GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data”...

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GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our purposes The simple and clear hypotheses: what drives species trends in the GOA? It’s fishing It’s climate (the PDO) It’s everyone eating shrimp It’s complicated…

Transcript of GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data”...

Page 1: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.

GOA Retrospective analysisModel use: hypothesis testing

• The system, the stories, and the “data”• The model: Elseas; like Ecosim but

more flexible for our purposes • The simple and clear hypotheses: what

drives species trends in the GOA?– It’s fishing– It’s climate (the PDO)– It’s everyone eating shrimp– It’s complicated…

Page 2: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.

Walleye pollock, Theragra chalcogramma

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biom

ass

(t)

stock assessment

trawl survey

euphausiids

copepods

euphausiids

shrimp

Juvenile diet

Adult diet

Page 3: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.

Pacific cod, Gadus macrocephalus

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ass

(t)

stock assessment

trawl survey

pollock

benthic amphipods

shrimp bairdi

shrimp

Juvenile diet

Adult diet

Page 4: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.

pollock

Juvenile diet

shrimp

hermitcrabs

Pacific halibut, Hippoglossus stenolepis

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trawl survey

Adult diet

Page 5: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.

Arrowtooth flounder, Atherestes stomias

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biom

ass

(t)

stock assessment

trawl survey

euphausiids

pollock

Juvenile diet

Adult diet

capelin

capelin

Page 6: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.

0

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biom

ass

(t)

PollockP. codArrowtoothHalibut

1990-1993 snapshot

Page 7: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.

Mass balance to dynamic simulation

BP/BQ/BDCEE

CatchBA

Bioenergetics and mass accounting

M2GEM0q

Vul

(Bstart)

Population rates (total mortality is

key)

Equilibrium built here, perturbed here

Alternate stable states possible??Alternate stable states possible??

Page 8: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.

ModelingRecruitment

– A delay-difference equation with juveniles divided into monthly pools:

• Fixed age at recruitment

• Adjustable relationship between food intake and fecundity

– Knife edge recruitment to fishery, spawning, and ontogenetic diet switch.

– Spawning biomass is not directly comparable to stock assessments (because stock assessments vary).

Page 9: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.

• “Surplus” production (compensation) is an absolute requirement for sustainable single-species fishing. As biomass decreases, production per biomass must increase.

• This can happen in more than one way…

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Predator Biomass

Pre

dat

or

Pro

du

ctio

n/B

iom

ass

P/B (Age-structured von Bertalanffy)

P/B (Ecosim foraging risk)

Model structure: alternative myths

Page 10: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.

• In von Bertalanffy (vB) models (MSVPA, single species), fishing compensation comes from increasing growth rates (conversion efficiency) of relatively younger fish in a fished population.

• In Ecosim, compensation comes from increased per-capita consumption: all at the expense of other species.

• By definition, in Ecosim there is no true energetic “surplus,” it all comes from other species. Conversely, in vB models there is no “bottom up control.”

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Predator Biomass

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da

tor

gro

wth

eff

icie

nc

y

Growth efficiency (Age-structured von Bertalanffy)

Growth efficiency (Ecosim foraging risk)

Alternative myths II

Page 11: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.

Forcing alone (no fitting of Ecosim parameters) in the Northern California Current (Field 2004):

This run is forced by NPZ output time series (1967-1998) and fishing mortality derived from catches and stock assessments

Page 12: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.

Forcing: fishing only (big 4)

Forcing (Fishery) Fit to Catch Fit to Biomass

Page 13: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.

Fitting with fishing only, but add 60’s POP fishery

Forcing (Fishery)

Fit to Catch

Fit to Biomass

Page 14: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.

Fitting using fishing only—all GOA time series

Page 15: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.

Fitting using fishing, pollock recruitment—all series

Page 16: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.

Fitting using fishing and all recruitment—all series

Page 17: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.

Summary…

• Can’t explain system dynamics (species trends)– with fishing alone (unlike in other, more heavily

fished systems)– with simple climate (PDO) forcing of primary

production

• Reproducing “known” groundfish dynamics – OK when forcing with stock assessment “data”

• Recruitment variability dominates this system?

Page 18: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.
Page 19: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.

Predictive Process: predict, communicate, use

• Between Prediction and Use– What ought to be predicted?– How are predictions actually used?

• Between Prediction and Communication– What does the prediction mean in operational

terms?– How reliable is the prediction, and how is

uncertainty conveyed?

• Between Use and Communication– What information is needed by the decision maker?– What content or form of communication leads to

the desired response?

Page 20: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.

Predictive Potential

• Single Species Stock Assessment Model– Unknown parameters fit using data, updated annually– Predict direct effects of fishing on target populations– Quantitative prediction, 1-2 years out

• Ecosystem Model– Predict direct effects of fishing on nontarget species– Predict indirect effects of fishing mediated by trophic

interactions– Predict consequences of ecosystem changes not

related to fishing, therefore beyond our control– Qualitative predictions, must incorporate uncertainty

Page 21: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.

Data requirements in a simple food web

Biomass (B)Population growth rate

or Production (P/B)Consumption (Q/B)Diet comp (DC)

For ALL groups!!

Alternative: solve for B assuming a fixed proportion of production is used in the system:“top down balance”

Page 22: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.

• Each systematically added group adds constraints as well as data requirements, does one outweigh the other?

Too complex—uncertainty overwhelms?

Page 23: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.

GOA data pedigree

Page 24: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.

Base arrowtooth trajectory

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2004 2014 2024 2034 2044 2054year

ton

s/k

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baseGOA_1000 Arrowtooth_Adu

Page 25: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.

Results: “Base trophic uncertainty”

• Bars show 95% confidence interval for year-50 biomasses in accepted ecosystems; symbols show varied assumptions of functional responses

• Limited confidence of exactly where system will be in 50 years, but patterns do emerge...

-200%

0%

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1000%

Tra

nsie

nt

kill

e

Sle

eper

shark

s

Salm

on s

hark

s

Tooth

ed w

hale

s

Ste

llar

sea lio

Oth

er

rockfish

Skate

s

Seals

Pacific

halib

ut

Macro

uridae

Arr

ow

tooth

fl.

Pis

c.

birds

Pacific

cod

Spin

y d

ogfish

Sculp

ins

Cephalo

pods

Bale

en w

hale

s

Sable

fish

Short

raker/

roug

Thorn

yheads

pollo

ck (

all)

oth

er

dem

ers

al

PO

P/n

ort

hern

/du

Jelly

fish

SM

ALL

Pacific

herr

ing

Salm

on

osm

eridae

Hexagra

mm

idae

Zoarc

idae

sandla

nce

bath

ypela

gic

s

C.

bairdi

C.

opili

o

Kin

g c

rab

Shrim

p

EP

IFA

UN

A

LA

RG

E Z

OO

P

INF

AU

NA

Benth

ic A

mph.

Copepods

Ocean p

roductio

Phyto

pla

nkto

n

baseStd

med

Page 26: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.

Predicting trophically mediated fishing effects (and level of control in

a system):Try to fish out arrowtooth?

• What effect would a “magic” arrowtooth reduction have?

• What might a real increase in targeting of arrowtooth look like?

• Different tradeoffs…

Page 27: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.

Fish out arrowtooth “magically”

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ton

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magicATF_FisM_1000 Arrowtooth_Adu

Page 28: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.

Scenario difference from base

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2004 2014 2024 2034 2044 2054

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Pe

rce

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an

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magicATF_FisM_1000lessBase Arrowtooth_Adu

Page 29: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.

Fish out arrowtooth “magically” (F on arrowtooth increases with no

bycatch)

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Her

ring_

Adu

W. P

ollo

ck_A

du

Arr

owto

oth_

Adu

Sab

lefis

h_A

du

Atk

a_A

du

Sle

eper

Sha

rks

Arr

owto

oth_

Juv

Res

iden

t sea

ls

Eel

pout

s

Wes

t S.S

.L_J

uv

Wes

t S.S

.L_A

du

P. C

od_A

du

Gre

enlin

gs

P. H

alib

ut_A

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Sal

mon

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rks

Her

ring_

Juv

Cen

tral

S.S

.L._

Juv

Oth

er S

ebas

tes

Oth

er s

culp

ins

Cen

tral

S.S

.L._

Adu

Sea

Sta

r

Pric

kle

squi

sh d

eep

Scy

pho

Jelli

es

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er M

acru

ids

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ghey

e R

ock

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ole

Sho

rtra

ker

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k

Gia

nt G

rena

dier

Pac

ific

Gre

nadi

er

Cap

elin

Offa

l

W. P

ollo

ck_J

uv

N. F

ur. S

eal_

Adu

Mys

id

N. F

ur. S

eal_

Juv

Dus

ky R

ock

NP

shr

imp

Fis

h La

rvae

Sho

rtsp

ine

Tho

rns_

Juv

Pan

dalid

ae

Median

Page 30: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.

Fish out arrowtooth “realistically”(increase flatfish fishery q for

arrowtooth)

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Her

ring_

Adu

Dis

card

s

W. P

ollo

ck_A

du

Arro

wto

oth_

Adu

N. R

ock

sole

Dov

er S

ole

Atka

_Adu

Mis

c. F

latfi

sh

Sabl

efis

h_Ad

u

S. R

ock

sole

Slee

per S

hark

s

Shor

tspi

ne T

horn

s_Ad

u

Arro

wto

oth_

Juv

Eelp

outs

Res

iden

t sea

ls

Bath

yraj

a m

acul

ata

(Whi

tebl

otch

ed)

Raj

a rh

ina

(Lon

gnos

ed s

kate

) Offa

l

Rex

Sol

e

Wes

t S.S

.L_A

du

Wes

t S.S

.L_J

uv

Pric

kle

squi

sh d

eep

Bath

yraj

a in

teru

pta

(Ber

ing

skat

e)

Shor

trak

er R

ock

Rou

ghey

e R

ock

Gre

enlin

gs

Raj

a bi

nocu

lata

(Big

ska

te)

P. C

od_A

du

King

Cra

b

Her

ring_

Juv

P. H

alib

ut_A

du

Salm

on S

hark

s

Oth

er S

ebas

tes

Oth

er M

acru

ids

Shor

tspi

ne T

horn

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v

Gia

nt G

rena

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tral

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tral

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Bath

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a Al

eutic

a (A

leut

ian

skat

e)

Sea

Star

Median

Page 31: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.

Predicting fishing effects on nontarget species

• Can we use knowledge of some system components to learn about effects of fishing on nontarget species?

• Apply the same method to “small” Gulf of Alaska model…

• Perturbations are new: stop fishing, increase fishing on all, increase target fishing to MSY levels for major groundfish

Page 32: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.

No fishing (top), 2xF (bottom)

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Tra

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kill

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Sle

eper

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Salm

on s

hark

s

Tooth

ed w

hale

s

Ste

llar

sea lio

Oth

er

rockfish

Skate

s

Seals

Pacific

halib

ut

Macro

uridae

Arr

ow

tooth

fl.

Pis

c.

birds

Pacific

cod

Spin

y d

ogfish

Sculp

ins

Cephalo

pods

Bale

en w

hale

s

Sable

fish

Short

raker/

roug

Thorn

yheads

pollo

ck (

all)

oth

er

dem

ers

al

PO

P/n

ort

hern

/du

Jelly

fish

SM

ALL

Pacific

herr

ing

Salm

on

osm

eridae

Hexagra

mm

idae

Zoarc

idae

sandla

nce

bath

ypela

gic

s

C.

bairdi

C.

opili

o

Kin

g c

rab

Shrim

p

EP

IFA

UN

A

LA

RG

E Z

OO

P

INF

AU

NA

Benth

ic A

mph.

Copepods

Ocean p

roductio

Phyto

pla

nkto

n

noFlessBase

median

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200%

Tra

nsie

nt

kill

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Sle

eper

shark

s

Salm

on s

hark

s

Tooth

ed w

hale

s

Ste

llar

sea lio

Oth

er

rockfish

Skate

s

Seals

Pacific

halib

ut

Macro

uridae

Arr

ow

tooth

fl.

Pis

c.

birds

Pacific

cod

Spin

y d

ogfish

Sculp

ins

Cephalo

pods

Bale

en w

hale

s

Sable

fish

Short

raker/

roug

Thorn

yheads

pollo

ck (

all)

oth

er

dem

ers

al

PO

P/n

ort

hern

/du

Jelly

fish

SM

ALL

Pacific

herr

ing

Salm

on

osm

eridae

Hexagra

mm

idae

Zoarc

idae

sandla

nce

bath

ypela

gic

s

C.

bairdi

C.

opili

o

Kin

g c

rab

Shrim

p

EP

IFA

UN

A

LA

RG

E Z

OO

P

INF

AU

NA

Benth

ic A

mph.

Copepods

Ocean p

roductio

Phyto

pla

nkto

n

2FlessBase

median

Page 33: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.

Predicting effects beyond our control

• Changes in species or group production• Evaluate system structure, relative

predictabilityGOA

-50%

-40%

-30%

-20%

-10%

0%

10%

20%

30%

40%

50%

W. P

ollo

ck

W. P

ollo

ck_J

uv

P. H

alib

ut

Ste

ller

Sea

Lio

n

Res

iden

t sea

ls

Ste

ller

Sea

Lio

n_Ju

v

Offa

l

Rou

ghey

e R

ock

Sho

rtra

ker

Roc

k

FH

. Sol

e

Sho

rtsp

ine

Tho

rns

Gre

enlin

gs

Mis

c. fi

sh s

hallo

w

Gre

nadi

ers

Sho

rtsp

ine

Tho

rns_

Juv

Species affected by a 10% increase in W. Pollock production

Per

cen

t ch

ang

e in

eq

uil

ibru

im p

rod

uct

ion

EBS

-50%

-40%

-30%

-20%

-10%

0%

10%

20%

30%

40%

50%

Ala

ska

ska

te

P. H

alib

ut

Offa

l

Sa

ble

fish

Oth

er

ska

tes

Sh

ort

rake

r R

ock

Re

sid

en

t Kill

ers

Ka

mch

atk

a fl

.

W. P

ollo

ck

Win

teri

ng

se

als

He

rrin

g

Ka

mch

atk

a fl

._Ju

v

Ste

ller

Se

a L

ion

Ste

ller

Se

aL

ion

_Ju

v

P. C

od

Species affected by a 10% increase in W. Pollock production

Per

cen

t ch

ang

e in

eq

uil

ibri

um

pro

du

ctio

n

Page 34: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.

Conclusions

• Predictive potential?– Most powerful when considering uncertainty– Error bars incorporate both data quality and

predictability– Direction of change a robust indicator– The GOA and the EBS may have different levels of

predictive potential—useful information for management

• Implications for policy– Keep active policy options for changing fishing

mortality– Explore new policy options for preparing for the

unexpected (system change will happen)

Page 35: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.

Discussion: What controls recruitment variability?

• Ideas:– The difference between the single species

models’ recruitment predictions and the ecosystem model’s may reflect the effect of predation

– So, these models can measure the proportion of recruitment variability due to trophic effects

• Next step:– Fit to series of diet composition to identify prey

switching, quantify mortality due to predation– Time series of low trophic level production

would help—output from NPZ model as in NCC

Page 36: GOA Retrospective analysis Model use: hypothesis testing The system, the stories, and the “data” The model: Elseas; like Ecosim but more flexible for our.

Discussion: When does fishing matter?

• Is there a threshold where dynamics switch from “recruitment dominated” to “fishing dominated”?– How much fishing, and on whom?– Is threshold dependent on system characteristics?

• The tradeoff:– Cross the line, and you can explain dynamics– Stay below it but live with low predictive power– Either way you may have less fish!!

• The policy implications…