ICCES'2016 BIG DATA IN HEALTHCARE AND SOCIAL SCIENCES
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Transcript of ICCES'2016 BIG DATA IN HEALTHCARE AND SOCIAL SCIENCES
Big Data in Healthcare and Social Sciences
VICTORIA LÓPEZ
UNIVERSIDAD COMPLUTENSE DE MADRID
Barcelona, Spain, 23-27 July- 2016 1
ICCES’2016International Conference of Computing for Engineering and Sciences
Outline
Healthcare and Social Sciences
Information Privacy
Some projects (as examples)◦ Bronchoopulmonary Dysplaxia
◦ Bipolar disorder
◦ Intelligent Integration of COhorts for a better life of DEMEntia patiens
◦ WAP Madrid
◦ Asperger disorder
The future is coming in 5 years…
Barcelona, Spain, 23-27 July- 2016 2
Healthcare and Social Sciences Everybody, ….. Everybody … is sensible about healthcare.
No discusion about investing money/time/efforts
Clear goals for projects
Prevention vs. Curation (here the money is first)
Personal health: people are able to check their own rates
Healthcare becames a social issue
Barcelona, Spain, 23-27 July- 2016 3
Individual knowledge
Social contributions
Colective knowledge
Social Development
Less effort
More improvements
Healthcare and Social Sciences
Barcelona, Spain, 23-27 July- 2016 4
Individual knowledge
Social contributions
Colective knowledge
Social Development
Less effort
More improvements
Solutions come from predictive analytics
Predictive modeling
Machine learning
Data mining
GOAL: PREVENTION
Heathcare and Big DataIntelligent Data Analytics
Predictive analysis
Clustering
Pattern discovery
Visualization
FINE, www.finenet.nl
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Problem formulation – data exploring – hypothesis formulation – working with data – experimentation – results – iteration
HealthCare and Big DataMost of problems in healthcare are big data issues.
About volume
◦ Nowadays we can collect data all over the world
◦ We are being monitoring! … all the time!
◦ -Accelerometers
◦ -Smartphones
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Heathcare and Big DataMost of problems in healthcare are big data issue
About velocity◦ We need to know the crisis is coming in advance (asap)
◦ Real time must work as real time in real life
About variety◦ Data is unstructured and diverse
◦ Data pre-processing
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Heathcare and Big DataMost of problems in healthcare are big data issues.
About veracity◦ Accuracity is a due!
◦ Not only money but also lifes
◦ Data cleaning and integration
◦ Noise and outlliers must be out of the sample
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Information privacyRelation between:
Data collection –
Data dissemination –
Technology –
Legality –
Public expectation of privacy –
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Information privacyThe challenge of data privacy is tu utilize data while protecting individual’s privacy preferences and their personally identifiable information
- computer security
- data security
- information security
Privacy becomes a big deal when health personal data is involved.
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Information privacyTake into account:
Where storing data (cloud, inHouse, hybrid)
Who is allowed to see the data
How the data can be accessed
Is our project under the law?
New techniques: ◦ Data Anonymization ◦ Cryptography ◦ Disjoin private – public data
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Information privacyData Anonymization
- Encrypting all or part of the data
- Removing sensible data
Personally identifiable information from data sets
Technology that converts clear text data into a nonhuman readable and irreversible form (no de-anonymization)
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Some projects
◦ Bronchoopulmonary Dysplaxia
◦ Bipolar disorder
◦ Intelligent Integration of COhorts for a better life of DEMEntia patiens
◦ Wap Madrid
◦ Asperger disorder
Barcelona, Spain, 23-27 July- 2016 13
BRONCHOPULMONARY DYSPLASIA PULMESCELL & PULMESGEN: GENETIC AND MOLECULAR BIOMARKERS PREDINCTING BRONCHOPULMONARY DYSPLASIA AND THE INDIVIDUAL RESPONSE TO MESENCHYMAL STEM CELL THERAPY
Barcelona, Spain, 23-27 July- 2016 14
BRONCHOPULMONARY DYSPLASIA PULMESCELL & PULMESGEN: GENETIC AND MOLECULAR BIOMARKERS PREDINCTING BRONCHOPULMONARY DYSPLASIA AND THE INDIVIDUAL RESPONSE TO MESENCHYMAL STEM CELL THERAPY
Barcelona, Spain, 23-27 July- 2016 15
BRONCHOPULMONARY DYSPLASIA PULMESCELL & PULMESGEN: GENETIC AND MOLECULAR BIOMARKERS PREDINCTING BRONCHOPULMONARY DYSPLASIA AND THE INDIVIDUAL RESPONSE TO MESENCHYMAL STEM CELL THERAPY
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BRONCHOPULMONARY DYSPLASIA
INGEMM Pablo Lapunzina
INSTITUTE GENETICS HURYCJavier Moreno
STEM CELL PRODUCTIONManuel Ramirez Orellana
Modelos Animales Javier Garcia Castro
La Fe HospitalIP: Max Vento
La Paz HospitalIP: Paloma LópezD Elorza, C labrandero y Marta C.
Clinico HospitalIP: Luis arruza Santiago rueda y Cristina Glez Menchen
Vall d Hebron HospitalIP: Felix castilloAntonio Moreno Galdo (neumo) y Anna sabaté (cardio)
H.U. RAMON Y CAJAL IP: M. Jesús del CerroMaria Álvarez, Cristina Sanchez, E. Garrido
BIG DATA. Grupo GTeC - GRASIA Informática ComplutenseIP: Victoria Lópezy Guadalupe Miñana
Biomarkers
IP: Laura Moreno
Jane Mitchell,
Francisco Vizcaino
COST BENEFIT ANALYSISCSIAT IP: FJ Diaz UNED
CHUAC Hospital (A Coruña)
IP: Alejandro avilaC Blanco
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BIPOLAR DISORDERCAD prediction system for bipolar disorder, a complex mental disorder in which the core feature is disturbance in mood, ranging from extreme elation (mania) to severe depression, accompanied by disturbances in thinking and behaviour.
2% of the world’s population. The disease has substantial consequences both for the individual and for health care spending.
The World Health Organization has identified BD as the sixth leading cause of disability-adjusted life years in the world. In 2009, the direct and indirect costs of BD were estimated to be US$151 billion. In the UK, the estimated national cost of bipolar disorder was £4.59 billion per year. Hospitalisation during acute episodes costs £69 million per year.
Biomedical informatics methods are needed to process data and form recommendations and/or predictions to assist decision makers in the form of computer-aided decision (CAD) support.
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BIPOLAR DISORDER
Victoria López @victoriadematesBarcelona, Spain, 23-27 July- 2016 19
BIPOLAR DISORDER
Table: Patient features and types.
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BIPOLAR DISORDERFigure 1. Hybrid Cloud-inHouse storing and computing
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BIPOLAR DISORDER - team
1 PhD student, 1 Master student, 3 CS students, 3 senior researchers
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H2020: I2-CODEME (Intelligent Integration of COhorts for a better life of DEMEntia patiens)
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I2-CODEME consortium will provide a set of cohorts related with dementia and other neurodegenerative diseases that in particular will improve quality of life of patients by establishing home treatment protocols and it is expected that will decrease by around 20% the costs associated to treatments from the patient point of view.
I2-CODEMEEcosystem
Health&SocialCare
PolicyMakers
Pa ents&
Families
Figure 1. I2-CODEME Ecosystem Actors
H2020: I2-CODEME (Intelligent Integration of COhorts for a better life of DEMEntia patiens)
Barcelona, Spain, 23-27 July- 2016 24
As a result of the methodology applied, I2-CODEME will establish a set of KPIs (key performance indicators) from different perspectives (medical, healthcare, social care, policies).
H2020: I2-CODEME (Intelligent Integration of COhorts for a better life of DEMEntia patiens)
Barcelona, Spain, 23-27 July- 2016 25
Cost associated to early detection of dementia patients
H2020: I2-CODEME (Intelligent Integration of COhorts for a better life of DEMEntia patiens)
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Relationship between different machine learning frameworks
H2020: I2-CODEME (Intelligent Integration of COhorts for a better life of DEMEntia patiens)
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A platform on Open Data. Getting value from healthcare data.
WAP MADRID. WALKING PEOPLE.
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WAP MADRID. WALKING PEOPLE.
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WAP MADRID. WALKING PEOPLE.
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Asperger syndromeAsperger syndrome (AS) is a developmental disorder characterized by significant difficulties in social interaction and nonverbal communication, along with restricted and repetitive patterns of behavior and interests. It is an autism spectrum disorder (ASD) and differs from other disorders by relatively normal language and intelligence.
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Social Big Data
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Big Data in Healthcare and Social Sciences
VICTORIA LÓPEZ
UNIVERSIDAD COMPLUTENSE DE MADRID
Barcelona, Spain, 23-27 July- 2016 33