Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical...

49
Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004

Transcript of Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical...

Page 1: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

Near Infrared Devices in Biomedical Applications

Elisabeth S. Papazoglou, Ph.D.

School of Biomedical Engineering

Drexel University

October 2004

Page 2: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

Outline

- BIOMEDICAL PHOTONICS- OPTICAL PROPERTIES OF TISSUE- RADIATIVE TRANSPORT MODEL

- Diffusion approximation- NIR WINDOW- PHOTON MIGRATION SPECTROSCOPY

- Frequency Domain - ADVANTAGES / DISADVANTAGES- APPLICATIONS- ETHICAL CHALLENGES

Page 3: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

Biomedical Photonics

• Biomedical Photonics vs. Biomedical Optics• Electromagnetic spectrum

– Gamma rays - 1019

– X-rays - 1nm to 1 Angstrom / 1018 Hz

– Ultra violet - 1016 - 1017 Hz

– Visible - 1015 Hz

– Infrared (near and far) 1 mm - 1 micron / 10 - 1012 Hz

– Microwave - 1 cm / 108 - 1012 Hz

– Radio frequency - 1 m / 108 Hz

Page 4: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

ELECTROMAGNETIC SPECTRUM

QuickTime™ and aTIFF (Uncompressed) decompressor

are needed to see this picture.

QuickTime™ and aTIFF (Uncompressed) decompressor

are needed to see this picture.

Page 5: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

QuickTime™ and aTIFF (Uncompressed) decompressor

are needed to see this picture.

Page 6: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

QuickTime™ and aTIFF (Uncompressed) decompressor

are needed to see this picture.

http://www.phy.ntnu.edu.tw/java/emWave/emWave.html

Wave Animation

Page 7: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

QuickTime™ and aTIFF (Uncompressed) decompressor

are needed to see this picture.

Page 8: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

WHAT IS LIGHT ?

• Classical Viewpoint – Light is a oscillating EM field / E is continuous– Electromagnetic wave

• Electric / Magnetic Field - Polarization

• Quantum Viewpoint– Photons - E = h

• Both representations are used to describe light propagation in tissues

Page 9: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

WHAT IS LIGHT ?

• Classical Viewpoint – Light is a oscillating EM field / E is continuous– Electromagnetic wave

• Electric / Magnetic Field - Phase and Polarization

• Quantum Viewpoint– Photons - E = h

• Both representations are used to describe light propagation in tissues

Page 10: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

Fundamental Optical Properties

• Index of refraction, n ()• Scattering Cross Section, s

• Differential Scattering Cross Section• Absorption cross section, a

Page 11: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

Index of Refraction

n≈

=n(λ)−iα(λ)Complex Index of Refraction

Re[n≈

(λ )] = n(λ )

Index of Refraction = Real Part

Phase velocity and wavelength of light in medium

cm (λ ) =c

n(λ )Wave Frequency - independent of n

m =λ

n(λ )

=c

λ=

cm

λ m

Page 12: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

1

2

nn

2 =n1

n2

λ1

sinθ2 =n1

n2

sinθ1

Page 13: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

Reflection and Refraction

• Light path redirection due to boundary– Reflection and Refraction– Snell’s Law Normal Incidence

sinθ2 =n1

n2

sinθ1

T =4n1n2

(n1 + n2)2

R =1− T =(n1 − n2)2

(n1 + n2)2

REFLECTION

Page 14: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

TYPES OF REFLECTION

• Interface Reflection = Fresnel Reflection

• Diffuse Reflectance – Subsurface origin

Page 15: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

Scattering

Incident Wave Scattered Wave

n1

n2

Page 16: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

Biomedical Applications - Scattering

• Diagnostic Applications– Size, Morphology, Structure– Lipid membranes, nuclei, collagen fibers

• Therapeutic Applications– Optimal Light Dosimetry (Light treatment)

- Delivery

Page 17: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

Scattering Cross Section

s(s)^

= PscattI0

S is propagation direction of wave relative to scatterer

Scattering Coefficient

Mean Free Path

μs = ρσ s

l =1

μ s

Page 18: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

Absorption Cross Section

Absorption Coefficient

Absorption Mean Free Path= Absorption length

a =Pabs

I0

μa = ρσ a

la =1

μa

Page 19: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

Beer Lambert Law

dI = −μaIdz

I = I0 exp[−μaz]

I = I0 exp[−ελ az]

Extinction Coefficient (cm2 /mol)

Molar concentration mol/cm3

TRANSMISSION

T=I/I0

A = OD = log10(I0 /I) = −log10(T)ATTENUATIONABSORBANCE

Page 20: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

Absorption and Emission

• Absorption Spectrum - Dependence

• Absorbed Light is dissipated

Photon emission Non radiatively /Kinetic energy transfer

Luminence Fluorescence, Phosphorescence

Page 21: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

Coherent and Incoherent Light

• Coherence– Ability to maintain non random phase

relationship in space and time and exhibit stable interference effects

• Speckle pattern from laser (light amplification by stimulated emission of radiation)

• Incoherent light– Random spatial and temporal phase patterns– No Interference

Page 22: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

Rayleigh Limit• Tissue structure size << Photon Wavelength

– Rayleigh Limit- Scatterer sees uniform electric field - Dipole moment can be mathematically expressed

– Elastic scattering / • Energy incident photon = Energy Scattering Photon

• INELASTIC SCATTERING - RAMAN

– LOSE ENERGY - STOKES

– GAIN ENERGY = ANTI-STOKES

1,000,000 Rayleigh photons for

1 Raman photon

Page 23: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

Mie Theory

• Light scattering by spherical objects -

– Any size to wavelength ratioMie regime - where wavelength and scatterer are of the

same order of magnitude- Biomedical Applications = 500 to 1000 nm wavelength- Many cellular structures are of similar size

Page 24: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

Absorption

• Energy is “extracted” from the light by molecules

• Diagnostic Applications - Energy Transitions at certain wavelengths - fingerprints

• Therapeutic Applications - Absorption of energy from a laser is the primary mechanism

- Electronic, Vibrational, Rotational Levels

Page 25: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

E total (r, t) = E1(r, t) + E2(r, t)

Some concepts - Interference Contribution

Total Electric Field - Two light scatterers

U(r) = εE total (r) ⋅E total (r) = ε[E12(r) + E2

2(r) + 2E1(r) ⋅E2(r)]

= U1(r) + U2(r) + 2εE1(r) ⋅E2(r)

Total Energy = Square of Amplitude

= medium permittivityE1

. E2 > 0 constructive interferenceE1

. E2 < 0 destructivee interference

Average Interference E1 . E2 = 0

Page 26: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

Multiple Scattering

L

L

P(z)

Pscatt = P(z)σ sρL

P(z + L) =

P(z)(1−σ sρL)

Page 27: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

Mutliple Scattering - “Decoherence”Radiation Transport Model

I0σ sρΔz = I0μ sAΔz = I0σ sN layer

Power Scattered Out of Incident Wave

Remaining power after passing through layer

Pc (0 + Δz) = I0A − I0σ sρAΔz = I0A(1−σ sρΔz)

Meaning of

(1−σ sρΔz)

What is it if it is zero???

Page 28: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

L = ΓΔz

Pc (L) = I0A(1−σ sρΔz)Γ = I0A(1−σ sρL

Γ)Γ

Layers in length L of thickness deltaz

As increases --- exponential convergence

I0A(1−σ sρL

Γ)Γ → I0Aexp(−σ sρL)

No absorption -

Pscatttotal = Ic (0)A − Ic (L)A = I0A(1− exp[−σ sρL])

= I0A(1− exp[−σ sN / A])

Power Expansion

1− exp[−σ sN / A] = −(−σ sN / A)m

m!m=1

= s

AN −

1

2

σ s2

A2N 2 +

1

6

σ s3

A3N 3 + ..

Page 29: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

Limiting Cases

• When can we say

Ptotalscatt = NI0σ s

Waves Scattered only Once

Multiple versus Single Scattering

μsL <<1

Page 30: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

Radiation Transport(Boltzmann Equation)

1

cm

∂I(r, ˆ s , t)

∂t= −ˆ s ⋅

r ∇I(r, ˆ s , t) − (μa + μ s)I(r, ˆ s , t)

+μa + μ s

4πp(ˆ s ⋅ ˆ ′ s )I(r, ˆ ′ s , t)d ′ Ω + Q(r, ˆ s , t)

DYNAMICS

Page 31: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

dA

r

ˆ s

d

dP = I(r, ˆ s , t)cosθdadΩ

Light power - Specific intensity I

Page 32: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

Incident and Diffuse Light

I(r, ˆ s , t) = Ic (r, ˆ s , t) + Id (r, ˆ s , t)

1

cm

∂Ic (r, ˆ s , t)

∂t+ ˆ s ⋅

r ∇Ic (r, ˆ s , t) = −(μa + μ s)Ic (r, ˆ s , t)

Coherent Light

Coherent and Incoherent Light

1

cm

∂Id (r, ˆ s , t)

∂t+ ˆ s ⋅

r ∇Id (r, ˆ s , t) = −(μa + μ s)Id (r, ˆ s , t)

+μa + μ s

4πp(ˆ s ⋅ ˆ ′ s )Id (r, ˆ ′ s , t)d ′ Ω + Q(r, ˆ s , t)

+μa + μ s

4πp(ˆ s ⋅ ˆ ′ s )Ic (r, ˆ ′ s , t)d ′ Ω

Page 33: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

Incident and Diffuse Light

1

cm

∂Id (r, ˆ s , t)

∂t+ ˆ s ⋅

r ∇Id (r, ˆ s , t) = −(μa + μ s)Id (r, ˆ s , t)

+μa + μ s

4πp(ˆ s ⋅ ˆ ′ s )Id (r, ˆ ′ s , t)d ′ Ω + Q(r, ˆ s , t)

+μa + μ s

4πp(ˆ s ⋅ ˆ ′ s )Ic (r, ˆ ′ s , t)d ′ Ω

μa + μ s

4πp(ˆ s ⋅ ˆ ′ s )Ic (r, ˆ ′ s , t)d ′ Ω

4 π

∫ - Single scattering

0 at steady state

0 = ignore multiple scattering

Page 34: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

Absorption Dominant Limit

ˆ s ⋅r

∇Id (r, ˆ s ) = −(μa + μ s)Id (r, ˆ s )

+μa + μ s

4πp(ˆ s ⋅ ˆ ′ s )Ic (r, ˆ ′ s )d ′ Ω

Straight line path of length s parallel to s^ is

dId

ds(r, ˆ s ) = −(μa + μ s)Id (r, ˆ s ) +

μa + μ s

4πp(ˆ s ⋅ ˆ ′ s )Ic (r, ˆ ′ s )d ′ Ω

4 π

dy

ds+ P(s)y = Q(s) ---- Remember????

Page 35: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

Scattering Phase Function

SPF = Fraction of light scattered in s from incidence at s’

p(ˆ s ⋅ ˆ ′ s ) =4π

σ s + σ a

dσ s

dΩ(ˆ s ⋅ ˆ ′ s )

W0 =1

4πp(ˆ s ⋅ ˆ ′ s )d ′ Ω =

σ s

σ s + σ a4 π

∫ =μ s

μ s + μa

G= average cosine of scatter = measure of scatter retained in the forward direction

g =1

2W0

p(cosθ)cosθ sinθdθ4 π

Page 36: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

Limits of g

• g=0 for Rayleigh scattering – Forward and backward scattering are equally

probable

• g > 0

• g< 0

• G is an “anisotropy measure”

Page 37: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

Scattering Dominant Limit: The Diffusion Approximation

′ μ s = (1− g)μ s

D =cm

3(μa + (1− g)μ s)

μ t ' ≡ μa + (1− g)μ s

Reduced Scattering Coefficient

Diffusion Coefficient

Attenuation of medium

Page 38: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

Diffusion Equation

Id (r, ˆ s , t) ≅1

4πΦd (r, t) +

3

4πFd (r, t)ˆ s f ⋅ ˆ s

Φd (r, t) = Id (r, ˆ s , t)dΩ4 π

Fd (r, t) = Fd (r, t)ˆ s f = Id (r, ˆ s , t)ˆ s dΩ4 π

Total Intensity

Angular Dependence of specific intensity

Net Intensity Vector

1

c

∂tΦd (r, t) +

r ∇ ⋅Fd (r, t) = −μaΦd (r, t) + Qc + Qs

cmFd (r, t) = −Dr

∇Φd (r, t)

∂tΦd (r, t) = −D∇ 2Φd (r, t) − μacmΦd (r, t) + Qc + Qs

Fick’s Law

Page 39: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

Discussion PointsHuman Tissue -Effective Refractive Index

Water - Index? Compare to other constituents?

Melanin - ?

Whole tissue ? Brain / Kidney?

Tooth ??

Index mismatch between lipids and cytoplasm

Page 40: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

Scattering Properties

Size of organelles in cells = 100 nm -6 micron

Mitochondria are primary scatterers - 0.5-2 microns

Cell Nucleus = 4-6 micron in range

Melanosomes are 100 nm to 2 microns

Erythrocytes = 2 micron thick / 7-9 micron in diameter

Page 41: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

Absorption Properties

• Therapeutic Window - 600-1300 nm

• Orange to NIR

• 600 region - hemoglobin / oxy and deoxy

• < 600 DNA, Tryptophan and Tyrosine

• 900 -1000 Water Absorption is very strong

Page 42: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

Importance of Diffuse Light

• Diffuse reflectance

• Volume of tissue sampled

• Information about the bulk of the medium

• Limits of – Absorption Dominant Region– Scattering Dominant Region - Diffusion

Approximation

Page 43: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.
Page 44: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.
Page 45: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

Melanosomes

for light skinned caucasians, fv = 1-3%

for well-tanned caucasions and Mediterraneans, fv = 11-16%

for darkly pigmented Africans, fv = 18-43%.

[Jacques 1996]:

Page 46: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.
Page 47: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

Photon Migration Spectroscopy• Combine experiments with model based data analysis

• Absorption and scattering of highly scattering media• 600-1000 nm• Photons propagate randomly• Incoherent photons• Probes tissue vasculature

• BROAD MEDICAL APPLICATIONS

Page 48: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

FREQUENCY DOMAIN INSTRUMENTS

• PHASE SHIFT • MODULATION DECREASE = RATIO OF DC/AC• FREQUENCY OF OSCILLATION REMAINS THE SAME

AB = Log(Io /I) = ε[C]L

AB = AbsorbanceL=Photon Path length (cm)[C]= Absorber Concentration is the molar extinction coefficient moles/liter cm-1 or cm 2/mole

I = I0 exp(−μaL)

μa = 2.303ε[C]

What is L???

Page 49: Near Infrared Devices in Biomedical Applications Elisabeth S. Papazoglou, Ph.D. School of Biomedical Engineering Drexel University October 2004.

IMPORTANT POINTS

• Absorption and scattering coefficicents• Rayleigh Limit / Mie Theory / Mie regime• Define g - g = 0, g positive, g negative• Extinction Coefficient• Diffusion and Absorption Approximation• Diffuse Reflectance Spectroscopy• Therapeutic Window• Melanin as a confounding factor• Applications of NIR - Limitations