Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

43
http://www.math.fsu.edu/~quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin

Transcript of Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

Page 1: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

http://www.math.fsu.edu/~quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg

myoglobin

Page 2: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

Double Helix

Page 3: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

Nucleotides: basic molecule of DNA

Pyrimidine

Page 4: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

Nucleotides: basic molecule of DNA

Purine

Page 5: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

Pyrimidines and Purines

Made up of a

1.Sugar (5 carbon)

2.Phosphate group

3.Nitric Base

Page 6: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

DNA Replication

• http://www.johnkyrk.com/DNAreplication.html

Page 7: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.
Page 8: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

Differences between RNA and DNA

• RNA has only a SINGLE Strand (DNA is Double Stranded)

• RNA contains ribose instead of deoxyribose

• RNA polymerase can start the RNA transcription without a primer

Page 9: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

Differences between RNA and DNA

• RNA uses Uracil(U) instead of Thymine(T)• More errors occur in an RNA copy than in DNA

copy of nucleotides (103 more than in DNA)• FACT: DNA has a transcription error

approximately every 107 nucleotides. RNA has an error approximately every 104 !

Page 10: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

Differences between RNA and DNA

• WHY are there more errors in RNA Transcription?

• One of several reasons is that in rare instances Uracil can also bond with Guanine

Page 11: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

Is this a Bad thing?

• WHY are there more errors in RNA Transcription?

• One of several reasons is that in rare instance Uracil can also bond with Guanine

• RNA is a temporary copy in Eukaryotes

Page 12: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

Types of RNA

• mRNA= messenger RNA• codes for a protein

Page 13: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

Types of RNA

• tRNA= transfer RNA• central to protein synthesis as adaptors

between mRNA and amino acids

Page 14: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

Types of RNA

• rRNA= ribosomal RNA• form the basic structure of the ribosome

and catalyze protein synthesis

Page 15: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.
Page 16: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

• Transcription- the synthesis of RNA under DNA (occurs in the nucleus)

• Translation- the actual synthesis of a polypeptide coded for by the mRNA. (changing the base sequence of the mRNA molecule into a chain of amino acids that form a polypeptide. For our purposes a protein.)

Page 17: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

An mRNA copy is made from DNA in the Nucleus

Page 18: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

The DNA strand from which the mRNA is copied is the

TEMPLATE STRAND

Page 19: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

The mRNA leaves the nucleus and enters a ribosome (made up of rRNA)

Page 20: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

tRNA collects a specific amino acids present in the cell and brings it to the ribosome

Page 21: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

The anticodon of the tRNA matches up with its counterpart codon on the mRNA

Page 22: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

When the mRNA & the tRNA link up the amino acid detaches and is connected to the adjacent amino acid

Page 23: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

This chain of amino acids is a protein (polypeptide)

Page 24: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

rRNARibosome

Page 25: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

rRNA mRNA enters the “A” site of the ribosome

Page 26: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

rRNA When the first codon reaches the “P” site the tRNA brings down the amino acid and links up with the mRNA

Page 27: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

rRNA The “E” site is where the amino acid separates form the tRNA and links up to adjacent amino acids. This is where the MRNA and tRNA leave the ribosome

Page 28: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.
Page 29: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

ANTICODONS

Anticodon

•Anticodons specify which amino acid a tRNA collects

•The anticodon then pairs up with its corresponding codon

Page 30: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

ANTICODONS

Anticodon

•So for example...

•The anticodon AGU would pair with the codon UCA.

•THEY ARE OPPOSITES OF EACH OTHER

Page 31: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.
Page 32: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

So What's a codon?

Codon• This basic unit of genetic code is 3

nucleotides long

• It specifies a specific amino acid

• Each codon only specifies 1 amino acid (BUT…an amino acid may have several different codons that code for it)

Page 33: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

http://images.google.com/imgres?imgurl=http://biology.kenyon.edu/courses/biol114/Chap05/trna-1.gif&imgrefurl=http://biology.kenyon.edu/courses/biol114/Chap05/Chapter05.html&h=382&w=283&sz=37&tbnid=G8z7JoxTdy0J:&tbnh=119&tbnw=88&hl=en&start=5&prev=/images%3Fq%3DtRNA%26svnum%3D50%26hl%3Den%26lr%3D%26client%3Dfirefox-a%26rls%3Dorg.mozilla:en-US:official_s%26sa%3DG

Page 34: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

When DNA copies…..

• It copy's in a very specific order. It copies 5’-3’ from a 3’-5’ Template.

Page 35: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.
Page 36: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

• That means the DNA strand is in the following order…

DN

A

Page 37: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

• That means the DNA stand is in the following order…

Page 38: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

• That means the DNA stand is in the following order…

Page 39: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

• That means the DNA stand is in the following order…

Page 40: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

• That means the DNA stand is in the following order…

Page 41: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

• That means the DNA stand is in the following order…

Page 42: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

THE END

http://www.chemistry.emory.edu/faculty/lynn/research/dna/template.gif

Page 43: Http://quine/IntroMathBio_04/Proteins/myoglobin_geis.jpg myoglobin.

Where credit is due• http://homepages.strath.ac.uk/~dfs97113/BB310/img002.jpg• http://fig.cox.miami.edu/~cmallery/150/gene/16x5bc.jpg• http://opbs.okstate.edu/~petracek/Chapter%2027%20Figures/Fig

%2027-08a.GIF• http://imglib.lbl.gov/ImgLib/COLLECTIONS/BERKELEY-LAB/

RESEARCH-1991-PRESENT/LIFE-SCIENCES/images/96703355.lowres.jpeg

• http://www.umanitoba.ca/afs/plant_science/COURSES/CYTO/l12/replication.gif

• http://www.accessexcellence.org/RC/VL/GG/images/rna.gif• http://ghs.gresham.k12.or.us/science/ps/sci/ibbio/chem/notes/

chpt14/pyrimidine.gif• http://www.daviddarling.info/images/uracil.jpg• http://www.carolguze.com/images/cellorganelles/ribosome.jpg• http://perso.wanadoo.fr/marxiens/sciences/codons.jpg