Introduction
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13:30 Welcome reception
14:00 Introduction14:05 Investigating the human gut flora using metagenomics (prof. dr. Jeroen
Raes, VUB)14:25 The post-genomic era: epigenetic sequencing applications and data
integration (dr. ir. Maté Ongenaert, CMGG - UGent)14:45 Visualisation of large datasets (drs. Geert Trooskens, BIOBIX - UGent)15:00 Race against the sequencing machine: processing of raw DNA sequence
data at the Genomics Core (dr. Luc Dehaspe, Genomics Core - UZLeuven)
15:20 Coffee break
15:45 Integrative transcriptomics to study non-coding RNA functions (dr. ir. Pieter Mestdagh, CMGG - UGent)
16:05 Large scale machine learning challenges for systems biology (dr. Yvan Saeys, VIB - UGent)
16:25 Pathway analysis: example from the bench (drs. Jolien Vermeire, HIVlab, Department of Clinical Chemistry, Microbiology and
Immunology - UGent)16:40 Proteomics and cross-omics integration (prof. dr. Lennart Maertens (VIB -
UGent)
17:00 Closure
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• BE, NL, FR• UGent, UA, KUL, ULG, ULB, … ILVO, SCK, … (pediatric
immunology, microbiology, medical genetics, computer sciences, physiology, dermatology, plant systems biology, …)
• Applied Math, Bayer Bioscience, Evolved Analytics Europe, Genetwister, Janssens Pharmaceuticals, Roche, …
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• hybrid is leitmotif today- mixed audience in terms of background- speakers• 2 PhD students, 4 postdocs, 2 professors• metagenomics, epigenetics, functional genomics,
proteomics, systems biology• commercial tools vs. open source
• bio-informatics- use informatics to solve biological problems- none of the speakers is a trained bio-informatician
“don’t be afraid to start, just dig in”
• house rules- mute mobile phones- interact – discuss – ask questions
• thank you• Jaspert Anckaert• Pieter Mestdagh• Anneleen Decock• Maté Ongenaert