Microbial Classification. The Prokaryotes: Domains Bacteria and Archaea One circular chromosome, not...

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Microbial Microbial Classification Classification

Transcript of Microbial Classification. The Prokaryotes: Domains Bacteria and Archaea One circular chromosome, not...

Page 1: Microbial Classification. The Prokaryotes: Domains Bacteria and Archaea One circular chromosome, not in a membrane One circular chromosome, not in a membrane.

Microbial Microbial ClassificationClassification

Page 2: Microbial Classification. The Prokaryotes: Domains Bacteria and Archaea One circular chromosome, not in a membrane One circular chromosome, not in a membrane.

The Prokaryotes: The Prokaryotes: Domains Bacteria and ArchaeaDomains Bacteria and Archaea

One circular chromosome, not in One circular chromosome, not in a membranea membrane

No histonesNo histones No organellesNo organelles Peptidoglycan cell wallsPeptidoglycan cell walls Binary fissionBinary fission

Page 3: Microbial Classification. The Prokaryotes: Domains Bacteria and Archaea One circular chromosome, not in a membrane One circular chromosome, not in a membrane.

ProteobacteriaProteobacteria Mythical Mythical

Greek god, Greek god, Proteus, who Proteus, who could assume could assume many shapesmany shapes

Gram-Gram-negativenegative

Domain BacteriaDomain Bacteria

Page 4: Microbial Classification. The Prokaryotes: Domains Bacteria and Archaea One circular chromosome, not in a membrane One circular chromosome, not in a membrane.

Human pathogens:Human pathogens: BartonellaBartonella B. henselaB. hensela Cat-scratch diseaseCat-scratch disease BrucellaBrucella BrucellosisBrucellosis

The The (alpha) (alpha) ProteobacteriaProteobacteria

Page 5: Microbial Classification. The Prokaryotes: Domains Bacteria and Archaea One circular chromosome, not in a membrane One circular chromosome, not in a membrane.

Obligate intracellular parasites:Obligate intracellular parasites: EhrlichiaEhrlichia. Tick-borne, ehrlichiosis. Tick-borne, ehrlichiosis RickettsiaRickettsia. Arthropod-borne, spotted . Arthropod-borne, spotted

feversfevers R. prowazekiiR. prowazekii Epidemic typhusEpidemic typhus R. typhiR. typhi Endemic murine typhusEndemic murine typhus R. rickettsiiR. rickettsii Rocky Mountain Spotted FeverRocky Mountain Spotted Fever

The The (alpha) (alpha) ProteobacteriaProteobacteria

Page 6: Microbial Classification. The Prokaryotes: Domains Bacteria and Archaea One circular chromosome, not in a membrane One circular chromosome, not in a membrane.

The The (alpha) (alpha) ProteobacteriaProteobacteria

Figure 11.1

Page 7: Microbial Classification. The Prokaryotes: Domains Bacteria and Archaea One circular chromosome, not in a membrane One circular chromosome, not in a membrane.

WolbachiaWolbachia. . Live in Live in insects and insects and other other animals animals

The The (alpha) (alpha) ProteobacteriaProteobacteria

Page 8: Microbial Classification. The Prokaryotes: Domains Bacteria and Archaea One circular chromosome, not in a membrane One circular chromosome, not in a membrane.

Have prosthecae:Have prosthecae: CaulobacterCaulobacter. Stalked . Stalked

bacteria found in bacteria found in lakeslakes

HyphomicrobiumHyphomicrobium. . Budding bacteria Budding bacteria found in lakesfound in lakes

The The (alpha) (alpha) ProteobacteriaProteobacteria

Figure 11.2 & 3

Page 9: Microbial Classification. The Prokaryotes: Domains Bacteria and Archaea One circular chromosome, not in a membrane One circular chromosome, not in a membrane.

Nitrogen-fixing Nitrogen-fixing bacteria:bacteria: AzospirillumAzospirillum

Grow in soil, Grow in soil, using nutrients using nutrients excreted by excreted by plantsplants

Fix nitrogenFix nitrogen RhizobiumRhizobium

Fix nitrogen in Fix nitrogen in the roots of the roots of plantsplants

The The (alpha) (alpha) ProteobacteriaProteobacteria

Figure 27.5

Page 10: Microbial Classification. The Prokaryotes: Domains Bacteria and Archaea One circular chromosome, not in a membrane One circular chromosome, not in a membrane.

Produce acetic acid from ethyl Produce acetic acid from ethyl alcohol:alcohol: AcetobacterAcetobacter GluconobacterGluconobacter

The The (alpha) (alpha) ProteobacteriaProteobacteria

Page 11: Microbial Classification. The Prokaryotes: Domains Bacteria and Archaea One circular chromosome, not in a membrane One circular chromosome, not in a membrane.

The The (beta) (beta) ProteobacteriaProteobacteria

Page 12: Microbial Classification. The Prokaryotes: Domains Bacteria and Archaea One circular chromosome, not in a membrane One circular chromosome, not in a membrane.

ThiobacillusThiobacillus Chemoautotrophic, oxidize sulfur: HChemoautotrophic, oxidize sulfur: H22S S

SOSO442–2–

SphaerotilusSphaerotilus Chemoheterotophic, form sheathsChemoheterotophic, form sheaths

The The (beta) (beta) ProteobacteriaProteobacteria

Figure 11.5

Page 13: Microbial Classification. The Prokaryotes: Domains Bacteria and Archaea One circular chromosome, not in a membrane One circular chromosome, not in a membrane.

NeisseriaNeisseria ChemoheterotrophicChemoheterotrophic

, cocci, cocci N. meningitidisN. meningitidis N. gonorrhoeaeN. gonorrhoeae

SpirillumSpirillum ChemoheterotrophicChemoheterotrophic

, helical, helical

The The (beta) (beta) ProteobacteriaProteobacteria

Figure 11.4 & 6

Page 14: Microbial Classification. The Prokaryotes: Domains Bacteria and Archaea One circular chromosome, not in a membrane One circular chromosome, not in a membrane.

BordetellaBordetella Chemoheterotrophic, rodsChemoheterotrophic, rods B. pertussisB. pertussis

BurkholderiaBurkholderia. Nosocomial infections. Nosocomial infections ZoogloeaZoogloea. Slimy masses in aerobic . Slimy masses in aerobic

sewage-treatment processessewage-treatment processes

The The (beta) (beta) ProteobacteriaProteobacteria

Page 15: Microbial Classification. The Prokaryotes: Domains Bacteria and Archaea One circular chromosome, not in a membrane One circular chromosome, not in a membrane.

The The (gamma) (gamma) ProteobacteriaProteobacteria

Page 16: Microbial Classification. The Prokaryotes: Domains Bacteria and Archaea One circular chromosome, not in a membrane One circular chromosome, not in a membrane.

Pseudomonadales:Pseudomonadales: PseudomonasPseudomonas

Opportunistic Opportunistic pathogenspathogens

Metabolically Metabolically diversediverse

Polar flagellaPolar flagella AzotobacterAzotobacter and and

AzomonasAzomonas..

Nitrogen fixingNitrogen fixing MoraxellaMoraxella..

ConjunctivitisConjunctivitis

The The (gamma) (gamma) ProteobacteriaProteobacteria

Figure 11.7

Page 17: Microbial Classification. The Prokaryotes: Domains Bacteria and Archaea One circular chromosome, not in a membrane One circular chromosome, not in a membrane.

Legionellales:Legionellales: LegionellaLegionella

Found in Found in streams, warm-streams, warm-water pipes, water pipes, cooling towerscooling towers

L. pneumophiliaL. pneumophilia CoxiellaCoxiella

Q fever Q fever transmitted via transmitted via aerosols or milkaerosols or milk

The The (gamma) (gamma) ProteobacteriaProteobacteria

Figure 24.15b

Page 18: Microbial Classification. The Prokaryotes: Domains Bacteria and Archaea One circular chromosome, not in a membrane One circular chromosome, not in a membrane.

Vibrionales:Vibrionales: Found in coastal Found in coastal

waterwater Vibrio choleraeVibrio cholerae

causes choleracauses cholera V. parahaemolyticusV. parahaemolyticus

causes causes gastroenteritisgastroenteritis

The The (gamma) (gamma) ProteobacteriaProteobacteria

Figure 11.8

Page 19: Microbial Classification. The Prokaryotes: Domains Bacteria and Archaea One circular chromosome, not in a membrane One circular chromosome, not in a membrane.

The The (gamma) Proteobacteria (gamma) Proteobacteria Enterobacteriales (enterics):Enterobacteriales (enterics):

Peritrichous flagella, facultatively anaerobicPeritrichous flagella, facultatively anaerobic EnterobacterEnterobacter ErwiniaErwinia EscherichiaEscherichia KlebsiellaKlebsiella ProteusProteus SalmonellaSalmonella SerratiaSerratia ShigellaShigella YersiniaYersinia

The The (gamma) (gamma) ProteobacteriaProteobacteria

Page 20: Microbial Classification. The Prokaryotes: Domains Bacteria and Archaea One circular chromosome, not in a membrane One circular chromosome, not in a membrane.

The The (delta) (delta) ProteobacteriaProteobacteria

Page 21: Microbial Classification. The Prokaryotes: Domains Bacteria and Archaea One circular chromosome, not in a membrane One circular chromosome, not in a membrane.

BdellovibrioBdellovibrio. Prey on other bacteria. Prey on other bacteria DesulfovibrionalesDesulfovibrionales. Use S instead of O. Use S instead of O22

as final electron acceptoras final electron acceptor MyxococcalesMyxococcales. Gliding. Cells aggregate . Gliding. Cells aggregate

to form myxosporesto form myxospores

The The (delta) (delta) ProteobacteriaProteobacteria

Page 22: Microbial Classification. The Prokaryotes: Domains Bacteria and Archaea One circular chromosome, not in a membrane One circular chromosome, not in a membrane.

The The (delta) (delta) ProteobacteriaProteobacteria

Figure 11.10a

Page 23: Microbial Classification. The Prokaryotes: Domains Bacteria and Archaea One circular chromosome, not in a membrane One circular chromosome, not in a membrane.

The The (delta) (delta) ProteobacteriaProteobacteria

Figure 11.1b

Page 24: Microbial Classification. The Prokaryotes: Domains Bacteria and Archaea One circular chromosome, not in a membrane One circular chromosome, not in a membrane.

The The (epsilon) (epsilon) ProteobacteriaProteobacteria

Page 25: Microbial Classification. The Prokaryotes: Domains Bacteria and Archaea One circular chromosome, not in a membrane One circular chromosome, not in a membrane.

CampylobacterCampylobacter One polar One polar

flagellumflagellum GastroenteritisGastroenteritis

The The (epsilon) (epsilon) ProteobacteriaProteobacteria

Figure 11.1a

Page 26: Microbial Classification. The Prokaryotes: Domains Bacteria and Archaea One circular chromosome, not in a membrane One circular chromosome, not in a membrane.

HelicobacteHelicobacterr Multiple flagella Multiple flagella Peptic ulcersPeptic ulcers Stomach cancerStomach cancer

The The (epsilon) (epsilon) ProteobacteriaProteobacteria

Figure 11.1b

Page 27: Microbial Classification. The Prokaryotes: Domains Bacteria and Archaea One circular chromosome, not in a membrane One circular chromosome, not in a membrane.

The Nonproteobacteria The Nonproteobacteria Gram-Negative BacteriaGram-Negative Bacteria

Page 28: Microbial Classification. The Prokaryotes: Domains Bacteria and Archaea One circular chromosome, not in a membrane One circular chromosome, not in a membrane.

CyanobacteriaCyanobacteria Oxygenic Oxygenic

photosynthesisphotosynthesis Gliding motilityGliding motility Fix nitrogenFix nitrogen

Page 29: Microbial Classification. The Prokaryotes: Domains Bacteria and Archaea One circular chromosome, not in a membrane One circular chromosome, not in a membrane.

Anoxygenic photosynthesisAnoxygenic photosynthesis Purple and green sulfur bacteriaPurple and green sulfur bacteria

Purple and Green Purple and Green Photosynthetic BacteriaPhotosynthetic Bacteria

2H2O + CO2

light(CH2O) + H2O + O2

2H2S + CO2

light(CH2O) + H2O + 2S0

Page 30: Microbial Classification. The Prokaryotes: Domains Bacteria and Archaea One circular chromosome, not in a membrane One circular chromosome, not in a membrane.

C. trachomatisC. trachomatis TrachomaTrachoma STD, urethritisSTD, urethritis

C. pneumoniaeC. pneumoniae C. psittaciC. psittaci

Causes psittacosisCauses psittacosis

ChlamydiaeChlamydiae

Page 31: Microbial Classification. The Prokaryotes: Domains Bacteria and Archaea One circular chromosome, not in a membrane One circular chromosome, not in a membrane.

In In Bergey's ManualBergey's Manual, , Volume 5Volume 5

Figure 11.22a

Page 32: Microbial Classification. The Prokaryotes: Domains Bacteria and Archaea One circular chromosome, not in a membrane One circular chromosome, not in a membrane.

In In Bergey's ManualBergey's Manual, , Volume 5Volume 5

Figure 11.22b