Bloom’s Cognitive and Affective Taxonomies Cognitive and Affective Taxonomies.
miss the forest: bringing together multiple taxonomies
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Transcript of miss the forest: bringing together multiple taxonomies
Miss the Forest For The Trees
Bringing Together Multiple Classifications
XIV TDWG - Firenze / 2013-11-01
Settingobject oriented Natural History Collection
Size / Ageview People
Background Taxonomy / Systematics
Relevancelocal - regional – national
continental - global
XIV TDWG - Firenze / 2013-11-01
Aimsstructure and analyze the Collection
taxonomically
Reason general Collection vs. separate Collectionsdigitized type material of certain groups
Grasses – Myrtaceae
Relevanceinternal – administratively - outreach
XIV TDWG - Firenze / 2013-11-01
objects
curation
Laurus L. / Lauraceae Juss. Illicium L. / Illiciaceae (DC.) A. C. Sm.
Magnolia L. / Magnoliaceae Juss. Annona L. / Annonaceae Juss.
workflow diagram
XIV TDWG - Firenze / 2013-11-01
XIV TDWG - Firenze / 2013-11-01
classifications are stored in a relational database
elements
names - atomized name stringsconnected to external sources ( IPNI/Tropicos/...)
references - published literature (persons) / working listslinked to digital content via DOIs (publishers) or PURLs (BHL)
accepted taxa - incl. homo- and heterotypic synonyms and (inferred) basionym references
only accepted taxa used for linking up children with parents
Service based architecture
Served through REST service Interfaces with responses in JSON(P) format.
The Services are part of the JACQ database System, which is available as an OpenSource package on sourceforge.net http://sourceforge.net/projects/jacq/
Visualisation is provided using a jsTree (which is a jQuery based tree browser). The jsTree is directly connected to the service endpoints. This yields a layered software architecture, which is independent of the underlying database system.
XIV TDWG - Firenze / 2013-11-01
sources included 20131101
nationalExk. Flora of Austria (1994 / 2005 / 2008 ) – finished
regionalFlora Iranica (1963--) – only accepted taxa ( regional )
globalDalla Torre & Harms (1900-1908) – work in progressCronquist 1981 – completed
APG + recent update in Phytotaxa 2011 – completed (global )Lycophytes & Ferns & Gymnosperms - Phytotaxa 2011 – completedSoreng et al 20120808 – Grasses – completedFunk et al. 2009 – Compositae - completedAnnonaceae – showcase – familiy finished – lower taxa work in progressAmaranthaceae, Chenopodiaceae, Portulacaceae (et al.) – work in progressEbenaceae, Myristicaceae – work in progress
classifications (incl. multiple taxonomies)
XIV TDWG - Firenze / 2013-11-01
XIV TDWG - Firenze / 2013-11-01
XIV TDWG - Firenze / 2013-11-01
XIV TDWG - Firenze / 2013-11-01
classification bowser @ JACQ
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Future
Future enhancements to the classification browser will include a pre-rendering of classifications. This means that the strictly relational scheme will be pre-calculated into a faster structure, which yields a intentional information loss in order to provide citable (and therefore revision save) references to classifications through state of the art web Interfaces.
NETWORKS
• Global Plants Initiative – JSTOR
• GBIF !
• EUROPEANA – Cultural heritage of Europe
• BHL
• INSPIRE / GEOSS
XIV TDWG - Firenze / 2013-11-01
needs
for Curation and Handling
• Names / Taxa (?)labels / concepts
• Classifications for sorting (?)
• physical / virtual„remove“ information from sourceScratchpads / Edit PlatformCybertaxonomy
XIV TDWG - Firenze / 2013-11-01
open questions
• servicespersistent availability of external services
caching vs. incorporating of „used“ data(g)UIDs
• datacomplementing data stores / repositories
forking / propagation of contentGUIDs
XIV TDWG - Firenze / 2013-11-01
Paul Maas (U - WAG), Wilfried Morawetz
Lars Chatrou (WAG), Elke Döring, Bernhard von Hagen, Martin Röser (HAL), Charlie Charvis
(BM), Armando Urquiola (HPPR), Nelson Zamora (INB), Antonio Webber (UniAmaz), George
Schatz (MO), Bobbi Angell, Jacky Kallunki, Mike Nee (NY), David Johnson (OWU), Álvaro
Pérez (QCA), Adriana Lobão (RB), Renato Mello-Silva (SPB), Tom Wendt (TEX), Gerhard
Gottsberger (ULM), Magda Chanco (USM), Otto Huber (VEN)
Michael Malicky (LI), Fritz Ehrendorfer, Andrea Frosch-Radivo, Michael Hesse, Hanna
Schneeweiß, Tod Stuessy, Walter Till (WU), Anton Igersheim, Ernst Vitek, Bruno
Wallnöfer, Wolfgang Koller (W)
CURATORSA, ALCB, AAU, AMAZ, B, BAB, BH, BIGU, BM, BOLV, BP, BR, BSC, C, CAY, CEN, CHAPA, COAH, COL, C
R, CUVC, CUZ, CVRD, E, EAP, ECON, EHH, ENCB, F, FDG, FHO, FI, FT, G, GB, GH, GJO, GOET, GUA,
GUAT, GUAY, HAC, HAJB, HAL, HB, HPPR, HRB, HUA, HUEFS, IAN, IBGE, ICA, IJ, INB, INPA, IPA, JAU
M, JE, K, L, LAGU, LE, LI, LINN, LL, LOJA, LPB, LZ, M, MA, MBM, MEDEL, MEXU, MG, MICH, MO, MY, N
A, NY, OXF, P, PH, PI, PMA, PORT, PR, PRC, QCA, QCNE, R, RB, S, SCZ, SEL, SP, SPB, SPF, STRI, TE
FH, TEX, TFAV, TO, U, UB, UCWI, ULM, UPS, US, USM, USZ, UVAL, VEN, W, WAG, WIS, WRSL, WU, X
AL, Z, ZT
Financing / Support Austrian Academy of Sciences, Natural History Museum Vienna, University of Vienna,
EU, GBIF, GBIF-ATXIV TDWG - Firenze / 2013-11-01
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