Molecular modelling of the domain structure offactor I of human ...
Mutations ofFactor VIII Cleavage Sites inHemophilia A
Transcript of Mutations ofFactor VIII Cleavage Sites inHemophilia A
Mutations of Factor VIII Cleavage Sites in Hemophilia A
1022 Blood, Vol 72, No 3 (September), 1988: pp 1022-1028
By Jane Gitschier, Scott Kogan, Barbara Levinson, and Edward G.D. Tuddenham
Hemophilia A is caused by a defect in coagulation factor
VIII, a protein that undergoes extensive proteolysis during
its activation and inactivation. To determine whether some
cases of hemophilia are caused by mutations in important
cleavage sites, we screened patient DNA samples for
mutations in these sites by a two-step process. Regions of
interest were amplified from genomic DNA by repeated
rounds of primer-directed DNA synthesis. The amplified
DNAs were then screened for mutations by discriminant
hybridization using oligonucleotide probes. Two cleavage
site mutations were found in a survey of 21 5 patients. A
nonsense mutation in the activated protein C cleavage site
at amino acid 336 was discovered in a patient with severe
C LASSIC HEMOPHILIA, or hemophilia A, is an X-
linked bleeding disorder resulting from a defect in
blood coagulation factor VIII. The mature protein, consist-
ing of 2,332 amino acids,”2 serves as a cofactor to activated
factor IX and is stabilized by von Willebrand’s factor
(vWF). Studies on both the plasma-derived protein and the
recombinant DNA-derived protein have demonstrated that
proteolytic cleavages are needed for the activation and
subsequent inactivation of the molecule.36 As shown in Fig I,
the 95 kd B domain is released from factor VIII by cleavages
at amino acid positions 740 and 1648, yielding the 90 and 80
kd fragments. Maximum activity correlates with the appear-
ance of the 50, 40, and 73 kd species, and inactivation with
the appearance of the 43 and 67 kd fragments.5’6 In vitro
mutagenesis has also demonstrated that the arginine residues
at positions 336, 372, and 1689 are important for proper
factor VIII activation and inactivation.7 In addition, the
epitopes for inhibitory antibodies have been mapped to
regions between amino acids 336 and 372 and 1648 and
1689,�” further implicating these sites as vital for factor
VIII function.
Two classes of mutations have been found to cause hemo-
philia A: partial gene deletions and TaqI site mutations.’2’5
Each class constitutes roughly 5% of the hemophilia DNA
samples surveyed. TaqI sites appear to be “hot spots” for
From the Howard Hughes Medical institute and Department of
Medicine, University of California, San Francisco; and Hemostasis
Research Group, Clinical Research Centre, Middlesex, England.
Submitted April 13, 1988; accepted May 12. 1988.
Supported by the Howard Hughes Medical Institute and grants
to E.G.D. T. from North East Thames Regional Health Authority
and the Hemophilia Society.
E.G.D. T. is a member ofthe MRC, Clinical Science Staff J.G. isan assistant investigator with the Howard Hughes Medical Insti-
tute.
Address reprint requests to Jane Gitschier, PhD. Howard Hughes
Medical Institute, U426, Box 0724, University of California, San
Francisco, CA 94143.
The publication costs ofthis article were defrayed in part by page
charge payment. This article must therefore be hereby marked
“advertisement” in accordance with 18 U.S. C. section 1734 solely toindicate this fact.
© 1988 by Grune & Stratton, Inc.‘WWi-4071/88/7203-0040$3.00/0
hemophilia. In another severely affected patient. a mis-
sense mutation results in a substitution of cysteine for
arginine in the thrombin activation site at amino acid 1689.
This defect is associated with no detectable factor VIII
activity. but with normal levels of factor VIII antigen. The
severe hemophilia in this patient was sporadic; analysis of
the mother suggested that the mutation originated in her
gametes or during her embryogenesis. The results demon-
strate that this approach can be used to identify factor VIII
gene mutations in regions of the molecule known to be
important for function.
a 1988 by Grune & Stratton, Inc.
mutagenesis because the recognition sequence includes a
CpG dinucleotide. The cytosine at CpG is often methylated
in mammalian DNA; a subsequent deamination of 5-methyl-
cytosine leads to an unrepaired transition to thymine. This C
to T transition causes nonsense and missense mutations at
five Taql sites in the factor VIII gene. The nonsense muta-
tions have been found in patients with severe hemophilia, and
the missense mutations in patients with moderate to mild
hemophilia, strongly implicating these mutations as the
cause of hemophilia.’6”7 Further evidence that TaqI muta-
tions are responsible for hemophilia is the coincident appear-
ance of hemophilia and the mutation in sporadic cases of
hemophilia A.’2”4
Codons for four of the six arginine residues present at
cleavage sites contain the CpG dinucleotide and thus are
candidates for cytosine to thymine transitions. The physio-
logical significance of cleavage sites suggests that even
missense mutations in these codons may lead to severe
hemophilia. Based on the TaqI mutation data, we reasoned
that a survey of hemophilia DNA samples should uncover
mutations at some of the arginine codons. We used a
two-step procedure to screen hemophilia DNA samples for
mutations at the four cleavage sites. Short segments of DNA
coding for the cleavage sites were amplified from hemophilia
DNA by the polymerase chain reaction technique.’8 These
amplified sequences were then screened for mutations by
discriminant hybridization of wild-type oligonucleotide
probes. This approach has led to the discovery of mutations
in activated protein C- and thrombin-cleavage sites in hemo-
philiacs.
MATERIALS AND METHODS
Samples. Subjects were hemophilia A patients at the Royal
Free Hospital, London, the University of California, San Francisco,
and Vanderbilt University, Nashville. Blood was collected in heparinor EDTA by venipuncture following informed consent, and DNAwas extracted from peripheral blood leukocytes as described previ-
ously.’9 DNA from two cell lines (4X and AL7) with normal factorVIII genes were used as controls.’�#{176}
Hematological assays. Factor VIII activity (VIII:C) was mea-sured on fresh plasma samples, collected in citrate, by the one-stage
assay as previously described.2’ The international reference prepara-tion supplied by the National Institute of Biological Standards (UK)was used as a primary standard and a pool of 20 normal plasmas was
used as the working standard. Factor VIII antigen (VIlI:Ag) was
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I SOkDa � 4OkDa
43 kDa
I� 73kDa
L 67k0a
FACTOR VIII CLEAVAGE SITE MUTATIONS 1023
mutation at codon 1689.
‘
�
II I IllE Al � � A2 I� B I I ‘� I c I C? I
I 90 kOa � 95 kDa � 80 kDa
ACTIVATiON
INACTIVATION
Fig 1 . Proteolytic cleavage sites in factor VIII. Mature factorVIII is a 2332 amino acid protein consisting of three types of
domains: a triplicated A domain (Al . A2. A3). a unique B domain.and a duplicated C domain (Cl and C2). Short acidic regions of
approximately 40 amino acids are located at the Al /A2 and B/A3boundaries. Factor Ila (thrombin) cleaves at amino acid positions372. 740. and 1 689. activating the molecule. Activated protein C
(APC) inactivates factor VIII by cleavage at amino acid 336. FactorXa cleaves at all four of these positions as well as at amino acid1 721 . The protein responsible for cleavage at position 1 648 is
unknown. but this cleavage occurs before or during secretion offactor VlII.7 The acidic spacers are bordered by the cleavage sitearginines at 336. 372 and 1 648. 1 689. Although all six cleavagesites are arginines. the codons for only four of them include the
CpG dinucleotide (336. 373. 1648. and 1689). Amino acid 1indicates the first amino acid of the mature protein. as describedby Wood et al.1 The cleavage products. and their correspondenceto activation and subsequent inactivation. are indicated below theprotein.
measured as described,22 using a polyclonal human antibody to
factor VIII in a one-stage immunoradiometric assay. The standard
used was a pool of 20 normal plasmas assumed to contain I unitVIII:Ag per milliliter-vWF antigen (vWF:Ag) was measured in a
fluid phase immunoradiometric assay using a polyclonal rabbit
antibody23 and the international reference preparation as the stan-dard.
DNA amplification. Short segments of genomic DNA were
amplified in vitro by a modification of the polymerase chain reaction
(PCR) technique.�24 Approximately 10 to 250 ng ofgenomic DNA
was incubated with 10 pmol of each oligonucleotide primer and 1
unit Taq polymerase (New England Biolabs, Beverly, MA) in a 25
�L reaction volume. Final concentration of the reagents in solution
were as follows: 17 mmol/L (NH4)2S04, 67 mmol/L TrisHCl, pH8.8, 6.7 mmol/L MgCl2, 170 �g/mL bovine serum albumin, 200
�mol/L each dGTP, dATP, dTTP, and dCTP. The mixture was
layered with 25 zL mineral oil to prevent evaporation. Following a
two minute denaturation at 94#{176}C,samples were amplified for 35cycles on a DNA Thermal Cycler (Perkin-Elmer Cetus, Norwalk,CT); each round consisted of I 5 seconds at 92#{176}C,one second at50#{176}C,and ten seconds at 70#{176}C.Occasionally a genomic DNA
sample was difficult to amplify. This problem was overcome by a
ten- to 20-fold dilution of the sample before amplification. One-tenth
of the amplified DNA was electrophoresed on a 5% polyacrylamide
minigel for inspection. For the carrier determination, one-tenth ofthe sample was digested in a volume of 30 �L. When samples from
individuals 1115 and 1110 were combined, one-twentieth of each
amplified sample was used.
Oligonucleotide hybridization. As described previously,24 20 �zL
amplified DNA was denatured by adding it to 180 �zL 0.4 N NaOH,25 mmol/L EDTA, and heating for two minutes at 95#{176}C.Sampleswere transfered to ice and distributed among four wells of a slot-blot
manifold onto nylon filters (Zetaprobe; Bio-Rad, Richmond, CA).Filters were hybridized to 32P-labeled 19-base oligonucleotide probes
(I to 2 million cpm/mL) in 5X SSPE, 5X Denhardt’s, and 0.5%
sodium dodecyl sulfate (SDS), for one to 18 hours at 41#{176}Cand
washed in 3 mol/L tetramethylammonium chloride (TMACL)
solution at 61#{176}C.25
Sequence analysis. The amplified 195-bp fragment from 4X
and H4 DNA was purified on a 5% polyacrylamide gel andsequenced directly using the method of Wong et al.26 Primer I 1.2
was end-labeled with gamma-32P-ATP using T4 polynucleotide
kinase. Approximately 0.3 pmol of amplified DNA was denaturedand annealed to 2 pmol of the labeled oligonucleotide by heating themixture to 95#{176}Cfor ten minutes in 50 mmol/L Tris HCI, pH 8.0, 5
mmol/L MgCl2, 50 mmol/L KC1, and 10 mmol/L dithiothreitol,
and then incubating at 37#{176}Cfor two minutes. The sample wassequenced by the dideoxy chain termination method27 using T7
DNA polymerase (Sequenase US Biochemical, Cleveland) accord-ing to the manufacturer’s protocol.
Amplified HlO and 4X control DNAs were digested with SstI andPstI (sites incorporated in the oligonucleotide primers), cloned into
an M I 3 vector, and sequenced using the Ti DNA polymerase
(Sequenase).
RESULTS
Table 1 lists the six arginine residues that are involved in
proteolysis of factor VIII. We have focused our attention on
Table 1 . Factor VIII Cleavage Sites
AminoAcid coiion and
Position Amino Acid Probable Mutation Protein Cleavage Physiological Role Location in Gene
336 CGA arg TGA stop
CAA gIn
APC. Xa Inactivation Exon 8
372 CGC arg TGC CyS
CAC his
Ia, Xa Activation Exon 8
740 AGA arg - Ila, Xa ?, 95 kd release Exon 14
1,648 CGG arg TGG trp
CAG gIn
? ?, 95 kd release Exon 14
1 689 CGC arg TGC CYS
CAC his
Ila, Xa Activation Exon 14
1,721 AGG arg - Xa ?, inactivation Exon 14/15
Probable mutation is the mutation expected by a C to T transition. A question mark indicates that the functional significance is not known. Evidence for
the role of cleavages is presented in Eaton et aIBB and Pittman and Kaufman.7 Amino acid 336 has been determined to be the site of cleavage by activated
protein C by N-terminal sequence analysis of cleaved peptides ID. Eaton, personal communication). Cleavage at this position is also proposed for factor
Xa and thrombin.�7 Sample H4 was found to contain the TGA nonsense codon at amino acid 336 and sample H1O contains the TGC cysteine missense
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the residues at positions 336, 372, 1650, and 1689 for several therefore were candidates for factor VIII cleavage site
reasons. First, the codons for amino acids 740 and 1721 do mutations.
not contain the CpG dinucleotide and therefore are unlikely The amplified H4 DNA did not hybridize to probe 1 1.3,
to be hot spots for mutation. In addition, in vitro mutagenesis designed to detect mutations in the activated protein-C
at these two positions had no effect on coagulant activity.7 cleavage site at amino acid 336 (Table 2, Fig 2). The sample
Furthermore, because codons 336 and 372 are clustered in hybridized to the three other probes. H4 DNA was re-
exon 8, and 1650 and 1689 in exon l4,20a11 four sites could be
examined by simultaneous amplification of two small
regions. By this strategy, each of the two target sites within
the amplified region serves as an internal positive control for
the amplification and hybridization of the other site.
The exon 8 and exon 14 regions of 195 bp and 207 bp,
respectively, were amplified with primers 1 1 .1 and I 1 .2, and
I 2.1 and 12.2 (Table 2). These primers anneal to their target
A B11.3 114 12.3 12.4
1 23 4 5 67 89 IOM H3 � #{149} �
.H4146 � #{149}�H7 � #{149}�H8 � #{149}�
207 bp (exon 14I......�
l95eeexon 8) H24 � �
sequences in denatured genomic DNA and direct DNA
synthesis in opposite and overlapping directions. By repeated H10 �
rounds of DNA denaturation, primer annealing, and DNA
synthesis at 70#{176}C,the target sequences, including possible
mutations, are faithfully replicated and amplified several
Hil � �
H12 �
H13
H14 -
hundred thousand-fold. Figure 2 shows the result ofsimulta- H16
neous amplification of the exon 8 and I 4 regions from
hemophilia DNAs.
Aliquots of the amplified DNAs were denatured and
dotted onto four separate nylon filters. Each of the four
filters was hybridized to one of the 32P-end-labeled oligonu-
Fig 2. Screen of hemophilia DNA samples for cleavage sitemutations. In the first step of this two-step procedure. two smallregions of the factor VIII gene are simultaneously amplified fromhemophilia DNA samples. Repeated rounds of oligonucleotide
primer-directed DNA synthesis result in 195-bp and 207-bp frag-
cleotide probes (1 1 .3, 1 1 .4, 1 2.3, and I 2.4; Table 2). The ments containing the cleavage site codons 336 and 372. and 1650
centers of the I 9-base oligonucleotides are positioned on the
CpG of the cleavage-site arginine codons. Following hybrid-
ization, the filters were washed at 61#{176}Cwith a 3 mol/L
tetramethylammonium chloride solution (TMACL).25 Sin-
and 1 689. respectively. The success of the amplification is moni-tored by visualizing the amplification products on a polyacrylamidemini-gel. an example of which is given in (A). Amplified samplesare shown in lanes 1 through 10. DNA amplified from a normalcontrol cell line is shown in lane 1. The H4 and HlO DNAs are
gle-base mismatches can be easily discriminated in TMACL
because only a perfectly matched hybrid of probe and DNA
is sufficiently stable to survive the 6 1#{176}Cdenaturation tem-
perature. A total of 2 1 5 hemophilia DNA samples were
shown in lanes 4 and 9. respectively. and the remaining lanes areother hemophilia samples. HaeIII-digested PhiX 1 74 DNA are themolecular weight standards in lane M. In the second step of the�reening proceciure (B). amplified DNA samples were dotted ontonylon membranes using a �sIot-blot’� manifold. The filters were
amplified and screened for mutations by testing their ability
to hybridize to the wild-type probes. Samples examined
included I 56 patients with severe hemophilia A (< I % nor-
mal factor VIII activity), nine with moderate hemophilia
incubated with �P-labeled. 1 9-base oligonucleotide probes ofwild-type sequence (Table 2). Under stringent washing conditionsof 61’C in a 3 mol/L tetramethylammonium chloride solution. onlyperfectly matched hybrids between probe and amplified DNA arestable. Mutations in the amplified samples result in dissociation of
(1% to 5% activity) and 24 with mild hemophilia (5% to the mismatched hybrid. Probes 11.3. 11.4. 12.3. and 12.4 were
50%). Twenty-nine of the severe patients produce anti-factor
VIII antibodies (inhibitors). The activity level in 26 patients
was unknown. In this population, two amplified DNAs, H4
found to bind stably in all amplified samples except H4 and HlO.implicating codons 336 and 1689 as mutation sites in these
samples. Shown are examples of two such screening experiments.Samples H3-H24 were screened together. and Hl0-H16 were
and H I 0, failed to hybridize to one of the four probes and screened together.
1024 GITSCHIER ET AL
Table 2. Oligonucleotide Primers and Probes
Exon Primers probes
8
14
1 1 . 1 5’GGAAGCTTATGTCAAAGTAG
1 1 .2 5’TAATGTACCCAAGTTTTAGG
1 2. 1 5’CTGAGCTCTCAAAACCCACC
1 2.2 5’CACTGCAGCAATAAAATAGT
1 1 .3 5’CCCCAACTACGAATGAAAA
PQ LR M K N
336
1 1 .4 5’ATCCAAATTCGCTCAGTTG
IQIRSVA
372
1 2.3 5’CGCCATCAACGGGAAATAA
RHQREIT
1648
1 2.4 5’CAGAGCCCCCGCAGClTrC
QSPRSFQ
1689
Arginine positions are ba sad on mature factor VIII amino acid positions as described by Wood et al.’
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A
B
C
II
Ill � �4I5
IV#{216}�
1 2
VIII:C% VIII:Ag% VWF:Ag%
1115(Propositus) 0 96 69
1110 (Mother) 74 127 94
113 (Sister) 84 84 89
11158AL7 1115 1110 1110 M
202 bp-
164bp -
;!�-J 1�t1
GATC GATC
CONTROL H1O
FACTOR VIII CLEAVAGE SITE MUTATIONS 1025
amplified using primers 1 1 . 1 and I I .2 and was sequenced
“directly”26 by the additon of 32P-labeled 1 1 .2 primer. Figure
3 demonstrates that the CGA arginine codon is mutated to a
TGA stop codon in the H4 DNA. This nonsense mutation
would result in a truncated protein of 335 amino acids.
Patient H4 has no factor VIII activity and does not produce
antibodies against factor VIII; the level of VIII:Ag was not
determined.
The H 10 amplified DNA sample failed to hybridize to the
probe designed to detect mutations in the thrombin activa-
tion site at position 1689 (probe 12.4, Table 2, Fig 2).Sequence analysis of the H10 amplified sample, presented in
Fig 3, confirmed that the H10 mutation lies in arginine
codon 1689. A C to T transition has resulted in a missense
mutation, replacing an arginine with a cysteine residue. This
mutation also generates a PstI restriction site that can beused for carrier determination (see below). The substitution
of any amino acid for an arginine at this position might beexpected to prevent cleavage by thrombin or factor Xa and
preclude activation of factor VIII. Hematological investiga-
tion of this case demonstrates that, while no factor VIII
activity is detectable in patient HlO, his level of VIII:Ag
approaches a normal value (Fig 4). This unusual activity/
antigen profile is likely to be the consequence of the missense
mutation of the arginine codon at the cleavage site. The
results indicate that the protein is synthesized and secreted at
normal levels, but cannot be activated by thrombin.
The hemophilia in patient H10 is a sporadic occurrence in
a large pedigree (Fig 4), and we attempted to determine
whether the patient’s mother is a carrier. The ratio of factor
�d�ji
�
GATC GATC
CONTROL H4
Fig 3. Sequence of H4 and Hl 0 mutations. Amplified H4. Hl 0.
and control DNAs were sequenced using two different methods.
The 1 95-bp. amplified exon-8 fragments from H4 and controlDNAs were gel-purified and sequenced by the “direct” method of
Wong et ala using oligonucleotide 1 1 .2 to prime DNA synthesis.Comparison of the normal control sequence with the H4 sequence
indicates a base substitution of an A for a G. The sequence aspresented is “anti-sense” and reflects a C to T transition in the
coding strand CGA codon 336 of the activated protein C cleavagesite. Exon-l 4 regions of Hi 0 and control DNAs were amplified.digested with Pad and Ssd. and cloned into an Ml 3 vector beforesequencing. The Hi 0 mutation results from a C to T transition atthe CGC arginine codon 1 689. The missense mutation caused acysteine substitution at the thrombin cleavage site. The Hi 0mutation also generates a Psd site; thus the control and Hi 0sequences diverge after the Pstl site. the sequence in the Hi 0sample being that of the Mi 3 vector. Sequence of two individualH10 clones gave the same result.
Fig 4. Analysis of the HiO pedigree. The HiO pedigree (A)consists of nonhemophilic males (0) and females (0). Only the
patient HiO (lll5. U) has hemophilia. Values for factor VIII activity(VIll:C). factor VIII antigen (VIll:Ag) and von WiIIebrand�s factorantigen (vWF:Ag; also known as factor VIII related antigen) arelisted as a percent of normal values (B). In (C) the 207-bp regioncorresponding to exon-i 4 was amplified from AL7. Ili 0. and llI5
DNAs using primers i2.i and 12.2 and was digested with Psd.Since a Pstl site is present in the oligonucleotide primer 1 2.1 #{149}theamplified DNAs are trimmed to 202-bp by Psd digestion. AmplifiedDNA from the patient (IlI5) is further cleaved to i64-bp and 38-bp(not visible) fragments as predicted from the sequence (Fig 3).Amplified DNAs from a normal control cell line (A17) and from themother (Ill 0) are not reduced to the 1 64-bp fragment by Pstl
digestion. In lane III5 & IIiO. amplified DNA from the patient and hismother were mixed before digestion to insure that the mother’s
amplified sample does not inhibit the restriction enzyme. Lane M
contains Haelll-digested PhiX 1 74 DNA.
VIII activity to vWF:Ag is used to predict carrier status.28 Inthe mother this ratio is 79% (74 of 94), giving a probability of86% that she is a carrier of severe hemophilia.29 For counsel-
ing purposes, it is assumed that two-thirds of mothers ofsporadic cases are carriers of hemophilia, thus reducing herrisk to 57%. The ratio of factor VIII activity to antigen (74 of
127 or 58%) suggests that the mother is heterozygous for the
missense mutation at codon 1 689. Given these data, we were
surprised to discover that the mutation is not present in DNA
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1026 GITSCHIER ET AL
isolated for the mother’s peripheral blood. DNAs from the
patient, the mother, and a normal control cell line were
amplified with primers 12. 1 and I 2.2, and the amplified
DNA was then digested with PstI (Fig 4). The patient’s
sample is cut by PstI, reflecting the C to T missensemutation, but the control sample and the mother’s sample
are not cleaved. Thus from the DNA analysis alone, we
would conclude that mother is not a carrier, although she
may be at risk for having another hemophilic son due to
germline mosaicism.’7’�#{176}’3’ Another explanation of the hema-
tological data is that the missense mutation originated
during the mother’s embryogenesis and that she is a somatic
mosaic.32’33 The patient’s sister was not available for DNAanalysis, but her activity and antigen levels indicate that she
is not a carrier of hemophilia.
DISCUSSION
We screened DNA isolated from hemophilia A patients
for mutations in factor VIII cleavage sites using DNA
amplification and oligonucleotide hybridization. Two muta-
tions were detected and both were C to T transitions. In
patient H4 this transition results in a nonsense mutation in
codon 336, truncating the mature factor VIII protein from
2,332 amino acids to only 335 amino acids. Previously
reported nonsense mutations have been observed in the 73-kd
domain, and all are found in severe patients.’2’4 The muta-
tion in patient H4 generates an even smaller peptide and is
undoubtedly responsible for his severe hemophilia.
A more interesting finding is seen in patient H 10 who has
an arginine to cysteine substitution at amino acid 1689, a site
necessary for activation of factor VIII by thrombin. The
patient has no factor VIII activity by coagulation assay, with
or without the addition of thrombin. However, his normallevels of VIII:Ag indicate that secretion, processing, and
stability of factor VIII are likely to be normal. These results
are consistent with those of Pittman and Kaufman7 who have
demonstrated by in vitro mutagenesis that an arginine toisoleucine substitution at position 1689 has no effect on the
level of factor VIII produced, but precludes its activation by
thrombin. Gel filtration studies show that the nonfunctional
VIII:Ag from patient HIO co-elutes with vWF suggesting
that the complex is formed normally (data not shown). A
preliminary experiment using human anti-factor VIII anti-
bodies indicates that factor VIII in patient HlO is not fully
released from vWF on thrombin activation. This result is also
consistent with the conclusions of Pittman and Kaufman34
and Foster et a135 who have demonstrated by deletion muta-
genesis and monoclonal antibody inhibition, respectively,
that vWF binds to the acidic region of the light chain. More
extensive studies using monoclonal antibodies specific for 90-
and 80-kd fragments are in progress to monitor the response
to thrombin and the binding ofvWF in this patient.
There are a number of issues germane to screening DNA
for hemophilia-causing mutations. The first involves the
biochemical characteristics of a particular group of patients.Most severe hemophiliacs have no detectable VlII:Ag, as
measured by an immunoradiometric technique,36’37 and are
classified as cross-reacting material-negative (CRM�5).
Factor VIII gene deletions and nonsense mutations have
been observed to cause hemophilia in some of these patients.
Most moderate and mild hemophiliacs have equivalent levels
of VIII:C and VIII:Ag and are therefore classified as
CRM�C��U�. Mutations that cause inefficient transcription or
translation or partial instability might be the basis of the
hemophilia in the CRM�U� patients. Cross-reacting posi-
tive (CRM”#{176}’)patients are those in whom factor VIII activity
is reduced relative to antigen by at least 30%. CRMIa�
patients are rare; for example only approximately 5% of
severe hemophiliacs are CRM”�.22’374’ In this study of the 34
patients whose VIII:Ag is known, three are CRM’� (includ-
ing patient HlO). Patient HlO is very unusual in having no
detectable VHI:C with normal VIII:Ag since CRM� hemo-
philiacs with normal VIII:Ag generally have 3% to 10%
VIII:C. This last group, the CRM�, are of great interest
since their variant proteins could give clues to sites in the
factor VIII protein essential for coagulant activity.
A second issue in screening for mutations is what parts of
the factor VIII molecule to explore. Factor VIII mRNA isproduced at low level, and its large coding sequence of 7.5 kb
is divided among 26 exons spanning almost 200 kb of
genomic DNA. It is reasonable to examine regions of factor
VIII that have been implicated as important for protein
function, as we have done here. However by limiting the
focus, mutations in domains of unsuspected functional
importance might be overlooked.
A final consideration is selecting a method to identify
these mutations. Mutations in the factor VIII gene were
initially detected by Southern blots, but only gene rearrange-
ments and muations altering restriction enzyme sites could
be detected. The ability to amplify genomic DNA by thepolymerase chain reaction now enables point mutations to be
identified. Currently, there are four alternatives for finding
single-base mutations in amplified genomic DNA: RNAse
cleavage,42 denaturing gradient gel electrophoresis,42 dis-
criminant oligonucleotide hybridization,43 and direct
sequencing.26 RNAse cleavage and denaturing gradient gels
offer the advantage that a large region can be surveyed for
mutations, but the disadvantage that not all mutations will
be detected. In contrast, oligonucleotide hybridization and
direct sequencing offer the advantage that probably all
mutations can be discerned, but that only small regions can
be examined at a time.
The approach we have taken is to screen an unselected
population for mutations in four specific sequences using
discriminant oligonucleotide hybridization. Other strategies
will undoubtedly uncover other types of mutations in the
factor VIII gene. Delineation of mutations that are responsi-
ble for partial or complete inactivation of the factor VIII
protein should provide new insights into what portions of themolecule are required for its activity.
ACKNOWLEDGMENT
We thank Marc Shuman, Marion Koerper, and Susan Karp at the
University of California, San Francisco, Robert ianco, iohn Phil-lips, and Pamela Orlando at Vanderbilt University, Nashville, and
Eleanor Goldman at the Royal Free Hospital, London, for collectingand providing the patient samples. We are grateful to Marie Dohertyfor preparation of oligonucleotides and Kevin Shannon for helpful
comments on this manuscript.
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FACTOR VIII CLEAVAGE SITE MUTATIONS 1027
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2. Toole ii, Knopf JL, Wozney JM, Sultzman LA, Buecker JL,
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RM: Molecular cloning of a cDNA encoding human antihaemo-
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1988 72: 1022-1028
J Gitschier, S Kogan, B Levinson and EG Tuddenham Mutations of factor VIII cleavage sites in hemophilia A
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