Lecture 5 - Acid Base Concepts

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    The Ionization of Water

    and Acid-BaseChemistry

    Lemon tree in blossom, Jose Escofet 1989

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    Water ionizes to positively and negatively charged ions

    • electron-rich molecules are called nucleophiles and they react with electron-poor

    molecules called electrophiles

    • the oxygen atom in a water molecule is a nucleophile because of its two pairs

    of un-bonded (un-shared) electrons.

    • the lone-pair electrons of the oxygen of one H2O molecule can attack the

    hydrogen atom of another H2O molecule. This results in the breaking ofexisting bonds and forming of new bonds in the reacting molecules.

    the movement of a pair of

    electrons (arrow) results in

    new O-H bond forming the

    Hydronium molecule (thenew H atom comes from

    the second H2O molecule).

    the original electron pair in

    the second H2O molecule

    remains associated with theresulting hydroxide ion.

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    H2O 

    [H2O] 

    Keq

    OH-H+  +

    [OH-] 

    [H+

    ]=

    [H2O] Keq [OH-] 

    [H+

    ]=

    Kw [OH-] [H+]=

    [OH-] [H+] === =1/2

    (Kw) (1 x 10-14)

    1/21 x 10-7 M

    the dissociation of water can be simplified to:

    and may be written as:

    the Kw for pure H2O at 25oC and 1 atm pressure is 1 x 10-14

    Since the concentrations of H+ and OH- are equal:

    where Keq is the equilibrium constant for the reaction.The concentration of water is essentially unchanged.

    Therefore the constants can be combined and

    re-written as:

    Keq [H2O] is referred to as Kw so:

    Any solution that contains equal concentrations of H+ and OH- (like pure water) is said

    to be neutral.

    Solutions with [H+] > [OH-]  are acidic.

    Solutions with [H+] < [OH-]  are basic.

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    since for any solution:

    [OH-] [H+] = 1 x 10-14 M2 we can calculate the concentration of one ion

    if the concentration of the other is known.

    if a solution has a [H+] of 1 x 10-3 M then:

    [OH-] [H+] = 1 x 10-14 M2

    [OH-] (1 x 10-3 M) = 1 x 10-14 M2

    [OH-]  = 1 x 10-11 M 

    [OH-]  = 1 x 10

    -14 M2

    (1 x 10-3 M)

    note that the [H+] (1 x 10-3 M) is much higher than the [OH-] (1 x 10-11).

    A hundred million times higher to be exact!

    Because these number range so widely, we convert them to a logarithmic scale, called pH

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    Strong Acids and Bases completely dissociate in water

    HCl Cl-

    H+  +

    NaOH OH-Na+  +

    This means that in an aqueous solution of 0.1 M HCl:

    H+

     == =[Cl-] [H+] 0.1 M 1 x 10-1 M

    The strong acid hydrochloric acid and the strong base sodium hydroxide completely

    dissociate in water

    and the [OH-] will be 1 x 10-13 M

    What is the pH of this solution? The pH is the negative log of the hydrogen ion concentration.

    pH = -log10[H+]

    pH = -log (1 x 10-1M)

    pH = -(-1) = 1

    Conversely, one can calculate the [H+] from the pH:

    pH = -log[H+]

    [H+] = antilog (-pH)

    [H+] = antilog (-1)

    [H+] = 1 x 10-1 M

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    The pH scale

    pH, which is defined as the negative logarithm of the

    Hydrogen ion concentration, is a convenient scale

    turning small and awkward numbers intowhole numbers

    Moran p43

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    Practice Questions (Solutions will be posted on D2L).

    1. What is the concentration of OH- in an aqueous solution if the H+ concentration

    is 1 x 10-8M? Is this solution acidic or basic?

    2. What is the [H+] in an aqueous solution of 0.2 M HCl. What is the pH?

    3. You add 10 ml of 0.1 M HCl to 990 ml water. What are the [H+] and [OH-]

    in this solution? What is the pH of the solution?

    Note, for examinations, it is your responsibility to:

    -bring a calculator

    -ensure it is a functional calculator

    -know how to use the calculator

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    Weak Acids and Bases partially dissociate in water

    Organic acids (which are the kind that are most important to biological systems) do not

    completely dissociate like HCl.

    HA  A-H+  +

    weak acid conjugate base of HA

    The dissociation of a weak acid can be represented by the following equation:

    For example, acetic acid (CH3COOH) dissociates to the conjugate base CH3COO- and H+

    H+  +

    weak acid, acetic acid

    (CH3COOH)

    conjugate base, acetate ion

    (CH3COO- )

    http://www.google.ca/url?sa=i&rct=j&q=&esrc=s&frm=1&source=images&cd=&cad=rja&docid=CQCwfRANC3yjDM&tbnid=uF3MF2H8GskOfM:&ved=0CAUQjRw&url=http://www.chemistryinnovation.co.uk/stroadmap/roadmap.asp-id=459.htm&ei=zo4xUqyTIJOu2gWPxYGQCw&bvm=bv.52109249,d.b2I&psig=AFQjCNGyh34x3qGfhPlTH8--VC0uTVuvug&ust=1379065896755734http://www.google.ca/url?sa=i&rct=j&q=&esrc=s&frm=1&source=images&cd=&cad=rja&docid=CQCwfRANC3yjDM&tbnid=uF3MF2H8GskOfM:&ved=0CAUQjRw&url=http://www.chemistryinnovation.co.uk/stroadmap/roadmap.asp-id=459.htm&ei=zo4xUqyTIJOu2gWPxYGQCw&bvm=bv.52109249,d.b2I&psig=AFQjCNGyh34x3qGfhPlTH8--VC0uTVuvug&ust=1379065896755734http://www.google.ca/url?sa=i&rct=j&q=&esrc=s&frm=1&source=images&cd=&cad=rja&docid=CQCwfRANC3yjDM&tbnid=uF3MF2H8GskOfM:&ved=0CAUQjRw&url=http://www.chemistryinnovation.co.uk/stroadmap/roadmap.asp-id=459.htm&ei=zo4xUqyTIJOu2gWPxYGQCw&bvm=bv.52109249,d.b2I&psig=AFQjCNGyh34x3qGfhPlTH8--VC0uTVuvug&ust=1379065896755734

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    [HA] K

    a

    [A-] [H+]

    =

    where Ka is the acid dissociation constant. The larger

    the Ka, the stronger the acid.

    The strength of a weak acid (its ability to release H+ ions) can be determined using

    following expression:

    for acetic acid, where Ka = 1.76 x 10-5 M we can calculate the [H+] in a 0.1 M solution

    of acetic acid and also its pH:

    [CH3COOH] Ka

    [CH3OO-] [H+]=1.76 x 10-5 =

    [CH3COOH] 

    [CH3OO-] [H+]

    1.76 x 10-5 = 0.1 M 

    x2

    =

    simplifying assumption:

    concentration of acid remainsnearly constant.

    x = 1.33 x 10-3 M = [H+] 

    pH = -log (1.33 x 10-3M) = 2.88

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    Because Ka values vary over a wide range, they are expressed using a log scale:

    pKa = -log10KaThe lower the pKa the stronger the acid.

    McKee p87

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    Practice Questions (Solutions will be posted on D2L).

    4. What is the pH of a 0.2 M acetic acid solution where the Ka for acetic acid

    is 1.33 x 10-5 M.

    5. What is the pH of a 0.1 M formic acid solution where the pKa for formic acid is 3.77.

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    Buffers

    • Buffers are solutions that resist changes in pH

    • Regulating pH is a universal and essential activity in living organisms

    • Human blood has a pH of 7.4 and can vary only between pH 7.35 and 7.45.

    pH below 7.35 results in acidosis, eventual CNS depression, coma, death.

    pH above 7.45 (alkalosis) results in muscle spasms, convulsions.

    • There are 3 main buffering system in the body and in cells

    Bicarbonate buffer

    Phosphate buffer

    Protein buffer (see later).

    • Buffers are also often used in the lab and are made by mixing appropriate

    concentrations of a weak acid with its conjugate base.

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    A Solution that resists changes in pH is said to be buffered

    A buffered solution can resist pH changes because an equilibrium exists between the

    weak acid and its conjugate base.

    Consider a buffer composed of the weak acid acetic acid (CH3COOH)

    and its conjugate base, the acetate ion (CH3COO-), which is initially at equilibrium.

    KaIf more H+ ions are added

    to this solution, it drivesthe equilibrium in the

    direction of acetic acid

    formation and the pH

    changes little.

    If OH-

    ions are added

    to this solution, they combine

    with the H+ ions forming

    water and this drives

    the equilibrium in the

    opposite direction. The pHchanges little.

    Ka

    McKee p89

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    This is why, when we titrate (in the example below) a conjugate base by adding acid

    this kind of curve is obtained:

    acid

    Notice the pH changesless rapidly where

    pH = pKa (4.73) and

    +/- one unit.

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    Water itself is weakly buffered

    H2O  OH-

    H+

      +

    H+ 

    if we add extra H+ ions to water

    they will combine with OH- ionsto form water, driving the equilibrium

    towards H2O formation.

    • the problem is that the dissociation constant of water is so low, there are few OH-

    ions available to react with H+ ions. Thus when acid is added to

    pure water, the pH plummets immediately (we therefore view water as

    unbuffered).

    • Chemical reactions often produce or consume H+ ions. When we study these

    reactions in the lab, we do not want the pH of the reaction liquid to change.

    • Thus we add a buffer: a mixture of weak acid and its conjugate base to resist the

    change in pH that would otherwise occur and perhaps ruin (or confound)

    the experiment.

    Kw

    h d lb l h

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    The Henderson-Hasselbalch Equation

    • When choosing or making a buffer in the laboratory, pH and pKa are useful concepts

    The relationship between these quantities is expressed in theHenderson-Hasselbalch equation which is derived as below.

    [HA] Ka

    [A-] [H+]

    =[HA] 

    Ka

    [A

    -

    ]

     

    [H+] =

    [HA] Ka

    [A-] 

    [H+] =-log -log -log

    solving for [H+] gives

    taking the -log of each side gives

    pH = pKa[HA] 

    [A-] 

    -log

    pH = pKa

    [HA] 

    [A-] 

    + log

    remembering the definitions ofpH and pKa gives

    inverting the log term thus changing

    its sign, the H-H equation is

    obtained.

    [A ]

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    pH = pKa[HA] 

    [A-] + log

    • A titration curve reveals that the best buffering situation (where a solution best

    resists changes in pH when acid or base is added) occurs when the

    concentrations of the acid [HA] and its conjugate base [A-] are equal.

    • This situation occurs when the pH of the solution equals the pKa of the acid:

    pH = pKa[HA] 

    [A-] 

    + log

    pH = pKa + log (1) since log(1) = 0, then

    pH = pKa

    the most effective buffering occurs 1 pH unit above and below an acid’s pKa  

    S th ti d t ll i h i l b d t k b ff

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    Synthetic and naturally occurring chemicals can be used to make buffers

    if the experimental conditions demand that the solution be buffered between

    pH 3.5 and 5.5, then an acetate buffer (acetic acid pKa 4.73) would be good.

    if the solution needs to be buffered between pH 6 and 8 ( a typical pH rangewhen dealing with biological systems), the acetate buffer would be unsuitable and

    one would look for a buffer system with a pKa around 7

    U i h H d H lb l h i f l b ff

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    Using the Henderson-Hasselbalch equation to formulate buffer

    cetic acid has a pKa of 4.8. How many ml of 0.1 M acetic acid and 0.1 M Na acetate are

    required to prepare 1 litre of 0.1 M buffer solution having a pH of 5.8?

    pH = pKa[HA] [A

    -] + log

    5.8 = 4.8

    [HA] 

    [A-] 

    + log

    antilog (1) =[HA] 

    [A-]  10 =

    [HA] 

    [A-] 

    10 =

    10 volumes of acetate ion (Na acetate) must be added for every 1 volume of acetic acidequaling a total of 11 volumes.

    acetic acid needed

    acetate needed

    11

    1  x 1000 ml = 91 ml

    11

    10 

    x 1000 ml = 909 ml

    substitute desired pH and pKa into H-H

    equation

    solve for ratio of [A-]/[HA]

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    Practice Questions (Solutions will be posted on D2L).

    6. You are studying a enzyme in the laboratory that is only active between pH 5 and 8. You

    wish to study the activity in a buffer of pH 7. Pick the best buffer system for making your

    buffer:

    Buffer system pKa

    Tris/HCl 8.1

    Acetic acid/acetate 4.8

    Lactic acid/lactate 3.9

    Carbonate 6.4

    Bicarbonate 10.2

    Phosphate 7.2

    7. Formic acid has a pKa of 3.8. How many ml of 0.2 M formic acid and 0.2 M Na formate

    would you need to mix to make 0.5 litres of 0.2 M buffer solution having a pH of 3.8?

    8. Lactic acid has a pKa of 3.9. How many ml of 0.4 M lactic acid and 0.2 M Na lactatewould you need to mix to make 0.5 litres of 0.2 M buffer solution having a pH of 3.9?

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    Some acids have multiple ionizable H atoms

    CH3COOH  CH3COO-H+  +

    Acetic acid has one ionizable H atom:

    pKa = 4.8

    Phosphoric acid has 3 ionizable H atoms:

    H3PO4  H2PO4-H+  + pKa1 = 2.2

    H2PO4-  HPO4

    2-H+  + pKa2 = 7.2

    HPO42-  PO4

    3-H+  + pKa3 = 12.7

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    Many important biological acids

    and bases have 2 or more

    ionizable groups including

    the amino acids, which can

    also act as buffers.

    Phosphoric acid (H3PO4) is

    called a polyprotic acid.

    Moran p48

    N t ll i b ff t i bi l

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    Naturally occurring buffer systems in biology

    • Bicarbonate buffer - used to regulate the pH of blood, which must be very

    strictly controlled. Involves the bicarbonate ion HCO3- and CO2. The amount

    of CO2 in the blood is strictly controlled by the amount exhaled whenbreathing.

    • Phosphate buffer - used to regulate the pH inside of cells.

    Protein buffers - since there is a high concentration of protein in the body andin cells, the amino acids that make up proteins have a considerable buffering

    effect on pH. All amino acids have at least two ionizable groups, the amino

    group and the carboxylate group (as shown in this Aa below).

    Some amino acids also have ionizable side chains as well, as we will see later.

    C C

    CH3

    H OH

    O

    H3N+ C C

    CH3

    H O-

    O

    H3N+ C C

    CH3

    H

    O

    H2N 

    O-

    pKa1 = 2.3 pKa2 = 9.7

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    H2N  –  C  –  CO

    OHH

    R

     

    All possess:

    -an α Carbon to which is attached

    -an amino group

    -a carboxylic acid group

    -a hydrogen atom

    -a unique sidechain (R)

    Hints to get started on becoming familiar with Amino acids

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    H3N  –  C  –  C

    O

    O-H

    R

     

    –+

    The amino and carboxyl group can be ionized depending on the surrounding pH.

    At the pH typical of cytoplasm (pH 6.8  –  7.4, physiological pH) the amino group will be

    protonated and the carboxyl group will be deprotonated.

    Thus we typically draw amino acids in this form:

    The

    zwitterionic form of

    an amino acid

    i i d f f i id fully ionized form of amino acid

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    H3N  –  C  –  C

    O

    O-H

    R

     –+

    H2N  –  C  –  C

    O

    OHH

    R

     –

    non-ionized form of amino acid

    does not exist in appreciable amounts

    fully ionized form of amino acid

    -major form at physio pH (6.8-7.2)

    note all amino acids

    have ionized carboxyl

    group above pH 2

    and ionized aminogroup below

    pH 9-10

    Key Concepts

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    Key Concepts• Water itself ionizes to a very small degree into H+ (H3O

    +) ions and OH- ions

    • pH (a logarithmic scale) is used because the H+ concentrations can vary over such

    a vast range.

    • pKa (a logarithmic scale) is a measure of the ability of a weak acid to dissociate

    into H+ ions and the conjugate base of the weak acid

    • Buffers are mixtures of weak acids and their conjugate bases. They resist changes

    in pH.

    • The Henderson-Hasselbalch equation relates pH and pKa and is useful for creating

    buffers in the laboratory.

    Naturally occurring buffers regulate pH in the blood, in cells, and other body fluids.

    • pH influences the ionization state of many biomolecules and thus influences their

    chemical characteristics and the chemistry of the cell.

    • H+ ions participate ( are produced and consumed) in many chemical reactions in

    the cell