GMOD MeetingOICRJuly 16-17, 2008

Scott Cain

GMOD Project Coordinator

Cold Spring Harbor Laboratory

Good stuff since the last meeting

gmod 1.0! A few Apollo releases cmap 1.0 GMOD summer school Community Annotation System 1.0 ParameciumDB annotation jamboree Arthropod Genomics meeting

What's in GMOD 1.0

Materialized views (thanks SGN) Ontology updates (thanks again SGN) Stock module (thanks ParameciumDB) Improved GFF loading Delete by GFF

What's on tap for GMOD 1.1

No schema changes (yet) Minor Apollo compatibility stuff (although

that problem's already been fixed by Ed) Minor fix to GFF3 preprocessing tools

CAS 1.1

For 1.1, a release of CAS-utils 0.1: Apollo-GBrowse CGI using a conf file An installer (MB?) to make it pretty

Why CAS-utils 0.1? Summer school convinced me both of the

need and feasibility

GMODWeb

GMOD Summer School

July 11-13 at NESCent (North Carolina) 25 students, 4 instructors High level of competence (students) Covered: Chado theory and practice,

GBrowse, Apollo, CMap, CAS Generally good reviews

What's up for this meeting

Talk about core GMOD/CAS components: GBrowse, Apollo, MediaWiki

GMOD help desk stuff InterMine Common Gene Pages (again)

Without further adieu..