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CURRICULUM VITAE J. Michael Fitzpatrick Professor of Computer Science Vanderbilt University Nashville, Tennessee 37235 PERSONAL Date of Birth: May 25, 1945 Citizenship: US Marital Status: Married, two children EDUCATION BS 1967, University of North Carolina, Physics PhD 1972, Florida State University, Physics MS 1982, University of North Carolina, Computer Science EMPLOYMENT Before Vanderbilt Sep 1972 to Jan 1973 Postdoctoral Fellow, Department of Physics, Florida State University Jan 1973 to Jun 1973 Programmer, Florida Department of Transportation, Tallahassee Aug 1973 to Jul 1974 Postdoctoral Fellow, Chemistry, University of British Columbia Aug 1974 to May 1975 Visiting Instructor of Chemistry, Clemson University Aug 1975 to Aug 1979 Assistant Professor of Physics, Newberry College Jun 1977 to Aug 1977 Research Associate, Chemistry, University of British Columbia Aug 1978 to Aug 1980 Chair, Dept. Mathematics and Physics, Newberry College Aug 1979 to Aug 1980 Associate Professor of Physics, Newberry College Aug 1981 to Aug 1982 Systems Analyst, Dept. Radiology, North Carolina Memorial Hospital At Vanderbilt Assistant Professor: Computer Science, Sep 1982 to Aug 1990 Radiology, Sep 1984 to Jun 1992 Neurosurgery, Jan 1990 to Aug 1994 Associate Professor:

Transcript of J - Electrical Engineering and Computer Science |...

CURRICULUM VITAE

J. Michael FitzpatrickProfessor of Computer Science

Vanderbilt UniversityNashville, Tennessee 37235

PERSONAL

Date of Birth: May 25, 1945Citizenship: USMarital Status: Married, two children

EDUCATION

BS 1967, University of North Carolina, Physics

PhD 1972, Florida State University, Physics

MS 1982, University of North Carolina, Computer Science

EMPLOYMENT

Before VanderbiltSep 1972 to Jan 1973 Postdoctoral Fellow, Department of Physics, Florida State UniversityJan 1973 to Jun 1973 Programmer, Florida Department of Transportation, TallahasseeAug 1973 to Jul 1974 Postdoctoral Fellow, Chemistry, University of British ColumbiaAug 1974 to May 1975 Visiting Instructor of Chemistry, Clemson UniversityAug 1975 to Aug 1979 Assistant Professor of Physics, Newberry CollegeJun 1977 to Aug 1977 Research Associate, Chemistry, University of British ColumbiaAug 1978 to Aug 1980 Chair, Dept. Mathematics and Physics, Newberry CollegeAug 1979 to Aug 1980 Associate Professor of Physics, Newberry CollegeAug 1981 to Aug 1982 Systems Analyst, Dept. Radiology, North Carolina Memorial Hospital

At VanderbiltAssistant Professor:

Computer Science, Sep 1982 to Aug 1990Radiology, Sep 1984 to Jun 1992 Neurosurgery, Jan 1990 to Aug 1994

Associate Professor:

Computer Science, Aug 1990 to Aug 1999 Radiology, Jul 1993 to Aug 1999 Neurosurgery, Sep 1994 to Feb 2003Computer Engineering, Jan 1994 to Aug 1999

Professor:

Computer Science, Computer Engineering, and Radiology, Aug 1999 to Dec 2010Neurosurgery, Feb 2003 to Dec 2010, Electrical Engineering Apr, 2006 to Dec 2010

Professor emeritus:

Computer Science, Computer Engineering, Electrical Engineering, Neurosurgery, and Radiology, Jan, 2011-present

Research professor:

Computer science, Jan 2011-present

J. MICHAEL FITZPATRICK, PHD CURRICULUM VITAE 2SERVICE

Editorship M. Sonka and J. M. Fitzpatrick, ed., Proc. of Medical Imaging 2002: Image Processing P. Jannin, J. M. Fitzpatrick, D. J. Hawkes, X. Pennec, R. Shahidi, Guest Ed., IEEE Transactions on Medical Imaging,

21(12), 2002. M. Sonka and J. M. Fitzpatrick, ed., Proc. of Medical Imaging 2003: Image Processing J. P. W. Pluim and J. M. Fitzpatrick, Assoc. Ed., IEEE Transactions on Medical Imaging, 22(11), Special Issue on

Registration, 2003. J. M. Fitzpatrick and M. Sonka, ed., Proc. of Medical Imaging 2004: Image Processing J. M. Fitzpatrick and J. Reinhardt, ed., Proc. of Medical Imaging 2005: Image Processing Advisory Editor, SPIE Journal of Medical Imaging , ed. Maryellen Giger, 2013-present.

Program Review Doctoral Program, Technishe Univeersität Graz, Vienna, Austria.

Journal Reviewing Annals of Biomedical Engineering Computer Vision and Image Understanding Computer Vision, Graphics, and Image Processing Epilepsia IBM Journal of Research and Development IEEE Transactions on Biomedical Engineering IEEE Transactions on Electronics Packaging Manufacturing IEEE Transactions on Medical Imaging IEEE Transactions on Pattern Analysis and Machine Intelligence International Journal of Computer Assisted Radiology International Journal of Computer Vision Journal of Biomedical Optics Journal of Computer Assisted Tomography Lecture Notes in Computer Science Magnetic Resonance Imaging Medical Image Analysis Medical Physics Neuroimage Neurosurgery Physics in Medicine and Biology

Conference Reviewing Computer-Based Medical Systems Symposium (1992) SPIE Medical Imaging Symposia (1996–2005) Medical Image Computing and Computer-Assisted Intervention (1998, 1999, 2001-2005, 2007, 2009-2011)

Program/Workshop Organization Computer-Based Medical Systems Symposium session chair, “Image Segmentation and Classification” (1992) Image Processing Workshop organizer at the SPIE Symposium on Medical Imaging (1996) Image Processing session chair at the SPIE Symposium on Medical Imaging (1996–2003) Session organizer, PHS/NCI “Computer Aided Diagnosis and 3-D Image Display and Analysis” (1998) Program Committee of the Intnl. Workshop on Biomedical Image Registration (1999) Program Committee of the Workshop on Analysis of Volumetric Images (2000) Program Committee of Medical Image Computing and Computer Assisted Intervention (MICCA) (2002-2012) Co-chair Image Processing Conference at the SPIE Medical Imaging Symposium (2002-2005) Co-organizer of Workshop on Geometrical Accuray in Image-Guided Interventions, held at MCCAI (2009) Co-organizer of the Workshop on Biomedical Image Registration (2012)

J. MICHAEL FITZPATRICK, PHD CURRICULUM VITAE 3University Senator (1992-95) Patent Committee (1992-96) Business and Non-Academic Affairs Committee (1992-95) Computational Science Committee (1996) Advisor to Vanderbilt Computer Society (2000-present) Technology Review Committee (2007-present)

Engineering School Computer Committee (1988-89, 1990-91, 1992-94, 1996-97) Ad Hoc Staff Organization Committee (1992-93) Space Committee (1994-95) Computer Engineering Curriculum Committee (1996-97) Computer Engineering Advisor (1996-97) Safety Committee (1996-97) Instructional Technology Committee (1998-2000) Engineering Research Council (1998-99) Computer Science Chair Search (1998-99) Ad Hoc Freshman Year(1998-1999) Ad Hoc Promotion (1999, 2001, 2002, 2003) Promotion and Tenure (2000-01) Information Technology (1999-present)

Computer Science Department Graduate Student Organization Advisor (1986-89) New Building Space Committee (1987-88) Curriculum (1989-90) Computing Committee (1990-91, 1992-94) Tenure and Personnel Committee (1990-91, 1992-96) Undergraduate Curriculum Committee (1990-91) C Language Task Force (1992-93) Class of 1997 Advisor (1993-97) Jacobs Hall Space Committee (1996-97) Faculty Search Committee (1997-98) CSAB Accreditation Committee (1997-98) Class of 2010 Advisor (2006-2012)

Electrical Engineering and Computer Science Department Ad Hoc Contract-Renewal Committee (1999-2000) Strategic Planning Committee (1999-2000) Director of Undergraduate Studies (2001-2004) Computer Science Undergraduate Curriculum (2006-present)

HONORS AND AWARDS

National Defense Education Act Graduate Fellowship 1967-1970 1997 Giovanni Di Chiro Award for Outstanding Scientific Research, Journal of Computer Assisted Tomography Fellow of the SPIE, International Society for Optical Engineering, elected 2007 Fellow of the IEEE, elected 2010 2012 Friend of Otolaryngology Research, Vanderbilt University

J. MICHAEL FITZPATRICK, PHD CURRICULUM VITAE 4THESIS DIRECTION

1. John M. Weiss, A comparison of techniques for the estimation of ultrasonic attenuation coefficients, M.S., Computer Science (Aug 1985).

2. Christine A. Pedersen, A method for calculating fluid flow in time dependent density images, M.S., Biomedical Engineering (May 1988).

3. Gary R. McNeal, Tissue Segmentation in Magnetic Resonance Images of Brain: A Clustering Analysis Approach, M.S., Biomedical Engineering (Dec 1988) [co-supervisor with C. Leon Partain and Paul H. King].

4. James E. Baker, An analysis of the effects of selection in genetic algorithms, Ph.D., Computer Science (May 1989) [co-supervisor with John J. Grefenstette].

5. Hsuan Chang, Geometrical Image Transformation to Compensate for Susceptibility Artifacts in Magnetic Resonance Imaging, Ph.D., Computer Science (Aug 1990).

6. Venkateswara R. Mandava, A technique for search space adaptation with simulated annealing and genetic algorithms in image registration, M.S., Computer Science (Oct 1987) and Three Dimensional Multimodal Image Registration Using Implanted Markers, Ph.D., Computer Science (Dec 1991).

7. Mehmed Ozkan, Semi-automatic Stereotactic Radiosurgery with Neural Network-based Multimodal Image Segmentation and Geometric Analysis of the Lesion, Ph.D., Electrical Engineering (Dec 1991) [co-supervisor with Kazuhiko Kawamura].

8. Yaorong Ge, Cortical Surface Maps and Euclidean Skeletons for Intersubject Brain Image Registration, Ph.D., Computer Science (May 1995).

9. Calvin R. Maurer, Jr., Registration of Multimodal Three-dimensional Medical Images Using Points and Surfaces, Ph.D., Biomedical Engineering (Dec 1996).

10. Matthew Y. Wang, Fiducial Marker Recognition and Localization for Image-Guided surgery Using Point-Based Registration, Ph.D., Computer Science (May 1998).

11. Jay B. West, Comparison and evaluation of retrospective intermodality image registration techniques, M.S., Computer Science (Aug 1996) and Predicting Error in Point-Based Registration, Ph.D., Computer Science (Dec 2001)..

12. Duane A. Yoder, The Simulation and Rectification of Echo Planar Images, Ph.D., Computer Science (Aug 2003).

13. Yong Li, Nonrigid Registration Based Method for Correction of Distortions in Echo Planar Images, Ph.D., Computer Science (Dec 2007) [co-supervisor with Benoit M. Dawant].

14. Ning Xu, Correction Of Image Distortion in Echo Planar Image Series Using Phase And Intensity, Ph.D., Computer Science (May 2008).

15. Ramya Balachandran, Measurement and Analysis of Error in Rigid-Body Point-Based Registration Systems, Ph.D., Computer Science (May 2008).

16. Christopher C. Heath, Disablement of a Surgical Drill Via CT Guidance to Protect Vital Anatomy, M.S., Electrical Engineering (August 2008).

17. Jack H. Noble, Automatic Determination of Optimal Surgical Drilling Trajectories for Cochlear Implant Surgery, M.S., Electrical Engineering (December 2008).

18. Andrei Danilchenko, Fiducial-Based Registration with Anisotropic Localization Error, Ph.D. Computer Science (May 2011).

LICENSED SOFTWARE

Displaytool, a program for interactive image display on Sun workstations (1988). Developed with PhD candidate, Hsuan Chang. Distributed to twelve institutions in the U. S. and Canada. (The first software licensed by Vanderbilt University for sale.)

PATENTS

1. J. M. Fitzpatrick and Hsuan Chang, “Method for Magnetic Resonance Imaging and Related Apparatus”, Patent No. 5,099,208, United States Patent and Trademark Office (Mar 24, 1992).

2. George S. Allen, Robert J. Maciunas, John M. Fitzpatrick, Venkateswara R. Mandava, Hsuan Chang, “Method and Apparatus for Imaging the Anatomy”, Patent No. 5,222,499, United States Patent and Trademark Office (Jun 29, 1993).

3. J. Michael Fitzpatrick, Jennifer J. McCrory, “Method for relating the data of an image space to physical space”, Patent No. 5,551,429, United States Patent and Trademark Office (Sep 3, 1996).

4. J. Michael Fitzpatrick, Jennifer J. McCrory, “Localization Cap for Fiducial Markers”, Patent No. 5,730,130, United States Patent and Trademark Office (Mar 24, 1998).

5. Matthew Wang, Calvin R. Maurer, Jr., and J. Michael Fitzpatrick, “Automatic Technique for Localizing Externally Attached Markers in Volume Images of the Head”, Patent No. 5,769,789, United States Patent and Trademark Office (June 23, 1998).

6. Matthew Wang, Calvin R. Maurer, Jr., and J. Michael Fitzpatrick, “Automatic Technique for Localizing Externally Attached Markers in Volume Images of the Head” (same name but distinct from 5,769,789), Patent No. 5,799,099, United States Patent and Trademark Office (August 25, 1998).

7. Robert J. Maciunas, J. Michael Fitzpatrick, Calvin R. Maurer, Jr., Jennifer J. McCrory, and Rory Randall, “Biopsy Guide”, Patent No. 5,984,930, United States Patent and Trademark Office (Nov 16, 1999).

8. Matthew Wang, Calvin R. Maurer, Jr., and J. Michael Fitzpatrick, “Automatic Technique for Localizing Externally Attached Markers in Volume Images of the Head” (same name but distinct from 5,769,789 and 5,799,099), Patent No. 6,052,477, United States Patent and Trademark Office (April 18, 2000).

9. J. Michael Fitzpatrick, Jennifer J. McCrory, “Method for determining the location in physical space of a fiducial marker that is selectively detachable to a base”, Patent No. 6,073,044, United States Patent and Trademark Office (June 6, 2000).

10. Jennifer J. McCrory, J. Michael Fitzpatrick, M. Robert Willcott, Robert J. Maciunas, Calvin R.

Maurer, Jr., and George S. Allen, “Fiducial Marker”, Patent No. 6,333,971, United States Patent and Trademark Office (December 25, 2001).

11. Calvin R. Maurer, Jr., Robert J. Maciunas, and J. Michael Fitzpatrick, “Apparatus and Method for Registration of Images to Physical Space using a Weighted Combination of Points and Surfaces”, Patent No. 6,560,354, United States Patent and Trademark Office (May 6, 2003).

12. Benoit M. Dawant, Peter E. Konrad, and J. Michael Fitzpatrick, “Apparatus and method of optimal placement of deep brain stimulator”, Patent No. 7,167,760, United States Patent and Trademark Office (January 23, 2007).

13. J. Michael Fitzpatrick, “Apparatus and methods of determining marker orientation in fiducial registration”, Patent No. 7,646,899, United States Patent and Trademark Office (January 12, 2010).

14. Changquing C. Kao, J. Michael Fitzpatrick, Robert F. Labadie, and Peter E. Konrad, “Adjustable universal surgical platform”, Patent No. 7,794,469, United States Patent and Trademark Office (September 14, 2010).

15. Robert F. Labadie and J. Michael Fitzpatrick, “System and method for surgical instrument disablement via image-guided position feedback”, Patent No. 7,899,512, United States Patent and Trademark Office (March 1, 2011).

16. Robert F. Labadie, J. Michael Fitzpatrick, and Jason Mitchell, “Adjustable surgical platform and surgical instrument using same”, Patent No. 7,981,122, United States Patent and Trademark Office (July 19, 2011).

17. Changquing C. Kao, J. Michael Fitzpatrick, Robert F. Labadie, and Peter E. Konrad, “Apparatus for supporting an adjustable universal surgical platform”, Patent No. 8,414,597, United States Patent and Trademark Office (April 9, 2013).

18. J. Michael Fitzpatrick, “System and method for point-based rigid registration with anisotropic weighting”, Patent No. 8,615,127, United States Patent and Trademark Office (December 24, 2013).

19. Jason E. Mitchell, Robert F. Labadie, and J. Michael Fitzpatrick, “Microstereotactic table”, Patent No 8,771,290, United States Patent and Trademark Office (July 8, 2014).

INVITED TALKS

1. “A Technique for MRI Image Rectification”, General Electric Company Corporate Research and Development, Schenectady, New York, November 20, 1989.

2. “Computer Assisted Navigation in Neurosurgery: An Application of Solid Geometry”, William F. Meachum Society, Vanderbilt University School of Medicine, Nashville, TN, October 22, 1993.

3. “Image Guided Neurosurgery with Acustar”, General Electric Company Corporate Research and Development, Schenectady, New York, August 4, 1994.

4. “Computers and Brain Surgery: The Story of Acustar I”, Department of Mathematics and Computer Science, Wake Forest University, Winston-Salem, North Carolina, April 26, 1994.

5. “Geometrical ‘Accuracy in MR Imaging: Why we Need it and How We Get It”, Department of Radiology, Bowman Gray School of Medicine, Winston-Salem, North Carolina, April 27, 1994.

6. “Registering Medical Images for Neurosurgical Navigation”, Scientific Symposium on Interactive Image-Guided Surgery, Sponsored by Johnson & Johnson Professional, Inc., Orlando, Florida, April 24, 1995.

7. “Assessment of the Accuracy of Medical Image Registration”, Workshop on Issues in Multimodality Medical Image Registration, Sponsored by the National Center for Technology Transfer, Irvine, California, February 22, 1997.

8. “Fiducial-Based Image Registration for Neurosurgical Navigation”, Biophysics-Bioengineering Seminars, Biomedical Imaging Resource, Mayo Clinic, Rochester, MN, 1997.

9. “Metrics for the Assessment of Registration”, Second Workshop on Issues in Multimodality Medical Image Registration, Sponsored by the National Center for Technology Transfer, Mayo Clinic, Rochester, MN, June 21, 1997.

10. “A blinded evaluation and comparison of image registration methods”, Workshop on Empirical Evaluation Techniques in Computer Vision”, Sponsored by IEEE Computer Society, University of California at Santa Barbara, CA, July 22, 1998.

11. “Validation: A Case Study”, Fourth Mayneord Phillips Summer School, Medical Image Processing, Visualization, and Analysis, St. Edmund Hall, Oxford, UK, July 14, 1999.

12. “Validation of Registration Algorithms: A Case Study”, Medical Image Understanding and Analysis, 3rd Ann. Conference, Examination Schools, Oxford, UK, Sponsored by Brit. Mach. Vis. Assoc., Brit. Inst. of Radiology, Inst. of Elec. Eng., July 21, 1999.

13. “Solved and unsolved problems in point-based, rigid registration”, Intl. Workshop on Biomedical Image Registration, Bled, Slovenia, Sponsored by the Intl. Assoc. for Patt. Recog., August 31, 1999.

14. “Solved and unsolved problems in point-based, rigid registration”, Seminar series, Department of Computer Science and Engineering, U. South Florida, Tampa, FL, October 19, 1999.

15. “Validating Registration Algorithms: A Case Study”, Workshop on the Performance Evaluation of Medical Image Processing Algorithms, James C. Gee and Robert M. Haralick, Moderators, SPIE Medical Imaging 2000 Symposium, San Diego, CA, 15 February 2000.

16. “Proving navigational accuracy to the FDA: Acustar’s trial”, Special Session on Validation of Medical Image Processing in the Context of Image-Guided Therapy, 6th Ann. Conf. of Intnl. Society for Computer Aided Surgery, Paris, FR, June 28, 2002.

17. “A Project for the Evaluation of the Registration of Images of the Head”, Tutorial on Validation in Medical Image Processing, Medical Image Computing and Computer Assisted Intervention, Montreal, CA, November 15, 2003.

18. “Validating Rigid Registrations via Fiducial Markers”, Workshop on Validation in Medical Image Registration, SPIE Medical Imaging Symposium, San Diego, CA, February 18, 2007.

19. “Medical Image Registration at Vanderbilt”, Institute of Robotics, Leibniz University, Hannover, Germany, November 3, 2008.

20. “Medical Image Registration at Vanderbilt”, Department of Oral and Cranio-Maxillofacial Surgery, Heidelberg University Hospital, Heidelberg, Germany, November 6, 2008.

21. “Medical Image Registration at Vanderbilt”, Institute for Process Control and Robotics, University of Karlsruhe, Karlsruhe, Germany, November 7, 2008.

22. “Medical Image Registration at Vanderbilt”, Institute of Mathematics, University of Lübeck, Lübeck, Germany, November 12, 2008.

23. “Percutaneous Cochlear Implantation”, Robarts Research Institute, London, Ontario, Canada, August 14, 2009.

24. “TRE, FRE, FLE: Twenty Years”, keynote address, Workshop on Biomedical Image Registration, Vanderbilt University, Nashville, TN, July 8, 2012.

25. “Twenty-five Years of Error”, keynote address, Conference on Image-Guided Procedures, Robotic Interventions, and Modeling, SPIE Symposium on Medical Imaging, February 24, 2015.

PUBLICATIONS *Asterisks indicate students directed by Fitzpatrick.

Click here for list of Google Scholar Citations

Books

1. M. Sonka and J. M. Fitzpatrick, ed., Medical Image Processing and Analysis, Volume II of the Handbook of Medical Imaging , ISBN: 978-0819477606SPIE Press Bellingham, WA (July, 2000).

2. J. M. Fitzpatrick and A. Lédeczi, Computer Programming with MATLAB (electronic media:

Apple iBook and PDF), ISBN: 978-0-615-75113-9, Fitzle LLC, Nashville, TN (January, 2013).

3. R. F. Labadie and J. M. Fitzpatrick, Image-Guided Surgery: Fundamentals and Clinical Applications in Otolaryngology , ISBN: 978-1597567190, Plural Publishing, Inc., San Diego, CA (to appear April 2016).

On-line Coursework

4. J.M. Fitzpatrick, A. Ledeczi, and Robert Tairas, “Introduction to Programming with MATLAB”, 12-hours of video lectures produced at Vanderbilt University (2015-2016). Scheduled sessions: Coursera, April-June, 2015, July-September, 2015, October-December, 2015 On demand: cs103.net

Book Chapters

5. C. R. Maurer, Jr.* and J. M. Fitzpatrick, “A review of medical image registration”, Interactive Image-Guided Neurosurgery, Robert J. Maciunas, editor, American Association of Neurological Surgeons, Park Ridge, IL, pp. 17–44 (1993).

6. R. J. Maciunas, J. M. Fitzpatrick, R. L. Galloway, and G. S. Allen, “Beyond stereotaxy: Extreme levels of application accuracy are provided by implantable fiducial markers for interactive image-guided neurosurgery”, Interactive Image-Guided Neurosurgery, Robert J. Maciunas, editor, American Association of Neurological Surgeons, Park Ridge, IL, pp. 259-270 (1993).

7. R. J. Maciunas, J. M. Fitzpatrick, R. L. Galloway, and G. S. Allen, “Implantable fiducial markers for interactive, image-guided neurosurgery: the Vanderbilt Acustar I Advanced Surgical Navigational System” Textbook of Stereotactic and Functional Neurosurgery, P. L. Gildenberg and R. R. Tasker, editors, McGraw-Hill, New York, pp. 195–200 (1998)

8. R. J. Maciunas, R. L. Galloway, J. M. Fitzpatrick, M. L. Copeland, and G. S. Allen, “Interactive

image-guided techniques for the biopsy and resection of metastatic cerebral tumors”, Advanced Techniques in Central Nervous System Metasteses, R. J. Maciunas, editor, American Association of Neurological Surgeons, Park Ridge, IL, pp. 95–112 (1998).

9. J. M. Fitzpatrick, D. L. G. Hill, and C. R. Maurer, Jr.*, “Registration”, Medical Image Processing, Volume II of the Handbook of Medical Imaging, M. Sonka and J. M. Fitzpatrick, ed., SPIE Press, 447-513 (July, 2000).

10. J. M. Fitzpatrick, “Detecting failure, assessing success” Medical Image Registration, J.V. Hajnal, D. L. G. Hill, and D. J. Hawkes, ed., CRC Press, Chapter 6, 117-139 (June, 2001).

Edited Conference Proceedings

11. Milan Sonka and J. M. Fitzpatrick, ed., Medical Imaging 2002: Image Processing, vol. 4684 Proc. SPIE, SPIE Press (May 2002).

12. Milan Sonka and J. M. Fitzpatrick, ed., Medical Imaging 2003: Image Processing, vol. 5032 Proc. SPIE, SPIE Press (May 2003).

13. J. M. Fitzpatrick and Milan Sonka, ed., Medical Imaging 2004: Image Processing, vol. 5370 Proc. SPIE, SPIE Press (May 2004).

14. J. M. Fitzpatrick and J. M. Reinhardt, ed., Medical Imaging 2005: Image Processing, vol. 5747 Proc. SPIE, SPIE Press (April 2005).

15. B. M. Dawant, G. E. Christensen, J. M. Fitzpatrick, and D. Rueckert, Biomedical Image Registration 5 th Intnl. Workshop, WBIR 2012, Lecture Notes in Computer Science, vol. 7359 (July 2012). DOI: 10.1007/978-3-642-31340-0

Archival Journal Articles

16. J. M. Fitzpatrick and E. A. Desloge, “Nonequilibrium gas reaction kinetics: the nonvanishing effect of vanishing products,” J. Chem. Physics 59, 5526–5528 (Nov 1973).

17. B. Shizgal and J. M. Fitzpatrick, “Matrix elements of the linear Boltzmann collision operator for systems of two components at different temperatures,” Chem. Physics 6, 54–65 (Oct 1974).

18. B. Shizgal and J. M. Fitzpatrick, “Temperature relaxation in a binary gas I: steady state solution,” J. Chem. Physics 63, 131–137 (Jul 1975).

19. B. Shizgal and J. M. Fitzpatrick, “Temperature relaxation in a binary gas II: time dependent solution,” J. Chem. Physics 63, 138–142 (Jul 1975).

26. B. Shizgal and J. M. Fitzpatrick, “The possible failure of relaxation time comparisons in the justification of local thermodynamic equilibrium,” Physical Rev. 18, 267–276 (Jul 1978).

27. J. M. Fitzpatrick and B. Shizgal, “Explicit demonstration of epochal relaxation in a binary gas mixture,” Physics of Fluids 22, 436–438 (Mar 1979).

28. B. Shizgal and J. M. Fitzpatrick, “On the statistical mechanical interpretation of the translational energy dependence of rate processes,” Canadian J. Physics 57, 486–489 (Mar 1979).

29. B. Shizgal and J. M. Fitzpatrick, “Nonequilibrium time dependent theory of hot atom reactions I: Model calculations,” J. Chem. Physics 72, 3143–3155 (Mar 1980).

30. J. M. Fitzpatrick and Michael R. Leuze, “A class of one-to-one two dimensional transformations”, Computer Vision, Graphics, and Image Processing 39, 369–382 (Sep 1987).

31. J. M. Fitzpatrick, D. R. Pickens, J. J. Grefenstette, R. R. Price, A. E. James, “Techniques for automatic motion correction in digital subtraction angiography”, Optical Eng. 26, 1085–1093 (Nov 1987).

32. J. M. Fitzpatrick and J. J. Grefenstette, “Genetic algorithms in noisy environments”, Machine Learning 3 , 101–120 (Oct 1988).

33. J. M. Fitzpatrick, “The existence of geometrical density-image transformations corresponding to object motion”, Computer Vision, Graphics, and Image Processing 44, 155–174 (Nov 1988).

34. G. R. McNeal*, W. H. Maynard, R. A. Branch, T. A. Powers, P. A. Arns, K. Gunter, J. M. Fitzpatrick, and C. L. Partain, “Liver volume measurements and three dimensional display from MR images”, Radiology 169, 851–854 (Dec 1988).

35. V. R. Mandava*, J. M. Fitzpatrick, and D. R. Pickens, “Adaptive search space scaling in digital image registration”, IEEE Transactions on Medical Imaging 8 , 251–262 (Sep 1989).

36. V. R. Mandava*, R. J. Maciunas, and J. M. Fitzpatrick, “Tapetool: a software tool for importing image data from image acquisition computers to image processing computers”, Computer Methods and Programs in Biomedicine 213–219 (Dec 1990).

37. H. Chang* and J. M. Fitzpatrick, “A technique for accurate magnetic resonance imaging in the presence of field inhomogeneities”, IEEE Transactions on Medical Imaging 11 , 319–329 (Sep 1992). PMID: 18222873

38. R. J. Maciunas, R. L. Galloway, J. M. Fitzpatrick, V. R. Mandava*, C. E. Edwards*, and G. S. Allen, “A universal system for interactive image-directed neurosurgery”, Stereotactic Functional Neurosurgery 58, 108–113 (1992).

39. J. M. Fitzpatrick and L. L. Schumaker, “On one-to-one bivariate transformations”, J. Approximation Theory 72, 40–53 (Jan 1993).

40. Y. Ge* and J. M. Fitzpatrick, “A set of one-to-one two-dimensional biquadratic transformations”, Computers & Mathematics with Applications 27, 13–25 (Jul 1994).

41. Y. Ge*, J. M. Fitzpatrick, J. R. Votaw, S. Gadamsetty*, R. J. Maciunas, R. M. Kessler, and R. A. Margolin, “Retrospective registration of PET and MR brain images: an algorithm and its stereotactic validation”, Journal of Computer Assisted Tomography 18, 800–810 (Sep-Oct 1994).

42. M. Y. Wang*, C. R. Maurer*, Jr., J. M. Fitzpatrick, and R. J. Maciunas, “An automatic technique for finding and localizing externally attached markers in CT and MR volume images of the head”, IEEE Transactions on Biomedical Engineering 43 , 627– 637 (Jun 1996). PMID: 8987267

43. C. Maurer*, Jr., G. B. Aboutanos*, B. M. Dawant, S. Gadamsetty*, R. A. Margolin, R. J. Maciunas, and J. M. Fitzpatrick, “Effect of geometrical distortion correction in MR on image registration accuracy”, Journal of Computer Assisted Tomography 20 , 666–679 (Jul-Aug 1996). [This article is substantially identical to Conference Proceedings article 117.]

44. Y. Ge*, J. M. Fitzpatrick, B. M. Dawant, J. Bao*, R. M. Kessler, and R. A. Margolin, “Accurate localization of cortical convolutions in MR brain images”, IEEE Transactions on Medical Imaging 15, 418–428 (Aug 1996).

45. Y. Ge* and J. M. Fitzpatrick, “On the generation of skeletons from discrete Euclidean distance maps”, IEEE Transactions on Pattern Analysis and Machine Intelligence 18, 1055-1066 (Nov 1996).

46. C. R. Maurer*, Jr., G. B. Aboutanos*, B. M. Dawant, and J. M. Fitzpatrick, “Registration of 3-D images using weighted geometrical features”, IEEE Transactions on Medical Imaging 15, 836–849 (Dec 1996).

47. R. J. Maciunas, J. M. Fitzpatrick, S. Gadamsetty*, C. R. Maurer*, Jr., “A universal method for geometric correction of magnetic resonance images for stereotactic neurosurgery”, Stereotactic Functional Neurosurgery 66, 137–140 (1996). [Note: This article is identical to Conference Proceedings article .]

48. J. West*, J. M. Fitzpatrick, M. Y. Wang*, B. M. Dawant, C. R. Maurer*, Jr., R. M. Kessler, R. J. Maciunas, et al., “Comparison and evaluation of retrospective intermodality image registration techniques”, Journal of Computer Assisted

Tomography 21 , 554–566 (Jul-Aug 1997). PMID: 9216759[THIS PAPER WAS ONE OF TEN WINNERS OF THE INAUGURAL GIOVANNI DI CHIRO AWARD FOR OUTSTANDING SCIENTIFIC RESEARCH, PRESENTED BY THE JOURNAL OF COMPUTER ASSISTED TOMOGRAPHY.]

49. C. R. Maurer*, Jr., J. M. Fitzpatrick, M. Y. Wang*, R. L. Galloway, Jr., R. J. Maciunas, G. S. Allen, “Registration of head volume images using implantable fiducial markers”, IEEE Transactions on Medical Imaging 16 , 447–462 (Aug 1997). PMID: 9263002

50. B. B. Burkey, M. T. Speyer, R. J. Maciunas, J. M. Fitzpatrick, R. L. Galloway, G. S. Allen, “Sublabial, transseptal, transsphenoidal approach to the pituitary region guided by the ACUSTAR system”, Otolaryngology—Head and Neck Surgery 118 , 191– 194 (Feb 1998).

51. D. L. G. Hill, C. R. Maurer*, Jr., C. Studholme, J. M. Fitzpatrick, D. J. Hawkes, “Correcting scaling errors in tomographic images using a nine degree of freedom registration algorithm”, Journal of Computer Assisted Tomography 22, 317–323 (Mar-Apr 1998).

52. J. M. Fitzpatrick, D. L. G. Hill, Y. Shyr, J. B. West*, C. Studholme, C. R. Maurer*, Jr. “Visual assessment of the accuracy of retrospective registration of MR and CT images of the brain”, IEEE Transactions on Medical Imaging 17 , 571– 585 (Aug 1998).

53. D. L. G. Hill, C. R. Maurer*, Jr., R. J. Maciunas, J. A. Barwise, J. M. Fitzpatrick, and M. Y. Wang*, “Measurement of intraoperative brain surface deformation under a craniotomy”, Neurosurgery 43, 514–526 (Sep 1998).

54. J. M. Fitzpatrick, J. B. West*, C. R. Maurer*, Jr., “Predicting error in rigid-body, point-based image registration”, IEEE Transactions on Medical Imaging 17 , 694–702 (Oct 1998) . PMID: 9874293

55. J. L. Herring*, B. M. Dawant, C. R. Maurer*, Jr., D. Muratore*, R. L. Galloway, J. M. Fitzpatrick, “Surface-based registration of CT images to physical space for image-guided surgery of the spine: a sensitivity study”, IEEE Transactions on Medical Imaging 17, 743–752 (Oct 1998).

56. C. R. Maurer*, Jr., R. J. Maciunas, J. M. Fitzpatrick, “Registration of head CT images to physical space using a weighted combination of points and surfaces”, IEEE Transactions on Medical Imaging 17, 753–761 (Oct 1998).

57. J. B. West*, J. M. Fitzpatrick, M. Y. Wang*, B. M. Dawant, C. R. Maurer*, Jr., R. M. Kessler, and R. J.

Maciunas, “Retrospective intermodality registration techniques: surface-based versus volume-based”, IEEE Transactions on Medical Imaging 18 , 144– 150 (Feb 1999).

58. F. Shtern, M. W. Vannier, D. Winfield, K. Doi, J. S. Duncan, J. M. Fitzpatrick, R. Kikinis, C. A. Pelizzari, S. M. Pizer, R. A. Robb, C. J. Vyborny, “Report of the working group on digital mammography: Computer-aided diagnosis and 3D image analysis and display”, 48th Ann. Meeting Assn. Univ. Radiologists, Orlando, FL, April 5–9, 2000, Academic Radiology, 6, Supplement 5, S224–S256 (June 1999).

59. J.D. Stefansic, A.J. Herline, Y. Shyr, W.C. Chapman, J.M. Fitzpatrick, and R.L. Galloway, “Registration of physical space to laparoscopic image space for use in minimally invasive hepatic surgery”, IEEE Transactions on Medical Imaging 19, 1012–1023 (Oct 2000).

60. J. B. West*, J. M. Fitzpatrick, S. Toms, C. R. Maurer, Jr.*, R. J. Maciunas, “Fiducial point placement and the accuracy of point-based, rigid-body registration”, Neurosurgery 48 , 810–817 (April 2001). PMID: 11322441

61. J. M. Fitzpatrick and R. L Galloway, “The use of fiducials in the registration of 3D images”, Automedica: Special Issue: Engineering Approaches to Neurological Surgery 20 (Jun 2001).

62. J. M. Fitzpatrick and J. B. West*, “The distribution of target error in rigid-body, point-based registration”, IEEE Transactions on Medical Imaging 20 , 917–927 (Sep 2001). PMID: 11585208

63. P. Jannin, J. M. Fitzpatrick, D. J. Hawkes, X. Pennec, R. Shahidi, M. W. Vannier, “Validation of medical image processing in image-guided therapy”, IEEE Transactions on Medical Imaging 21 (12), 1445–1448 (Dec 2002).

64. D. A. Yoder*, Y. Zhao, C. B. Paschal, J. M. Fitzpatrick, “MRI simulator with object-specific field map calculations”, Magnetic Resonance Imaging , 22 , 315–328 (Apr 2004).

65. W.C. Lavely, C. Scarfone, H. Cevikalp, R. Li, D. W. Byrne, A. J. Cmelak, B. M. Dawant, R. R. Price, D. E. Hallahan, J. M. Fitzpatrick, “Phantom validation of coregistration of PET and CT for image-guided radiotherapy”, Medical Physics , 31 , 1084–1092 (May 2004).

66. W. R. Riddle, R. Li, J. M. Fitzpatrick, S. C. DonLevy, B. M. Dawant, R. R. Price, “Characterizing Changes In MR images with color-coded Jacobians”, Magnetic Resonance Imaging 22, 769–777 (Jul 2004).

67. Z. Cao, S. Pan, R. Li, R. Balachandran*, J. M. Fitzpatrick, W. C. Chapman., B. M. Dawant, “Registration of Medical Images Using an Interpolated Closest Point Transform: Method and Validation”, Medical Image Analysis, 8, 421–427 (Dec 2004).

68. R. F. Labadie, R. J. Shah*, S. S. Harris, E. Cetinkaya*, D. S. Haynes, M. Fenlon, S. Juscyzk, R. L. Galloway, J. M. Fitzpatrick, “Submillimetric Target-Registration Error using a Novel, Non-Invasive Fiducial System for Image Guided Otologic-Surgery”, J. Computer-Aided Surgery, 9 (4), 145-153 (December 2004).

69. J. M. Fitzpatrick, P. E. Konrad, C. Nickele*, E. Cetinkaya*, C. Kao, “Accuracy of customized miniature stereotactic platforms”, Stereotactic and Functional Neurosurgery , 83 , 25-31 (April 2005). PMID: 11585208

70. R. F. Labadie , R. J. Shah*, S. S. Harris, E. Cetinkaya*, D. S. Haynes, M. Fenlon, S. Juscyzk S, R. L. Galloway, J. M. Fitzpatrick, “In vitro assessment of image-guided otologic surgery: submillimeter accuracy within the temporal bone”. Otolaryngol. Head Neck Surg., 132 ; 435-42 (March 2005). PMID: 15746858

71. R. F. Labadie, P. Choudhury*, E. Cetinkaya*, R. Balachandran*, D. S. Haynes, M. Fenlon, S. Juscyzk, J. M. Fitzpatrick, “Minimally-invasive, image-guided, facial-recess approach to the middle ear: demonstration of the concept of percutaneous cochlear access in vitro”, Otology and Neurotology, 26 , 557-562 (July 2005).

72. R. F. Labadie, B. M. Davis, J. M. Fitzpatrick, “Image Guided Surgery–What is the Accuracy?”, Current Opinion in Otolaryngology and Head and Neck Surg., 13 , 27-31 (2005).

73. F. M. Warren, R. Balachandran*, J. M. Fitzpatrick, R. F. Labadie, “Percutaneous cochlear access using bone-mounted, customized drill guides: demonstration of concept in vitro”, Otology and Neurotology , 28 (3), 325-329 (Apr 2007).

74. N. Xu*, J. M. Fitzpatrick, B. M. Dawant, D. R. Pickens, V. L. Morgan, “Computer-generated fMRI phantoms with motion-distortion interaction“, Magnetic Resonance Imaging, 25 (10), 1376-1384 (2007).

75. R. F. Labadie, O. Majdani, J. M. Fitzpatrick, “Image-guided technique in neurotology”, Otolaryngology Clinics of N. Amer ., 40 (3), 611-24 (Jun 2007).

76. Y. Li*, N. Xu*, J. M. Fitzpatrick, V. L. Morgan, D. R. Pickens, B. M. Dawant, “Accounting for signal loss due to dephasing in the correction of distortions

in gradient-echo EPI via nonrigid registration”, IEEE Transactions on Medical Imaging , 26 (12), 1698-1707 (Dec 2007).

77. D. Skerl, B. Likar, J. M. Fitzpatrick, F. Pernus, “Comparative evaluation of similarity measures for rigid registration of multi-modal head images”, Physics in Medicine and Biology , 52 (18), 5587-5601 (2007).

78. R. F. Labadie, J. H. Noble*, B. M. Dawant, Ramya Balachandran, Omid Majdani, J. M. Fitzpatrick, “Clinical Validation of percutaneous cochlear implant surgery: Initial report”, The Laryngoscope , 118 (6), 1031-1039 (June 2008). PMID: 18401279

79. Y. Li*, N. Xu*, J. M. Fitzpatrick, V. L. Morgan, D. R. Pickens, B. M. Dawant, “Geometric distortion correction for echo planar images using nonrigid registration with spatially varying scale”, Magnetic Resonance Imaging, 26 (10), 1388-1397 (December 2008).

80. R. Balachandran, J. M. Fitzpatrick, R. F. Labadie. Accuracy of Image-guided Surgical Systems at the Lateral Skull Base as Clinically Assessed Using Bone-Anchored Hearing Aid Posts as Surgical Targets, Otology and Neurotology , 29 (8), 1050-5, (December 2008). PMID: 18836389

81. R. Balachandran*, J. Mitchell, B. M. Dawant, J. M. Fitzpatrick, “Accuracy evaluation of MicroTargeting™ platforms for deep-brain stimulation using virtual targets”, Transactions on Biomedical Engineering , 56 (1), 37-44, (January 2009). PMID: 19224717

82. R. F. Labadie, J. Mitchell, R. Balachandran, and J. M. Fitzpatrick, “Customized, rapid-production microstereotactic table for surgical targeting: description of concept and in vitro validation”, Int. J. Comput. Assist. Radiol. Surg. , 4 (3), 273-280 (May 2009). PMID: 20033593

83. R. F. Labadie, R Balachandran, J Mitchell, J. H. Noble, O Majdani, B. M. Dawant, M Bennett, D. S. Haynes, J. M. Fitzpatrick, “Clinical validation study of percutaneous cochlear access using patient customized micro-stereotactic frames,” Otology and Neurotology , 31 (1), 94-99 (January 2010). PMID: 20019561

84. J. M. Fitzpatrick, “The role of registration in accurate surgical guidance”, Journal of Engineering in Medicine , 224 (5), 607-622 (May 2010).

85. J. H. Noble, O. Majdani, R. F. Labadie, B. Dawant, J. M. Fitzpatrick, “Automatic determination of optimal linear drilling trajectories for cochlear access accounting for drill-positioning error,” J. Medical Robotics and Comp. Asst. Surg. 6(3): 281-290 (May 2010). 20812268

86. P. D’Haese, S. Pallavaram, P. E. Konrad, J. Neimat, J. M. Fitzpatrick, B. M. Dawant, “Clinical accuracy of a customized stereotactic platform for deep-brain stimulation after accounting for brain shift”, Stereotactic and Functional Neurosurgery 88 (2), 81- 87 (January 2010). PMID: 20068383

87. R. Balachandran, E. B. Welch, Benoit M. Dawant, J. M. Fitzpatrick, “Effect of MR Distortion on Targeting for Deep-Brain Stimulation”, IEEE Trans. Biomed. Eng. , 57 (7), 1729-1735 (July 2010). PMID: 20388592

88. R. Balachandran, J. E. Mitchell, G. Blachon, J. H. Noble, B. M. Dawant, J. M. Fitzpatrick, R. F. Labadie, “Percutaneous cochlear implant drilling via customized frames: An in vitro study”, Otolaryngology—Head and Neck Surgery 142 (3), 421-426 (March 2010). PMID: 20172392

89. J. Mitchell, R. F. Labadie, J. M. Fitzpatrick, “Design of a novel device to provide assured seating of bone implanted fiducial markers”, Journal of Medical Devices 4 (2), 025002:1-4 (June 2010).

A. Danilchenko*, R. Balachandran, J. L. Toennies, S. Baron, B. Munske, J. M. Fitzpatrick, T. J. Withrow, R. J. Webster III, R. F. Labadie, “Robotic Mastoidectomy”, Otology and Neurotology 32 (1), 11-16 (January 2011). PMID: 21042227

Danilchenko* and J.M. Fitzpatrick, “General approach to first-order error prediction in rigid point registration”, IEEE Transactions on Medical Imaging 30 (3), 679-693 (March 2011). PMID: 21075718

90. R. F. Labadie and J. M. Fitzpatrick, “Can otolaryngology compete with larger fields regarding impact factor? Is percentile-based impact factor a solution?”, Otolaryngology-Head and Neck Surgery , 145 (1), 15-17 (Jul 2011).

91. L. Maier-Hein, A. M. Franz, T. R. dos Santos, M. Schmidt, M. Fangerau, H.-P. Meinzer, and J. M. Fitzpatrick, “Convergent Iterative Closest-Point Algorithm to Accommodate Anisotropic and Inhomogeneous Localization Error ”, IEEE Trans. Patt. Anal. Mach. Intell. , 34(8), 1520-32 (Aug 2012). PMID: 22184256

92. T. R. McRackan, R. Balachandran, G. S. Blachon, J. E. Mitchell, J. H. Noble, C. G. Wright, J. M. Fitzpatrick, B. M. Dawant, R. F. Labadie, “Validation of Minimally-Invasive, Image-guided Cochlear Implantation Using Advanced Bionics, Cochlear, and Medel Electrodes in a Cadaver Model”, Intnl. J. Comput. Assisted Radiol. and Surg. (April 2013). PMID: 23633113

93. J. Burgner, A.L. Simpson, J.M. Fitzpatrick, R.A. Lathrop, S.D. Herrell, M.I. Miga, R.J. Webster III, “A study on the theoretical and practical accuracy of conoscopic holography-based surface measurements: toward image registration in minimally invasive surgery”, Intnl. J. Medical Robotics and Comput. Assisted Surg. 9:2, 190-203 (Jun 2013). PMID: 22761086

94. R. Balachandran, M. A. Fritz, M. S. Dietrich, A. Danilchenko, J. E. Mitchell, V. L. Oldfield, W. W. Lipscomb, J. M. Fitzpatrick, J. S. Neimat, P. E. Konrad, R. F. Labadie, “Clinical testing of an alternate method of inserting bone-implanted fiducial markers”, Epub ahead of print (2014). PMID: 24493228

95. R. Balachandran, F. A. Reda, J. H. Noble, G. S. Blachon, B. M. Dawant, J. M. Fitzpatrick, R. F. Labadie, “Minimally invasive image-guided cochlear implantation for pediatric patients: clinical feasibility study”, Otolaryngology—Head and Neck

Surgery , 150 : 631, online publication Jan 21, 2014, (April, 2014). DOI: 10.1177/0194599813519050

96. R. F. Labadie, R. Balachandran, J. H. Noble, G. S. Blachon, J. E. Mitchell, F. A. Reda, B. M. Dawant, J. M. Fitzpatrick, “Minimally invasive cochlear implantation surgery: First report of clinical implementation”, Laryngoscope (August 2014).

Conference Proceedings

97. J. M. Fitzpatrick, J. J. Grefenstette, and D. Van-Gucht*, “Image registration by genetic search,” Proceedings of Southeastcon 84, Louisville, KY, 460–464 (Apr 1984).

98. J. M. Fitzpatrick, “A Method for calculating velocity in time dependent images based on the continuity equation,” Proc. IEEE Computer Vision and Pattern Recognition, San Francisco, CA, 78–81 (Jun 1985).

99. J. J. Grefenstette and J. M. Fitzpatrick, “Genetic search with approximate function evaluations,” Proc. Intl. Conf. on Genetic Algorithms and their Applications, Pittsburg, PA, 112–120 (Jul 1985).

100.D. R. Pickens, J. M. Fitzpatrick, J. J. Grefenstette, R. R. Price, and A. E. James, “A technique for automatic motion correction in DSA,” Proc. Medicine XIV and PACS IV, Newport Beach, CA, 268–274 (Feb 1986).

101.J. M. Fitzpatrick, J. J. Grefenstette, D. R. Pickens, M. Mazer, and J. R. Perry, “A system for image registration in digital subtraction angiography,” Tenth International Conference on Information Processing in Medical Imaging, Utrecht, The Netherlands, Jun 1987, eds. C. N. deGraaf and M. A. Viergever, Plenum Press, N.Y., 415–436 (1988).

102.J. M. Fitzpatrick, D. R. Pickens, V. R. Mandava*, and J. J. Grefenstette “The reduction of motion artifacts in digital subtraction angiography by

geometrical image transformation”, Proc. SPIE Medical Imaging II, Newport Beach, CA 379–386 (Feb 1988).

103.D. R. Pickens and J.M. Fitzpatrick, “Phantom design for evaluation of a three-dimensional motion correction algorithm in digital subtraction angiography”, Proc. SPIE Medical Imaging II, Newport Beach, CA, 707–714 (Feb 1988).

104.H. Chang* and J. M. Fitzpatrick, “Displaytool: an image display utility for Sun-3 workstations”, Proc. SPIE Medical Imaging II, Newport Beach, CA, 1210–1217 (Feb 1988).

105.J. M. Fitzpatrick and C. A. Pedersen*, “A method for calculating fluid flow in time dependent density images”, Proc. Conf. Electronic Imaging, Anaheim, CA, 347–352 (Mar 1988).

106.V. R. Mandava* and J. M. Fitzpatrick, “Simulated annealing for motion correction in digital subtraction angiography”, Proc. 10th Annu. Int. Conf. IEEE Eng. Med. Biol. Soc., New Orleans, LA, 435–436 (Nov 1988).

107.J. M. Fitzpatrick, D. R. Pickens, J. M. Perry, and Y. Ge*, “Experimental results of image registration in digital subtraction angiography with an in vivo phantom”, Proc. SPIE Medical Imaging III, Newport Beach, CA, 200–213 (Feb 1989).

108.J. M. Fitzpatrick, D. R. Pickens, H. Chang*, Y. Ge*, and M. Ozkan*, “Geometrical transformations of density images”, The Internl. Congress on Optical Science and Engineering, SPIE vol. 1137, Paris, France, 12–21 (Apr 1989).

109.M. Ozkan*, J. M. Fitzpatrick, and K. Kawamura, “Image registration for a Transputer based distributed system”, Proc. Second Int. Conf. on Indust. & Eng. Appl. of AI & Expert Systems, Tullahoma, TN, 908–915 (Jun 1989).

110.H. Chang* and J. M. Fitzpatrick, “Geometrical image transformations to compensate for MRI distortions”, Proc. SPIE Medical Imaging IV, Newport Beach, CA, 116–127 (Feb 1990).

111.V. R. Mandava*, R. J. Maciunas, J. M. Fitzpatrick, R. L. Galloway, and C. R. Maurer*, “A workstation platform for stereotactic neurosurgical planning”, Proc. 13th Annu. Int. Conf. IEEE Eng. Med. Biol. Soc., Orlando, FL, 1220–1221 (Nov 1991).

112.V. R. Mandava*, J. M. Fitzpatrick, C. R. Maurer*, R. J. Maciunas, and G. S. Allen, “Registration of multimodal volume head images via attached markers”, Proc. SPIE Medical Imaging VI, Newport Beach, CA, Vol. 1652, 271–282 (Feb 1992).

113.Y. Ge*, J. Votaw, J. M. Fitzpatrick, R. M. Kessler, R. J. Maciunas, and R. A. Margolin, “Reformatting PET images by direct fitting of the proportional grid system: implementation and validation”, Proc. SPIE Medical Imaging VI, Newport Beach, CA, 397–408 (Feb 1992).

114.S. Dong*, J. M. Fitzpatrick, and R. J. Maciunas, “Rectification of distortion in MRI for stereotaxy”, Proc. Fifth Computer-Based Medical Systems Symposium, Durham, NC, 181–189 (Jun 1992).

115.R. Maurer*, Jr., J. J. McCrory, J. M. Fitzpatrick, “Estimation of accuracy in localizing externally attached markers in multimodal volume head images”, Proc. SPIE Medical Imaging VII, Newport Beach, CA, 43–54 (Feb 1993).

116.Y. Ge*, J. M. Fitzpatrick, J. Bao*, B. M. Dawant, R. M. Kessler, R. A. Margolin, “A new method for identifying cortical convolutions in MR brain images”, Proc. SPIE Medical Imaging 94, Newport Beach, CA, 484–493 (Feb 1994).

117.R. Maurer*, Jr., G. B. Aboutanos*, B. M. Dawant, S. Gadamsetty*, R. A. Margolin, R. J. Maciunas, and J. M. Fitzpatrick, “Effect of geometrical distortion correction in MR on image registration accuracy”, Proc. SPIE Medical Imaging 94, Newport Beach, CA, 200–213 (Feb 1994).

118.M. Y. Wang*, J. M. Fitzpatrick, C. R. Maurer*, Jr., R. J. Maciunas, “An automatic technique for localizing externally attached markers in MR AND

CT volume images of the head”, Proc. SPIE Medical Imaging 94, Newport Beach, CA, 214–224 (Feb 1994).

119.Y. Ge*, J. M. Fitzpatrick, R. M. Kessler, M. Jeske-Janicka, R. A. Margolin, “Intersubject brain image registration using both cortical and subcortical landmarks”, Proc. SPIE Medical Imaging 95, San Diego, CA, 81–95 (Feb 1995)

120.R. Maurer*, Jr., G. B. Aboutanos*, B. M. Dawant, R. A. Margolin, R. J. Maciunas, J. M. Fitzpatrick, “Registration of CT and MR brain images using a combination of points and surfaces”, Proc. SPIE Medical Imaging 95, San Diego, CA, 109–123 (Feb 1995).

121.M. Y. Wang*, J. M. Fitzpatrick, C. R. Maurer*, Jr., “Design of fiducials for accurate registration of CT and MR volume images”, Proc. SPIE Medical Imaging 95, San Diego, CA, 96–108 (Feb 1995)

122.R. J. Maciunas, J. M. Fitzpatrick, S. Gadamsetty*, C. R. Maurer*, “A universal method for geometrical correction of magnetic resonance images for stereotactic neurosurgery”, Proc. Amer. Soc. Stereotactic and Functional Neurosurgery, (Mar 1995)

123.C. R. Maurer*, Jr., J. M. Fitzpatrick, R. L. Galloway, Jr., M. Y. Wang*, R. J. Maciunas G. S. Allen, “The accuracy of image-guided neurosurgery using implantable fiducial markers”, Proc. Computer Assisted Radiology 9th Intl. Symposium and Exhibition, Berlin, ed. H. U. Lemke, K. Inamura, C. C. Jaffe, M. W. Vannier, Springer-Verlag, Berlin, 1997–1202 (Jun 1995).

124.J. West*, J. M. Fitzpatrick, M. Y. Wang*, B. M. Dawant, C. R. Maurer*, Jr., R. M. Kessler, R. J. Maciunas, et al., “Comparison and evaluation of retrospective intermodality image registration techniques”, Proc. SPIE Medical Imaging 96, Newport Beach, CA, vol. 2710, 332–347 (Feb 1996).

125.Y. Ge*, C. R. Maurer*, Jr., J. M. Fitzpatrick, “Surface-based 3-D image registration using the iterative closest point algorithm with a closest point transform”, Proc. SPIE Medical Imaging 96, Newport Beach, CA, vol. 2710, 358–367 (Feb 1996).

126.M. Y. Wang*, J. M. Fitzpatrick, C. R. Maurer*, Jr, “Partial volume effect on marker localization in medical density images”, Proc. SPIE Medical Imaging 97, Newport Beach, CA, vol. 3034, 580–591 (Feb 1997).

127.C. R. Maurer*, Jr., J. M. Fitzpatrick, M. Y. Wang*, R. L. Galloway, Jr., R. J. Maciunas, G. S. Allen, “Registration of head volume images using

implantable fiducial markers”, Proc. SPIE Medical Imaging 97, Newport Beach, CA, vol. 3034, 561–579 (Feb 1997).

128.J. West*, J. M. Fitzpatrick, M. Y. Wang*, B. M. Dawant, C. R. Maurer*, Jr., R. M. Kessler, R. J. Maciunas, “Retrospective intermodality registration techniques: surface based versus volume-based”, Joint Conference of Computer Vision, Virtual Reality, and Robotics in Medicine and Medical Robotics and Computer Assisted Surgery, Grenoble, France, 151–160 (Mar 1997).

129.L. G. Hill, C. R. Maurer*, Jr., M. Y. Wang*, R. J. Maciunas, J. A Barwise, J. M. Fitzpatrick, “Estimation of intraoperative brain surface movement”, Proc. Joint Conference of Computer Vision, Virtual Reality, and Robotics in Medicine and Medical Robotics and Computer Assisted Surgery, Grenoble, France, 449–458 (Mar 1997).

130.D. L. G. Hill, C. R. Maurer*, Jr., C. Studholme, J. M. Fitzpatrick, D. J. Hawkes, “Determining scaling errors in radiological images using a nine degree of freedom registration algorithm”, Proc. Medical Image Understanding and Analysis 1997, ed. Taylor, C. J., Noble, J. A., and Brady, J. M., BMVA Press, 41–44 (Jul 1997).

131.J. M. Fitzpatrick, J. B. West*, C. R. Maurer*, Jr., “Derivation of expected registration error for rigid-body, point-based, image registration”, Proc. SPIE Medical Imaging 98: Image Processing (Feb 1998), ed. Kenneth M. Hanson, San Diego, CA, vol. 3338, 16–27 (June 24, 1998). doi:10.1117/12.310824

132.C. R. Maurer*, Jr., R. J. Maciunas, J. M. Fitzpatrick, “Registration of head CT images to physical space using multiple geometrical features”, Proc. SPIE Medical Imaging 98, San Diego, CA, vol. 3338, 72–80 (Feb 1998).

133.J. M. Fitzpatrick, Jay B. West*, “A blinded evaluation and comparison of image registration methods”, Proc. Workshop on Empirical Evaluation Techniques in Computer Vision, University of California at Santa Barbara, IEEE Computer Society Press, Los Alimitos, CA, 12–27 (Jul 1998).

134.C. R. Maurer*, Jr., D. Hill, R. J. Maciunas, J. Barwise, J. M. Fitzpatrick, M. Wang*, “Measurement of intraoperative brain surface deformation under a craniotomy”, Medical Image Computing and Computer-Assisted Intervention, Cambridge, MA, 51–62 (Oct 1998).

135.J. B. West* and J. M. Fitzpatrick, “The distribution of target registration error in rigid-body, point-based registration”, Sixteenth International Conference on Information Processing in Medical Imaging, Visegrad, Hungary, June 28–July2, 1999, eds. A.

Kuba, M. Samal, and A. Todd-Pokropek, Springer-Verlag, 460–465 (July 1999).

136.J. B. West*, J. M. Fitzpatrick, “Point-based, rigid registration: clinical validation of theory”, Proc. SPIE Medical Imaging 2000, San Diego, CA, vol. 3979, 353–359 (Feb 2000).

137.P. G. Batchelor and J. M. Fitzpatrick, “A study of the anisotropically weighted Procrustes problem”, IEEE Workshop on Mathematical Methods in Biomedical Image Analysis, Hilton Head, SC (Jun 2000).

138.J. B. West*, J. M. Fitzpatrick, and P. G. Batchelor, “Point-based registration under a similarity transform”, Proc. SPIE Medical Imaging 2001, San Diego, CA, vol. 4322, 611–622 (Feb 2001).

139.D. Skerl, S. Pan, R. Li, J. M. Fitzpatrick, M. H. Parks, P. R. Martin, V. L. Morgan, and B. M. Dawant, “Correction of geometric distortions in EP images using non-rigid registration to corresponding anatomic images”, Proc. SPIE Medical Imaging 2001, San Diego, CA, vol. 4322, 53–68 (Feb 2001).

140.D. A. Yoder*, E. Changchien*, C. B. Paschal, and J. M. Fitzpatrick, “MRI simulator with static-field inhomogeneity”, Proc. SPIE Medical Imaging 2002, San Diego, CA, vol. 4684, 592–603 (Feb 2002)

141.P. Jannin, N. Ayache, J. M. Fitzpatrick, R. Shahidi, M. W. Vannier, and D. Hawkes, “White paper: Validation of medical image processing in the context of Image-guided therapy”, Special Session on Validation of Medical Image Processing in the Context of Image-Guided Therapy, 6th Ann. Conf. of Intnl. Society for Computer Aided Surgery, Paris (Jun 2002).

142.P. G. Batchelor, J. B. West*, J. M. Fitzpatrick, “Scalings and similarity transforms: maximum likelihood estimations”, Proc. of Medical Image Understanding and Analysis 2002 (MIUA 2002), ed. A. Houstin and R. Zwiggelaar, University of Portsmouth, Cosham, UK, July 2002, 129–132 (Jul 2002)

143.C. Nickele*, E. Cetinkaya*, J. M. Fitzpatrick, P. E. Konrad, “Evaluation of a method for placing deep-brain stimulators”, Proc. SPIE Medical Imaging 2003, San Diego, CA, vol. 5029, 763–772 (Feb 2003).

144.X. Liu*, H. Cevikalp*, J. M. Fitzpatrick, “Marker orientation in fiducial registration”, Proc. SPIE Medical Imaging 2003 , San Diego, CA, vol. 5032, 1176–1185 (Feb 2003).

145.Z. Cao, S. Pan, R. Li, R. Balachandran*, J. M. Fitzpatrick, W. C. Chapman, B. M. Dawant, “Registration of medical images using an interpolated closest point transform method and

validation”, Proc. SPIE Medical Imaging 2003, San Diego, CA, vol. 5032, 325–333 (Feb 2003).

146.R. Labadie, M. Fenlon, H. Cevikalp*, S. Harris, R. Galloway, J.M. Fitzpatrick, “Image guided otologic surgery”, Proc. 17th Intnl. Congress and Exhibition, Computer Assisted Radiology and Surgery, London, H.U. Lemke, et al, ed., Elsevier, Intnt. Congress Series 1256, 613–618 (Jun 2003).

147.B. M. Dawant, R. Li, E. Cetinkaya, C. Kao, J. M. Fitzpatrick, P. E. Konrad, “Computerized atlas-guided positioning of deep brain stimulators: a feasibility study”, Proc. 2nd Intl. Workshop on Biomedical Image Registration, Philadelphia, J.C. Gee, J.B. Maintz, and M.W. Vannier, ed., Lecture Notes in Computer Science (LNCS) vol. 2717, 142-150 (Jun, 2003).

148.W. C. Lavely, C. Scarfone, A. J. Cmelak, W. H. Martin, J. M. Fitzpatrick, R. R. Price, D. E. Hallahan, “An Assessment of Accuracy and Determination of Target Volumes for Radiotherapy Treatment Planning in CT-PET Fusion Images of Patients with Head and Neck Cancer”, 2nd Ann. Mtg. Soc. for Molecular Imaging, San Francisco, (Aug 2003).

149.R. F. Labadie, R. J. Shah, S. S. Harris, E. Cetinkaya*, D. S. Haynes, M. Fenlon, S. Juscyzk, R. L. Galloway, J. M. Fitzpatrick. “Image-guided otologic surgery: submillimeter accuracy within the temporal bone”, Ann. Mtg. Am. Academy of Otolaryngology-Head and Neck Surgery, Orlando, FL (Sep 2003).

150.R. F. Labadie, P. Choudhury*, E. Cetinkaya*, R. Balachandran*, D. S. Haynes, M. Fenlon, S. Juscyzk, J. M. Fitzpatrick, “Minimally-invasive, image-guided, facial-recess approach to the middle ear”, Mtg. of Am. Otological Soc., Phoenix, AZ (May 2004).

151.N. Xu*, D. A. Yoder*, J. M. Fitzpatrick, and C. B. Paschal, “Compensating for MR Distortion Caused by Marker Susceptibility in MR Images”, SPIE Medical Imaging 2004, San Diego, CA, vol. 5370, 1244–1253 (Feb 2004).

152.P. D’Haese, E. Cetinkaya*, C. Kao, J. M. Fitzpatrick, P. E. Konrad, and B. M. Dawant, “Toward the Creation of an Electrophysiological Atlas for the Pre-operative Planning and Intra-operative Guidance of Deep Brain Stimulators (DBS) Implantation”, 7th Intl. Conf. on Medical Image Computing and Computer-Assisted Intervention, Saint-Malo, France, Lecture Notes in Computer Science, 3216, Springer (September 2004).

153.J. M. Fitzpatrick, R. Balachandran*, and R. F. Labadie, “Bite-Block Relocation Error in Image-

Guided Otologic Surgery”, 7th Intl. Conf. on Medical Image Computing and Computer-Assisted Intervention, Saint-Malo, France, Springer Lecture Notes in Computer Science, 3217 , 518-525, (September 2004).

154.R. Balachandran*, J. M. Fitzpatrick, and R. F. Labadie, “Fiducial registration for tracking systems that employ coordinate reference frames”, Proc. SPIE Medical Imaging 2005 , San Diego, CA, vol. 5744, 134–145 (Feb 2005).

155.N. Xu*, Y. Li*, C. B. Paschal, J. C. Gatenby, V. L. Morgan, D. R. Pickens, B. M. Dawant, J. M. Fitzpatrick, "Simulation of Susceptibility-Induced Distortions in fMRI", Proc. Medical Imaging 2006 , San Diego, CA (Feb 2006).

156. Y. Li*, N. Xu*, J. M. Fitzpatrick, V. L. Morgan, D. R. Pickens, B. M. Dawant, "Physics-based Constraints for Correction of Geometric Distortions in Gradient Echo EP images via Nonrigid Registration”, Proc. Medical Imaging 2006, San Diego, CA (Feb 2006).

157. R Balachandran*, R. F. Labadie, J. M. Fitzpatrick, “Validation of a fiducial frame system for image-guided otologic surgery utilizing BAHA® bone screws”, IEEE Intnl. Symp. Biomedical Imaging 2006 , Arlington, VA (Apr 2006).

158.R. Balachandran*, R. F. Labadie, J. M. Fitzpatrick, “Clinical Determination of Target Registration Error of an Image-Guided Otologic Surgical System using Patients with Bone-Anchored Hearing Aids”, Proc. Medical Imaging 2007 , San Diego, CA, SPIE 6509- 107 , 650930 (Feb 2007).

159.H. Al-Marzouqi, J. Noble*, F. Warren, R. F. Labadie, J. M. Fitzpatrick, B. M. Dawant, “Planning a safe drilling path for cochlear implantation surgery using image registration techniques”, Proc. Medical Imaging 2007 , San Diego, CA, SPIE 6509-110 , 650933, 331-339, (Feb 2007).

160.J. H. Noble*, F. M. Warren, R. F. Labadie, B. Dawant, J. M. Fitzpatrick, “Determination of drill paths for percutaneous cochlear access accounting for target positioning error”, Proc. Medical Imaging 2007 , San Diego, CA, SPIE 6509-76 , 650925 (Feb 2007).

161.N. Xu*, J. M. Fitzpatrick, “Dynamic field mapping and distortion correction for fMRI”, Proc. Medical Imaging 2007 , San Diego, CA, SPIE, 6512-57 , 65121M (Feb 2007).

162.H. Al-Marzouqi, J. H. Noble*, F. M. Warren, R. F. Labadie, J. M. Fitzpatrick, B. Dawant, “Using CT images to locate a safe drilling path for cochlear implantation surgery”, 2nd Internat, Conf. On Modeling, Simulation and Applied Optimization, AbuDhabi, UAE (Mar 2007).

163.R. Balachandran*, J. Mitchell, B. Dawant, J. M. Fitzpatrick, “Evaluation of targeting frames for deep-brain stimulation using virtual targets”, Proc. IEEE Intnl. Symp. Biomedical Imaging 2007 , Arlington, VA, 1184-1187 (Apr 2007).

164.R. Balachandran*, J. M. Fitzpatrick, “The distribution of registration error of a fiducial marker in rigid-body point-based registration”, Proc. Medical Imaging 2008 , San Diego, CA, SPIE 6918- 21 , 69180M (Feb 2008).

165.J. M. Fitzpatrick, “Fiducial registration error and target registration error are uncorrelated”, SPIE Medical Imaging 2009 , Lake Buena Vista, FL, SPIE 7261-1 , 726102, (Feb 2009).

166.C. C. Heath*, R. Balachandran , O. Majdani, A. Jurik, T. Edwards, R. F. Labadie, J. M. Fitzpatrick, “Disablement of a surgical drill via CT guidance to protect vital anatomy”, SPIE Medical Imaging 2009 , Lake Buena Vista, FL, SPIE 7261-22 , 72610N (Feb 2009).

167.R. Balachandran, J. M. Fitzpatrick, “Iterative solution for rigid-body point-based registration with anisotropic weighting”, SPIE Medical Imaging 2009 , Lake Buena Vista, FL, SPIE 7261-121 , 72613D (Feb 2009).

168.Danilchenko*, J. M. Fitzpatrick, “General approach to error prediction in point registration”, SPIE Medical Imaging 2010 , February 2010, San Diego, CA, SPIE 7625-14 , 76250F (April 2010). DOI: 10.1117/12.843847

169.Danilchenko*, A. D. Wiles, R. Balachandran, J. M. Fitzpatrick, “Improved method for point-based tracking”, 13th Intl. Conf. on Medical Image Computing and Computer-Assisted Intervention , September 20-24, 2010, Beijing, China, Lecture Notes in Computer Science (LNCS) 6363 , 587-594 (2010). DOI: 10.1007/978 3-642-15711-90

170.L. Maier-Hein, M. Schmidt, A. M. Franz, T. R. dos Santos, A. Seitel, B. Jähne, J. M. Fitzpatrick, H. P. Meinzer, “Accounting for anisotropic noise in fine registration of time-of-flight range data with high-resolution surface data”, 13th Intl. Conf. on Medical Image Computing and Computer-Assisted Intervention , September 20-24, 2010, Beijing, China, Lecture Notes in Computer Science (LNCS) 6361 , 251-258 (2010). DOI: 10.1007/978 3-642- 15705-9

171.R. Balachandran, D. Schurzig, J. M. Fitzpatrick, R. F. Labadie, “The Role of Portable CT Scanners in Image-Guided Surgery”, Proc. 24th Intnl. Congress and Exhibition, Computer Assisted Radiology and Surgery, June 23-26, Geneva, H.U. Lemke, et al, ed., (Jun 2010).

172.Balachandran R, Mitchell JE, Noble J, Blachon G, Lipscomb WW, Schurzig D, Haynes DS, Bennett ML, Majdani O, Dawant BM, Fitzpatrick JM, Labadie RF. “Percutaneous Cochlear Implantation via Image-Guided Customized Frames.” Robotics Science and Systems 2010: Workshop on Enabling Technologies for Image-Guided Robotic Interventional Procedures, Zaragoza, Spain (2010).

173.L. Maier-Hein, T. R. dos Santos, M. Schmidt, A. M. Franz, H. P. Meinzer, J. M. Fitzpatrick, “Iterative closest point algorithm with anisotropic weighting and its application to fine surface registration”, SPIE Medical Imaging 2011, Lake Buena Vista, FL, SPIE 7962-31 ,79620W (Feb 2011).

174.R. Balachandran, J. E. Mitchell, J. Noble, D. Schurzig, G. Blachon, T. R. McRackan, R. J. Webster, B. M. Dawant, J. M. Fitzpatrick, R. F. Labadie, “Insertion of electrode array using percutaneous cochlear implantation technique: a cadaveric study”, SPIE Medical Imaging 2011, Lake Buena Vista, FL, SPIE 7964-49 , 79641E (Feb 2011).

175.J. M. Fitzpatrick, “Error prediction for probes guided by means of fixtures”, SPIE Medical Imaging 2012, San Diego, CA, SPIE 8316-07 (Feb 2012).

176.L. A. Kahrs, G. S. Blachon, R. Balachandran, J. M. Fitzpatrick, R. F. Labadie, “Measurement of distances between anatomical structures using a translating stage with mounted endoscope”, SPIE Medical Imaging 2012, San Diego, CA, SPIE 8316-32 (Feb 2012).

177.L. B. Kratchman, J. M. Fitzpatrick, “Robotically-adjustable microstereotactic frames for image-guided neurosurgery”, SPIE Medical Imaging 2013, Lake Buena Vista, FL, SPIE 8671(Feb 2013). DOI: 10.1117/12.2008172

178.J. M. Fitzpatrick, “Rigid Point Registration Circuits”, SPIE Medical Imaging 2014, San Diego, CA, SPIE 9036-97 (February 2014).

179.N. P. Dillon, R. Balachandran, A. M. dit Falisse, G. B. Wanna, R. F. Labadie, T. J. Withrow, J. M. Fitzpatrick, R J. Webster, “Preliminary Testing of a Compact, Bone-Attached Robot for Otologic Surgery”, SPIE Medical Imaging 2014, San Diego, CA, SPIE 9036-40 (February 2014).

180.J. Kobler, J. Díaz, J. M. Fitzpatrick, G. J. Lexow, O. Majdani, T. Ortmaier, “Localization accuracy of sphere fiducials in computed tomography images”, SPIE Medical Imaging 2014, San Diego, CA, SPIE 9036-35 (February 2014).

181.M. A. Siebold, N. P. Dillon, R. J. Webster, and J. M. Fitzpatrick, “Incorporating Target Registration Error Into Robotic Bone Milling”, SPIE Medical Imaging 2015, Orlando, FL, SPIE (February 2015).

Abstracts

182.J. M. Fitzpatrick and E. A. Desloge, “Nonequilibrium gas reaction kinetics by the method of moments,” Bull. Am. Physical Soc. 18, 268 (Feb 1973).

183.Shizgal and J. M. Fitzpatrick, “Nonequilibrium rate calculations for systems in which one reactant is common to two reactions,” Bull. Am. Physical Soc. 22, 1254 (Nov 1977).

184.J. M. Fitzpatrick and J. J. Grefenstette, “A technique for reducing motion artifacts in digital subtraction angiography,” Proc. Radiological Soc. of N. Amer., Washington, DC, 318 (Nov 1984).

185.D. R. Pickens, J. M. Fitzpatrick, J. J. Grefenstette, R. R. Price, and A. E. James, “A technique for automatic motion correction in digital subtraction angiography”, Proc. Radiological Soc. of N. Amer., Chicago, IL (Nov 1986).

186.J. M. Fitzpatrick and D. R. Pickens, “An image registration system for digital subtraction angiography”, Proc. Radiological Soc. of N. Amer., Chicago, IL (Nov 1987).

187.D. R. Pickens, J. M. Fitzpatrick, V. Mandava*, and J. J. Grefenstette, “Description of a three-dimensional motion correction algorithm for digital subtraction angiography”, World Congress on Medical Physics and Biomedical Engineering, San Antonio, TX (Aug 1988).

188.R. Maciunas, J. Netterville, M. Schwaber, V. Mandava*, and J. M. Fitzpatrick, “Computerized three dimensional analysis of anterior cranial base lesions”, Intl. Symposium on Cranial Based Surgery, Pittsburg, PA (Sep 1988).

189.J. M. Fitzpatrick, M. Mazer, J. M. Perry, and D. R. Pickens, “Improvement of digital angiography of coronary arteries”, Devices and Technology Branch Contractors’ Meeting, Natl. Heart, Lung, and Blood Institute, Bethesda, MD (Dec 1988).

190.M. Dawant, H. G. Sprenkels*, D. B. Puffer*, J.M. Fitzpatrick, and R. R. Price, “Combining perfusion-diffusion, T1-weighted, T2-weighted, and proton density-weighted images for tissue characterization”, Book of Abstracts of 1st Ann. Mtg. Soc. of Magnetic Resonance in Med., Amsterdam, The Netherlands (Aug 1989).

191.J. M. Fitzpatrick, H. Chang*, M. R. Willcott, and R. R. Price, “A technique for improving accuracy in position and intensity within images acquired in the presence of field inhomogeneity”, Book of Abstracts of 1st Ann. Mtg. Soc. of Magnetic Resonance in Med., New York, NY, 426 (Aug 1990).

192.R. J. Maciunas, R. L Galloway, J. M. Fitzpatrick, V. R. Mandava*, and G. S. Allen, “A universal intraoperative surveying device for interactive neurosurgical localization”, Proc. Congress of Neurological Surgeons, Los Angeles, CA, p. 122 (Sep 1990).

193.R. J. Maciunas, R. J. Galloway, V. R. Mandava*, C. Edwards*, J. M. Fitzpatrick, and G. S. Allen, “A universal system for interactive image-guided cranial base surgery”, Proc. N. Amer. Skull Base Soc., Orlando, FL (Feb 1991). [Abstracts 193, 194, and 195 are substantially the same.]

194.R. J. Maciunas, R. J. Galloway, C. Edwards, V. R. Mandava*, J. M. Fitzpatrick, and G. S. Allen, “A universal system for interactive image-guided neurosurgery”, Proc. Ann. Mtg. Am. Assoc. Neurological Surgeons, p. 558 (Apr 1991). [Abstracts 193, 194, and 195 are substantially the same.]

195.R. J. Maciunas, R. L. Galloway, J. M. Fitzpatrick, V. R. Mandava*, C. E. Edwards*, and G. S. Allen, “A universal system for interactive image-directed neurosurgery”, Proc. Amer. Soc. Stereotactic and Functional Neurosurgery, (June 1991). [Abstracts 193, 194, and 195 are substantially the same.]

196.S. Gadamsetty*, S. Dong*, J. M. Fitzpatrick, R. J. Maciunas, and R. R. Price, “Correction of geometrical distortion in MRI for stereotaxy”, Proc. Radiological Soc. of N. Amer., Chicago, IL, 223 (Nov 1992).

197.M. Y. Wang*, C. R. Maurer*, Jr., J. M. Fitzpatrick, and R. J. Maciunas, “A knowledge based technique for localizing externally attached markers in MR and CT volume images of the head”, Proc. 15th Annu. Int. Conf. IEEE Eng. Med. Biol. Soc., San Diego, CA 120–121 (Oct 1993).

198.R. Maurer*, Jr., J. M. Fitzpatrick, M. Y. Wang*, and R. J. Maciunas, “Correction of geometrical distortion in MRI image registration”, Proc. 15th

Annu. Int. Conf. IEEE Eng. Med. Biol. Soc., San Diego, CA 122–123 (Oct 1993).

199.R. Maurer*, Jr., J. M. Fitzpatrick, M. Y. Wang*, and R. J. Maciunas, “Estimation of localization accuracy for markers in multimodal volume images”, Proc. 15th Annu. Int. Conf. IEEE Eng. Med. Biol. Soc., San Diego, CA 124–125 (Oct 1993).

200.R. J. Maciunas, C. R. Maurer*, Jr., J. M. Fitzpatrick, M. Y. Wang*, R. L. Galloway, Jr., S. Gadamsetty*, M. S. Berger, B. Copeland, M. R. Mayberg, R. G. Selker, and G. S. Allen, “Implantable fiducial markers to guide neurosurgery”, 1st Intnl. Cong. on Computer Integrated Surgery, Linz, Austria (Sep 1997).

201.R. R. Price, D. R. Pickens, V. L. Morgan, J. M. Fitzpatrick, B. Dawant, A. B. Brill, “Online position tracking for fMRI motion correction”, Radiology, vol. 213P, 581 (Nov 1999).

202.W.C. Lavely, C. Scarfone, H. Cevikalp*, R. Li, D. W. Byrne, A. J. Cmelak, R. R. Price, D. E. Hallahan, J. M. Fitzpatrick, “Phantom validation of coregistration of PET and CT for image-guided radiotherapy”, Ann. Mtg. Radiol. Soc. N. America, Chicago, IL (Nov 2003).

203.R. F. Labadie, D. S. Haynes, M. Fenlon, R. L. Galloway, Jr., J. M. Fitzpatrick, “Image-guided otologic surgery”, Otolaryngology - Head and Neck Surgery, 129, issue 2, 136-137 (August 2003).

204.A. Yoder*, J. M. Fitzpatrick, C. Y. Paschal, C. Gatenby, Y. Zhao, “New method for correction for distortion caused by static-field inhomogeneity in gradient-echo EPI”, Int. Soc. Magnetic Resonance in Medicine, Kyoto, Japan (May 2004).

205.D. A. Yoder*, J. M. Fitzpatrick, C. Y. Paschal, C. Gatenby, “Exact correction of distortions due to static field inhomogeneities in spin echo planar imaging”, Int. Soc. Magnetic Resonance in Medicine, Kyoto, Japan (May 2004).

206.Cetinkaya*, P. D’Haese, C. Kao, P. E. Konrad, J. M. Fitzpatrick, Benoit M. Dawant, “Method for identifying brain nuclei from micro-electrode signals”, ASSFN Neuromodulation 2004: Defining the future, Cleveland, OH (October 2004).

207.M. Warren, R. L Labadie, J. M. Fitzpatrick, “Percutaneous cochlear access using bone-mounted, customized drill guides: Demonstration of concept in vitro”, Amer. Otological Soc. Mtg., Chicago, Ill. (May 2006).

208.B. M. Davis, F. M. Warren, R. Balachandran*, D. M. Kaylie, D. S. Haynes, J. M. Fitzpatrick, R. F. Labadie, “Accuracy of a novel, dental-affixed, non-invasive fiducial system for use during image-

guided, middle cranial fossa surgery in-vitro”, Amer. Otological Soc. Mtg., Chicago, Ill. (May 2006).

209.N. Xu*, Yong Li*, J. M. Fitzpatrick, B. M. Dawant, V. L. Morgan, D. R. Pickens, “Realistic computer generated fMRI phantoms with motion-correlated susceptibility artifacts”, Int . Soc . Magnetic Resonance in Medicine , Seattle, WA (May 2006).

210.Y. Li*, N. Xu*, B. M. Dawant, J. M. Fitzpatrick, V. L. Morgan, D. R. Pickens, “Field map constrained nonrigid registration method for correction of distortions in EP images”, Int . Soc . Magnetic Resonance in Medicine , Seattle, WA (May 2006).

211.Danilchenko*, J. M. Fitzpatrick, O. Majdani, R. F. Labadie, “Laser Outlining of surgical boundaries based on pre-operative radiography”, Conf. Am. Soc. for Laser Medicine and Surgery, Kissimmee, FL (April 2008).

212.R. F. Labadie, R. Balachandran*, J. M. Fitzpatrick, “Accuracy of image-guided surgical systems at the lateral skull base as clinically assessed using bone-anchored hearing aid posts as surgical targets”, Mtg. of Am. Neurotology Soc., Orlando, (May 2008).

213.R. F. Labadie, R. Balachandran, J. Mitchell, J. Noble, O. Majdani, B. M. Dawant, J. M. Fitzpatrick, “Clinical validation study of percutaneous cochlear access using patient-customized, microstereotactic frames”, 2009 AOS/COSM Spring Meeting Scientific Sessions, Phoenix. (May 2009).

214.R. F. Labadie, R. Balachandran, J. Noble, B. Dawant, J. Mitchell, O. Majdani, C. Megerian, M. Bennett, D. S. Haynes, J. M. Fitzpatrick, “Percutaneous cochlear implantation: update on clinical validation experiments,” 12th Symposium on Cochlear Implants in Children, Seattle, Washington (June 2009).

215.R. Balachandran, O. Majdani, J. Noble, J. E. Mitchell, B. M. Dawant, J. M. Fitzpatrick, R. F. Labadie, “Percutaneous cochlear implant drilling via customized frames,” 2009 American Academy of Otolaryngology – Head and Neck Surgery Foundation Annual Meeting & OTO EXPO, San Diego, CA, (Oct 2009).

216.J. Agran, J. E. Mitchell, R. F. Labadie, J. Neimat, J. M. Fitzpatrick, “Use of a novel, rapidly generated custom platform for stereotactic DBS implantation”, 16th Quadrennial Meeting of the World Society for Stereotactic and Functional Neurosurgery, Tokyo, Japan (May 2013).

217.O. Majdani, S. John, Th. S. Rau, G. J. Lexow, R. Labadie, M. Fitzpatrick, R. Balachandran, Th. Lenarz, “The Accuracy of a Mini-Stereotactic Frame for Minimally Invasive Cochlear Implant Surgery”,

13th Intl. Conf. Cochlear Implants and Other Implantable Auditory Technologies, Munich, Germany (June 2014).

Technical Reports

1. J. M. Fitzpatrick, Nonequilibrium gas reaction kinetics: the Grad method and the Chapman-Enskog method, Ph.D. Dissertation, Department of Physics, Advisor Edward A. Desloge, The Florida State University, Tallahassee, FL (Aug 1972).

2. J. M. Fitzpatrick, “Proof of consistent bias in weighted stochastic sampling without replacement”, Technical Report CS87-14, Computer Science Department, Vanderbilt University (Nov 1987).

3. J. M. Fitzpatrick and H. Chang*, “Magnetic resonance imaging with stereotactic accuracy: preliminary results”, Technical Report CS89-11, Computer Science Department, Vanderbilt University (Sep 1989).

4. J. M. Fitzpatrick, C. R. Maurer*, Jr., and J. J. McCrory, “Phantom testing of ACUSTAR I with comparison to stereotaxy”, Technical Report CS94-04, Computer Science Department, Vanderbilt University (Jun 1994).

5. C. R. Maurer*, Jr., J. M. Fitzpatrick, M. Y. Wang*, R. L. Galloway, Jr., R. J. Maciunas, and G. S. Allen, “Registration of head volume images using implantable fiducial markers”, Technical Report CS96-03, Computer Science Department, Vanderbilt University (Sep 1996).