Multiple chromosomal spontaneously t(6;7) immunocytoma ... · Proc. Natl. Acad. Sci. USA83 (1986)...

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Proc. Natl. Acad. Sci. USA Vol. 83, pp. 7376-7380, October 1986 Genetics Multiple chromosomal rearrangements in a spontaneously arising t(6;7) rat immunocytoma juxtapose c-myc and immunoglobulin heavy chain sequences (chromosome translocation/immunoglobulin switch region) WARREN S. PEAR*, SIGURDUR INGVARSSON*, DAVID STEFFENt, MAXIMILIAN MJNKEt, UTA FRANCKEt, HERVt BAZIN§, GEORGE KLEIN*, AND JANOS SUMEGI* *Department of Tumor Biology, Karolinska Institute, Box 60400, S-104 01, Stockholm, Sweden; tWorcester Foundation for Experimental Biology, Shrewsbury, MA 01545; tDepartment of Human Genetics, Yale University School of Medicine, New Haven, CT 06510; and §Experimental Immunology Unit, Faculty of Medicine, University of Louvain, Brussels, Belgium Contributed by George Klein, June 12, 1986 ABSTRACT Spontaneously arising immunocytomas in Lou/Wsl rats contain a consistent translocation between chro- mosomes 6 and 7. The c-myc gene has been localized to chromosome 7 and has been shown to be rearranged in the majority of the rat immunocytomas. We now report the cloning of the rearranged li-kilobase EcoRI c-myc fragment from the IgE-secreting IR75 tumor. Sequence analysis revealed that the cytogenetically visible t(6;7) translocation must have involved several events in this tumor. One event has led to the juxta- position of c-myc and the switch p region, in a head-to-head orientation. The breakpoint is approximately 850 base pairs upstream from the proximal c-myc promoter on chromosome 7. This area is distinct from the more common mouse plasmacytoma- and Burkitt lymphoma-associated transloca- tion breakpoints and also differs from the known murine retroviral insertion sites. A second rearrangement has led to the transposition of sequences upstream from the switch v1 region to the c-myc-distant end of the switch ,u region, tail-to-tail. This requires at least two events, including one inversion. In addition to showing that identical loci (c-myc, immunoglobulin) are juxtaposed via chromosomal translocations in three differ- ent tumors (Burkitt lymphoma, mouse plasmacytoma, and rat immunocytoma) in different species (human, mouse, and rat), the multiple rearrangements in IR75 and some other tumors emphasize the selective value of c-myc activation by an immu- noglobulin locus in the tumorigenic process. Activation of a cellular oncogene by chromosomal transloca- tion appears to play a pivotal role in the genesis of certain hematopoietic tumors (1, 2). This is most consistently seen in two B-cell tumors, Burkitt lymphoma (BL) and mouse plasmacytoma (MPC), where chromosomal translocation juxtaposes the c-myc oncogene and one of the three immu- noglobulin loci in 100% of typical BLs and in 95% of MPCs studied (3). Eighty-five percent of the BL- and 90% of the MPC-associated translocations juxtapose c-myc and the immunoglobulin heavy chain locus. In the rest of the BLs, c-myc is juxtaposed to either the K or X locus, while only K appears to be involved in MPC. In a review, Cory (2) has classified the c-myc/heavy chain translocation breakpoints. They can occur in the following three regions of the c-myc-carrying chromosome: (i) within the myc gene, (ii) immediately to the 5' side of the gene, and (iii) distant from the gene. The breakpoint is located within the first c-myc exon or intron in approximately 70% of the BALB/c MPCs and 50% of the BLs. In the remaining 30% of BALB/c MPCs, it is distributed almost equally between regions II and III. Region III predominates in BL. No tumors have been found where the translocations would interrupt the coding exons 2 and 3. The switch (S) regions were the recombination targets inside the heavy chain gene cluster in all BALB/c MPCs studied, with Sa as the preferred site in more than 80% (2). S/A is the favored BL heavy chain target, but it is only associated with one third of the typical BL breakpoints. Recombination sites were also found in or upstream from the heavy chain joining region. The target in the heavy chain locus is unknown in approximately 25% of the BLs. Our group has previously shown that spontaneous im- munocytomas in Lou/Wsl rats (RIC) (4) contain a reciprocal translocation between chromosomes 6 and 7 that resembles the MPC-associated typical translocation between chromo- somes 12 and 15 (5). We have also shown that the c-myc gene of the rat is located on chromosome 7 and is rearranged in the majority of these t(6;7) tumors (6). The purpose of the present study was to explore whether the rat immunocytoma-asso- ciated translocations also act by juxtaposing c-myc to an immunoglobulin locus. Our detailed analysis of a rearranged c-myc DNA fragment isolated from the IR75 RIC gives an affirmative answer, but it also shows that the translocation involved multiple rearrangements in this particular tumor. One event has juxtaposed the c-myc gene and the S, region in opposite transcriptional orientations. A second event has placed sequences upstreams of the S., region (5' SWIG 1) next to the c-myc-distant side of the S. region, tail-to-tail in opposite transcriptional orientation. Consequently, the 5'- SWIG 1 sequences are in the same transcriptional orientation as the c-myc gene. Neither heavy chain constant region coding sequences nor the heavy chain enhancer could be detected within at least 2.3 kilobases (kb) of the c-myc gene proximal promoter. MATERIALS AND METHODS Hybridization Probes. c-myc probes were as follows: (i) pMC41-3RC (7), 1.5-kb Cla I-EcoRI fragment containing the third exon of the human MYC gene; and (ii) RB-2 (8), 1. 1-kb Sac I-Sma I fragment containing the 5' portion of the first c-myc exon and approximately 580 base pairs (bp) of 5'- flanking sequences cloned from the mouse c-myc gene. Immunoglobulin probes were as follows: (i) L3B (9), 10.5-kb Sac I fragment containing the entire rat joining region; (ii) pR14 (9), 3.5-kb Sac 1-HindIII fragment containing the rat S.; and (iii) yl probes were as follows [all probes were Abbreviations: RIC, rat immunocytoma; BL, Burkitt lymphoma; MPC, mouse plasmacytoma; S, switch; kb, kilobase(s); bp, base pair(s); 5' SWIG 1, DNA sequences 5' proximal to Sy,. 7376 The publication costs of this article were defrayed in part by page charge payment. This article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. §1734 solely to indicate this fact.

Transcript of Multiple chromosomal spontaneously t(6;7) immunocytoma ... · Proc. Natl. Acad. Sci. USA83 (1986)...

Page 1: Multiple chromosomal spontaneously t(6;7) immunocytoma ... · Proc. Natl. Acad. Sci. USA83 (1986) 7377 derived from the mouse yl clone, IgH2 (10)]: (i) Sy1 probe, 2.2-kb EcoRI-SacI

Proc. Natl. Acad. Sci. USAVol. 83, pp. 7376-7380, October 1986Genetics

Multiple chromosomal rearrangements in a spontaneously arisingt(6;7) rat immunocytoma juxtapose c-myc and immunoglobulinheavy chain sequences

(chromosome translocation/immunoglobulin switch region)

WARREN S. PEAR*, SIGURDUR INGVARSSON*, DAVID STEFFENt, MAXIMILIAN MJNKEt, UTA FRANCKEt,HERVt BAZIN§, GEORGE KLEIN*, AND JANOS SUMEGI**Department of Tumor Biology, Karolinska Institute, Box 60400, S-104 01, Stockholm, Sweden; tWorcester Foundation for Experimental Biology,Shrewsbury, MA 01545; tDepartment of Human Genetics, Yale University School of Medicine, New Haven, CT 06510; and §ExperimentalImmunology Unit, Faculty of Medicine, University of Louvain, Brussels, Belgium

Contributed by George Klein, June 12, 1986

ABSTRACT Spontaneously arising immunocytomas inLou/Wsl rats contain a consistent translocation between chro-mosomes 6 and 7. The c-myc gene has been localized tochromosome 7 and has been shown to be rearranged in themajority ofthe rat immunocytomas. We now report the cloningof the rearranged li-kilobase EcoRI c-myc fragment from theIgE-secreting IR75 tumor. Sequence analysis revealed that thecytogenetically visible t(6;7) translocation must have involvedseveral events in this tumor. One event has led to the juxta-position of c-myc and the switch p region, in a head-to-headorientation. The breakpoint is approximately 850 base pairsupstream from the proximal c-myc promoter on chromosome7. This area is distinct from the more common mouseplasmacytoma- and Burkitt lymphoma-associated transloca-tion breakpoints and also differs from the known murineretroviral insertion sites. A second rearrangement has led to thetransposition of sequences upstream from the switch v1 regionto the c-myc-distant end of the switch ,u region, tail-to-tail. Thisrequires at least two events, including one inversion. Inaddition to showing that identical loci (c-myc, immunoglobulin)are juxtaposed via chromosomal translocations in three differ-ent tumors (Burkitt lymphoma, mouse plasmacytoma, and ratimmunocytoma) in different species (human, mouse, and rat),the multiple rearrangements in IR75 and some other tumorsemphasize the selective value of c-myc activation by an immu-noglobulin locus in the tumorigenic process.

Activation of a cellular oncogene by chromosomal transloca-tion appears to play a pivotal role in the genesis of certainhematopoietic tumors (1, 2). This is most consistently seen intwo B-cell tumors, Burkitt lymphoma (BL) and mouseplasmacytoma (MPC), where chromosomal translocationjuxtaposes the c-myc oncogene and one of the three immu-noglobulin loci in 100% of typical BLs and in 95% of MPCsstudied (3). Eighty-five percent of the BL- and 90% of theMPC-associated translocations juxtapose c-myc and theimmunoglobulin heavy chain locus. In the rest of the BLs,c-myc is juxtaposed to either the K or X locus, while only Kappears to be involved in MPC.

In a review, Cory (2) has classified the c-myc/heavy chaintranslocation breakpoints. They can occur in the followingthree regions of the c-myc-carrying chromosome: (i) withinthe myc gene, (ii) immediately to the 5' side of the gene, and(iii) distant from the gene. The breakpoint is located withinthe first c-myc exon or intron in approximately 70% of theBALB/c MPCs and 50% of the BLs. In the remaining 30% ofBALB/c MPCs, it is distributed almost equally between

regions II and III. Region III predominates in BL. No tumorshave been found where the translocations would interrupt thecoding exons 2 and 3.The switch (S) regions were the recombination targets

inside the heavy chain gene cluster in all BALB/c MPCsstudied, with Sa as the preferred site in more than 80% (2). S/Ais the favored BL heavy chain target, but it is only associatedwith one third of the typical BL breakpoints. Recombinationsites were also found in or upstream from the heavy chainjoining region. The target in the heavy chain locus is unknownin approximately 25% of the BLs.Our group has previously shown that spontaneous im-

munocytomas in Lou/Wsl rats (RIC) (4) contain a reciprocaltranslocation between chromosomes 6 and 7 that resemblesthe MPC-associated typical translocation between chromo-somes 12 and 15 (5). We have also shown that the c-myc geneof the rat is located on chromosome 7 and is rearranged in themajority ofthese t(6;7) tumors (6). The purpose ofthe presentstudy was to explore whether the rat immunocytoma-asso-ciated translocations also act by juxtaposing c-myc to animmunoglobulin locus. Our detailed analysis of a rearrangedc-myc DNA fragment isolated from the IR75 RIC gives anaffirmative answer, but it also shows that the translocationinvolved multiple rearrangements in this particular tumor.One event has juxtaposed the c-myc gene and the S, regionin opposite transcriptional orientations. A second event hasplaced sequences upstreams of the S., region (5' SWIG 1)next to the c-myc-distant side of the S. region, tail-to-tail inopposite transcriptional orientation. Consequently, the 5'-SWIG 1 sequences are in the same transcriptional orientationas the c-myc gene. Neither heavy chain constant regioncoding sequences nor the heavy chain enhancer could bedetected within at least 2.3 kilobases (kb) of the c-myc geneproximal promoter.

MATERIALS AND METHODSHybridization Probes. c-myc probes were as follows: (i)

pMC41-3RC (7), 1.5-kb Cla I-EcoRI fragment containing thethird exon of the human MYC gene; and (ii) RB-2 (8), 1.1-kbSac I-Sma I fragment containing the 5' portion of the firstc-myc exon and approximately 580 base pairs (bp) of 5'-flanking sequences cloned from the mouse c-myc gene.Immunoglobulin probes were as follows: (i) L3B (9), 10.5-kbSac I fragment containing the entire rat joining region; (ii)pR14 (9), 3.5-kb Sac 1-HindIII fragment containing the ratS.; and (iii) yl probes were as follows [all probes were

Abbreviations: RIC, rat immunocytoma; BL, Burkitt lymphoma;MPC, mouse plasmacytoma; S, switch; kb, kilobase(s); bp, basepair(s); 5' SWIG 1, DNA sequences 5' proximal to Sy,.

7376

The publication costs of this article were defrayed in part by page chargepayment. This article must therefore be hereby marked "advertisement"in accordance with 18 U.S.C. §1734 solely to indicate this fact.

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Proc. Natl. Acad. Sci. USA 83 (1986) 7377

derived from the mouse yl clone, IgH2 (10)]: (i) Sy1 probe,2.2-kb EcoRI-Sac I fragment containing the S-yj region andCy1 probe, 2.4-kb Sac I fragment containing coding domainsfor Cy1 and 5'- and 3'-flanking sequences.

Cloning. The IgE-secreting IR75 rat immunocytoma hasarisen spontaneously in the Lou/Wsl strain, and contains areciprocal t(6;7) translocation (5). An 11-kb EcoRI fragmentcontaining the rearranged c-myc gene of IR75 was cloned bystandard techniques (11). The Rgam9.8 and Rgam9.6 cloneswere obtained by similar procedures except that the EcoRI-digested fragments were obtained from Lou/Wsl kidneyDNA. The cloning of the 17-kb EcoRI c-myc clone Rmyclwill be described elsewhere (D.S., unpublished results).DNA Analysis. DNA was prepared and blotted onto nitro-

cellulose as described (6). Hybridizations, washings, andautoradiography were carried out as described (6). DNAsequences were determined using the method of Sanger et al.(12). Sequences were analyzed using the programs developedby Staden (13) and the University of Wisconsin GeneticsComputer Group (14).

RESULTS

Cloning and Structure of the Rearranged c-myc Gene in theIR75 RIC. When cleaved with EcoRI, 15 of 16 t(6;7) RICs (5)contained the 17-kb germ-line myc band (Fig. lA) plus anadditional c-myc-specific fragment (ref. 6 and W.S.P., unpub-lished data). In two tumors, IR75 and IR209, the rearrangedc-myc EcoRI fragments were 11 and 14 kb in size, respectively.Both ofthese tumors had high c-mycmRNA levels, comparableto the X24C and ABPC45 MPCs (data not shown). The 11-kbfragment from the IR75 was inserted into the EMBL4 vectorand mapped with restriction enzymes (Fig. 1B).Comparison of the maps of the rearranged and nonre-

arranged c-myc fragments showed that the Xba I site, located600 bp upstream from the BamHI site flanking the first exon,

was missing from the IR75 rearranged c-myc (Fig. 1 A and B).The likelihood that the translocation break occurred in thisregion was confirmed by the finding that the 300-bp BamHIfragment from IR75RMyc (IR75.300) hybridized to the600-bp Xba I-BamHI fragment (Rymc.6XB) from the full-length rat c-myc clone Rmycl; whereas, the adjacentBamHIfragments in IR75RMyc (200 bp, 120 bp, and 700 bp) showedno homology to the rat c-myc clone. Both IR75.300 andRmyc.6XB were subcloned into M13mpl8 and Ml3mpl9vectors and sequenced. There was perfect homology be-tween IR75.300 and Rmyc.6XB for the first 95 bp from theBamHI site (Fig. 2). Beyond this point, there was virtually nohomology. Thus, the break has occurred approximately 850bp upstream from the most proximal c-myc promoter, whichis located 143 bp upstream from the BamHI site that dividesthe 0.9- and 1.1-kb BamHI fragments (L. Nacar and D.S.,unpublished results).The DNA Fragments Juxtaposed to c-myc Originate from

Chromosome 6. To determine the identity of the -1.5-kbc-myc juxtaposed region in IR75, the 700-bp EcoRI-BamHIterminal fragment (IR75.700) was hybridized to a rat-mousesomatic cell hybrid panel (16). The pattern shown in Table 1was consistent with the localization of IR75.700 to ratchromosome 6, known to contain the heavy chain locus (17).Hybridization of IR75.700 to a mouse-Chinese hamsterhybrid panel (18, 19) showed that the murine homologue ofthis DNA fragment lies on chromosome 12, known to carrythe heavy chain locus (data not shown).To explore the likely possibility that the 1.5-kb c-myc

juxtaposed fragment originated from the heavy chain genecluster, we attempted to locate IR75.700 homologous se-quences within the well-characterized mouse heavy chainconstant region. A complete map of the region has beenpublished, including the restriction fragment lengthpolymorphisms between BALB/c and C57/BL (20).IR75.700 was found to be polymorphic between these mouse

t c-mycc

R~~t-fs~i t I TtT iT-iyt

5 F-_4 1kb_?~I c-my

- S ~ ~~~~TI \ I TIRN 5RMyc

. Cjf4 \6

c' r r '2

1kb

o EcoRI * BsmHI

c Mind II Xbal

5 Sr Cr 3

3gMp L

3t CO 5'.........................

SP

I- lOOhp

0

-ok

Ip il F

91111

FIG. 1. Restriction map of the rearranged IR75 c-myc-carrying fragment and its germ-line components. (A) Germ-line c-myc. The structureof the rat c-myc gene was deduced by hybridization to genomic DNA of Lou/Wsl and Fisher rats (refs. 6 and 15, and W.S.P., unpublishedobservations) and cloning of the 17-kb unrearranged EcoRI fragment from the Fisher strain (D.S., unpublished results). The c-myc restrictionmaps of Lou/Wsl and Fisher rats are identical (W.S.P. and D.S., unpublished observations). No differences have been found in overlappingregions that have been sequenced. The approximate location of the three c-myc exons is indicated by the bar above the map. (B) IR75RMyc,IR75 c-myc rearrangement. Homology to germ-line fragments is shown by connecting lines. The c-myc homologous region ofIR75RMyc extendsat least to the 3'-EcoRI site. Only the 900-bp fragment that contains the 5' part of exon 1 is shown. The transcriptional orientations of thetransposed fragments are shown by arrows. (C) RGAM9.8 and RGAM9.6, restriction fragments carrying homologous sequences to Sj, and C,probes are indicated. Only one Bgl ll site in RGAM9.6 is indicated. (D) Germ-line rat S,. and C,, regions (9).

A

I I ? B

Genetics: Pear et al.

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Proc. Natl. Acad. Sci. USA 83 (1986)

1iBAMHI

I R 75 GGATCCTCCGTCGAGTCTCTGCCAGTCTACACCCATGCACCTCACTCAGAGTTCCAGTTC

C-MYC GGATCCTCCGTCGAGTCTCTGCCAGTCTACACCCATGCACCTCACTCAGAGTTCCAGTTC

70

IR75

C-MYCSWMU

90 110

CACAGCCAGTTTCCACTAAAGGCAAATCTCTTTGCTGAGCTGAGCTGAGC AGCTGGI I IInInI I I I I I I II I I I I I I I I uI I I I I II I I I ...CACAGCCAGTTTCCACTAAAGGCAAATCTCTTTGCCCTG

GCTGGGGTGAGCTGAGCTGAGC AGCTGGGG

30 Be

130 150 17SfR75 4AGCTGAGCTGAGCTGGGTGAGCTGAGCTGGGTGAGTTGAGCTGAGCTGGGTAAGCTGA

+#+.....++3.........+........... *+++*++* ....*....*...++++SWUM AGCTGAGCTGAGCTGGGTGAGCTGAGCTGGGTGAGTTGAGCTGAGCTGGGTAAGCTGA

IR 75

SWMU

RGAM98

190 210 230FOKI

GCTGAGCTGGGTGAGCAGAGCTGGGGGTGAGCTGAGCTGGATGAGCTGGGCACCTGTCCT+ 4+44.... 4.4...+..... ++++*+++4+4++ *+4+4+*+ 4*......#....##

GCTGAGCTGGGTGAGCAGAGCTGGGGGTGAGCTGAGCTGGATGAGCTGGGCTGAACCTTCCACCTGTCCT

250 270 290BANHI

I R 75 GGCTTCCCTGGTGCTGCTCTGCCTGGATCCCTACCCTTCCACCTGTCCTGGCTCCCTGGA

RGAM98 GGCTTCCCTGGTGCTGCTCTGCCTGGATCCCTACCCTTCCACCTGTCCTGGCTCCCTGGA

310

IR75 TGCTCTGTCTGG

RGAM98 TGCTCTGTCTGG

strains. Comparison of the mouse heavy chain gene map withthe pattern obtained after hybridization of IR75.700 withEcoRI, Xba I, Sac I, Kpn I, or HindIII-digested BALB/c andC57/BL DNA showed that the hybridizing sequences werewithin the 6.2-kb Sac I-Kpn I fragment, located in theintervening region between the y3 and y4 loci (Fig. 3A). Thiswas confirmed by comigration of IR75.700 and C-1 probehybridizing sequences within HindIII-digests ofBALB/c andC57/BL DNA (Fig. 3B).

Cloning of the Germ-Line Fragment of IR75.700. IR75.700identified two X phage clones in an EcoRI-cleaved Lou/Wslkidney library. The two positive clones, 9.8 kb (Rgam9.8) and9.6 kb (Rgam9.6) (see Fig. 1C for restriction maps), corre-sponded to the IR75.700 germ-line fragments (W.S.P., un-published observations). The 4.6-kb BamHI fragment ofbothclones hybridized to a murine Cy1 probe and a murine Sylprobe. IR75.700 hybridized to the terminal 800-bpEcoRI-BamHI fragments of Rgam9.8 and Rgam9.6, and alsoto the 600- and 1300-bp BamHI fragments of Rgam9.8.Similarly to the location of the corresponding sequences inthe mouse, the origin of IR75.700 can thus be traced to a

FIG. 2. Sequencing results of the break-point-containing fragment IR75.300. The se-quence of IR75.300 (IR75) is shown on the topline. It begins at the BamHI site that abuts the900-bpBamHI fragment. It includes all 270 bp ofIR75.300 and 42 bp of the adjacent BamHIfragment IR75.200. The sequence ofRmyc.6XB(c-myc) begins at the BamHI site that abuts the900-bp BamHI fragment. Homology betweenIR75.300 and Rmyc.6XB is indicated by verticallines. Homology between IR75.300 and the S.fragment, pR14.420F (SWMU), is indicated by+. The Fok I site that denotes the 3' end of thisrestriction fragment is indicated. The homologybetween Rgam98.600 (RGAM98) and IR75.300begins 40 bp upstream from the BamHI site thatabuts the 200-bp BamHI fragment and the ho-mologous region is indicated by #. One of therepeats of the S., region that has perfect homol-ogy to the repeats found in the mouse S^, regionis boxed.

region in the rat heavy chain gene cluster approximately 2 kbupstream from the Syl region.To localize the breakpoint in Rgam9.8, the c-myc

breakpoint-containing fragment, IR75.300, was hybridized tothe rat yl clones. IR75.300 hybridized to the 600-bp and1300-bp BamHI fragments of Rgam9.8, but not to Rgam9.6.The 120-bp and 200-bp BamHI fragments of the IR75 clonewere also present in Rgam9.8, located between the 800-bpand 600-bp BamHI fragments. Since the 600-bp BamHIfragment was closest to the 120- and 200-bp BamHI fragmentsconserved in the translocation, the breakpoint site inRgam9.8 was most probably located in this fragment.DNA sequencing showed that there was perfect homology

between Rgam98.600 and IR75.300 for the first 40 bp,beginning at the BamHI site abutting the 200-bp BamHIfragment (Fig. 2). After this point, the homology was verylow. In addition, the sequenced regions of the 200-bp BamHIfragments of Rgam9.8 and IR75RMyc showed perfect ho-mology (Fig. 2). These results also showed that the transloca-tion has placed the 5'-SWIG 1 sequences and the c-myc genein the same transcriptional orientation (Fig. 1B).

Table 1. Correlation of IR75.700 with rat chromosomes in rat-mouse somatic cell hybridsRat chromosome number

Hybrid IR75.700 X 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20LB20 - + - + - - - (-) + - - - - + + - - + (+) + + +LB251 - + + + (-) + - (-) + - - + - + + - - - + - + -LB161 + + - + + + + + + - + + - (-) + + + + + + + (+)LB510 - + + + + + (-) - + - - - - + + + + + + + - (-)LB571 - + - + + + - - - (-) - - + - - + - + + + - -LB780 - + - + + + + - + - - + + - + - - - + + - (+)LB860 - + - + + + - - + - + - + + + + + + + (+)LB1040 + + - - + + (-) + + - - + + + - - + + - + - -

Discordant 6 4 7 4 5 2 0 5 2 2 2 4 5 6 3 2 4 7 5 3 4clones

+; Chromosome dosage factor, 0.6. (+); Chromosome dosage factor, 0.3-0.5. (-); Chromosome dosage factor, 0.1-0.2. -; Chromosomedosage factor, 0.

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Proc. Natl. Acad. Sci. USA 83 (1986) 7379

A -Jm

0Qa

TITTJ i}A4 IJT T T TTI I UIII II II 1

'-,2 kb

Ba b d

em

-23kb

FIG. 3. (A) Restriction map of mouse yl region (20). The 1.5-kbdeletion in C57/BL is indicated by brackets. The 6.2-kb Kpn I-SacI region that showed homology to IR75.700 is underlined. o, EcoRI;o, HindIII; v, Kpn I; *, Sst I. (B) Comigration of IR75.700 and Cylregions. HindIII-digested BALB/c liver DNA (lanes b and d) andC57/BL liver DNA (lanes a and c) were transferred to a nitrocellu-lose filter and hybridized to a C71 probe (lanes a and b) and IR75.700(lanes c and d). The C71 probe was the 2.6-kb Sac I fragment ofIgH2(10), known to contain the coding region and 5'- and 3'-flankingsequences.

On genomic blots of EcoRI-digested IR75 DNA, IR75.700hybridized to the 11-kb rearranged c-myc and to three otherfragments (data not shown). None of these fragments corre-sponded to the 9.8- and 9.6-kb germ-line fragments. Hybrid-ization to EcoRI/BamHI-digested IR75 DNA with IR75.700resulted in three bands at 0.7, 1.3, and 4.2 kb (data notshown). Of these fragments, only the 1.3-kb fragment corre-sponded to the germ-line fragment (W.S.P., unpublishedobservations). When EcoRI-digested DNA from seven otherRICs (IR33, IR49, IR72, IR88, IR209, IR221, and IR223) washybridized with IR75.700, only the two germ-line fragmentswere evident (data not shown). This suggests that the5'-SWIG 1 sequences are not directly involved in the c-myc-associated rearrangements in these seven RICs.

Multiple Rearrangements in the IR75 Result in the Head-to-Head Juxtaposition ofc-myc and SA.. Although IR75.300 hasconsiderable sequence identity with both c-myc and 5'-SWIG1 sequences, 135 bp were found between the c-myc and5'-SWIG 1 breakpoints that did not appear to originate fromeither of these loci (Fig. 2). This region contained an =9-foldrepeat unit with the consensus sequence TGAGCTGAGCT-GGG. This shares considerable homology with the publishedconsensus sequences of the mouse S. region (GAGCT)n(GG-GGT)n (21).To determine the origin of this switch-like region, IR75.300

was hybridized to pR14, the subclone of the rat SI region (9).Since the switch-like region in IR75.300 contained a Fok Isite, pR14 was digested with Fok I and hybridized withIR75.300. There was strong hybridization to a 420-bp frag-ment and weak hybridization to an 850-bp fragment. The420-bp Fok I fragment (pR14.420F) was filled in by T4polymerase, subcloned into the Sma I site of M13mpl8 andsequenced. There was perfect homology between the 135-bpswitch-like region in IR75.300 and pR14.420F (Fig. 2). Thisproved that the 135 bp originated from the S., region.

Because Fok I recognizes the sequence

5' GGATG(N)9 3'3' CCTAC (N) 135'

and cleaves either 9 or 13 nucleotides away from therecognition site (22), one Fok I recognition site should befound within any Fok I-digested fragment. The sequencingresults showed that the Fok I recognition sequence GTAGGis located exactly 13 bp away from the Sma I site in theM13mp18 vector, showing that this is the 3' end of thisfragment (Fig. 2). The 3' end of the S. subclone, pR14(denoted by the HindIII site in Fig. 1D), points towards theheavy chain constant region. Since the conserved Fok I sitein IR75.300 is located at the 5'-SWIG 1 junction, rather thanthe c-myc junction, the S,1 and c-myc regions must be facingeach other head-to-head (Fig. 1B). Conversely, the S., and5'-SWIG 1 regions are located tail-to-tail (Fig. 1B).

DISCUSSIONChromosomal Translocations Juxtapose c-myc and Heavy

Chain Sequences in Three B-Cell Tumors Occurring in ThreeDifferent Species. The documented juxtaposition of c-mycand heavy chain sequences in IR75 adds a third tumor and athird species to the already impressive evidence of closelyhomologous translocations in BL and MPC. These threetumors represent at least two different stages of B-cellmaturation, and their natural histories and modes of induc-tion are very different. Unlike BLs and MPCs, most RICs,including IR75, produce IgE (4).

Cytogenetic analysis of IR75 and 15 other RICs revealedthe presence of an identical t(6;7) translocation in all 16tumors (5). Southern blot hybridization showed that c-myc,known to be located on chromosome 7 (6), was rearranged in15 of 16 tumors (ref. 6 and W.S.P., unpublished results). Withthe localization of the rat heavy chain locus to chromosome6 (17) and with the analysis ofthe IR75 translocation reportedin this paper, it is likely that the RIC-associated t(6;7)translocation contributes to the tumorigenic process by asimilar c-myc/heavy chain juxtaposition as in MPC and BL.This is further supported by our findings that the rearrangedc-myc fragments comigrate with heavy chain-specific se-quences in several other RICs (W.S.P. and G. Wahlstrom,unpublished results).The Chromosome 7 Breakpoint Is Outside the c-myc Gene in

IR75. The chromosome 7 breakpoint in the IR75 is approx-imately 850 bp upstream from the c-myc proximal promoter.This is further upstream than the breakpoints in all analyzedMPCs with a typical (heavy chain/c-myc) translocation thathave a rearranged c-myc-containing EcoRI fragment and themajority of BLs in the corresponding category. It is alsoupstream from the c-myc-associated viral integration sites inAKR-derived T-cell lymphomas (2) and Moloney virus-induced rat thymomas (ref. 15 and D.S., unpublished data).As in the majority of BLs, the RIC-associated translocationsdo not appear to depend on the removal of postulated exon1-associated regulatory sequences (23-25).A Heavy Chain Switch Region Is Juxtaposed to the c-myc

Gene in a Head-to-Head Orientation in All Three TypicalTranslocation B-Cell Tumors. Similarly to all molecularlyanalyzed MPCs and BLs with typical (c-myc/heavy chain)translocations associated with rearranged c-myc EcoRI frag-ments, the IR75 translocation has led to the juxtaposition ofc-myc and a heavy chain switch region in a head-to-headorientation. This consistent topology may merely reflect thechromosomal orientation of the participating genes (26, 27).Alternatively, it is possible that the predominance of thehead-to-head juxtaposition has functional reasons. As withthe analyzed, exceptional MPC ABPC45 (28), our present

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Proc. Natl. Acad. Sci. USA 83 (1986)

findings on IR75 show that complex rearrangements may occurand can include inversions. It is, therefore, unlikely thatchromosomal geometry is the limiting factor as such, althoughit may serve as the basis for the most frequent configurations inthe uncomplicated reciprocal translocations.The IR75 t(6;7) Translocation Involves Multiple Rearrange-

ments. Unlike the majority of BL and MPC translocations,the IR75 must have arisen by several cytogenetic events.Only one of them, the reciprocal t(6;7) translocation, isvisible at the chromosomal level. Conceivably, and in anal-ogy with the majority of the MPC- and BL-associatedtranslocations, this event may have been responsible for thehead-to-head juxtaposition of c-myc and an S, region. Atleast one additional event is necessary to explain the juxta-position of the SL and 5'-SWIG 1 regions in oppositeorientations. One possibility is that inversion in the heavy-chain gene cluster may have occurred as an aberrant event inthe looping-out model of switch recombination proposed byHonjo and Kataoka (29). It is also possible, however, that aninversion occurred independently of switch recombination.

Unlike recombination in the T-cell receptor (30), inversiondoes not appear to be a normal mechanism of heavy chainswitch recombination. Greenberg et al. (31) have describedan inversion within the S, region ofMPC11, known to containa translocated c-myc gene. We have analyzed an exceptionalmouse plasmacytoma, ABPC45, where an inversion hasoccurred in the region juxtaposed to the rearranged c-mycfragment (28). This case is very similar to IR75, but withsome important differences. ABPC45 carries no cytogeneti-cally detectable translocation, but has an interstitial deletionin the c-myc region of chromosome 15, and carries a rear-ranged EcoRI c-myc fragment (32). Molecular analysis hasrevealed a complex rearrangement. The intact c-myc genewas juxtaposed head-to-head to the Sa, region. This was notfollowed by a Ca, region, as expected, but by another heavychain derived, inverted region, containing S, sequences andthe heavy chain enhancer, in that order, joined to Sastail-to-tail (28). This requires at least two translocations andone inversion. An important difference between ABPC45 andIR75 is the presence of the heavy chain enhancer in therearranged c-myc structure in the former. Although the heavychain enhancer is not present within 2.3 kb of the c-mycpromoters in the IR75, probing further upstream from thetransposed 5'-SWIG 1 sequences would be required to rule itspresence out.

It has been demonstrated that a variety of regions in theimmunoglobulin loci can exert B-cell-specific enhancer orpromoter activity (33-35). It is conceivable that the 5'-SWIG1, or sequences further upstream from it, may play a similaractivating role. Alternatively, the active state of the chro-matin, rather than specific enhancer sequences, may bear theresponsibility for the constitutive activation of the transposedc-myc sequences. If so, it is conceivable that activationrequires a certain "minimum length" of immunoglobulinlocus-associated chromatin in the neighborhood of c-myc.The most frequent representations of certain regions may bedue to topographical and/or enzymatic limitations, ratherthan to the requirement for a limited number of specificsequences.We are grateful for the help and advice given by Jack Spira, Gunilla

Wahlstrom, Bruno Starcich, Christer Hoog, Hans Mehlin, and UlfSkoglund. We thank J. Szpirer and G. Levan for the rat-mousehybrids; and R. Gallo, T. Honjo, K. Marcu, F. Mushinski, and P.Tsichlis for cloned DNAs. This work was supported by Grant3ROlCA14054 from the National Cancer Institute, Department ofHealth and Human Services, and by the Swedish Cancer Society.W.S.P., S.I., and J.S. are recipients of fellowships from the CancerResearch Institute and the Concern Foundation. D.S. was a recipientof a research grant from the American Cancer Society, Massachu-

setts Division, Inc. M.M. was supported by a fellowship from theDeutsch Forschungsgemeinschaft. H.B. was supported by a grantfrom the Fonds Cancerologique of the Caisse Gdndrale d'Epargne etde Retraite, Belgium. W.S.P. was also supported by a University ofRochester Honor's Fellowship.

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