IPlant Data Commons. iPlant Data Commons leverages all elements of our CI to enhance data...

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iPlant Data Commons

Transcript of IPlant Data Commons. iPlant Data Commons leverages all elements of our CI to enhance data...

Page 1: IPlant Data Commons. iPlant Data Commons leverages all elements of our CI to enhance data management, discoverability, and reuse.

iPlant Data Commons

Page 2: IPlant Data Commons. iPlant Data Commons leverages all elements of our CI to enhance data management, discoverability, and reuse.

iPlant Data Commons leverages all elements of our CI to enhance data management,

discoverability, and reuse

Page 3: IPlant Data Commons. iPlant Data Commons leverages all elements of our CI to enhance data management, discoverability, and reuse.

Data Commons

• A data publication platform– with features to enhance data sharing,

discoverability and reuse– with data management/curation functions– to prepare data for ingest to canonical repositories

and or at iPLANT• Integration of information/metadata from

other iPLANT platforms

Page 4: IPlant Data Commons. iPlant Data Commons leverages all elements of our CI to enhance data management, discoverability, and reuse.

Data Commons components:

• existing CI elements (DE, Atmo, Data Store)• metadata “workflow” – automated and manual metadata entry

• cross-platform project and specimen frameworks

• enhanced browse and search capabilities• federation with external data sources

Page 5: IPlant Data Commons. iPlant Data Commons leverages all elements of our CI to enhance data management, discoverability, and reuse.

Metadata dictionary – mapping across existing vocabularies and standards

MIGS INSDC/MIGS

existing ontologies

DataCite DarwinCore

iPlantmetadata

Page 6: IPlant Data Commons. iPlant Data Commons leverages all elements of our CI to enhance data management, discoverability, and reuse.

Publishing from the Data Commons

iPlantmetadata

INSDC/MIGS

DataCite

dataset

publish to INSDC

publish with DOI

Page 7: IPlant Data Commons. iPlant Data Commons leverages all elements of our CI to enhance data management, discoverability, and reuse.

iPlant Data Commons: metadata workflow for the entire data lifecycle

specimen collection

analysis

project creation

publication

data discovery and re-use

Page 8: IPlant Data Commons. iPlant Data Commons leverages all elements of our CI to enhance data management, discoverability, and reuse.

Modular metadata workflow for the entire data lifecycle

project creation

Page 9: IPlant Data Commons. iPlant Data Commons leverages all elements of our CI to enhance data management, discoverability, and reuse.

Modular metadata workflow for the entire data lifecycle

specimencollection

project creation

Page 10: IPlant Data Commons. iPlant Data Commons leverages all elements of our CI to enhance data management, discoverability, and reuse.

Modular metadata workflow for the entire data lifecycle

specimencollection

analysis

project creation

Page 11: IPlant Data Commons. iPlant Data Commons leverages all elements of our CI to enhance data management, discoverability, and reuse.

Modular metadata workflow for the entire data lifecycle

specimencollection

analysis

project creation publication

Page 12: IPlant Data Commons. iPlant Data Commons leverages all elements of our CI to enhance data management, discoverability, and reuse.

Modular metadata workflow for the entire data lifecycle

specimencollection

analysis

project creation publication

data discovery and re-use