolii and rice and assesment of its potential to promote rice growth. Plant Soil. 194: 99-114.

Yeates, C, Gillings, M.R., Davidson, A.D., Al-Tavilla, N. & Veal, D.A. 1997. PCR amplification of crude microbial DNA extracted from soil. Lett. Appl. Microbiol., 25 :303-307.

Yinghong, W., Yuesi, W. & Hong, L 2010. A new carrier gas type for accurate measurement of N2O by GC-ECD. Adv. Atmospheric Sci. 27: 1322-1330.

Yoshimatsu, K. T., Sakurai, T. & Fujiwara, T. 2000. Purification and characterization of dissimilatory nitrate reductase from a denitrifying halophilic archaeon, Haloarcula marismortui. FEBS Lett. 470:216-220.

Yoshinari T., Hynes, R. & Knowles, R. 1977. Acetylene inhibition of nitrous oxide reduction and measurement of denitrification and nitrogen fixation in soil. Soil Biol. Biochem. 9: 177-183.

You, Y. Tataurov, A.V. & Owczarzy, N. 2011. Measuring thermodynamic DNA hybridization using fluorescence. Biopolymers. 95: 472-486.

Zablotowicz, R.M., Eskew, D.L. & Focht, D.D. 1978. Denitrification in Rhizobium. Can. J. Microbiol. 24: 757-760.

Zahir, Z.A., Shah, M.K., Naveed, M. & Akhter, M.J., 2010. Substrate-dependent auxin production by Rhizobium phaseoli improves the growth and yield of Vigna radiate L. under salt stress conditions. J. Microbiol. Biotechnol. 20: 1288-129.

Zaman M, Di, H.J., Cameron, K.C. , Frampton, C.M. 1999. Gross nitrogen mineralization and nitrification rates and their relationships to enzyme activities and the soil microbial biomass in soils treated with dairy shed effluent and ammonium fertilizer at different water potentials. Biol Fertil Soils. 29: 178-186.

Zaman, M. Nguyen, M..L., Blennerhassett, J.D. & Quin, B.F. 2008. Reducing NH3, N2O and NO3-N losses from a pasture soil with urease or nitrification inhibitors and elemental S-amended nitrogenous fertilizers. Biol. Fertil. Soil. 44: 693-705.

PENGARUH PEMBERIAN PUPUK HAYATI PENAMBAT NITROGEN PADA EMISI GAS N2O DIPERTANIAN LAHAN KERINGENDAH RETNANINGRUMUniversitas Gadjah Mada, 2014 | Diunduh dari http://etd.repository.ugm.ac.id/

Page 33: PERTANIAN LAHAN KERING ENDAH RETNANINGRUM 196etd.repository.ugm.ac.id/downloadfile/77543/potongan/S3-2014-306466... · 196 DAFTAR PUSTAKA Adisarwanto, T. & Widyastuti, Y.E. 2004.

228

. Zhang, J. & Han, X. 2008. N2O emission from the semi-arid ecosystem under

mineral fertilizer (urea and superphosphate) and increased precipitation in northern China. Atmospheric Environ. 42: 291-302. http://dx.doi.org/10.1016/j.atmosenv.2007.09.036

Zhang, L., Xu Z.H. & Patel, B.K.C. 2009. An improved method for purifying genomic DNAfrom forest leaf litters and soil suitable for PCR. J. Soils Sediments. 9 :261-266.

Zhang ,Y.L., Liu, J., Mu, Y., Xu., Z., Pei, S., Lun, X. and Zhang, Y. 2012. Nitrous oxide emissions from a maize field during two consecutive growing seasons in the North China. Plain. J. Environ. Sci. 24: 160-68.

Zhaorigetu, Komatsuzaki, M., Sato, Y. & Ohta, H. 2008. Relationships between Fungal Biomass and Nitrous Oxide Emission in Upland Rice Soils under No Tillage and Cover Cropping Systems. Microbes Environ. 23: 201-208.

Zhou, J.Z., Bruns, M.A & Tiedje, J.M. 1996. DNA recovery from soils of diverse composition. App. Environ. Microbiol. 62 :316-322.

Zumft, W.G. 1997. Cell biology and molecular basis of denitrification. Microbiol. Mol.Biol. Rev. 61: 233-616.

Zumft, W.G. 1992. The denitrifying procaryotes. In: Procaryotes: a handbook of the Biology of Bacteria Ecophysiology, Isolation, Identification, Application. (K. Ballowa, ed). Springer, New York. pp. 554-582.

PENGARUH PEMBERIAN PUPUK HAYATI PENAMBAT NITROGEN PADA EMISI GAS N2O DIPERTANIAN LAHAN KERINGENDAH RETNANINGRUMUniversitas Gadjah Mada, 2014 | Diunduh dari http://etd.repository.ugm.ac.id/