Late night thoughts of a jet-lagged phylogeneticist
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@rdmpage
Late night thoughts of a jet-lagged phylogeneticist
http://iphylo.blogspot.com
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Why aren’t we there yet?
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There is no “map of life”
http://vimeo.com/26210611
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@itoworld @openstreetmap
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@ben_fry
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@rdmpage
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Can we have a set of coordinates for the tree of life?
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Seeing the forest
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I want a Flickr for phylogeny
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@blaiseaguera
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My tree
Trees like this
Where is this tree?
Other trees near here
(data from http://phylota.net and GenBank)
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Beyond trees
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What do insects live on?
Host info from
GenBank sequence
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What lives on insects?
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http://iphylo.blogspot.com/2011/03/visualising-symbiome-hosts-parasites.html
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Connecting the tree to other data
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The Semantic web:
“The future of the web… and always will be” – Peter Norvig
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0, 1, n
There are only three numbers in computer science:
@stefanomaz
http://www.betaversion.org/~stefano/linotype/news/304/
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Links built by community, editable, versioned
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Wikis
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GeneWiki
Huss et al. 2008 doi:10.1371/journal.pbio.0060175
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http://iphylo.org/linkout
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When building shared resources carrots beat sticks
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Carrots beat sticks
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To build community resource ensure you have an answer for this:
“what’s in it for me?”