GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data”...
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GOA Retrospective analysisModel use: hypothesis testing
• The system, the stories, and the “data”• The model: Elseas; like Ecosim but
more flexible for our purposes • The simple and clear hypotheses: what
drives species trends in the GOA?– It’s fishing– It’s climate (the PDO)– It’s everyone eating shrimp– It’s complicated…
Walleye pollock, Theragra chalcogramma
0
1,000,000
2,000,000
3,000,000
4,000,000
1960
1970
1980
1990
2000
year
biom
ass
(t)
stock assessment
trawl survey
euphausiids
copepods
euphausiids
shrimp
Juvenile diet
Adult diet
Pacific cod, Gadus macrocephalus
0
200,000
400,000
600,000
800,000
1960
1970
1980
1990
2000
year
biom
ass
(t)
stock assessment
trawl survey
pollock
benthic amphipods
shrimp bairdi
shrimp
Juvenile diet
Adult diet
pollock
Juvenile diet
shrimp
hermitcrabs
Pacific halibut, Hippoglossus stenolepis
0
200,000
400,000
600,000
800,000
196
0
197
0
198
0
199
0
200
0
year
bio
mas
s (t
)
stock assessment
trawl survey
Adult diet
Arrowtooth flounder, Atherestes stomias
0
500,000
1,000,000
1,500,000
2,000,000
1960
1970
1980
1990
2000
year
biom
ass
(t)
stock assessment
trawl survey
euphausiids
pollock
Juvenile diet
Adult diet
capelin
capelin
0
1,000,000
2,000,000
3,000,000
4,000,000
1960
1970
1980
1990
2000
year
biom
ass
(t)
PollockP. codArrowtoothHalibut
1990-1993 snapshot
Mass balance to dynamic simulation
BP/BQ/BDCEE
CatchBA
Bioenergetics and mass accounting
M2GEM0q
Vul
(Bstart)
Population rates (total mortality is
key)
Equilibrium built here, perturbed here
Alternate stable states possible??Alternate stable states possible??
ModelingRecruitment
– A delay-difference equation with juveniles divided into monthly pools:
• Fixed age at recruitment
• Adjustable relationship between food intake and fecundity
– Knife edge recruitment to fishery, spawning, and ontogenetic diet switch.
– Spawning biomass is not directly comparable to stock assessments (because stock assessments vary).
• “Surplus” production (compensation) is an absolute requirement for sustainable single-species fishing. As biomass decreases, production per biomass must increase.
• This can happen in more than one way…
0
0.1
0.2
0.3
0.4
0.5
0.6
0.7
0.8
0.9
1
0 1 2 3 4 5 6
Predator Biomass
Pre
dat
or
Pro
du
ctio
n/B
iom
ass
P/B (Age-structured von Bertalanffy)
P/B (Ecosim foraging risk)
Model structure: alternative myths
• In von Bertalanffy (vB) models (MSVPA, single species), fishing compensation comes from increasing growth rates (conversion efficiency) of relatively younger fish in a fished population.
• In Ecosim, compensation comes from increased per-capita consumption: all at the expense of other species.
• By definition, in Ecosim there is no true energetic “surplus,” it all comes from other species. Conversely, in vB models there is no “bottom up control.”
0
0.1
0.2
0.3
0.4
0.5
0.6
0 1 2 3 4 5 6
Predator Biomass
Pre
da
tor
gro
wth
eff
icie
nc
y
Growth efficiency (Age-structured von Bertalanffy)
Growth efficiency (Ecosim foraging risk)
Alternative myths II
Forcing alone (no fitting of Ecosim parameters) in the Northern California Current (Field 2004):
This run is forced by NPZ output time series (1967-1998) and fishing mortality derived from catches and stock assessments
Forcing: fishing only (big 4)
Forcing (Fishery) Fit to Catch Fit to Biomass
Fitting with fishing only, but add 60’s POP fishery
Forcing (Fishery)
Fit to Catch
Fit to Biomass
Fitting using fishing only—all GOA time series
Fitting using fishing, pollock recruitment—all series
Fitting using fishing and all recruitment—all series
Summary…
• Can’t explain system dynamics (species trends)– with fishing alone (unlike in other, more heavily
fished systems)– with simple climate (PDO) forcing of primary
production
• Reproducing “known” groundfish dynamics – OK when forcing with stock assessment “data”
• Recruitment variability dominates this system?
Predictive Process: predict, communicate, use
• Between Prediction and Use– What ought to be predicted?– How are predictions actually used?
• Between Prediction and Communication– What does the prediction mean in operational
terms?– How reliable is the prediction, and how is
uncertainty conveyed?
• Between Use and Communication– What information is needed by the decision maker?– What content or form of communication leads to
the desired response?
Predictive Potential
• Single Species Stock Assessment Model– Unknown parameters fit using data, updated annually– Predict direct effects of fishing on target populations– Quantitative prediction, 1-2 years out
• Ecosystem Model– Predict direct effects of fishing on nontarget species– Predict indirect effects of fishing mediated by trophic
interactions– Predict consequences of ecosystem changes not
related to fishing, therefore beyond our control– Qualitative predictions, must incorporate uncertainty
Data requirements in a simple food web
Biomass (B)Population growth rate
or Production (P/B)Consumption (Q/B)Diet comp (DC)
For ALL groups!!
Alternative: solve for B assuming a fixed proportion of production is used in the system:“top down balance”
• Each systematically added group adds constraints as well as data requirements, does one outweigh the other?
Too complex—uncertainty overwhelms?
GOA data pedigree
Base arrowtooth trajectory
0
5
10
15
20
25
2004 2014 2024 2034 2044 2054year
ton
s/k
m^
2
baseGOA_1000 Arrowtooth_Adu
Results: “Base trophic uncertainty”
• Bars show 95% confidence interval for year-50 biomasses in accepted ecosystems; symbols show varied assumptions of functional responses
• Limited confidence of exactly where system will be in 50 years, but patterns do emerge...
-200%
0%
200%
400%
600%
800%
1000%
Tra
nsie
nt
kill
e
Sle
eper
shark
s
Salm
on s
hark
s
Tooth
ed w
hale
s
Ste
llar
sea lio
Oth
er
rockfish
Skate
s
Seals
Pacific
halib
ut
Macro
uridae
Arr
ow
tooth
fl.
Pis
c.
birds
Pacific
cod
Spin
y d
ogfish
Sculp
ins
Cephalo
pods
Bale
en w
hale
s
Sable
fish
Short
raker/
roug
Thorn
yheads
pollo
ck (
all)
oth
er
dem
ers
al
PO
P/n
ort
hern
/du
Jelly
fish
SM
ALL
Pacific
herr
ing
Salm
on
osm
eridae
Hexagra
mm
idae
Zoarc
idae
sandla
nce
bath
ypela
gic
s
C.
bairdi
C.
opili
o
Kin
g c
rab
Shrim
p
EP
IFA
UN
A
LA
RG
E Z
OO
P
INF
AU
NA
Benth
ic A
mph.
Copepods
Ocean p
roductio
Phyto
pla
nkto
n
baseStd
med
Predicting trophically mediated fishing effects (and level of control in
a system):Try to fish out arrowtooth?
• What effect would a “magic” arrowtooth reduction have?
• What might a real increase in targeting of arrowtooth look like?
• Different tradeoffs…
Fish out arrowtooth “magically”
0
2
4
6
8
10
12
2004 2014 2024 2034 2044 2054year
ton
s/km
^2
magicATF_FisM_1000 Arrowtooth_Adu
Scenario difference from base
-120
-100
-80
-60
-40
-20
0
2004 2014 2024 2034 2044 2054
year
Pe
rce
nt
ch
an
ge
magicATF_FisM_1000lessBase Arrowtooth_Adu
Fish out arrowtooth “magically” (F on arrowtooth increases with no
bycatch)
-1
0
1
2
3
4
5
Her
ring_
Adu
W. P
ollo
ck_A
du
Arr
owto
oth_
Adu
Sab
lefis
h_A
du
Atk
a_A
du
Sle
eper
Sha
rks
Arr
owto
oth_
Juv
Res
iden
t sea
ls
Eel
pout
s
Wes
t S.S
.L_J
uv
Wes
t S.S
.L_A
du
P. C
od_A
du
Gre
enlin
gs
P. H
alib
ut_A
du
Sal
mon
Sha
rks
Her
ring_
Juv
Cen
tral
S.S
.L._
Juv
Oth
er S
ebas
tes
Oth
er s
culp
ins
Cen
tral
S.S
.L._
Adu
Sea
Sta
r
Pric
kle
squi
sh d
eep
Scy
pho
Jelli
es
Oth
er M
acru
ids
Rou
ghey
e R
ock
Dov
er S
ole
Sho
rtra
ker
Roc
k
Gia
nt G
rena
dier
Pac
ific
Gre
nadi
er
Cap
elin
Offa
l
W. P
ollo
ck_J
uv
N. F
ur. S
eal_
Adu
Mys
id
N. F
ur. S
eal_
Juv
Dus
ky R
ock
NP
shr
imp
Fis
h La
rvae
Sho
rtsp
ine
Tho
rns_
Juv
Pan
dalid
ae
Median
Fish out arrowtooth “realistically”(increase flatfish fishery q for
arrowtooth)
-1
0
1
2
3
4
5
Her
ring_
Adu
Dis
card
s
W. P
ollo
ck_A
du
Arro
wto
oth_
Adu
N. R
ock
sole
Dov
er S
ole
Atka
_Adu
Mis
c. F
latfi
sh
Sabl
efis
h_Ad
u
S. R
ock
sole
Slee
per S
hark
s
Shor
tspi
ne T
horn
s_Ad
u
Arro
wto
oth_
Juv
Eelp
outs
Res
iden
t sea
ls
Bath
yraj
a m
acul
ata
(Whi
tebl
otch
ed)
Raj
a rh
ina
(Lon
gnos
ed s
kate
) Offa
l
Rex
Sol
e
Wes
t S.S
.L_A
du
Wes
t S.S
.L_J
uv
Pric
kle
squi
sh d
eep
Bath
yraj
a in
teru
pta
(Ber
ing
skat
e)
Shor
trak
er R
ock
Rou
ghey
e R
ock
Gre
enlin
gs
Raj
a bi
nocu
lata
(Big
ska
te)
P. C
od_A
du
King
Cra
b
Her
ring_
Juv
P. H
alib
ut_A
du
Salm
on S
hark
s
Oth
er S
ebas
tes
Oth
er M
acru
ids
Shor
tspi
ne T
horn
s_Ju
v
Gia
nt G
rena
dier
Cen
tral
S.S
.L._
Juv
Cen
tral
S.S
.L._
Adu
Bath
yraj
a Al
eutic
a (A
leut
ian
skat
e)
Sea
Star
Median
Predicting fishing effects on nontarget species
• Can we use knowledge of some system components to learn about effects of fishing on nontarget species?
• Apply the same method to “small” Gulf of Alaska model…
• Perturbations are new: stop fishing, increase fishing on all, increase target fishing to MSY levels for major groundfish
No fishing (top), 2xF (bottom)
-200%
0%
200%
400%
600%
800%
1000%
Tra
nsie
nt
kill
e
Sle
eper
shark
s
Salm
on s
hark
s
Tooth
ed w
hale
s
Ste
llar
sea lio
Oth
er
rockfish
Skate
s
Seals
Pacific
halib
ut
Macro
uridae
Arr
ow
tooth
fl.
Pis
c.
birds
Pacific
cod
Spin
y d
ogfish
Sculp
ins
Cephalo
pods
Bale
en w
hale
s
Sable
fish
Short
raker/
roug
Thorn
yheads
pollo
ck (
all)
oth
er
dem
ers
al
PO
P/n
ort
hern
/du
Jelly
fish
SM
ALL
Pacific
herr
ing
Salm
on
osm
eridae
Hexagra
mm
idae
Zoarc
idae
sandla
nce
bath
ypela
gic
s
C.
bairdi
C.
opili
o
Kin
g c
rab
Shrim
p
EP
IFA
UN
A
LA
RG
E Z
OO
P
INF
AU
NA
Benth
ic A
mph.
Copepods
Ocean p
roductio
Phyto
pla
nkto
n
noFlessBase
median
-400%
-300%
-200%
-100%
0%
100%
200%
Tra
nsie
nt
kill
e
Sle
eper
shark
s
Salm
on s
hark
s
Tooth
ed w
hale
s
Ste
llar
sea lio
Oth
er
rockfish
Skate
s
Seals
Pacific
halib
ut
Macro
uridae
Arr
ow
tooth
fl.
Pis
c.
birds
Pacific
cod
Spin
y d
ogfish
Sculp
ins
Cephalo
pods
Bale
en w
hale
s
Sable
fish
Short
raker/
roug
Thorn
yheads
pollo
ck (
all)
oth
er
dem
ers
al
PO
P/n
ort
hern
/du
Jelly
fish
SM
ALL
Pacific
herr
ing
Salm
on
osm
eridae
Hexagra
mm
idae
Zoarc
idae
sandla
nce
bath
ypela
gic
s
C.
bairdi
C.
opili
o
Kin
g c
rab
Shrim
p
EP
IFA
UN
A
LA
RG
E Z
OO
P
INF
AU
NA
Benth
ic A
mph.
Copepods
Ocean p
roductio
Phyto
pla
nkto
n
2FlessBase
median
Predicting effects beyond our control
• Changes in species or group production• Evaluate system structure, relative
predictabilityGOA
-50%
-40%
-30%
-20%
-10%
0%
10%
20%
30%
40%
50%
W. P
ollo
ck
W. P
ollo
ck_J
uv
P. H
alib
ut
Ste
ller
Sea
Lio
n
Res
iden
t sea
ls
Ste
ller
Sea
Lio
n_Ju
v
Offa
l
Rou
ghey
e R
ock
Sho
rtra
ker
Roc
k
FH
. Sol
e
Sho
rtsp
ine
Tho
rns
Gre
enlin
gs
Mis
c. fi
sh s
hallo
w
Gre
nadi
ers
Sho
rtsp
ine
Tho
rns_
Juv
Species affected by a 10% increase in W. Pollock production
Per
cen
t ch
ang
e in
eq
uil
ibru
im p
rod
uct
ion
EBS
-50%
-40%
-30%
-20%
-10%
0%
10%
20%
30%
40%
50%
Ala
ska
ska
te
P. H
alib
ut
Offa
l
Sa
ble
fish
Oth
er
ska
tes
Sh
ort
rake
r R
ock
Re
sid
en
t Kill
ers
Ka
mch
atk
a fl
.
W. P
ollo
ck
Win
teri
ng
se
als
He
rrin
g
Ka
mch
atk
a fl
._Ju
v
Ste
ller
Se
a L
ion
Ste
ller
Se
aL
ion
_Ju
v
P. C
od
Species affected by a 10% increase in W. Pollock production
Per
cen
t ch
ang
e in
eq
uil
ibri
um
pro
du
ctio
n
Conclusions
• Predictive potential?– Most powerful when considering uncertainty– Error bars incorporate both data quality and
predictability– Direction of change a robust indicator– The GOA and the EBS may have different levels of
predictive potential—useful information for management
• Implications for policy– Keep active policy options for changing fishing
mortality– Explore new policy options for preparing for the
unexpected (system change will happen)
Discussion: What controls recruitment variability?
• Ideas:– The difference between the single species
models’ recruitment predictions and the ecosystem model’s may reflect the effect of predation
– So, these models can measure the proportion of recruitment variability due to trophic effects
• Next step:– Fit to series of diet composition to identify prey
switching, quantify mortality due to predation– Time series of low trophic level production
would help—output from NPZ model as in NCC
Discussion: When does fishing matter?
• Is there a threshold where dynamics switch from “recruitment dominated” to “fishing dominated”?– How much fishing, and on whom?– Is threshold dependent on system characteristics?
• The tradeoff:– Cross the line, and you can explain dynamics– Stay below it but live with low predictive power– Either way you may have less fish!!
• The policy implications…