Heather  Piwowar  @researchremix  Postdoc  with  NESCent  and  Dryad,  at  Duke  and  UBC

SFU  Research  Data  Repository  Project  Launch

 October  2012  

Momentum ofopen research data:

now in 5-D!

some photos NC, SA

http://www.metmuseum.org/toah/ho/09/euwf/ho_24.45.1.htm

http://www.flickr.com/photos/jsmjr/62443357/

http://www.flickr.com/photos/camilleharrington/3587294608/

http://www.flickr.com/photos/rkuhnau/3318245976/

http://www.flickr.com/photos/conformpdx/1796399674/

http://www.flickr.com/photos/rkuhnau/3317418699/

http://www.flickr.com/photos/zemlinki/261617721/

http://www.flickr.com/photos/tracenmatt/3020786491/

http://www.flickr.com/photos/the-o/2078239333/

http://www.flickr.com/photos/ryanr/142455033/

http://www.flickr.com/photos/75166820@N00/5318468/

MOMENTUM

5 dimensions

- repositories- research- policies- tools- environment

- repositories- research- policies- tools- environment

Discipline repositoryDatatype repositoryJournal repositoryInstitutional repository...

Institutional repository:https://circle.ubc.ca/

Discipline repository:http://datadryad.org/

Datatype repository:http://www.ncbi.nlm.nih.gov/genbank/(example: http://www.ncbi.nlm.nih.gov/nuccore/192496?report=genbank )

Journal supplementary information:http://www.nature.com/nature/journal/v429/n6990/suppinfo/nature02564.html

Lab website:http://www.bx.psu.edu/~ross/dataset/DatasetHome.html

"Data paper"http://www.biomedcentral.com/bmcresnotes/

Catch-all data repository:http://figshare.com/

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What’s best?It depends.We don’t know.

It depends.

http://www.flickr.com/photos/jo-h/2688026447/

- repositories- research- policies- tools- environment

Citation boost

Gleditsch et al. 2003. Posting Your Data: Will You Be Scooped or Will You Be Famous?, International Studies Perspectives 4(1): 89–97.

Piwowar et al. 2007. Sharing Detailed research data is associated with increased citation Rate. PLoS ONE.

Ioannidis et al. Repeatability of published microarray gene expression analyses. Nature Genetics 41, 149 - 155

Pienta et al. 2010. NSR Social Science Secondary Use. Michigan IR.

Henneken et al. 2011. Linking to Data – Effect on Citation Rates in Astronomy. ESO.

Sears 2011. Data Sharing Effect on Article Citation rate in Paleoceanography. AGU.

~70% in multivariate analysis

Amount shared and withheld

0.05

0.10

0.15

0.20

0.25

0.30

0.35

Year article published

Pro

po

rtio

n o

f a

rtic

les w

ith

da

tase

ts f

ou

nd

in

GE

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yE

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ress

2000 2001 2002 2003 2004 2005 2006 2007 2008 2009

Proportion of articles with shared datasets, by year

Across  time

19%

Piwowar and Chapman. Journal of Informetrics 2010

Odds Ratio

0.25 0.50 1.00 2.00 4.00

OA journal & previous GEO-AE sharing

0.95Amount of NIH funding

Journal impact factor and policy

Higher Ed in USA

Cancer & humans

Multivariate nonlinear regression with interactions

Amount of reuse

Type of reuse

Cost/benefit

Traditional research funding:$400k = 16 papers

At Dryad cost levels,at similar levels of reuse to GEO, $400k would facilitate 1000 reuse papers

A stellar Scientific ROI is in easy reach.

2) more impact per funding dollar

Piwowar, Vision, Whitlock (2011) Data archiving is a good investment. Nature 473, 285

http://researchremix.wordpress.com/2011/05/19/nature-letter/

- repositories- research- policies- tools- environment

Journal requirements

“An inherent principle of publication is that others should be able to replicate and build upon the authors' published claims. Therefore, a condition of publication in a Nature journal is that authors are required to make materials, data and associated protocols available in a publicly accessible database …”

http://www.nature.com/authors/editorial_policies/availability.html

http://www.nature.com/nature/journal/v453/n7197/index.html

journal  data  sharing  policy

JDAP<< Journal>> requires, as a condition for publication, that data supporting the results in the paper should be archived in an appropriate public archive, such as << list of approved archives here >>. Data are important products of the scientific enterprise, and they should be preserved and usable for decades in the future. Authors may elect to have the data publicly available at time of publication, or, if the technology of the archive allows, may opt to embargo access to the data for a period up to a year after publication. Exceptions may be granted at the discretion of the editor, especially for sensitive information such as human subject data or the location of endangered species.

High-impact journals

tend to have

a strong data-sharing

policy

Articles published in journals with a strong data-sharing policy are more likely to have publicly

available datasets

NSF data management requirement

NSF biosketch

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Do not publicize

http://www.nsf.gov/pubs/policydocs/pappguide/nsf08_1/gpg_2.jsp

NSF Biosketchstarting January:

Publications to Products

- repositories- research- policies- tools- environment

DataUp

DMP Tool

RunMyCode

http://www.flickr.com/photos/pixscapes/4331070047

In 2009, 116 articles cited ORNL DAAC data.

Finding these articles took 70-80 hours

across at least 12 resourcesall chosen from a deep understanding of this specific research domain

then the full text of all the hits were manually reviewed

Valerie Enriquez interview with James Kidderhttp://openwetware.org/wiki/DataONE:Notebook/Reuse_of_repository_data

http://www.flickr.com/photos/quinnanya/2055471833

altmetrics.org/tools

ImpactStoryaltmetric.comPLoS article-level metricsReader MeterScience Card

CC-BY-NC by maniacyak on flickrhttp://www.flickr.com/photos/maniacyak/3432589472

impact flavour

http://dx.doi.org/10.5061/dryad.18

http://www.icpsr.umich.edu/icpsrweb/ICPSR/studies/3131/utilization

http://www.icpsr.umich.edu/icpsrweb/ICPSR/studies/3131/utilization

http://www.icpsr.umich.edu/icpsrweb/ICPSR/studies/3131/utilization

ImpactStory.org

- repositories- research- policies- tools- environment

Open Access

Reproducibility

Big Data

- repositories- research- policies- tools- environment

GET EXCITEDand

MAKE THINGS

Open up your data while you are doing it :)

http://www.flickr.com/photos/myklroventine/892446624/

thank you!Todd Vision: PI of Dryad

Jason Priem: cofounder of ImpactStory

Also: Mike Whitlock, Jonathan Carlson, Estephanie Sta MariaThe open science online community and those who release their articles, datasets and photos openly.

blog: ResearchRemix.wordpress.com@researchremix